BLASTX nr result
ID: Zingiber25_contig00031572
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00031572
(360 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002269066.2| PREDICTED: pentatricopeptide repeat-containi... 105 8e-21
emb|CBI17752.3| unnamed protein product [Vitis vinifera] 105 8e-21
ref|XP_002304774.1| pentatricopeptide repeat-containing family p... 103 2e-20
gb|EPS72968.1| hypothetical protein M569_01787, partial [Genlise... 103 3e-20
ref|XP_006605814.1| PREDICTED: pentatricopeptide repeat-containi... 99 8e-19
gb|ESW21012.1| hypothetical protein PHAVU_005G033500g [Phaseolus... 99 8e-19
gb|EOY17580.1| Pentatricopeptide repeat (PPR-like) superfamily p... 99 8e-19
ref|XP_006851711.1| hypothetical protein AMTR_s00040p00209940 [A... 97 2e-18
ref|XP_006413862.1| hypothetical protein EUTSA_v10024515mg [Eutr... 96 4e-18
ref|XP_004229293.1| PREDICTED: pentatricopeptide repeat-containi... 96 5e-18
ref|XP_002513116.1| pentatricopeptide repeat-containing protein,... 95 8e-18
ref|XP_006345374.1| PREDICTED: pentatricopeptide repeat-containi... 94 1e-17
ref|XP_006283187.1| hypothetical protein CARUB_v10004218mg, part... 94 1e-17
ref|XP_004511291.1| PREDICTED: pentatricopeptide repeat-containi... 94 2e-17
ref|XP_004494981.1| PREDICTED: pentatricopeptide repeat-containi... 94 2e-17
ref|XP_003598903.1| Pentatricopeptide repeat-containing protein ... 94 2e-17
gb|EAZ02971.1| hypothetical protein OsI_25111 [Oryza sativa Indi... 94 2e-17
ref|XP_002459421.1| hypothetical protein SORBIDRAFT_02g004410 [S... 92 9e-17
ref|NP_193806.1| pentatricopeptide repeat-containing protein [Ar... 92 9e-17
ref|XP_004511294.1| PREDICTED: pentatricopeptide repeat-containi... 91 2e-16
>ref|XP_002269066.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g20740-like [Vitis vinifera]
Length = 1294
Score = 105 bits (261), Expect = 8e-21
Identities = 59/115 (51%), Positives = 68/115 (59%), Gaps = 7/115 (6%)
Frame = +3
Query: 9 YFFYGHRKPSQNRPVVRGGRFSNRKVVASAPIDTAVLPTTDF--REWDFDCXXXXXXXXX 182
YFFYGHRKPSQNRP V GG FSNR + P T PTT F + WD D
Sbjct: 553 YFFYGHRKPSQNRPTVHGGLFSNRTTLNPKP-PTLQNPTTHFNLQNWDPDSPKALAIPPS 611
Query: 183 XXXA-----IDRRLSPLARYVLDSFRRHRRWCPEVLSDLRKLRRFPPDLVAEVLR 332
I + LSP+ARY+ DSFR+HR W P V++DL KLRR P LVAEVL+
Sbjct: 612 KTPCERFFDIAKNLSPIARYICDSFRKHRNWGPPVVADLNKLRRVTPVLVAEVLK 666
>emb|CBI17752.3| unnamed protein product [Vitis vinifera]
Length = 729
Score = 105 bits (261), Expect = 8e-21
Identities = 59/115 (51%), Positives = 68/115 (59%), Gaps = 7/115 (6%)
Frame = +3
Query: 9 YFFYGHRKPSQNRPVVRGGRFSNRKVVASAPIDTAVLPTTDF--REWDFDCXXXXXXXXX 182
YFFYGHRKPSQNRP V GG FSNR + P T PTT F + WD D
Sbjct: 14 YFFYGHRKPSQNRPTVHGGLFSNRTTLNPKP-PTLQNPTTHFNLQNWDPDSPKALAIPPS 72
Query: 183 XXXA-----IDRRLSPLARYVLDSFRRHRRWCPEVLSDLRKLRRFPPDLVAEVLR 332
I + LSP+ARY+ DSFR+HR W P V++DL KLRR P LVAEVL+
Sbjct: 73 KTPCERFFDIAKNLSPIARYICDSFRKHRNWGPPVVADLNKLRRVTPVLVAEVLK 127
>ref|XP_002304774.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222842206|gb|EEE79753.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 728
Score = 103 bits (258), Expect = 2e-20
Identities = 57/121 (47%), Positives = 75/121 (61%), Gaps = 11/121 (9%)
Frame = +3
Query: 3 RKYFFYGHRKPSQNRPVVRGGRFSNRKVVASAPIDTAVLP--TTDFREWD--------FD 152
+ YFFYGHRKPSQNRPVVRGG F+NR+ V P + P D +WD
Sbjct: 15 KPYFFYGHRKPSQNRPVVRGGLFTNRQTVKPQPPKNPITPFKPFDLHKWDPQQNLPHQPQ 74
Query: 153 CXXXXXXXXXXXXAIDRRLSPLARYVLDSFRRHR-RWCPEVLSDLRKLRRFPPDLVAEVL 329
A+ +RLSP+AR++LD+FR++R +W PEV+++L KLRR PDLVAEVL
Sbjct: 75 PSKPQSPRSRHSLALSQRLSPIARFILDAFRKNRNQWGPEVVTELCKLRRVTPDLVAEVL 134
Query: 330 R 332
+
Sbjct: 135 K 135
>gb|EPS72968.1| hypothetical protein M569_01787, partial [Genlisea aurea]
Length = 155
Score = 103 bits (256), Expect = 3e-20
Identities = 56/129 (43%), Positives = 73/129 (56%), Gaps = 12/129 (9%)
Frame = +3
Query: 9 YFFYGHRKPSQNRPVVRGGRFSNRKV----VASAPIDTAVLPTTDFREWDFDCXXXXXXX 176
YFFYGHRKP+QNRP VRGG SNR+ S P ++ P D R+WD D
Sbjct: 17 YFFYGHRKPTQNRPTVRGGFISNRRASIPETRSRPSFDSIQPRFDLRKWDPDDDEKKLDR 76
Query: 177 XXXXXA--------IDRRLSPLARYVLDSFRRHRRWCPEVLSDLRKLRRFPPDLVAEVLR 332
+ + LSP+ARY++D+F++H+ W P ++ +L KLRR P LVAEVLR
Sbjct: 77 KPPLGRDPSENFFQVAKNLSPIARYIVDAFKKHKHWNPRLVEELNKLRRVTPKLVAEVLR 136
Query: 333 SRPLIDPSL 359
P DP L
Sbjct: 137 F-PYTDPRL 144
>ref|XP_006605814.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20740-like isoform X2 [Glycine max]
gi|571565751|ref|XP_003555182.2| PREDICTED:
pentatricopeptide repeat-containing protein
At4g20740-like isoform X1 [Glycine max]
Length = 764
Score = 98.6 bits (244), Expect = 8e-19
Identities = 54/114 (47%), Positives = 71/114 (62%), Gaps = 6/114 (5%)
Frame = +3
Query: 9 YFFYGHRKPSQNRPVVRGGRFSNRKVVASAPIDTAVLPTT---DFREWD--FDCXXXXXX 173
YFFYGHR PSQNRP VRGG FSNR+ + P + PTT + + WD F
Sbjct: 59 YFFYGHRNPSQNRPTVRGGLFSNRQTLNPNP--SQPKPTTKPFNIKNWDPHFLSNPNSNP 116
Query: 174 XXXXXXAIDRRLSPLARYVLDSFRRH-RRWCPEVLSDLRKLRRFPPDLVAEVLR 332
+ RLSP+AR+++D+FRR+ +WCP V ++L KLRR P+LVAEVL+
Sbjct: 117 SPSTLSSASLRLSPIARFIVDAFRRNDNKWCPNVAAELSKLRRITPNLVAEVLK 170
>gb|ESW21012.1| hypothetical protein PHAVU_005G033500g [Phaseolus vulgaris]
Length = 715
Score = 98.6 bits (244), Expect = 8e-19
Identities = 49/109 (44%), Positives = 70/109 (64%), Gaps = 1/109 (0%)
Frame = +3
Query: 9 YFFYGHRKPSQNRPVVRGGRFSNRKVVASAPIDTAVLPTTDFREWDFDCXXXXXXXXXXX 188
YFFYGHRKPSQNRP VRGG FSNR+ + + + ++WD
Sbjct: 15 YFFYGHRKPSQNRPTVRGGLFSNRQTLTPSSKPNLKTKPFNIKDWD-PHFLSNPSPRSSP 73
Query: 189 XAIDRRLSPLARYVLDSFRRH-RRWCPEVLSDLRKLRRFPPDLVAEVLR 332
+ RLSP+AR+++D+FR++ +WCP V+++L+KLRR P+LVAEVL+
Sbjct: 74 PSPTLRLSPIARFIVDAFRKNDNKWCPNVVAELKKLRRVTPNLVAEVLK 122
>gb|EOY17580.1| Pentatricopeptide repeat (PPR-like) superfamily protein [Theobroma
cacao]
Length = 716
Score = 98.6 bits (244), Expect = 8e-19
Identities = 51/112 (45%), Positives = 71/112 (63%), Gaps = 2/112 (1%)
Frame = +3
Query: 3 RKYFFYGHRKPSQNRPVVRGGRFSNRKVVASAPIDTAVLPTTDFREWD-FDCXXXXXXXX 179
+ YFFYGHRKPSQNRPVV GG FSNR+++ + P P D R+WD +
Sbjct: 12 KPYFFYGHRKPSQNRPVVYGGLFSNRQILKTPPTPPQPSPPFDLRKWDPYYLSQNPSPPS 71
Query: 180 XXXXAIDRRLSPLARYVLDSFRRHR-RWCPEVLSDLRKLRRFPPDLVAEVLR 332
+R+LSP+AR+++D+FR+++ W P V+ +L KLRR LVAEVL+
Sbjct: 72 TPNPYQNRKLSPIARFIVDAFRKNQYTWGPTVVFELNKLRRVTASLVAEVLK 123
>ref|XP_006851711.1| hypothetical protein AMTR_s00040p00209940 [Amborella trichopoda]
gi|548855291|gb|ERN13178.1| hypothetical protein
AMTR_s00040p00209940 [Amborella trichopoda]
Length = 725
Score = 97.1 bits (240), Expect = 2e-18
Identities = 56/130 (43%), Positives = 72/130 (55%), Gaps = 13/130 (10%)
Frame = +3
Query: 9 YFFYGHRKPSQNRPVVRGGRFSNRKVVASA------PIDTAVLPTTDFREWDFDCXXXXX 170
YFFYG RKPSQ+RP+V GG F+NRK + P + T + W+ DC
Sbjct: 7 YFFYGRRKPSQSRPIVEGGLFTNRKTRGTVLPPLYKPNNKPPTKTFNPDLWNPDCITPKM 66
Query: 171 XXXXXXXA-------IDRRLSPLARYVLDSFRRHRRWCPEVLSDLRKLRRFPPDLVAEVL 329
+ R+LSP+ARYV D+ RRH W P+VLSDL KL R PP V E+L
Sbjct: 67 QTKTHSSSEPSSLSSASRKLSPIARYVCDTIRRHGTWGPQVLSDLNKLHRVPPSTVTEIL 126
Query: 330 RSRPLIDPSL 359
+S L++PSL
Sbjct: 127 KS-SLLNPSL 135
>ref|XP_006413862.1| hypothetical protein EUTSA_v10024515mg [Eutrema salsugineum]
gi|557115032|gb|ESQ55315.1| hypothetical protein
EUTSA_v10024515mg [Eutrema salsugineum]
Length = 735
Score = 96.3 bits (238), Expect = 4e-18
Identities = 56/118 (47%), Positives = 71/118 (60%), Gaps = 11/118 (9%)
Frame = +3
Query: 12 FFYGHRKPSQNRPVVRGGRFSNRKVVASAPIDT-----AVLPTTDFREWDFDC-----XX 161
FFYGHRKPSQNRPVV GG FSNR+ ++ P + A D R+WD +
Sbjct: 18 FFYGHRKPSQNRPVVHGGLFSNRQYLSRDPPQSPSNAVADRIPFDLRKWDPESRLPSERA 77
Query: 162 XXXXXXXXXXAIDRRLSPLARYVLDSFRRHR-RWCPEVLSDLRKLRRFPPDLVAEVLR 332
A RLSP+AR+VLD+FR++R RW P V+S+L KLRR P +VAEVL+
Sbjct: 78 SSSSPSTSISAASERLSPIARFVLDAFRKNRNRWGPSVVSELNKLRRVTPSIVAEVLK 135
>ref|XP_004229293.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20740-like [Solanum lycopersicum]
Length = 1256
Score = 95.9 bits (237), Expect = 5e-18
Identities = 54/126 (42%), Positives = 77/126 (61%), Gaps = 7/126 (5%)
Frame = +3
Query: 3 RKYFFYGHRKPSQNRPVVRGGRFSNRKVV-ASAPIDTAVLPTT--DFR--EWDFD--CXX 161
+ YFFYGHRKP+Q+RP V+GG FSNR+ + + + P T DF+ +WD D
Sbjct: 580 KPYFFYGHRKPTQHRPTVQGGLFSNRQTINPNLTTKNSPSPVTQGDFQLQKWDPDEVSGQ 639
Query: 162 XXXXXXXXXXAIDRRLSPLARYVLDSFRRHRRWCPEVLSDLRKLRRFPPDLVAEVLRSRP 341
++ +RLSP+ARY++DSFR+H +W +L+DL LRR P LV EVL+ P
Sbjct: 640 KSRDPSQEFFSLAQRLSPIARYIVDSFRKHGKWGAPLLADLNTLRRVTPKLVTEVLK-HP 698
Query: 342 LIDPSL 359
+DP +
Sbjct: 699 NLDPKI 704
>ref|XP_002513116.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223548127|gb|EEF49619.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 1128
Score = 95.1 bits (235), Expect = 8e-18
Identities = 51/120 (42%), Positives = 73/120 (60%), Gaps = 10/120 (8%)
Frame = +3
Query: 3 RKYFFYGHRKPSQNRPVVRGGRFSNRKVVASAPIDTAVLPTT----DFREWD-----FDC 155
+ YFFYGHRKPSQNRPVVRGG FSNR+++ ++ P D + WD
Sbjct: 453 KPYFFYGHRKPSQNRPVVRGGLFSNRQIIKP---QNSIKPKNPVPFDLQNWDPQNPCPSS 509
Query: 156 XXXXXXXXXXXXAIDRRLSPLARYVLDSFRRH-RRWCPEVLSDLRKLRRFPPDLVAEVLR 332
+ +RLSP++R++ D+FR++ +W P V+++LRKLRR PDLV+EVL+
Sbjct: 510 KSPPLSQNHSLSTLSQRLSPISRFIRDAFRKNSNKWGPPVVAELRKLRRVTPDLVSEVLK 569
>ref|XP_006345374.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20740-like [Solanum tuberosum]
Length = 720
Score = 94.4 bits (233), Expect = 1e-17
Identities = 52/126 (41%), Positives = 75/126 (59%), Gaps = 7/126 (5%)
Frame = +3
Query: 3 RKYFFYGHRKPSQNRPVVRGGRFSNRKVV---ASAPIDTAVLPTTDFR--EWDFD--CXX 161
+ YFFYGHRKP+Q+RP V+GG FSNR+ + + + + DF+ +WD D
Sbjct: 9 KPYFFYGHRKPTQHRPTVQGGLFSNRQTINPNRTTKNSPSSVTQGDFQLQKWDPDGVSGQ 68
Query: 162 XXXXXXXXXXAIDRRLSPLARYVLDSFRRHRRWCPEVLSDLRKLRRFPPDLVAEVLRSRP 341
++ +RLSP+ARY++DSFR+H W +L+DL LRR P LV EVL+ P
Sbjct: 69 QSRDPSQEFFSLAQRLSPIARYIVDSFRKHGNWGAPLLADLNSLRRVTPKLVTEVLK-HP 127
Query: 342 LIDPSL 359
+DP +
Sbjct: 128 NLDPKI 133
>ref|XP_006283187.1| hypothetical protein CARUB_v10004218mg, partial [Capsella rubella]
gi|482551892|gb|EOA16085.1| hypothetical protein
CARUB_v10004218mg, partial [Capsella rubella]
Length = 745
Score = 94.4 bits (233), Expect = 1e-17
Identities = 56/120 (46%), Positives = 71/120 (59%), Gaps = 13/120 (10%)
Frame = +3
Query: 12 FFYGHRKPSQNRPVVRGGRFSNRKVV---ASAPIDTAVLPTT--DFREWDFD-------C 155
FFYGHRKPSQNRP+V GG FSNR+ + + P AV T D R+WD +
Sbjct: 32 FFYGHRKPSQNRPIVYGGLFSNRQSLSRDSPQPQSNAVAHRTPFDLRKWDPESHLPSERA 91
Query: 156 XXXXXXXXXXXXAIDRRLSPLARYVLDSFRRHR-RWCPEVLSDLRKLRRFPPDLVAEVLR 332
A RLSP+AR+VLD+FR++R W P V+S+L KLRR P +VAEVL+
Sbjct: 92 SSSPPSHSTGISAASERLSPIARFVLDAFRKNRNHWGPSVVSELNKLRRVTPSIVAEVLK 151
>ref|XP_004511291.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20740-like isoform X1 [Cicer arietinum]
gi|502158821|ref|XP_004511292.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g20740-like isoform X2 [Cicer arietinum]
gi|502158825|ref|XP_004511293.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g20740-like isoform X3 [Cicer arietinum]
Length = 720
Score = 94.0 bits (232), Expect = 2e-17
Identities = 50/115 (43%), Positives = 72/115 (62%), Gaps = 7/115 (6%)
Frame = +3
Query: 9 YFFYGHRKPSQNRPVVRGGRFSNRKVVASAPIDTAVLPTTDFREWD------FDCXXXXX 170
YF+YGHRKPSQNRP VRGG FSNR+ + + P T + ++WD +
Sbjct: 13 YFYYGHRKPSQNRPTVRGGLFSNRQTL-TPPKPTTTSRPFEIQKWDPHFLSQQNPSPPPP 71
Query: 171 XXXXXXXAIDRRLSPLARYVLDSFRRH-RRWCPEVLSDLRKLRRFPPDLVAEVLR 332
+ RLSP+AR+++D+FR++ +W P V+++L KLRR PP+LVAEVL+
Sbjct: 72 PSPEASFSASLRLSPIARFIVDAFRKNGYKWGPSVIAELNKLRRVPPNLVAEVLK 126
>ref|XP_004494981.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20740-like [Cicer arietinum]
Length = 720
Score = 94.0 bits (232), Expect = 2e-17
Identities = 50/115 (43%), Positives = 71/115 (61%), Gaps = 7/115 (6%)
Frame = +3
Query: 9 YFFYGHRKPSQNRPVVRGGRFSNRKVVASAPIDTAVLPTTDFREWDFDCXXXXXXXXXXX 188
YF+YGHRKPSQNRP VRGG FSNR+ + T P + ++WD
Sbjct: 13 YFYYGHRKPSQNRPTVRGGLFSNRQTLTPPKSKTTSRP-FEIQKWDPHFLSQQNPSPPPS 71
Query: 189 XAIDR------RLSPLARYVLDSFRRHR-RWCPEVLSDLRKLRRFPPDLVAEVLR 332
+ + RLSP+AR+++D+FR++ +W P V+++L KLRR PP+LVAEVL+
Sbjct: 72 PSSEASFSPSLRLSPIARFIVDAFRKNSYKWGPSVITELNKLRRVPPNLVAEVLK 126
>ref|XP_003598903.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355487951|gb|AES69154.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 767
Score = 93.6 bits (231), Expect = 2e-17
Identities = 54/118 (45%), Positives = 70/118 (59%), Gaps = 10/118 (8%)
Frame = +3
Query: 9 YFFYGHRKPSQNRPVVRGGRFSNRKVVASAPIDTAVLPTTDF--REWD-------FDCXX 161
YFFYGHRKPSQNRP VRGG FSNRK + + P + PT F ++WD
Sbjct: 13 YFFYGHRKPSQNRPTVRGGLFSNRKTL-TPPKPKSTKPTNSFQIQKWDPHFLSQPNSPSP 71
Query: 162 XXXXXXXXXXAIDRRLSPLARYVLDSFRR-HRRWCPEVLSDLRKLRRFPPDLVAEVLR 332
+ RLSP+AR++LD+FR+ + W P V+++L KLRR P LVAEVL+
Sbjct: 72 SPSPSPEATFSASLRLSPIARFILDAFRKNNNNWGPPVVTELNKLRRVTPTLVAEVLK 129
>gb|EAZ02971.1| hypothetical protein OsI_25111 [Oryza sativa Indica Group]
Length = 728
Score = 93.6 bits (231), Expect = 2e-17
Identities = 52/125 (41%), Positives = 70/125 (56%), Gaps = 6/125 (4%)
Frame = +3
Query: 3 RKYFFYGHRKPSQNRPVVRGGRFSNRKVVASA------PIDTAVLPTTDFREWDFDCXXX 164
R ++GHR+PS +RP VRGG FS + +A P ++ +WD
Sbjct: 18 RTTVYHGHRRPSPHRPTVRGGVFSYLRATTAASSQPRPPSSSSSSAPFRLADWDPSSSSS 77
Query: 165 XXXXXXXXXAIDRRLSPLARYVLDSFRRHRRWCPEVLSDLRKLRRFPPDLVAEVLRSRPL 344
A RRLSPLAR++LD+ RRH+RW P V+++L KLRR P+LVAEVL +RP
Sbjct: 78 SSTPSPSATAAARRLSPLARFLLDALRRHQRWGPPVVAELTKLRRVAPELVAEVLSARPP 137
Query: 345 IDPSL 359
P L
Sbjct: 138 PPPPL 142
>ref|XP_002459421.1| hypothetical protein SORBIDRAFT_02g004410 [Sorghum bicolor]
gi|241922798|gb|EER95942.1| hypothetical protein
SORBIDRAFT_02g004410 [Sorghum bicolor]
Length = 735
Score = 91.7 bits (226), Expect = 9e-17
Identities = 53/129 (41%), Positives = 69/129 (53%), Gaps = 10/129 (7%)
Frame = +3
Query: 3 RKYFFYGHRKPSQNRPVVRGGRFSNRKV---VASAPIDTAVLPTTDFREWD-------FD 152
R ++GHR+ S +RP VRGG F++ + + P A R+WD
Sbjct: 21 RHTIYHGHRRASPHRPTVRGGLFTDLRFPSPIPRPPPSPATATAFRLRDWDPHSPYSPSS 80
Query: 153 CXXXXXXXXXXXXAIDRRLSPLARYVLDSFRRHRRWCPEVLSDLRKLRRFPPDLVAEVLR 332
A RRLSPLAR++LD+ RRH+RW P V++DL KLRR PP LVAEVL
Sbjct: 81 APSPSASASSSTSASARRLSPLARFLLDALRRHQRWGPPVVADLSKLRRVPPSLVAEVLT 140
Query: 333 SRPLIDPSL 359
+RP P L
Sbjct: 141 ARPPPPPPL 149
>ref|NP_193806.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75211707|sp|Q9SVH3.1|PP328_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At4g20740 gi|5262214|emb|CAB45840.1| putative protein
[Arabidopsis thaliana] gi|7268870|emb|CAB79074.1|
putative protein [Arabidopsis thaliana]
gi|332658957|gb|AEE84357.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 727
Score = 91.7 bits (226), Expect = 9e-17
Identities = 54/116 (46%), Positives = 70/116 (60%), Gaps = 9/116 (7%)
Frame = +3
Query: 12 FFYGHRKPSQNRPVVRGGRFSNRKV---VASAPIDTAVLPTT--DFREWDFDCXXXXXXX 176
FF+GHRKPSQNRP V GG FSNR+ V+ P ++ T D R+WD +
Sbjct: 18 FFHGHRKPSQNRPTVYGGLFSNRQSIPRVSPQPQSNSLAHRTPFDLRKWDPETHLPPPSP 77
Query: 177 XXXXXAI---DRRLSPLARYVLDSFRRHR-RWCPEVLSDLRKLRRFPPDLVAEVLR 332
I RLSP+AR+VLD+FR++R W P V+S+L KLRR P +VAEVL+
Sbjct: 78 PSHSTVISAASERLSPIARFVLDAFRKNRNHWGPSVVSELNKLRRVTPSIVAEVLK 133
>ref|XP_004511294.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20740-like isoform X4 [Cicer arietinum]
Length = 671
Score = 90.5 bits (223), Expect = 2e-16
Identities = 48/113 (42%), Positives = 70/113 (61%), Gaps = 7/113 (6%)
Frame = +3
Query: 9 YFFYGHRKPSQNRPVVRGGRFSNRKVVASAPIDTAVLPTTDFREWD------FDCXXXXX 170
YF+YGHRKPSQNRP VRGG FSNR+ + + P T + ++WD +
Sbjct: 13 YFYYGHRKPSQNRPTVRGGLFSNRQTL-TPPKPTTTSRPFEIQKWDPHFLSQQNPSPPPP 71
Query: 171 XXXXXXXAIDRRLSPLARYVLDSFRRH-RRWCPEVLSDLRKLRRFPPDLVAEV 326
+ RLSP+AR+++D+FR++ +W P V+++L KLRR PP+LVAE+
Sbjct: 72 PSPEASFSASLRLSPIARFIVDAFRKNGYKWGPSVIAELNKLRRVPPNLVAEL 124