BLASTX nr result
ID: Zingiber25_contig00031896
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00031896
(560 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004953712.1| PREDICTED: PHD finger protein At3g20280-like... 74 2e-11
ref|XP_004953711.1| PREDICTED: PHD finger protein At3g20280-like... 74 2e-11
gb|AFW73153.1| putative RING zinc finger domain superfamily prot... 71 2e-10
gb|EEE57696.1| hypothetical protein OsJ_08170 [Oryza sativa Japo... 69 6e-10
gb|AFW63710.1| putative RING zinc finger domain superfamily prot... 69 8e-10
gb|AFW63708.1| putative RING zinc finger domain superfamily prot... 69 8e-10
gb|AFW63707.1| putative RING zinc finger domain superfamily prot... 69 8e-10
dbj|BAD12870.1| bactericidal permeability-increasing protein-lik... 69 1e-09
ref|NP_001152330.1| DNA binding protein [Zea mays] gi|195655233|... 67 2e-09
ref|XP_003572880.1| PREDICTED: uncharacterized protein LOC100846... 67 3e-09
ref|XP_004251904.1| PREDICTED: uncharacterized protein LOC101263... 64 3e-08
emb|CBI26704.3| unnamed protein product [Vitis vinifera] 63 4e-08
gb|EAY87316.1| hypothetical protein OsI_08720 [Oryza sativa Indi... 63 6e-08
ref|XP_006344876.1| PREDICTED: uncharacterized protein LOC102590... 62 7e-08
ref|XP_006648996.1| PREDICTED: PHD finger protein At3g20280-like... 61 2e-07
gb|ESW14341.1| hypothetical protein PHAVU_008G272900g [Phaseolus... 60 5e-07
ref|XP_004965321.1| PREDICTED: uncharacterized protein LOC101774... 59 8e-07
ref|XP_004965320.1| PREDICTED: uncharacterized protein LOC101774... 59 8e-07
ref|XP_004965319.1| PREDICTED: uncharacterized protein LOC101774... 59 8e-07
ref|XP_003617651.1| PHD finger protein [Medicago truncatula] gi|... 59 8e-07
>ref|XP_004953712.1| PREDICTED: PHD finger protein At3g20280-like isoform X2 [Setaria
italica]
Length = 760
Score = 74.3 bits (181), Expect = 2e-11
Identities = 67/180 (37%), Positives = 87/180 (48%), Gaps = 3/180 (1%)
Frame = -1
Query: 560 AEARERLVVMCE--AVRPKELFSTEAVRVVAEDLGLNRSKDP-ALGFRPPKMSIAXXXXX 390
AEARERL AVRPK+LF EAVR V EDLGLNR+KDP A+GFRPPK SIA
Sbjct: 55 AEARERLAAAVAEGAVRPKDLFPGEAVRAVVEDLGLNRAKDPAAMGFRPPKASIADRLML 114
Query: 389 XXXXXXXXXEINEHSSVHSPLRYPVSAGVKSESRGTMAYGASRFSQDKSSMLTXXXXXXX 210
E +V +P + VS G+ +E G GAS+F
Sbjct: 115 TKRKMEEVKEAPVQPTVSTP-QTAVSTGM-AEFHG--FNGASKFG-------------VG 157
Query: 209 XXXXSHVPVLASAAPNLKQSQINDVQAGANTIKYSSGSLDRALPPEHNGPAYLIRDQVEN 30
V +A+ +P S + G++ +K + S ALP H GP++L D+ N
Sbjct: 158 VPRNPQVAAVAATSPLTSTSPVVLKPPGSSPVKPVANSSGVALP--HTGPSHLKLDKDVN 215
>ref|XP_004953711.1| PREDICTED: PHD finger protein At3g20280-like isoform X1 [Setaria
italica]
Length = 761
Score = 74.3 bits (181), Expect = 2e-11
Identities = 67/180 (37%), Positives = 87/180 (48%), Gaps = 3/180 (1%)
Frame = -1
Query: 560 AEARERLVVMCE--AVRPKELFSTEAVRVVAEDLGLNRSKDP-ALGFRPPKMSIAXXXXX 390
AEARERL AVRPK+LF EAVR V EDLGLNR+KDP A+GFRPPK SIA
Sbjct: 55 AEARERLAAAVAEGAVRPKDLFPGEAVRAVVEDLGLNRAKDPAAMGFRPPKASIADRLML 114
Query: 389 XXXXXXXXXEINEHSSVHSPLRYPVSAGVKSESRGTMAYGASRFSQDKSSMLTXXXXXXX 210
E +V +P + VS G+ +E G GAS+F
Sbjct: 115 TKRKMEEVKEAPVQPTVSTP-QTAVSTGM-AEFHG--FNGASKFG-------------VG 157
Query: 209 XXXXSHVPVLASAAPNLKQSQINDVQAGANTIKYSSGSLDRALPPEHNGPAYLIRDQVEN 30
V +A+ +P S + G++ +K + S ALP H GP++L D+ N
Sbjct: 158 VPRNPQVAAVAATSPLTSTSPVVLKPPGSSPVKPVANSSGVALP--HTGPSHLKLDKDVN 215
>gb|AFW73153.1| putative RING zinc finger domain superfamily protein isoform 1 [Zea
mays] gi|413938603|gb|AFW73154.1| putative RING zinc
finger domain superfamily protein isoform 2 [Zea mays]
Length = 727
Score = 70.9 bits (172), Expect = 2e-10
Identities = 70/203 (34%), Positives = 93/203 (45%), Gaps = 29/203 (14%)
Frame = -1
Query: 560 AEARERLVVMCE--AVRPKELFSTEAVRVVAEDLGLNRSKDP-ALGFRPPKMSIAXXXXX 390
AEARE L AVRPK+LFS EAVR V EDLGLNR+KDP A+GFRPPK SIA
Sbjct: 60 AEARETLAAAVAEGAVRPKDLFSVEAVRAVVEDLGLNRAKDPAAMGFRPPKASIADRLML 119
Query: 389 XXXXXXXXXEINEHSSVHSPLRYPVSAGVKSESRGTMAYGASRF-----------SQDKS 243
E S+V +P + VS+G+ S+ G GA++F S S
Sbjct: 120 TKRKMEEVKEAPVQSTVSAP-QTVVSSGM-SDFHG--LNGATKFGVGVPRDPPVPSITAS 175
Query: 242 SMLTXXXXXXXXXXXSH----------VPVLASAAPNLKQSQ-----INDVQAGANTIKY 108
+ LT S VPVL S NLK + +N GA +
Sbjct: 176 APLTSTSPATLKPPESFPVKPVSNSSVVPVLYSGPSNLKSDKNVSGPLNLAHTGATVVHS 235
Query: 107 SSGSLDRALPPEHNGPAYLIRDQ 39
+ ++D + N ++++Q
Sbjct: 236 NKSTVDASARSSVNASNQMVKNQ 258
>gb|EEE57696.1| hypothetical protein OsJ_08170 [Oryza sativa Japonica Group]
Length = 817
Score = 69.3 bits (168), Expect = 6e-10
Identities = 65/189 (34%), Positives = 84/189 (44%), Gaps = 17/189 (8%)
Frame = -1
Query: 560 AEARERL--VVMCEAVRPKELFSTEAVRVVAEDLGLNRSKDP-ALGFRPPKMSIAXXXXX 390
AEARERL VV AVRPK+LF EAVR + EDLGLNR++DP A+GFRPPK SIA
Sbjct: 61 AEARERLAAVVTEGAVRPKDLFPGEAVRALVEDLGLNRARDPAAMGFRPPKASIADRLML 120
Query: 389 XXXXXXXXXEINEHSSVHSPLRYPVSAGVKSESRGTMAY----GASRFSQDKSSMLTXXX 222
+ E SP++ S S GT + GA +F+ L
Sbjct: 121 TKRKKTAHVLMEEVK--ESPVQPTTSTAQTITSSGTADFQGFHGAPKFAVGVPRNLPA-- 176
Query: 221 XXXXXXXXSHVPVLASAAPNLKQSQINDVQAGANTIKYSSGSLDRALP---PEH------ 69
V L + AP S + G++ +K + +P P H
Sbjct: 177 ----------VAALPATAPVTSASLVTLKPPGSSPVKSVNNPSVVTMPHMAPSHLKSDKG 226
Query: 68 -NGPAYLIR 45
NGP L+R
Sbjct: 227 VNGPPNLVR 235
>gb|AFW63710.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 161
Score = 68.9 bits (167), Expect = 8e-10
Identities = 40/55 (72%), Positives = 42/55 (76%), Gaps = 3/55 (5%)
Frame = -1
Query: 560 AEARERLV--VMCEAVRPKELFSTEAVRVVAEDLGLNRSKDP-ALGFRPPKMSIA 405
AEARE L V AVRPK+LF EAVR V EDLGLNRSKDP A+GFRPPK SIA
Sbjct: 62 AEARETLATAVAERAVRPKDLFPGEAVRAVVEDLGLNRSKDPAAMGFRPPKASIA 116
>gb|AFW63708.1| putative RING zinc finger domain superfamily protein isoform 1 [Zea
mays] gi|413923777|gb|AFW63709.1| putative RING zinc
finger domain superfamily protein isoform 2 [Zea mays]
Length = 806
Score = 68.9 bits (167), Expect = 8e-10
Identities = 40/55 (72%), Positives = 42/55 (76%), Gaps = 3/55 (5%)
Frame = -1
Query: 560 AEARERLV--VMCEAVRPKELFSTEAVRVVAEDLGLNRSKDP-ALGFRPPKMSIA 405
AEARE L V AVRPK+LF EAVR V EDLGLNRSKDP A+GFRPPK SIA
Sbjct: 62 AEARETLATAVAERAVRPKDLFPGEAVRAVVEDLGLNRSKDPAAMGFRPPKASIA 116
>gb|AFW63707.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 775
Score = 68.9 bits (167), Expect = 8e-10
Identities = 40/55 (72%), Positives = 42/55 (76%), Gaps = 3/55 (5%)
Frame = -1
Query: 560 AEARERLV--VMCEAVRPKELFSTEAVRVVAEDLGLNRSKDP-ALGFRPPKMSIA 405
AEARE L V AVRPK+LF EAVR V EDLGLNRSKDP A+GFRPPK SIA
Sbjct: 62 AEARETLATAVAERAVRPKDLFPGEAVRAVVEDLGLNRSKDPAAMGFRPPKASIA 116
>dbj|BAD12870.1| bactericidal permeability-increasing protein-like [Oryza sativa
Japonica Group]
Length = 864
Score = 68.6 bits (166), Expect = 1e-09
Identities = 39/55 (70%), Positives = 44/55 (80%), Gaps = 3/55 (5%)
Frame = -1
Query: 560 AEARERL--VVMCEAVRPKELFSTEAVRVVAEDLGLNRSKDP-ALGFRPPKMSIA 405
AEARERL VV AVRPK+LF EAVR + EDLGLNR++DP A+GFRPPK SIA
Sbjct: 61 AEARERLAAVVTEGAVRPKDLFPGEAVRALVEDLGLNRARDPAAMGFRPPKASIA 115
>ref|NP_001152330.1| DNA binding protein [Zea mays] gi|195655233|gb|ACG47084.1| DNA
binding protein [Zea mays]
Length = 161
Score = 67.4 bits (163), Expect = 2e-09
Identities = 39/55 (70%), Positives = 42/55 (76%), Gaps = 3/55 (5%)
Frame = -1
Query: 560 AEARERLV--VMCEAVRPKELFSTEAVRVVAEDLGLNRSKDP-ALGFRPPKMSIA 405
AEARE L V AVRP++LF EAVR V EDLGLNRSKDP A+GFRPPK SIA
Sbjct: 62 AEARETLATAVAERAVRPEDLFPGEAVRAVVEDLGLNRSKDPAAMGFRPPKASIA 116
>ref|XP_003572880.1| PREDICTED: uncharacterized protein LOC100846217 [Brachypodium
distachyon]
Length = 138
Score = 67.0 bits (162), Expect = 3e-09
Identities = 38/55 (69%), Positives = 41/55 (74%), Gaps = 3/55 (5%)
Frame = -1
Query: 560 AEARERLVVMCE--AVRPKELFSTEAVRVVAEDLGLNRSKDP-ALGFRPPKMSIA 405
AEAR RL AVRPK+LF EAVR V EDLGLNR+KDP A+GFRPPK SIA
Sbjct: 54 AEARGRLAAAVSEGAVRPKDLFPGEAVRAVVEDLGLNRAKDPAAMGFRPPKASIA 108
>ref|XP_004251904.1| PREDICTED: uncharacterized protein LOC101263491 [Solanum
lycopersicum]
Length = 817
Score = 63.5 bits (153), Expect = 3e-08
Identities = 30/52 (57%), Positives = 38/52 (73%)
Frame = -1
Query: 560 AEARERLVVMCEAVRPKELFSTEAVRVVAEDLGLNRSKDPALGFRPPKMSIA 405
AEARE L +C++ PK++F +A V EDLGLN+ KD LGFRPPK+SIA
Sbjct: 75 AEARESLAQVCQSFAPKDVFPRDAFGAVMEDLGLNKLKDQRLGFRPPKVSIA 126
>emb|CBI26704.3| unnamed protein product [Vitis vinifera]
Length = 298
Score = 63.2 bits (152), Expect = 4e-08
Identities = 39/104 (37%), Positives = 55/104 (52%)
Frame = -1
Query: 557 EARERLVVMCEAVRPKELFSTEAVRVVAEDLGLNRSKDPALGFRPPKMSIAXXXXXXXXX 378
EAR ++V MCE + PK++ E + + EDLG++ ++ LGFRPPKMSIA
Sbjct: 64 EARAKVVAMCEGLAPKDIVPREVIGGMIEDLGIS-GREQKLGFRPPKMSIAEKLLLTKRK 122
Query: 377 XXXXXEINEHSSVHSPLRYPVSAGVKSESRGTMAYGASRFSQDK 246
E HS+ +S R + G +ESRG + A F DK
Sbjct: 123 MEESKEFVAHSATYSSQRLQSTFGSPTESRGPQ-HTARMFPSDK 165
>gb|EAY87316.1| hypothetical protein OsI_08720 [Oryza sativa Indica Group]
Length = 121
Score = 62.8 bits (151), Expect = 6e-08
Identities = 35/51 (68%), Positives = 41/51 (80%), Gaps = 3/51 (5%)
Frame = -1
Query: 560 AEARERL--VVMCEAVRPKELFSTEAVRVVAEDLGLNRSKDP-ALGFRPPK 417
AEARERL VV AVRPK+LF EAVR + EDLGLNR++DP A+GFRPP+
Sbjct: 61 AEARERLAAVVTEGAVRPKDLFPGEAVRALVEDLGLNRARDPAAMGFRPPQ 111
>ref|XP_006344876.1| PREDICTED: uncharacterized protein LOC102590974 isoform X1 [Solanum
tuberosum] gi|565356030|ref|XP_006344877.1| PREDICTED:
uncharacterized protein LOC102590974 isoform X2 [Solanum
tuberosum]
Length = 816
Score = 62.4 bits (150), Expect = 7e-08
Identities = 29/51 (56%), Positives = 37/51 (72%)
Frame = -1
Query: 557 EARERLVVMCEAVRPKELFSTEAVRVVAEDLGLNRSKDPALGFRPPKMSIA 405
EARE L +C++ PK++F +A V EDLGLN+ KD LGFRPPK+SIA
Sbjct: 75 EARENLAQVCQSFAPKDVFPRDAFGAVIEDLGLNKLKDQRLGFRPPKVSIA 125
>ref|XP_006648996.1| PREDICTED: PHD finger protein At3g20280-like, partial [Oryza
brachyantha]
Length = 745
Score = 61.2 bits (147), Expect = 2e-07
Identities = 32/46 (69%), Positives = 37/46 (80%), Gaps = 1/46 (2%)
Frame = -1
Query: 539 VVMCEAVRPKELFSTEAVRVVAEDLGLNRSKDP-ALGFRPPKMSIA 405
VV AVRPK+LF EAVR + EDLGLNR++DP A+GFRPPK SIA
Sbjct: 4 VVAEGAVRPKDLFPGEAVRALVEDLGLNRARDPAAMGFRPPKASIA 49
>gb|ESW14341.1| hypothetical protein PHAVU_008G272900g [Phaseolus vulgaris]
Length = 824
Score = 59.7 bits (143), Expect = 5e-07
Identities = 58/194 (29%), Positives = 86/194 (44%), Gaps = 18/194 (9%)
Frame = -1
Query: 557 EARERLVVMCEAVRPKELFSTEAVRVVAEDLGL-NRSKDPALGFRPPKMSIAXXXXXXXX 381
EAR RL +C+ + PK++ + EA+ V EDLGL ++ KD LGFR PKMSIA
Sbjct: 72 EARARLAGLCQGLAPKDIVAREAIGTVIEDLGLHSKLKDQRLGFRTPKMSIAERYSHAKW 131
Query: 380 XXXXXXEINEHSSVHS--PLRYPVSAGVKSESRGTMAYGASRFSQDKSSMLTXXXXXXXX 207
+ + S+ H+ PL+ +S V + ++ F DKSS
Sbjct: 132 KMEEAKKFSAPSTTHTSQPLQPNISEPVDNR---VPSHVVRIFPSDKSSQQAIPSMGPVV 188
Query: 206 XXXSHVPVLASAAPNLKQSQINDVQAGANTIKYSSGSLDR-----ALPP-EH-------- 69
HV +SA QS N+++ + SG L R LP EH
Sbjct: 189 SIPPHVSAGSSAVLQY-QSTGNEIRPPVVSGVMPSGHLGRNSSSLVLPKVEHPQFKVDGG 247
Query: 68 -NGPAYLIRDQVEN 30
NG +Y+++ Q +
Sbjct: 248 SNGSSYMLQVQANS 261
>ref|XP_004965321.1| PREDICTED: uncharacterized protein LOC101774055 isoform X3 [Setaria
italica]
Length = 764
Score = 58.9 bits (141), Expect = 8e-07
Identities = 55/167 (32%), Positives = 79/167 (47%), Gaps = 5/167 (2%)
Frame = -1
Query: 560 AEARERLVVMC----EAVRPKELFSTEAVRVVAEDLGLNRSKDP-ALGFRPPKMSIAXXX 396
AEAR L + E +RP+ELF+TEAVR + +DLGL R++DP A+GFRP K SIA
Sbjct: 45 AEARGALAAVVAGEVELLRPRELFTTEAVRALVQDLGLTRTRDPAAVGFRPRKASIAERV 104
Query: 395 XXXXXXXXXXXEINEHSSVHSPLRYPVSAGVKSESRGTMAYGASRFSQDKSSMLTXXXXX 216
+ + V SP ++A S +R +GAS+ + L+
Sbjct: 105 LLTKRKMEEV----KEALVPSPTVPKMTA---SSARKGFQHGASKITTGVPRNLSTPMTS 157
Query: 215 XXXXXXSHVPVLASAAPNLKQSQINDVQAGANTIKYSSGSLDRALPP 75
PV++ KQ +N AGA++IK +LPP
Sbjct: 158 ---------PVIS------KQPMLNATVAGASSIKSPDIPSAVSLPP 189
>ref|XP_004965320.1| PREDICTED: uncharacterized protein LOC101774055 isoform X2 [Setaria
italica]
Length = 770
Score = 58.9 bits (141), Expect = 8e-07
Identities = 55/167 (32%), Positives = 79/167 (47%), Gaps = 5/167 (2%)
Frame = -1
Query: 560 AEARERLVVMC----EAVRPKELFSTEAVRVVAEDLGLNRSKDP-ALGFRPPKMSIAXXX 396
AEAR L + E +RP+ELF+TEAVR + +DLGL R++DP A+GFRP K SIA
Sbjct: 45 AEARGALAAVVAGEVELLRPRELFTTEAVRALVQDLGLTRTRDPAAVGFRPRKASIAERV 104
Query: 395 XXXXXXXXXXXEINEHSSVHSPLRYPVSAGVKSESRGTMAYGASRFSQDKSSMLTXXXXX 216
+ + V SP ++A S +R +GAS+ + L+
Sbjct: 105 LLTKRKMEEV----KEALVPSPTVPKMTA---SSARKGFQHGASKITTGVPRNLSTPMTS 157
Query: 215 XXXXXXSHVPVLASAAPNLKQSQINDVQAGANTIKYSSGSLDRALPP 75
PV++ KQ +N AGA++IK +LPP
Sbjct: 158 ---------PVIS------KQPMLNATVAGASSIKSPDIPSAVSLPP 189
>ref|XP_004965319.1| PREDICTED: uncharacterized protein LOC101774055 isoform X1 [Setaria
italica]
Length = 792
Score = 58.9 bits (141), Expect = 8e-07
Identities = 55/167 (32%), Positives = 79/167 (47%), Gaps = 5/167 (2%)
Frame = -1
Query: 560 AEARERLVVMC----EAVRPKELFSTEAVRVVAEDLGLNRSKDP-ALGFRPPKMSIAXXX 396
AEAR L + E +RP+ELF+TEAVR + +DLGL R++DP A+GFRP K SIA
Sbjct: 45 AEARGALAAVVAGEVELLRPRELFTTEAVRALVQDLGLTRTRDPAAVGFRPRKASIAERV 104
Query: 395 XXXXXXXXXXXEINEHSSVHSPLRYPVSAGVKSESRGTMAYGASRFSQDKSSMLTXXXXX 216
+ + V SP ++A S +R +GAS+ + L+
Sbjct: 105 LLTKRKMEEV----KEALVPSPTVPKMTA---SSARKGFQHGASKITTGVPRNLSTPMTS 157
Query: 215 XXXXXXSHVPVLASAAPNLKQSQINDVQAGANTIKYSSGSLDRALPP 75
PV++ KQ +N AGA++IK +LPP
Sbjct: 158 ---------PVIS------KQPMLNATVAGASSIKSPDIPSAVSLPP 189
>ref|XP_003617651.1| PHD finger protein [Medicago truncatula]
gi|355518986|gb|AET00610.1| PHD finger protein [Medicago
truncatula]
Length = 874
Score = 58.9 bits (141), Expect = 8e-07
Identities = 50/184 (27%), Positives = 80/184 (43%), Gaps = 3/184 (1%)
Frame = -1
Query: 557 EARERLVVMCEAVRPKELFSTEAVRVVAEDLGLN-RSKDPALGFRPPKMSIAXXXXXXXX 381
EAR +L V+C+ + PK++ EA+ V +DLGLN + D LGFR PKMSIA
Sbjct: 77 EARTKLAVLCQGIAPKDIVGGEAIGSVIDDLGLNAKVVDQRLGFRVPKMSIAEKYLFAKS 136
Query: 380 XXXXXXEINEHSSVHSPLRYPVSAGVKSESRGTMAYGASRFSQDKSSMLTXXXXXXXXXX 201
+ S+ ++ + + G ++R F+ DKS+ +
Sbjct: 137 KMEESKKCAAPSTTYTSQPFQTNTGGMVDNR-VPTTAVRMFASDKSNHTSMPSTVSMASM 195
Query: 200 XSHVPVLASAAPNLKQSQINDVQAGANTIKYSSGSLDRALPPEHNG--PAYLIRDQVENV 27
H+ S+AP QS N+V+ + +P H G P+ + +VEN
Sbjct: 196 PPHL-AAGSSAPLQYQSTSNEVRPPI---------VSGVMPSSHMGRNPSSVAMPRVENP 245
Query: 26 HQKI 15
K+
Sbjct: 246 QFKV 249