BLASTX nr result

ID: Zingiber25_contig00032012 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00032012
         (556 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006836804.1| hypothetical protein AMTR_s00099p00026630 [A...    84   2e-14
ref|XP_003572624.1| PREDICTED: probable serine/threonine-protein...    65   1e-08
ref|XP_002526427.1| Serine/threonine-protein kinase cdk9, putati...    64   2e-08
gb|EMJ26375.1| hypothetical protein PRUPE_ppa002233mg [Prunus pe...    63   5e-08
gb|EOX97002.1| Serine/threonine-protein kinase cdk9 [Theobroma c...    62   9e-08
ref|XP_006385063.1| hypothetical protein POPTR_0004s23550g [Popu...    60   3e-07
ref|XP_002328792.1| predicted protein [Populus trichocarpa]            60   3e-07
ref|XP_002264491.2| PREDICTED: probable serine/threonine-protein...    57   3e-06

>ref|XP_006836804.1| hypothetical protein AMTR_s00099p00026630 [Amborella trichopoda]
           gi|548839368|gb|ERM99657.1| hypothetical protein
           AMTR_s00099p00026630 [Amborella trichopoda]
          Length = 730

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 58/129 (44%), Positives = 72/129 (55%), Gaps = 16/129 (12%)
 Frame = +2

Query: 29  RAAERSSESVRTHNWDSRATPAPE--------VQNPLGNANPKSISGKYNKQ-DGEGSGF 181
           RAA   ++SV   + +SRA PAP+        VQ    N+ PKS S KYN Q D  GSGF
Sbjct: 460 RAAGEKADSVSKASRESRAVPAPDANAELPSSVQKRQANSKPKSSSEKYNPQADDVGSGF 519

Query: 182 LMELPGGP----LHNVFSHAG--MHPNAFDSTWTKR-SQEPLSHASSRTYSSMRVSNDPQ 340
           LME PGGP      N FSH+G  MHPNA+ S+W+K+  +E +  A +R     R   DP 
Sbjct: 520 LMEPPGGPAGGTAQNGFSHSGSLMHPNAYGSSWSKKPKEEEVRLAPNREGGGAR---DPN 576

Query: 341 LRTQMLCRP 367
           LRTQ    P
Sbjct: 577 LRTQRSYMP 585


>ref|XP_003572624.1| PREDICTED: probable serine/threonine-protein kinase At1g54610-like
           [Brachypodium distachyon]
          Length = 733

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 47/140 (33%), Positives = 60/140 (42%), Gaps = 11/140 (7%)
 Frame = +2

Query: 80  RATPAPEV--------QNPLGNANPKSISGKYNKQDGEGSGFLMELPGGPLHNVFSHAGM 235
           +A PA E         Q      N KS S  Y   +   +GF ME P  P  +       
Sbjct: 516 KAAPAQEAIGVDHQRRQQAAARVNTKSSSHHYTALEDSVAGFRMEPPAAPAPSTMQMQMQ 575

Query: 236 HPNAFDSTWTKRSQEPLSHASSRTYSSMRVSNDP---QLRTQMLCRPNQSGADFSGISDS 406
               F STW ++ +        RT SS+RVSN P    L +Q  C P++ G D   +  S
Sbjct: 576 SAGQFGSTWYRKDEHHQRGGMKRTTSSLRVSNLPVAHHLTSQRSCAPSRGGTD---LHPS 632

Query: 407 FAARGNAGSKGNRLDGGEPA 466
            +A  N  SK NRLD  EPA
Sbjct: 633 SSAVRNTNSKYNRLDVAEPA 652


>ref|XP_002526427.1| Serine/threonine-protein kinase cdk9, putative [Ricinus communis]
           gi|223534207|gb|EEF35922.1| Serine/threonine-protein
           kinase cdk9, putative [Ricinus communis]
          Length = 506

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 52/153 (33%), Positives = 74/153 (48%), Gaps = 12/153 (7%)
 Frame = +2

Query: 11  KMRLGDRAAERSSESVRTHNWDSRATPAPE--------VQNPLGNANPKSISGKYNKQDG 166
           + R G     R  ES R ++  S+A PAP+        +Q   G +NPKSIS ++N ++ 
Sbjct: 235 RRRRGHGGKGRGHESARKNSRVSKAVPAPDANAELLASIQKRQGQSNPKSISEQFNPEEV 294

Query: 167 EGSGFLMELPGGPLHNVFSHAG--MHPNAFDST--WTKRSQEPLSHASSRTYSSMRVSND 334
            GSGF    P G   NV+SH+G  MHP    S+   T    E L   S + +SS + +  
Sbjct: 295 GGSGFPTVPPEGTTRNVYSHSGKSMHPTNHGSSRGMTANETEAL-RTSGQAFSSPKKTE- 352

Query: 335 PQLRTQMLCRPNQSGADFSGISDSFAARGNAGS 433
            +L TQ         A  S  S+S A RG++ S
Sbjct: 353 -ELTTQR-SFTQWGAAQLSRFSNSVAVRGSSNS 383


>gb|EMJ26375.1| hypothetical protein PRUPE_ppa002233mg [Prunus persica]
          Length = 698

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 42/123 (34%), Positives = 60/123 (48%), Gaps = 10/123 (8%)
 Frame = +2

Query: 11  KMRLGDRAAERSSESVRTHNWDSRATPAPEVQ--NPLGNANPKSISGKYNKQDGEGSGFL 184
           K+R  +    R+  S    + +S+A PAP+       G  NPKSIS KYN  +  GSGF 
Sbjct: 444 KLRDEEARRRRAPGSKGGSSKESKAVPAPDANAIQRQGQPNPKSISEKYNPDEDSGSGFP 503

Query: 185 MELPGGPLHNVFSHAG--MHPNAFDSTWTKRSQEPLSHASSRTY------SSMRVSNDPQ 340
           +E P G   N +S++G  MHPNAF S+          +   ++Y       S R SN   
Sbjct: 504 IEPPKGATSNGYSYSGQSMHPNAFGSSRNMSQSGQSRNGGEKSYMYRGAAQSSRFSNSAS 563

Query: 341 LRT 349
           +R+
Sbjct: 564 VRS 566


>gb|EOX97002.1| Serine/threonine-protein kinase cdk9 [Theobroma cacao]
          Length = 748

 Score = 62.0 bits (149), Expect = 9e-08
 Identities = 47/135 (34%), Positives = 71/135 (52%), Gaps = 11/135 (8%)
 Frame = +2

Query: 56  VRTHNWDSRATPAPE--------VQNPLGNANPKSISGKYNKQDGEGSGFLMELPGGPLH 211
           VR  + +S A PAP+        +Q   G  N KSIS  ++ ++  G+GF +E P G   
Sbjct: 487 VRKVSRESTAVPAPDANAELQASIQKRQGQFNTKSISEVHHPEEDRGAGFRIEPPKGTAR 546

Query: 212 NVFSHAG--MHPNAFDSTWTKRSQEPLS-HASSRTYSSMRVSNDPQLRTQMLCRPNQSGA 382
            V+SH+G  MHPN F S+   ++ E  S  AS+R + S R     +LRTQ     ++   
Sbjct: 547 VVYSHSGQSMHPNNFGSSRNMKAHEIESMKASARAFGSPR--KPEELRTQ-TTYVHRGAV 603

Query: 383 DFSGISDSFAARGNA 427
           + S  S+S A RG++
Sbjct: 604 ELSRFSNSVAVRGSS 618


>ref|XP_006385063.1| hypothetical protein POPTR_0004s23550g [Populus trichocarpa]
           gi|550341831|gb|ERP62860.1| hypothetical protein
           POPTR_0004s23550g [Populus trichocarpa]
          Length = 704

 Score = 60.5 bits (145), Expect = 3e-07
 Identities = 44/143 (30%), Positives = 69/143 (48%), Gaps = 10/143 (6%)
 Frame = +2

Query: 41  RSSESVRTHNWDSRATPAPE--------VQNPLGNANPKSISGKYNKQDGEGSGFLMELP 196
           R  ES R  + +S+A PAP+        +Q   G +N  SIS +YN ++  GSG+ +   
Sbjct: 456 RGHESTRRSSKESKAVPAPDANAELQASIQKRQGQSNQISISEQYNHEEDGGSGYPIGPA 515

Query: 197 GGPLHNVFSHAG--MHPNAFDSTWTKRSQEPLSHASSRTYSSMRVSNDPQLRTQMLCRPN 370
            G   NV+SH+G  MHP  F S+      +    A S+ + S R + +   +   +    
Sbjct: 516 KGTTRNVYSHSGQSMHPTNFGSSRNMNINDAALRAPSQDFISPRQTAELSAQRSFV---- 571

Query: 371 QSGADFSGISDSFAARGNAGSKG 439
           Q  A  S  S+S A RG++  +G
Sbjct: 572 QREAVLSRFSNSVAVRGDSHFQG 594


>ref|XP_002328792.1| predicted protein [Populus trichocarpa]
          Length = 257

 Score = 60.5 bits (145), Expect = 3e-07
 Identities = 44/143 (30%), Positives = 69/143 (48%), Gaps = 10/143 (6%)
 Frame = +2

Query: 41  RSSESVRTHNWDSRATPAPE--------VQNPLGNANPKSISGKYNKQDGEGSGFLMELP 196
           R  ES R  + +S+A PAP+        +Q   G +N  SIS +YN ++  GSG+ +   
Sbjct: 9   RGHESTRRSSKESKAVPAPDANAELQASIQKRQGQSNQISISEQYNHEEDGGSGYPIGPA 68

Query: 197 GGPLHNVFSHAG--MHPNAFDSTWTKRSQEPLSHASSRTYSSMRVSNDPQLRTQMLCRPN 370
            G   NV+SH+G  MHP  F S+      +    A S+ + S R + +   +   +    
Sbjct: 69  KGTTRNVYSHSGQSMHPTNFGSSRNMNINDAALRAPSQDFISPRQTAELSAQRSFV---- 124

Query: 371 QSGADFSGISDSFAARGNAGSKG 439
           Q  A  S  S+S A RG++  +G
Sbjct: 125 QREAVLSRFSNSVAVRGDSHFQG 147


>ref|XP_002264491.2| PREDICTED: probable serine/threonine-protein kinase At1g54610-like
           [Vitis vinifera] gi|297739502|emb|CBI29684.3| unnamed
           protein product [Vitis vinifera]
          Length = 741

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 47/149 (31%), Positives = 72/149 (48%), Gaps = 11/149 (7%)
 Frame = +2

Query: 41  RSSESVRTHNWDSRATPAPE--------VQNPLGNANPKSISGKYNKQDGEGSGFLMELP 196
           R  ES R  + +S+A PAP+        +Q     +NPKS S K+  ++  GSGF +E  
Sbjct: 475 RGHESTRKVSRESKAVPAPDANAELQVSIQKRREQSNPKSKSEKFIPEEDGGSGFPIEPT 534

Query: 197 GGPLHNVFSHAG--MHPNAFDSTWTKR-SQEPLSHASSRTYSSMRVSNDPQLRTQMLCRP 367
            G   N FSH+G  +HP AF S      +++       R  +S R  N  +LR Q     
Sbjct: 535 KGTTRNGFSHSGKSIHPTAFGSARNMDVNEDEAQMGPGRGSNSSR--NGAELRIQK-SYS 591

Query: 368 NQSGADFSGISDSFAARGNAGSKGNRLDG 454
           ++ G+  S  S S A +G++    +R +G
Sbjct: 592 HRGGSQLSMFSGSVAVQGSSRFDNDRENG 620


Top