BLASTX nr result
ID: Zingiber25_contig00031839
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00031839
(461 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006432556.1| hypothetical protein CICLE_v10000254mg [Citr... 74 3e-11
ref|XP_004170646.1| PREDICTED: replication protein A 70 kDa DNA-... 70 2e-10
ref|XP_004146122.1| PREDICTED: replication protein A 70 kDa DNA-... 70 2e-10
emb|CBI37456.3| unnamed protein product [Vitis vinifera] 69 5e-10
ref|XP_002264009.1| PREDICTED: replication protein A 70 kDa DNA-... 69 5e-10
emb|CAN82475.1| hypothetical protein VITISV_038295 [Vitis vinifera] 69 5e-10
gb|ESW30149.1| hypothetical protein PHAVU_002G128800g [Phaseolus... 69 8e-10
ref|XP_002304377.2| hypothetical protein POPTR_0003s10170g [Popu... 69 8e-10
gb|EMJ12292.1| hypothetical protein PRUPE_ppa001396mg [Prunus pe... 68 1e-09
ref|XP_004245920.1| PREDICTED: replication protein A 70 kDa DNA-... 66 5e-09
ref|XP_006364465.1| PREDICTED: replication protein A 70 kDa DNA-... 65 7e-09
ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding sub... 65 9e-09
ref|NP_001151792.1| DNA binding protein [Zea mays] gi|195649707|... 64 2e-08
ref|XP_004512401.1| PREDICTED: replication protein A 70 kDa DNA-... 62 6e-08
gb|EEC78388.1| hypothetical protein OsI_18166 [Oryza sativa Indi... 62 6e-08
ref|XP_004301636.1| PREDICTED: replication protein A 70 kDa DNA-... 62 8e-08
ref|XP_004960524.1| PREDICTED: replication protein A 70 kDa DNA-... 61 2e-07
gb|EOY25325.1| Replication factor A 1, rfa1, putative [Theobroma... 61 2e-07
ref|XP_006854186.1| hypothetical protein AMTR_s00048p00204000 [A... 60 3e-07
gb|EMT33605.1| Replication protein A 70 kDa DNA-binding subunit ... 60 3e-07
>ref|XP_006432556.1| hypothetical protein CICLE_v10000254mg [Citrus clementina]
gi|568834454|ref|XP_006471343.1| PREDICTED: replication
protein A 70 kDa DNA-binding subunit C-like [Citrus
sinensis] gi|557534678|gb|ESR45796.1| hypothetical
protein CICLE_v10000254mg [Citrus clementina]
Length = 858
Score = 73.6 bits (179), Expect = 3e-11
Identities = 33/80 (41%), Positives = 46/80 (57%), Gaps = 8/80 (10%)
Frame = +3
Query: 3 NDYGGTIKQSFSRNEAQLQCNNCGGHGHSFQNCPIGTSRPAQSVSGGYSS--------AG 158
N Y G+ + + A+ C++CG GHS NCP S P QS GGY++ A
Sbjct: 749 NQYSGSRLPAAGTSAARQSCSSCGAVGHSSMNCPSIMSGPGQSSGGGYANSFSSGAGIAA 808
Query: 159 SNVCFKCHQPGHWASECPSV 218
S+ C+KCH+ GHWA +CPS+
Sbjct: 809 SSECYKCHKTGHWARDCPSL 828
>ref|XP_004170646.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like,
partial [Cucumis sativus]
Length = 425
Score = 70.5 bits (171), Expect = 2e-10
Identities = 34/80 (42%), Positives = 40/80 (50%), Gaps = 8/80 (10%)
Frame = +3
Query: 3 NDYGGTIKQSFSRNEAQLQCNNCGGHGHSFQNCPIGTSRPAQSVSGGY--------SSAG 158
N Y + + + CN+CGG GHS NCP S PA SV GG S
Sbjct: 331 NQYSSSRPSPSTPLNSNTYCNSCGGSGHSSTNCPSIMSGPALSVGGGMYSNQASGPSGGT 390
Query: 159 SNVCFKCHQPGHWASECPSV 218
S CFKCHQ GHWA +CP +
Sbjct: 391 SGECFKCHQTGHWARDCPGL 410
>ref|XP_004146122.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Cucumis sativus]
Length = 861
Score = 70.5 bits (171), Expect = 2e-10
Identities = 34/80 (42%), Positives = 40/80 (50%), Gaps = 8/80 (10%)
Frame = +3
Query: 3 NDYGGTIKQSFSRNEAQLQCNNCGGHGHSFQNCPIGTSRPAQSVSGGY--------SSAG 158
N Y + + + CN+CGG GHS NCP S PA SV GG S
Sbjct: 767 NQYSSSRPSPSTPLNSNTYCNSCGGSGHSSTNCPSIMSGPALSVGGGMYSNQASGPSGGT 826
Query: 159 SNVCFKCHQPGHWASECPSV 218
S CFKCHQ GHWA +CP +
Sbjct: 827 SGECFKCHQTGHWARDCPGL 846
>emb|CBI37456.3| unnamed protein product [Vitis vinifera]
Length = 754
Score = 69.3 bits (168), Expect = 5e-10
Identities = 33/81 (40%), Positives = 39/81 (48%), Gaps = 9/81 (11%)
Frame = +3
Query: 3 NDYGGTIKQSFSRNEAQLQCNNCGGHGHSFQNCPIGTSRPAQSVSGGYSSAGS------- 161
N YG + + CN+CGG GHS NCP P QS GGY S S
Sbjct: 595 NQYGSSGLSATGSTGMYQSCNSCGGTGHSSSNCPSVMHSPRQSSGGGYVSRASTGPSAGG 654
Query: 162 --NVCFKCHQPGHWASECPSV 218
C+KCHQ GHWA +CP +
Sbjct: 655 TTGECYKCHQFGHWARDCPGL 675
>ref|XP_002264009.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Vitis vinifera]
Length = 882
Score = 69.3 bits (168), Expect = 5e-10
Identities = 33/81 (40%), Positives = 39/81 (48%), Gaps = 9/81 (11%)
Frame = +3
Query: 3 NDYGGTIKQSFSRNEAQLQCNNCGGHGHSFQNCPIGTSRPAQSVSGGYSSAGS------- 161
N YG + + CN+CGG GHS NCP P QS GGY S S
Sbjct: 774 NQYGSSGLSATGSTGMYQSCNSCGGTGHSSSNCPSVMHSPRQSSGGGYVSRASTGPSAGG 833
Query: 162 --NVCFKCHQPGHWASECPSV 218
C+KCHQ GHWA +CP +
Sbjct: 834 TTGECYKCHQFGHWARDCPGL 854
>emb|CAN82475.1| hypothetical protein VITISV_038295 [Vitis vinifera]
Length = 882
Score = 69.3 bits (168), Expect = 5e-10
Identities = 33/81 (40%), Positives = 39/81 (48%), Gaps = 9/81 (11%)
Frame = +3
Query: 3 NDYGGTIKQSFSRNEAQLQCNNCGGHGHSFQNCPIGTSRPAQSVSGGYSSAGS------- 161
N YG + + CN+CGG GHS NCP P QS GGY S S
Sbjct: 774 NQYGSSGLSATGSTGMXQSCNSCGGTGHSSSNCPSVMHSPRQSSGGGYVSRASTGPSAGG 833
Query: 162 --NVCFKCHQPGHWASECPSV 218
C+KCHQ GHWA +CP +
Sbjct: 834 TTGECYKCHQFGHWARDCPGL 854
>gb|ESW30149.1| hypothetical protein PHAVU_002G128800g [Phaseolus vulgaris]
Length = 866
Score = 68.6 bits (166), Expect = 8e-10
Identities = 34/79 (43%), Positives = 39/79 (49%), Gaps = 9/79 (11%)
Frame = +3
Query: 3 NDYGGTIKQSFSRNEAQLQCNNCGGHGHSFQNCPIGTSRPAQSVSGGYSS---------A 155
N YG S A C NCGG GH+ CP + P QS GG+S+
Sbjct: 760 NQYGNF--GSAGAPSAYTSCTNCGGSGHTSMLCPNIRNLPGQSSGGGFSNRASYGGSGGG 817
Query: 156 GSNVCFKCHQPGHWASECP 212
S CFKCHQPGHWA +CP
Sbjct: 818 ASGECFKCHQPGHWARDCP 836
>ref|XP_002304377.2| hypothetical protein POPTR_0003s10170g [Populus trichocarpa]
gi|550342884|gb|EEE79356.2| hypothetical protein
POPTR_0003s10170g [Populus trichocarpa]
Length = 854
Score = 68.6 bits (166), Expect = 8e-10
Identities = 29/65 (44%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Frame = +3
Query: 36 SRNEAQLQCNNCGGHGHSFQNCPIGTSRPAQSVSGGY----SSAGSNVCFKCHQPGHWAS 203
S + A CN+CG HS NCP + P QS+ G Y S G+ C+KCHQ GHWA
Sbjct: 773 SSSGAYRSCNSCGATSHSSANCPSMVNAPGQSMGGSYANRTSQGGTGECYKCHQVGHWAR 832
Query: 204 ECPSV 218
+CP +
Sbjct: 833 DCPGL 837
>gb|EMJ12292.1| hypothetical protein PRUPE_ppa001396mg [Prunus persica]
Length = 838
Score = 67.8 bits (164), Expect = 1e-09
Identities = 31/81 (38%), Positives = 40/81 (49%), Gaps = 9/81 (11%)
Frame = +3
Query: 3 NDYGGTIKQSFSRNEAQLQCNNCGGHGHSFQNCPIGTSRPAQSVSGGYSSA--------- 155
N + S + L CN+CG GHS NCP + P QS GY++
Sbjct: 731 NQFSSARSPSTGSVGSYLSCNSCGDAGHSSMNCPSVMNGPGQSSGAGYNNRVSSRPGVGN 790
Query: 156 GSNVCFKCHQPGHWASECPSV 218
S C+KCHQPGHWA +CP +
Sbjct: 791 TSGDCYKCHQPGHWARDCPGL 811
>ref|XP_004245920.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Solanum lycopersicum]
Length = 899
Score = 65.9 bits (159), Expect = 5e-09
Identities = 28/64 (43%), Positives = 35/64 (54%), Gaps = 9/64 (14%)
Frame = +3
Query: 54 LQCNNCGGHGHSFQNCPIGTSRPAQSVSGGY---------SSAGSNVCFKCHQPGHWASE 206
+ CN+CGG GHS NCP S +Q+ G+ S G C+KCHQ GHWA +
Sbjct: 811 MSCNSCGGTGHSASNCPSMMSGQSQAYGSGFGNRATSGMSSGGGGGECYKCHQYGHWARD 870
Query: 207 CPSV 218
CP V
Sbjct: 871 CPGV 874
>ref|XP_006364465.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit C-like
[Solanum tuberosum]
Length = 905
Score = 65.5 bits (158), Expect = 7e-09
Identities = 28/68 (41%), Positives = 36/68 (52%), Gaps = 13/68 (19%)
Frame = +3
Query: 54 LQCNNCGGHGHSFQNCPIGTSRPAQSVSGGYSS-------------AGSNVCFKCHQPGH 194
+ CN+CGG GHS NCP S +Q+ GG+ + G C+KCHQ GH
Sbjct: 813 MSCNSCGGTGHSASNCPSMMSGQSQAYGGGFGNRATSGMSSGGGGGGGGGECYKCHQYGH 872
Query: 195 WASECPSV 218
WA +CP V
Sbjct: 873 WARDCPGV 880
>ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
truncatula] gi|355513943|gb|AES95566.1| Replication
protein A 70 kDa DNA-binding subunit [Medicago
truncatula]
Length = 1723
Score = 65.1 bits (157), Expect = 9e-09
Identities = 32/81 (39%), Positives = 41/81 (50%), Gaps = 9/81 (11%)
Frame = +3
Query: 3 NDYGGTIKQSFSRNEAQ---LQCNNCGGHGHSFQNCPIGTSRPAQSVSGGY------SSA 155
+ YG SF+ + A + C+NCGG HS C + P Q+ G Y S
Sbjct: 763 SQYGNQHNSSFASSGAPGSYMSCSNCGGSDHSSAQCLHLRNPPEQTAGGAYVNTVSGSGG 822
Query: 156 GSNVCFKCHQPGHWASECPSV 218
S C+KC QPGHWAS CPS+
Sbjct: 823 ASGKCYKCQQPGHWASNCPSM 843
Score = 55.8 bits (133), Expect = 6e-06
Identities = 25/54 (46%), Positives = 32/54 (59%)
Frame = +3
Query: 57 QCNNCGGHGHSFQNCPIGTSRPAQSVSGGYSSAGSNVCFKCHQPGHWASECPSV 218
+C C GH NCP + A VSGG A N C+KC+QPGHWA+ CP++
Sbjct: 826 KCYKCQQPGHWASNCP--SMSAANRVSGGSGGASGN-CYKCNQPGHWANNCPNM 876
>ref|NP_001151792.1| DNA binding protein [Zea mays] gi|195649707|gb|ACG44321.1| DNA
binding protein [Zea mays] gi|223945267|gb|ACN26717.1|
unknown [Zea mays] gi|413942327|gb|AFW74976.1| DNA
binding protein [Zea mays]
Length = 876
Score = 64.3 bits (155), Expect = 2e-08
Identities = 32/71 (45%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Frame = +3
Query: 12 GGTIKQSFSRNEAQLQCNNCGGHGHSFQNCPIGTSRPAQSVSG----GYSSAGSNVCFKC 179
G T S +RN Q C +CG GH+ QNCP GT R + S G S + +CFKC
Sbjct: 773 GVTTPVSAARN-VQQTCVSCGSSGHNVQNCPAGTYRQQAAASAASSYGTSQPRNGLCFKC 831
Query: 180 HQPGHWASECP 212
+QPGH+A+ CP
Sbjct: 832 NQPGHFANSCP 842
>ref|XP_004512401.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Cicer arietinum]
Length = 917
Score = 62.4 bits (150), Expect = 6e-08
Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 7/79 (8%)
Frame = +3
Query: 3 NDYGGTIKQSFSRNEAQLQCNNCGGHGHSFQNCPIGTSRPAQSVSGGY-------SSAGS 161
N Y ++ S + + + C+NCG GHS C ++ QS Y S A S
Sbjct: 770 NQYSSSVASSAAPG-SYVSCSNCGASGHSSAQCLNLRNQSGQSTGAAYGNRVSAGSGAAS 828
Query: 162 NVCFKCHQPGHWASECPSV 218
C+KCHQPGHWA +CP +
Sbjct: 829 GDCYKCHQPGHWARDCPGM 847
>gb|EEC78388.1| hypothetical protein OsI_18166 [Oryza sativa Indica Group]
Length = 988
Score = 62.4 bits (150), Expect = 6e-08
Identities = 28/60 (46%), Positives = 34/60 (56%), Gaps = 9/60 (15%)
Frame = +3
Query: 60 CNNCGGHGHSFQNCPIGTSRPAQSVSGGYSSA---------GSNVCFKCHQPGHWASECP 212
CN CG +GHS QNC +G Q S G SS GS+ C+KC QPGH+A +CP
Sbjct: 853 CNICGANGHSAQNCHVGADMDMQETSAGGSSMGNYNSIAGNGSSECYKCKQPGHYARDCP 912
>ref|XP_004301636.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Fragaria vesca subsp. vesca]
Length = 874
Score = 62.0 bits (149), Expect = 8e-08
Identities = 28/58 (48%), Positives = 35/58 (60%), Gaps = 5/58 (8%)
Frame = +3
Query: 54 LQCNNCGGHGHSFQNCPIGTSRPAQSVSGGYSSA-----GSNVCFKCHQPGHWASECP 212
L CN CGG H+ NCP + QS G Y+++ S C+KCHQPGHWAS+CP
Sbjct: 793 LSCNICGGTSHNSLNCP---NVMKQSSGGSYANSRPVASNSGECYKCHQPGHWASDCP 847
>ref|XP_004960524.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Setaria italica]
Length = 1002
Score = 60.8 bits (146), Expect = 2e-07
Identities = 32/79 (40%), Positives = 41/79 (51%), Gaps = 7/79 (8%)
Frame = +3
Query: 3 NDYGGTIKQSFSRNEAQLQCNNCGGHGHSFQNCPIGTSR---PAQSVSGGYSS----AGS 161
N YGG + S C CG GH+ Q+CP R PA + + Y S AGS
Sbjct: 907 NTYGG-VSTPLSATRNVETCMGCGSSGHNAQSCPASMYRQQQPAANTASSYVSSPGDAGS 965
Query: 162 NVCFKCHQPGHWASECPSV 218
CF+C+QPGH+A+ CP V
Sbjct: 966 GRCFRCNQPGHFANACPGV 984
>gb|EOY25325.1| Replication factor A 1, rfa1, putative [Theobroma cacao]
Length = 911
Score = 60.8 bits (146), Expect = 2e-07
Identities = 29/60 (48%), Positives = 36/60 (60%), Gaps = 9/60 (15%)
Frame = +3
Query: 60 CNNCGGHGHSFQNCPIGTSRPAQSV----SGGYSSAGS-----NVCFKCHQPGHWASECP 212
CN+CG GHS NCP + PAQS+ +G SS S + C+KCHQ GHWA +CP
Sbjct: 825 CNSCGVTGHSSTNCPTFMNGPAQSMGRDCTGRISSEASVGRTSDECYKCHQSGHWAKDCP 884
>ref|XP_006854186.1| hypothetical protein AMTR_s00048p00204000 [Amborella trichopoda]
gi|548857855|gb|ERN15653.1| hypothetical protein
AMTR_s00048p00204000 [Amborella trichopoda]
Length = 798
Score = 60.1 bits (144), Expect = 3e-07
Identities = 27/62 (43%), Positives = 33/62 (53%)
Frame = +3
Query: 33 FSRNEAQLQCNNCGGHGHSFQNCPIGTSRPAQSVSGGYSSAGSNVCFKCHQPGHWASECP 212
F+ A L C CGG GH+ NCP ++ GG S+ CFKC Q GHWA +CP
Sbjct: 716 FNGGNASLNCYKCGGVGHNSVNCPRNRLSNSEQSFGG----SSDQCFKCKQSGHWAKDCP 771
Query: 213 SV 218
V
Sbjct: 772 GV 773
>gb|EMT33605.1| Replication protein A 70 kDa DNA-binding subunit [Aegilops
tauschii]
Length = 877
Score = 60.1 bits (144), Expect = 3e-07
Identities = 26/60 (43%), Positives = 35/60 (58%), Gaps = 9/60 (15%)
Frame = +3
Query: 60 CNNCGGHGHSFQNCPIGTSRPAQSVSGGYSS---------AGSNVCFKCHQPGHWASECP 212
C+ CG GHS QNCP Q + GY++ AGS +CFKC+QPGH++ +CP
Sbjct: 684 CSVCGSTGHSVQNCPAVAMDMQQPAASGYAASSYGSSPGDAGSGLCFKCNQPGHFSRDCP 743