BLASTX nr result
ID: Zingiber25_contig00031999
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00031999
(240 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ACR38556.1| unknown [Zea mays] gi|413945770|gb|AFW78419.1| hy... 80 4e-13
ref|NP_001143211.1| uncharacterized protein LOC100275714 [Zea ma... 80 4e-13
gb|AAW56871.1| unknown protein [Oryza sativa Japonica Group] gi|... 79 6e-13
ref|NP_001174469.1| Os05g0481800 [Oryza sativa Japonica Group] g... 79 6e-13
gb|EEC79413.1| hypothetical protein OsI_20368 [Oryza sativa Indi... 79 6e-13
dbj|BAG94848.1| unnamed protein product [Oryza sativa Japonica G... 79 6e-13
ref|XP_002439972.1| hypothetical protein SORBIDRAFT_09g023670 [S... 78 1e-12
ref|XP_004961719.1| PREDICTED: pentatricopeptide repeat-containi... 73 3e-11
ref|XP_006654552.1| PREDICTED: pentatricopeptide repeat-containi... 71 1e-10
ref|XP_003566565.1| PREDICTED: pentatricopeptide repeat-containi... 67 2e-09
dbj|BAK07992.1| predicted protein [Hordeum vulgare subsp. vulgare] 64 2e-08
ref|XP_006594863.1| PREDICTED: pentatricopeptide repeat-containi... 57 3e-06
ref|XP_003543355.1| PREDICTED: pentatricopeptide repeat-containi... 57 3e-06
gb|ACU20132.1| unknown [Glycine max] 57 3e-06
>gb|ACR38556.1| unknown [Zea mays] gi|413945770|gb|AFW78419.1| hypothetical protein
ZEAMMB73_401277 [Zea mays]
Length = 377
Score = 79.7 bits (195), Expect = 4e-13
Identities = 38/80 (47%), Positives = 54/80 (67%)
Frame = +1
Query: 1 SKLSPDIISYKKVAQTLERVSDSNVICDFVKDVSDITSCTDCTVINRIIYTAAKLGMIDK 180
S+L+PD SY VA L+++ D +I FV+++ +IT D TV+NRII+ AK G IDK
Sbjct: 145 SELTPDSTSYMNVALALQKLDDCEMILKFVREILEITHSRDATVMNRIIFATAKYGHIDK 204
Query: 181 SLMIFEVLKNHHLKMDTITF 240
SL+IFE LK + +D +TF
Sbjct: 205 SLVIFEELKKYETSLDVVTF 224
>ref|NP_001143211.1| uncharacterized protein LOC100275714 [Zea mays]
gi|195615844|gb|ACG29752.1| hypothetical protein [Zea
mays]
Length = 377
Score = 79.7 bits (195), Expect = 4e-13
Identities = 38/80 (47%), Positives = 54/80 (67%)
Frame = +1
Query: 1 SKLSPDIISYKKVAQTLERVSDSNVICDFVKDVSDITSCTDCTVINRIIYTAAKLGMIDK 180
S+L+PD SY VA L+++ D +I FV+++ +IT D TV+NRII+ AK G IDK
Sbjct: 145 SELTPDSTSYMNVALALQKLDDCELILKFVREILEITHSRDATVMNRIIFATAKYGHIDK 204
Query: 181 SLMIFEVLKNHHLKMDTITF 240
SL+IFE LK + +D +TF
Sbjct: 205 SLVIFEELKKYETSLDVVTF 224
>gb|AAW56871.1| unknown protein [Oryza sativa Japonica Group]
gi|222631991|gb|EEE64123.1| hypothetical protein
OsJ_18955 [Oryza sativa Japonica Group]
Length = 433
Score = 79.0 bits (193), Expect = 6e-13
Identities = 38/80 (47%), Positives = 54/80 (67%)
Frame = +1
Query: 1 SKLSPDIISYKKVAQTLERVSDSNVICDFVKDVSDITSCTDCTVINRIIYTAAKLGMIDK 180
SK++PD+ SY VA+ L+++ D +I FV+ V +IT D TV+NRI++T AK G IDK
Sbjct: 157 SKIAPDLTSYTNVAKALQKLDDYELILKFVRQVMEITHDRDPTVMNRIVFTTAKYGQIDK 216
Query: 181 SLMIFEVLKNHHLKMDTITF 240
L+IFE LK +D +TF
Sbjct: 217 CLIIFEELKKDQRGLDVVTF 236
>ref|NP_001174469.1| Os05g0481800 [Oryza sativa Japonica Group]
gi|255676452|dbj|BAH93197.1| Os05g0481800 [Oryza sativa
Japonica Group]
Length = 438
Score = 79.0 bits (193), Expect = 6e-13
Identities = 38/80 (47%), Positives = 54/80 (67%)
Frame = +1
Query: 1 SKLSPDIISYKKVAQTLERVSDSNVICDFVKDVSDITSCTDCTVINRIIYTAAKLGMIDK 180
SK++PD+ SY VA+ L+++ D +I FV+ V +IT D TV+NRI++T AK G IDK
Sbjct: 157 SKIAPDLTSYTNVAKALQKLDDYELILKFVRQVMEITHDRDPTVMNRIVFTTAKYGQIDK 216
Query: 181 SLMIFEVLKNHHLKMDTITF 240
L+IFE LK +D +TF
Sbjct: 217 CLIIFEELKKDQRGLDVVTF 236
>gb|EEC79413.1| hypothetical protein OsI_20368 [Oryza sativa Indica Group]
Length = 433
Score = 79.0 bits (193), Expect = 6e-13
Identities = 38/80 (47%), Positives = 54/80 (67%)
Frame = +1
Query: 1 SKLSPDIISYKKVAQTLERVSDSNVICDFVKDVSDITSCTDCTVINRIIYTAAKLGMIDK 180
SK++PD+ SY VA+ L+++ D +I FV+ V +IT D TV+NRI++T AK G IDK
Sbjct: 157 SKIAPDLTSYTNVAKALQKLDDYELILKFVRQVMEITHDRDPTVMNRIVFTTAKYGQIDK 216
Query: 181 SLMIFEVLKNHHLKMDTITF 240
L+IFE LK +D +TF
Sbjct: 217 CLIIFEELKKDQRGLDVVTF 236
>dbj|BAG94848.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215766880|dbj|BAG99108.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 389
Score = 79.0 bits (193), Expect = 6e-13
Identities = 38/80 (47%), Positives = 54/80 (67%)
Frame = +1
Query: 1 SKLSPDIISYKKVAQTLERVSDSNVICDFVKDVSDITSCTDCTVINRIIYTAAKLGMIDK 180
SK++PD+ SY VA+ L+++ D +I FV+ V +IT D TV+NRI++T AK G IDK
Sbjct: 157 SKIAPDLTSYTNVAKALQKLDDYELILKFVRQVMEITHDRDPTVMNRIVFTTAKYGQIDK 216
Query: 181 SLMIFEVLKNHHLKMDTITF 240
L+IFE LK +D +TF
Sbjct: 217 CLIIFEELKKDQRGLDVVTF 236
>ref|XP_002439972.1| hypothetical protein SORBIDRAFT_09g023670 [Sorghum bicolor]
gi|241945257|gb|EES18402.1| hypothetical protein
SORBIDRAFT_09g023670 [Sorghum bicolor]
Length = 377
Score = 78.2 bits (191), Expect = 1e-12
Identities = 38/80 (47%), Positives = 55/80 (68%)
Frame = +1
Query: 1 SKLSPDIISYKKVAQTLERVSDSNVICDFVKDVSDITSCTDCTVINRIIYTAAKLGMIDK 180
SKL+PD SY VA+ L+++ D +I FV+++ +IT D TV+NRII+ A+ G IDK
Sbjct: 145 SKLAPDSTSYMNVAKALQKLDDCELILKFVRELLEITHHRDPTVMNRIIFATAQYGHIDK 204
Query: 181 SLMIFEVLKNHHLKMDTITF 240
SL+IFE LK + +D +TF
Sbjct: 205 SLVIFEELKKYQTSLDVVTF 224
>ref|XP_004961719.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11900-like isoform X1 [Setaria italica]
Length = 379
Score = 73.2 bits (178), Expect = 3e-11
Identities = 38/80 (47%), Positives = 54/80 (67%)
Frame = +1
Query: 1 SKLSPDIISYKKVAQTLERVSDSNVICDFVKDVSDITSCTDCTVINRIIYTAAKLGMIDK 180
SKL+PD SY VA+ L+++ + +I FV+++ +IT D TV+NRII+ AK G IDK
Sbjct: 148 SKLAPDSTSYMNVAKALQKLDECELILKFVREILEITQNRDPTVMNRIIFATAKYGDIDK 207
Query: 181 SLMIFEVLKNHHLKMDTITF 240
SL+IFE LK +D +TF
Sbjct: 208 SLIIFEELKKDR-TLDVVTF 226
>ref|XP_006654552.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11900-like [Oryza brachyantha]
Length = 338
Score = 71.2 bits (173), Expect = 1e-10
Identities = 36/80 (45%), Positives = 52/80 (65%)
Frame = +1
Query: 1 SKLSPDIISYKKVAQTLERVSDSNVICDFVKDVSDITSCTDCTVINRIIYTAAKLGMIDK 180
SK++PD+ SYK VA+ L+ + + +I FV+ +IT D TV+N II+ AK G IDK
Sbjct: 101 SKIAPDLTSYKNVAKALQTLDEYELILKFVRQTLEITHDRDPTVMNCIIFAMAKYGHIDK 160
Query: 181 SLMIFEVLKNHHLKMDTITF 240
SL+IF+ LK +D +TF
Sbjct: 161 SLIIFKELKKDQRGLDVVTF 180
>ref|XP_003566565.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11900-like [Brachypodium distachyon]
Length = 371
Score = 67.0 bits (162), Expect = 2e-09
Identities = 33/80 (41%), Positives = 51/80 (63%)
Frame = +1
Query: 1 SKLSPDIISYKKVAQTLERVSDSNVICDFVKDVSDITSCTDCTVINRIIYTAAKLGMIDK 180
SK +PD+ SY VA+ L + D ++ FV+++ +IT TV+NRII+ A + G IDK
Sbjct: 139 SKAAPDLTSYMYVARALGDLEDPELMLKFVREILEITHGRGPTVVNRIIFAAGRYGHIDK 198
Query: 181 SLMIFEVLKNHHLKMDTITF 240
SL++F+ LK +D +TF
Sbjct: 199 SLIMFQELKRDQRCLDVVTF 218
>dbj|BAK07992.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 361
Score = 63.9 bits (154), Expect = 2e-08
Identities = 31/80 (38%), Positives = 49/80 (61%)
Frame = +1
Query: 1 SKLSPDIISYKKVAQTLERVSDSNVICDFVKDVSDITSCTDCTVINRIIYTAAKLGMIDK 180
SK +PD+ SY VA+ + + DS ++ FV++V +IT+ TV NRI++ G +DK
Sbjct: 128 SKAAPDLTSYMCVARAIGGLDDSELLLGFVREVLEITNGRGPTVANRIVFAVGTYGHLDK 187
Query: 181 SLMIFEVLKNHHLKMDTITF 240
L++FE LK +D +TF
Sbjct: 188 CLIVFEELKKDRRCLDVVTF 207
>ref|XP_006594863.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11900-like isoform X2 [Glycine max]
Length = 329
Score = 57.0 bits (136), Expect = 3e-06
Identities = 29/77 (37%), Positives = 46/77 (59%)
Frame = +1
Query: 10 SPDIISYKKVAQTLERVSDSNVICDFVKDVSDITSCTDCTVINRIIYTAAKLGMIDKSLM 189
SP S K AQ +V+D + F++++S+IT + + IN+II+ AK G DKSL+
Sbjct: 100 SPSATSCLKFAQAFSKVNDCVELLRFLEEISEITCSSTSSFINKIIFAFAKCGQRDKSLV 159
Query: 190 IFEVLKNHHLKMDTITF 240
IF+ LK +D +T+
Sbjct: 160 IFDHLKRQGYGLDLVTY 176
>ref|XP_003543355.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11900-like isoform X1 [Glycine max]
Length = 366
Score = 57.0 bits (136), Expect = 3e-06
Identities = 29/77 (37%), Positives = 46/77 (59%)
Frame = +1
Query: 10 SPDIISYKKVAQTLERVSDSNVICDFVKDVSDITSCTDCTVINRIIYTAAKLGMIDKSLM 189
SP S K AQ +V+D + F++++S+IT + + IN+II+ AK G DKSL+
Sbjct: 137 SPSATSCLKFAQAFSKVNDCVELLRFLEEISEITCSSTSSFINKIIFAFAKCGQRDKSLV 196
Query: 190 IFEVLKNHHLKMDTITF 240
IF+ LK +D +T+
Sbjct: 197 IFDHLKRQGYGLDLVTY 213
>gb|ACU20132.1| unknown [Glycine max]
Length = 276
Score = 57.0 bits (136), Expect = 3e-06
Identities = 29/77 (37%), Positives = 46/77 (59%)
Frame = +1
Query: 10 SPDIISYKKVAQTLERVSDSNVICDFVKDVSDITSCTDCTVINRIIYTAAKLGMIDKSLM 189
SP S K AQ +V+D + F++++S+IT + + IN+II+ AK G DKSL+
Sbjct: 137 SPSATSCLKFAQAFSKVNDCVELLRFLEEISEITCSSTSSFINKIIFAFAKCGQRDKSLV 196
Query: 190 IFEVLKNHHLKMDTITF 240
IF+ LK +D +T+
Sbjct: 197 IFDHLKRQGYGLDLVTY 213