BLASTX nr result

ID: Zingiber25_contig00031642 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00031642
         (377 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006656829.1| PREDICTED: U-box domain-containing protein 4...    60   2e-07
dbj|BAB10895.1| unnamed protein product [Arabidopsis thaliana]         60   3e-07
ref|NP_198830.1| armadillo/beta-catenin repeat and RING/U-box do...    60   3e-07
ref|XP_004965101.1| PREDICTED: U-box domain-containing protein 3...    58   1e-06
ref|XP_006394068.1| hypothetical protein EUTSA_v10003938mg [Eutr...    57   2e-06
gb|AFW85194.1| putative ARM repeat-containing protein containing...    57   2e-06
gb|AFW85193.1| putative ARM repeat-containing protein containing...    57   2e-06
dbj|BAD37863.1| arm repeat-containing protein-like [Oryza sativa...    57   3e-06

>ref|XP_006656829.1| PREDICTED: U-box domain-containing protein 41-like [Oryza
           brachyantha]
          Length = 285

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 34/82 (41%), Positives = 41/82 (50%)
 Frame = +2

Query: 131 QFLCPVSRSLMGDPVVFAATGWTFERSCVLACLELGIAXXXXXXXXXXXXXXXXXXXXXX 310
           +F+CP+S  LMGDPV+   TG TFER CV AC+ LG                        
Sbjct: 8   EFVCPISGELMGDPVI-VPTGETFERGCVEACIALGFT----PAALSACMDLAASPPPVL 62

Query: 311 XXNATLKSAIHNWCDARGLPRP 376
             NA LK AI ++CD  GLP P
Sbjct: 63  IPNANLKRAISSYCDRAGLPHP 84


>dbj|BAB10895.1| unnamed protein product [Arabidopsis thaliana]
          Length = 540

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 31/82 (37%), Positives = 43/82 (52%)
 Frame = +2

Query: 131 QFLCPVSRSLMGDPVVFAATGWTFERSCVLACLELGIAXXXXXXXXXXXXXXXXXXXXXX 310
           +FLCP+S SLM DP++  ++G ++ER+CV+AC  LG                        
Sbjct: 51  EFLCPISGSLMADPII-VSSGHSYERACVIACKTLGFTPTPPPDFSTVIP---------- 99

Query: 311 XXNATLKSAIHNWCDARGLPRP 376
             N  LKSAIH+WC+ R  P P
Sbjct: 100 --NLALKSAIHSWCERRCFPPP 119


>ref|NP_198830.1| armadillo/beta-catenin repeat and RING/U-box domain-containing
           protein [Arabidopsis thaliana]
           gi|334302849|sp|Q9FL17.2|PUB40_ARATH RecName: Full=U-box
           domain-containing protein 40; AltName: Full=Plant U-box
           protein 40 gi|332007129|gb|AED94512.1|
           armadillo/beta-catenin repeat and RING/U-box
           domain-containing protein [Arabidopsis thaliana]
          Length = 550

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 31/82 (37%), Positives = 43/82 (52%)
 Frame = +2

Query: 131 QFLCPVSRSLMGDPVVFAATGWTFERSCVLACLELGIAXXXXXXXXXXXXXXXXXXXXXX 310
           +FLCP+S SLM DP++  ++G ++ER+CV+AC  LG                        
Sbjct: 61  EFLCPISGSLMADPII-VSSGHSYERACVIACKTLGFTPTPPPDFSTVIP---------- 109

Query: 311 XXNATLKSAIHNWCDARGLPRP 376
             N  LKSAIH+WC+ R  P P
Sbjct: 110 --NLALKSAIHSWCERRCFPPP 129


>ref|XP_004965101.1| PREDICTED: U-box domain-containing protein 39-like [Setaria
           italica]
          Length = 524

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 33/82 (40%), Positives = 39/82 (47%)
 Frame = +2

Query: 131 QFLCPVSRSLMGDPVVFAATGWTFERSCVLACLELGIAXXXXXXXXXXXXXXXXXXXXXX 310
           +FLCP+S SLM DPVV    G TFER+C+  C  L  A                      
Sbjct: 40  EFLCPISGSLMADPVV-VPPGQTFERACIQVCAAL--AFSPPAVAADLAASVSSSSPLVL 96

Query: 311 XXNATLKSAIHNWCDARGLPRP 376
             N  L++AI NWCD  GLP P
Sbjct: 97  VPNVALRTAILNWCDRLGLPHP 118


>ref|XP_006394068.1| hypothetical protein EUTSA_v10003938mg [Eutrema salsugineum]
           gi|557090707|gb|ESQ31354.1| hypothetical protein
           EUTSA_v10003938mg [Eutrema salsugineum]
          Length = 555

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 31/82 (37%), Positives = 40/82 (48%)
 Frame = +2

Query: 131 QFLCPVSRSLMGDPVVFAATGWTFERSCVLACLELGIAXXXXXXXXXXXXXXXXXXXXXX 310
           +FLCP+S+S+M DPVV  ++G TFER CV  C +LG                        
Sbjct: 38  EFLCPISKSIMSDPVV-VSSGQTFERVCVQVCRDLGFV-----PKLDDDVDDSRPDFSTI 91

Query: 311 XXNATLKSAIHNWCDARGLPRP 376
             N  +KS I  WCD+ G  RP
Sbjct: 92  IPNRNMKSTIDGWCDSVGAERP 113


>gb|AFW85194.1| putative ARM repeat-containing protein containing family protein
           [Zea mays]
          Length = 261

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 32/82 (39%), Positives = 40/82 (48%)
 Frame = +2

Query: 131 QFLCPVSRSLMGDPVVFAATGWTFERSCVLACLELGIAXXXXXXXXXXXXXXXXXXXXXX 310
           +FLCP+S +LM DPVV A  G TFER+C+ AC  L  +                      
Sbjct: 38  EFLCPISGTLMADPVV-APPGQTFERACIQACAALAFSPPTVAVDLSESHSCSSAPLVLI 96

Query: 311 XXNATLKSAIHNWCDARGLPRP 376
             N  L++AI NWCD   LP P
Sbjct: 97  P-NVALRNAILNWCDRLALPHP 117


>gb|AFW85193.1| putative ARM repeat-containing protein containing family protein
           [Zea mays]
          Length = 508

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 32/82 (39%), Positives = 40/82 (48%)
 Frame = +2

Query: 131 QFLCPVSRSLMGDPVVFAATGWTFERSCVLACLELGIAXXXXXXXXXXXXXXXXXXXXXX 310
           +FLCP+S +LM DPVV A  G TFER+C+ AC  L  +                      
Sbjct: 38  EFLCPISGTLMADPVV-APPGQTFERACIQACAALAFSPPTVAVDLSESHSCSSAPLVLI 96

Query: 311 XXNATLKSAIHNWCDARGLPRP 376
             N  L++AI NWCD   LP P
Sbjct: 97  P-NVALRNAILNWCDRLALPHP 117


>dbj|BAD37863.1| arm repeat-containing protein-like [Oryza sativa Japonica Group]
           gi|51535815|dbj|BAD37900.1| arm repeat-containing
           protein-like [Oryza sativa Japonica Group]
           gi|125542978|gb|EAY89117.1| hypothetical protein
           OsI_10608 [Oryza sativa Indica Group]
          Length = 491

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 32/82 (39%), Positives = 41/82 (50%)
 Frame = +2

Query: 131 QFLCPVSRSLMGDPVVFAATGWTFERSCVLACLELGIAXXXXXXXXXXXXXXXXXXXXXX 310
           +F+CP+S  LM DPV+   +G TFER CV AC+ LG                        
Sbjct: 14  EFVCPISGELMADPVI-VPSGETFERGCVEACVALGFTPAALPLSVDLAASPPPALIP-- 70

Query: 311 XXNATLKSAIHNWCDARGLPRP 376
             NA L+ AI ++CD  GLPRP
Sbjct: 71  --NANLRKAISSYCDRVGLPRP 90


Top