BLASTX nr result
ID: Zingiber25_contig00031701
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00031701
(476 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_009002585.1| polyprotein [Hibiscus bacilliform virus GD1]... 129 5e-28
gb|AFM82591.1| polyprotein [Cacao swollen shoot virus] 127 2e-27
emb|CAG70342.1| CP, RT, RNaseH and protease polyprotein [Cacao s... 124 1e-26
emb|CAE81279.1| polyprotein [Cacao swollen shoot virus] 121 8e-26
ref|NP_041734.1| polyprotein [Cacao swollen shoot virus] gi|3478... 120 1e-25
emb|CAE76628.1| polyprotein [Cacao swollen shoot virus] 120 2e-25
emb|CAD59232.1| polyprotein [Cacao swollen shoot virus] 119 4e-25
ref|YP_008567619.1| ORF3 [Piper yellow mottle virus] gi|54035746... 113 2e-23
ref|YP_003284237.1| unnamed protein product [Sugarcane bacillifo... 112 7e-23
ref|YP_224289.1| ORF III polyprotein [Banana streak Mysore virus... 110 3e-22
ref|YP_233107.1| polyprotein [Banana streak GF virus] gi|4045727... 109 4e-22
ref|YP_002117531.1| ORF3 [Cycad leaf necrosis virus] gi|19439916... 107 1e-21
gb|AFF58897.1| polyprotein, partial [Fig badnavirus 1] 107 2e-21
gb|AER45369.1| polyprotein, partial [Fig badnavirus 1] 104 1e-20
gb|AER45361.1| polyprotein, partial [Fig badnavirus 1] 104 1e-20
gb|ACE76858.1| polyprotein [Citrus yellow mosaic virus] 104 1e-20
gb|AFF58911.1| polyprotein, partial [Fig badnavirus 1] gi|381144... 104 1e-20
gb|AER45341.1| polyprotein, partial [Fig badnavirus 1] 104 1e-20
gb|AER45335.1| polyprotein, partial [Fig badnavirus 1] gi|354990... 104 1e-20
gb|AER45329.1| polyprotein, partial [Fig badnavirus 1] gi|354990... 104 1e-20
>ref|YP_009002585.1| polyprotein [Hibiscus bacilliform virus GD1]
gi|584388573|gb|AHI90954.1| polyprotein [Hibiscus
bacilliform virus GD1]
Length = 1892
Score = 129 bits (323), Expect = 5e-28
Identities = 61/103 (59%), Positives = 79/103 (76%)
Frame = -2
Query: 313 TPLFDDQIREYKRNQRKIHNTRQVARRIGRRLTGRTASVYTLE*QIDPQAQLRLSMQERA 134
TPLF+DQIR+Y+ +QR+ + T++ RR+ RR+TGR TLE ++DPQA L++SMQERA
Sbjct: 26 TPLFEDQIRDYRNSQRRAYTTQRAVRRLRRRITGRQPYQETLEQEVDPQADLQMSMQERA 85
Query: 133 AIVPAEVLYHSRRDDAHHRVYVHRSEKPLMVTADNQQDRIFIQ 5
+VPAEVLY SRRD HHRVY HRSE+ ++ T NQ DR FIQ
Sbjct: 86 RLVPAEVLYRSRRDTIHHRVYSHRSEEAILCTDGNQVDRTFIQ 128
>gb|AFM82591.1| polyprotein [Cacao swollen shoot virus]
Length = 1872
Score = 127 bits (318), Expect = 2e-27
Identities = 70/125 (56%), Positives = 84/125 (67%), Gaps = 8/125 (6%)
Frame = -2
Query: 355 MASTVTEH-PSTTTIT------PLFDDQIREYKRNQRKIHNTRQVARRIGRRLTG-RTAS 200
M+ T T PS TT PLF+DQ+R Y+RNQR++ N R+ ARR + LTG R+
Sbjct: 1 MSQTRTHQMPSVTTTVNEQGEGPLFEDQVRNYRRNQRRLFNLRKKARRAQKALTGSRSRH 60
Query: 199 VYTLE*QIDPQAQLRLSMQERAAIVPAEVLYHSRRDDAHHRVYVHRSEKPLMVTADNQQD 20
TLE +IDPQ LRLSMQERA +VPAEVLY SRRD HHRVY HRSE+ ++ NQ D
Sbjct: 61 QETLEQEIDPQVTLRLSMQERARLVPAEVLYRSRRDTVHHRVYTHRSEESILCVGGNQVD 120
Query: 19 RIFIQ 5
R FIQ
Sbjct: 121 RTFIQ 125
>emb|CAG70342.1| CP, RT, RNaseH and protease polyprotein [Cacao swollen shoot virus]
Length = 1868
Score = 124 bits (311), Expect = 1e-26
Identities = 68/125 (54%), Positives = 86/125 (68%), Gaps = 8/125 (6%)
Frame = -2
Query: 355 MASTVTEH--PSTTTIT------PLFDDQIREYKRNQRKIHNTRQVARRIGRRLTGRTAS 200
M+ T+H PS T+ + PL++DQIR+Y+R QR+I N R+ ARR+ R +TG
Sbjct: 1 MSRARTQHSVPSVTSTSEQQREGPLYEDQIRDYRRGQRRIFNLRRQARRLRRSVTGSRYQ 60
Query: 199 VYTLE*QIDPQAQLRLSMQERAAIVPAEVLYHSRRDDAHHRVYVHRSEKPLMVTADNQQD 20
TLE +IDPQ LRLSMQERA +VPAEVLY SRRD HHRVY HRSE+ ++ +NQ D
Sbjct: 61 E-TLEQEIDPQTTLRLSMQERARLVPAEVLYRSRRDTVHHRVYTHRSEESVLCIGNNQVD 119
Query: 19 RIFIQ 5
R FIQ
Sbjct: 120 RAFIQ 124
>emb|CAE81279.1| polyprotein [Cacao swollen shoot virus]
Length = 1816
Score = 121 bits (304), Expect = 8e-26
Identities = 65/116 (56%), Positives = 80/116 (68%), Gaps = 7/116 (6%)
Frame = -2
Query: 331 PSTTTIT-------PLFDDQIREYKRNQRKIHNTRQVARRIGRRLTGRTASVYTLE*QID 173
PS T+ T PL++DQIR+Y+R+QR+I N R+ ARR+ R + G TLE +ID
Sbjct: 11 PSVTSTTSEQNREGPLYEDQIRDYRRSQRRIFNLRRRARRLRRSMMGSRYQE-TLEQEID 69
Query: 172 PQAQLRLSMQERAAIVPAEVLYHSRRDDAHHRVYVHRSEKPLMVTADNQQDRIFIQ 5
PQ LRLSMQERA +VPAEVLY SRRD HHRVY HRSE+ ++ NQ DR FIQ
Sbjct: 70 PQTTLRLSMQERARLVPAEVLYRSRRDTVHHRVYTHRSEESVLCVGGNQVDRAFIQ 125
>ref|NP_041734.1| polyprotein [Cacao swollen shoot virus] gi|347871|gb|AAA03171.1|
polyprotein [Cacao swollen shoot virus]
Length = 1834
Score = 120 bits (302), Expect = 1e-25
Identities = 65/116 (56%), Positives = 79/116 (68%), Gaps = 7/116 (6%)
Frame = -2
Query: 331 PSTTTIT-------PLFDDQIREYKRNQRKIHNTRQVARRIGRRLTGRTASVYTLE*QID 173
PS TT T PL++DQIR+Y+R QR+I N R+ ARR+ R + G TLE +ID
Sbjct: 11 PSVTTTTSEQNREGPLYEDQIRDYRRGQRRIFNLRRRARRLRRSMMGSRYQE-TLEQEID 69
Query: 172 PQAQLRLSMQERAAIVPAEVLYHSRRDDAHHRVYVHRSEKPLMVTADNQQDRIFIQ 5
PQ LRLSMQERA +VPAEVLY SRRD HHRVY HRSE+ ++ +Q DR FIQ
Sbjct: 70 PQTTLRLSMQERARLVPAEVLYRSRRDTVHHRVYTHRSEESVLCVGGSQVDRAFIQ 125
>emb|CAE76628.1| polyprotein [Cacao swollen shoot virus]
Length = 1847
Score = 120 bits (301), Expect = 2e-25
Identities = 61/102 (59%), Positives = 75/102 (73%)
Frame = -2
Query: 310 PLFDDQIREYKRNQRKIHNTRQVARRIGRRLTGRTASVYTLE*QIDPQAQLRLSMQERAA 131
PL++DQIR+Y+R+QR+I N R+ ARR+ R + G TLE +IDPQ LRLSMQERA
Sbjct: 25 PLYEDQIRDYRRSQRRIFNLRRNARRLRRSMMGSRYQE-TLEQEIDPQTTLRLSMQERAR 83
Query: 130 IVPAEVLYHSRRDDAHHRVYVHRSEKPLMVTADNQQDRIFIQ 5
+VPAEVLY SRRD HHRVY HRSE+ ++ NQ DR FIQ
Sbjct: 84 LVPAEVLYRSRRDTVHHRVYTHRSEESVLCVGGNQVDRAFIQ 125
>emb|CAD59232.1| polyprotein [Cacao swollen shoot virus]
Length = 1839
Score = 119 bits (298), Expect = 4e-25
Identities = 64/116 (55%), Positives = 79/116 (68%), Gaps = 7/116 (6%)
Frame = -2
Query: 331 PSTTTIT-------PLFDDQIREYKRNQRKIHNTRQVARRIGRRLTGRTASVYTLE*QID 173
PS TT T PL++DQIR+Y+R QR+I N ++ ARR+ R + G TLE +ID
Sbjct: 11 PSVTTTTSERNREGPLYEDQIRDYRRGQRRIFNLQRRARRLRRSMMGSRYQE-TLEQEID 69
Query: 172 PQAQLRLSMQERAAIVPAEVLYHSRRDDAHHRVYVHRSEKPLMVTADNQQDRIFIQ 5
PQ LRLSMQERA +VPAEVLY SRRD HHRVY HRSE+ ++ +Q DR FIQ
Sbjct: 70 PQTTLRLSMQERARLVPAEVLYRSRRDTVHHRVYTHRSEESVLCVGGSQVDRAFIQ 125
>ref|YP_008567619.1| ORF3 [Piper yellow mottle virus] gi|540357465|gb|AGV08293.1| ORF3
[Piper yellow mottle virus]
Length = 1925
Score = 113 bits (283), Expect = 2e-23
Identities = 56/102 (54%), Positives = 73/102 (71%)
Frame = -2
Query: 307 LFDDQIREYKRNQRKIHNTRQVARRIGRRLTGRTASVYTLE*QIDPQAQLRLSMQERAAI 128
L +DQI +Y++NQR++HN RQ RR+ T+ +E +DPQ QL SM +RA+I
Sbjct: 9 LVEDQITQYRQNQRRMHNLRQAVRRLTNSQAS-TSGQEIIEQSLDPQKQLMRSMTQRASI 67
Query: 127 VPAEVLYHSRRDDAHHRVYVHRSEKPLMVTADNQQDRIFIQE 2
VPAEVLYHSR+DD +H+VY+HRSE+ L VT NQ DR FIQE
Sbjct: 68 VPAEVLYHSRKDDVNHKVYIHRSEEALSVTEGNQVDRTFIQE 109
>ref|YP_003284237.1| unnamed protein product [Sugarcane bacilliform virus]
gi|240114281|gb|ACS44708.1| ORF3 protein [Sugarcane
bacilliform virus]
Length = 1792
Score = 112 bits (279), Expect = 7e-23
Identities = 60/116 (51%), Positives = 80/116 (68%), Gaps = 7/116 (6%)
Frame = -2
Query: 328 STTTIT----PLFDDQIREYKRNQRKIHNTRQVARRIG---RRLTGRTASVYTLE*QIDP 170
S+ T+T PL +DQIR+Y+R QR H +VAR IG R + GR +TL ++P
Sbjct: 11 SSQTVTEPGQPLVEDQIRDYRRAQRARHEAARVARNIGNIGRTIVGRQPREHTLALLMNP 70
Query: 169 QAQLRLSMQERAAIVPAEVLYHSRRDDAHHRVYVHRSEKPLMVTADNQQDRIFIQE 2
+ +L+ SMQERA VPAEVLY +RRDD HHRVY HRSE+ ++V ++QQDR FIQ+
Sbjct: 71 EVELQRSMQERARTVPAEVLYMTRRDDIHHRVYHHRSEERMLVLRNDQQDRTFIQQ 126
>ref|YP_224289.1| ORF III polyprotein [Banana streak Mysore virus]
gi|58618162|gb|AAW80648.1| ORF III polyprotein [Banana
streak Mysore virus]
Length = 1869
Score = 110 bits (274), Expect = 3e-22
Identities = 63/120 (52%), Positives = 81/120 (67%), Gaps = 5/120 (4%)
Frame = -2
Query: 346 TVTEHPSTTTI--TPLFDDQIREYKRNQRKIHNTRQVARRIG---RRLTGRTASVYTLE* 182
T T PST+ TPL +DQIR+Y+ + R+ + ++VAR IG RRL GR TL
Sbjct: 12 TETMGPSTSGRDGTPLIEDQIRDYRASARRRYEAQRVARNIGNVGRRLIGRQTREDTLAL 71
Query: 181 QIDPQAQLRLSMQERAAIVPAEVLYHSRRDDAHHRVYVHRSEKPLMVTADNQQDRIFIQE 2
+DP+ +L+ SM+ERA VPAEVLY SRRDD HHRVY RSE+ +MV+ +QQDR FI E
Sbjct: 72 LMDPEVELQRSMRERARTVPAEVLYMSRRDDVHHRVYHFRSEERMMVSDADQQDRTFISE 131
>ref|YP_233107.1| polyprotein [Banana streak GF virus] gi|40457271|gb|AAR86692.1|
polyprotein III [Banana streak GF virus]
Length = 1832
Score = 109 bits (272), Expect = 4e-22
Identities = 55/107 (51%), Positives = 75/107 (70%), Gaps = 3/107 (2%)
Frame = -2
Query: 313 TPLFDDQIREYKRNQRKIHNTRQVARR---IGRRLTGRTASVYTLE*QIDPQAQLRLSMQ 143
TPL +DQIR+Y+R+ R + +++ R IGR + GR +TL +DP+ +LR SMQ
Sbjct: 25 TPLVEDQIRDYRRSARARYEAQRMGRNLVNIGRTIIGRRPREHTLALLMDPEVELRRSMQ 84
Query: 142 ERAAIVPAEVLYHSRRDDAHHRVYVHRSEKPLMVTADNQQDRIFIQE 2
ERA VPAEVLY +RRDD HHRVY +RSE+ +++T +QQDR FI E
Sbjct: 85 ERARTVPAEVLYMTRRDDIHHRVYHYRSEEGMLITGSDQQDRTFITE 131
>ref|YP_002117531.1| ORF3 [Cycad leaf necrosis virus] gi|194399161|gb|ACF60613.1| ORF3
[Cycad leaf necrosis virus]
Length = 1916
Score = 107 bits (268), Expect = 1e-21
Identities = 54/106 (50%), Positives = 73/106 (68%), Gaps = 3/106 (2%)
Frame = -2
Query: 310 PLFDDQIREYKRNQRKIHNTRQVARR---IGRRLTGRTASVYTLE*QIDPQAQLRLSMQE 140
PL +DQ+R+Y+R QR+ + ++VAR IGR + G +TL +DP+A+L SMQE
Sbjct: 18 PLVEDQVRDYRRGQRRRYEAQRVARNLQNIGRTIVGARPREHTLALLMDPEAELTRSMQE 77
Query: 139 RAAIVPAEVLYHSRRDDAHHRVYVHRSEKPLMVTADNQQDRIFIQE 2
RA VPAEVLY +RRDD HHRVY HRSE+ L++ + Q DR FI +
Sbjct: 78 RARTVPAEVLYMTRRDDIHHRVYYHRSEERLLIIGNTQVDRTFIPQ 123
>gb|AFF58897.1| polyprotein, partial [Fig badnavirus 1]
Length = 197
Score = 107 bits (267), Expect = 2e-21
Identities = 56/102 (54%), Positives = 74/102 (72%)
Frame = -2
Query: 310 PLFDDQIREYKRNQRKIHNTRQVARRIGRRLTGRTASVYTLE*QIDPQAQLRLSMQERAA 131
PLF+DQIR+Y+RNQR+ Q RR R+ GR + TLE +DP+ +L SMQERA
Sbjct: 27 PLFEDQIRDYRRNQRRRFVAEQAVRRTMGRMRGRRYN-QTLEQIVDPEVELNQSMQERAN 85
Query: 130 IVPAEVLYHSRRDDAHHRVYVHRSEKPLMVTADNQQDRIFIQ 5
+VPAEVLY SRRD+ +H+VY HRS+KP++ + QQDR+FIQ
Sbjct: 86 LVPAEVLYRSRRDNINHQVYNHRSKKPMLCVGE-QQDRMFIQ 126
>gb|AER45369.1| polyprotein, partial [Fig badnavirus 1]
Length = 198
Score = 104 bits (260), Expect = 1e-20
Identities = 55/102 (53%), Positives = 73/102 (71%)
Frame = -2
Query: 310 PLFDDQIREYKRNQRKIHNTRQVARRIGRRLTGRTASVYTLE*QIDPQAQLRLSMQERAA 131
PLF+DQIR+Y+RNQR+ Q RR R+ GR + TLE +DP+ +L SMQERA
Sbjct: 27 PLFEDQIRDYRRNQRRRFVAEQAVRRTTGRMRGRRYN-QTLEQIVDPEVELNQSMQERAN 85
Query: 130 IVPAEVLYHSRRDDAHHRVYVHRSEKPLMVTADNQQDRIFIQ 5
+VPAEVLY SRRD+ +H+VY HRSE+ ++ + QQDR+FIQ
Sbjct: 86 LVPAEVLYRSRRDNINHQVYNHRSEEAMLCVGE-QQDRMFIQ 126
>gb|AER45361.1| polyprotein, partial [Fig badnavirus 1]
Length = 198
Score = 104 bits (260), Expect = 1e-20
Identities = 55/102 (53%), Positives = 73/102 (71%)
Frame = -2
Query: 310 PLFDDQIREYKRNQRKIHNTRQVARRIGRRLTGRTASVYTLE*QIDPQAQLRLSMQERAA 131
PLF+DQIR+Y+RNQR+ Q RR R+ GR + TLE +DP+ +L SMQERA
Sbjct: 27 PLFEDQIRDYRRNQRRRFVAEQAVRRTTGRMRGRRYN-QTLEQIVDPEVELNQSMQERAN 85
Query: 130 IVPAEVLYHSRRDDAHHRVYVHRSEKPLMVTADNQQDRIFIQ 5
+VPAEVLY SRRD+ +H+VY HRSE+ ++ + QQDR+FIQ
Sbjct: 86 LVPAEVLYRSRRDNINHQVYNHRSEEAMLCVGE-QQDRMFIQ 126
>gb|ACE76858.1| polyprotein [Citrus yellow mosaic virus]
Length = 1967
Score = 104 bits (260), Expect = 1e-20
Identities = 63/127 (49%), Positives = 83/127 (65%), Gaps = 11/127 (8%)
Frame = -2
Query: 352 ASTVTEH--PSTTTI------TPLFDDQIREYKRNQRKIHNTRQVARRIGRR---LTGRT 206
A TV E P+TT+ TPL+DDQIR+Y++ QR+ HN +GRR L GR
Sbjct: 6 ARTVVEQLPPATTSRVEERNNTPLYDDQIRDYRQWQRRRHN-------MGRRWNQLMGRP 58
Query: 205 ASVYTLE*QIDPQAQLRLSMQERAAIVPAEVLYHSRRDDAHHRVYVHRSEKPLMVTADNQ 26
+ TLE +DP+ L+LSMQERA +VPAEVLY SR DD HH+VY+HRSE+ ++ +Q
Sbjct: 59 YN-QTLEQVVDPEVALQLSMQERARLVPAEVLYRSRNDDRHHQVYIHRSEEAILCVDGDQ 117
Query: 25 QDRIFIQ 5
DR+ IQ
Sbjct: 118 VDRLLIQ 124
>gb|AFF58911.1| polyprotein, partial [Fig badnavirus 1] gi|381144412|gb|AFF58913.1|
polyprotein, partial [Fig badnavirus 1]
gi|381144415|gb|AFF58915.1| polyprotein, partial [Fig
badnavirus 1] gi|381144418|gb|AFF58917.1| polyprotein,
partial [Fig badnavirus 1]
Length = 197
Score = 104 bits (259), Expect = 1e-20
Identities = 55/102 (53%), Positives = 73/102 (71%)
Frame = -2
Query: 310 PLFDDQIREYKRNQRKIHNTRQVARRIGRRLTGRTASVYTLE*QIDPQAQLRLSMQERAA 131
PLF+DQIR+Y+RNQR+ Q RR R+ GR + TLE +DP+ +L SMQERA
Sbjct: 27 PLFEDQIRDYRRNQRRRFVAEQAVRRTMGRMRGRRYN-QTLEQIVDPEVELNQSMQERAN 85
Query: 130 IVPAEVLYHSRRDDAHHRVYVHRSEKPLMVTADNQQDRIFIQ 5
+VPAEVLY SRRD+ +H+VY HRSE+ ++ + QQDR+FIQ
Sbjct: 86 LVPAEVLYRSRRDNINHQVYNHRSEEAMLCVGE-QQDRMFIQ 126
>gb|AER45341.1| polyprotein, partial [Fig badnavirus 1]
Length = 198
Score = 104 bits (259), Expect = 1e-20
Identities = 55/102 (53%), Positives = 73/102 (71%)
Frame = -2
Query: 310 PLFDDQIREYKRNQRKIHNTRQVARRIGRRLTGRTASVYTLE*QIDPQAQLRLSMQERAA 131
PLF+DQIR+Y+RNQR+ Q RR R+ GR + TLE +DP+ +L SMQERA
Sbjct: 27 PLFEDQIRDYRRNQRRRFVAEQAVRRTMGRMRGRRYN-QTLEQIVDPEVELNQSMQERAN 85
Query: 130 IVPAEVLYHSRRDDAHHRVYVHRSEKPLMVTADNQQDRIFIQ 5
+VPAEVLY SRRD+ +H+VY HRSE+ ++ + QQDR+FIQ
Sbjct: 86 LVPAEVLYRSRRDNINHQVYNHRSEEAMLCVGE-QQDRMFIQ 126
>gb|AER45335.1| polyprotein, partial [Fig badnavirus 1] gi|354990615|gb|AER45357.1|
polyprotein, partial [Fig badnavirus 1]
gi|354990618|gb|AER45359.1| polyprotein, partial [Fig
badnavirus 1] gi|354990630|gb|AER45367.1| polyprotein,
partial [Fig badnavirus 1] gi|354990636|gb|AER45371.1|
polyprotein, partial [Fig badnavirus 1]
Length = 198
Score = 104 bits (259), Expect = 1e-20
Identities = 55/102 (53%), Positives = 73/102 (71%)
Frame = -2
Query: 310 PLFDDQIREYKRNQRKIHNTRQVARRIGRRLTGRTASVYTLE*QIDPQAQLRLSMQERAA 131
PLF+DQIR+Y+RNQR+ Q RR R+ GR + TLE +DP+ +L SMQERA
Sbjct: 27 PLFEDQIRDYRRNQRRRFVAEQAVRRTMGRMRGRRYN-QTLEQIVDPEVELNQSMQERAN 85
Query: 130 IVPAEVLYHSRRDDAHHRVYVHRSEKPLMVTADNQQDRIFIQ 5
+VPAEVLY SRRD+ +H+VY HRSE+ ++ + QQDR+FIQ
Sbjct: 86 LVPAEVLYRSRRDNINHQVYNHRSEEAMLCVGE-QQDRMFIQ 126
>gb|AER45329.1| polyprotein, partial [Fig badnavirus 1] gi|354990579|gb|AER45333.1|
polyprotein, partial [Fig badnavirus 1]
gi|354990594|gb|AER45343.1| polyprotein, partial [Fig
badnavirus 1] gi|354990597|gb|AER45345.1| polyprotein,
partial [Fig badnavirus 1] gi|354990600|gb|AER45347.1|
polyprotein, partial [Fig badnavirus 1]
gi|354990606|gb|AER45351.1| polyprotein, partial [Fig
badnavirus 1] gi|354990612|gb|AER45355.1| polyprotein,
partial [Fig badnavirus 1] gi|354990624|gb|AER45363.1|
polyprotein, partial [Fig badnavirus 1]
gi|354990627|gb|AER45365.1| polyprotein, partial [Fig
badnavirus 1]
Length = 198
Score = 104 bits (259), Expect = 1e-20
Identities = 55/102 (53%), Positives = 73/102 (71%)
Frame = -2
Query: 310 PLFDDQIREYKRNQRKIHNTRQVARRIGRRLTGRTASVYTLE*QIDPQAQLRLSMQERAA 131
PLF+DQIR+Y+RNQR+ Q RR R+ GR + TLE +DP+ +L SMQERA
Sbjct: 27 PLFEDQIRDYRRNQRRRFVAEQAVRRTMGRMRGRRYN-QTLEQIVDPEVELNQSMQERAN 85
Query: 130 IVPAEVLYHSRRDDAHHRVYVHRSEKPLMVTADNQQDRIFIQ 5
+VPAEVLY SRRD+ +H+VY HRSE+ ++ + QQDR+FIQ
Sbjct: 86 LVPAEVLYRSRRDNINHQVYNHRSEEAMLCVGE-QQDRMFIQ 126