BLASTX nr result
ID: Zingiber25_contig00031435
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00031435
(348 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004960145.1| PREDICTED: ribosomal RNA processing protein ... 98 1e-18
ref|XP_004960144.1| PREDICTED: ribosomal RNA processing protein ... 98 1e-18
gb|EMT22849.1| hypothetical protein F775_26456 [Aegilops tauschii] 97 2e-18
gb|EMS61905.1| Ribosomal RNA processing protein 1-like protein [... 97 2e-18
gb|EAY95889.1| hypothetical protein OsI_17752 [Oryza sativa Indi... 96 6e-18
emb|CAH67793.1| OSIGBa0132E09-OSIGBa0108L24.7 [Oryza sativa Indi... 96 6e-18
ref|NP_001054129.1| Os04g0658600 [Oryza sativa Japonica Group] g... 96 6e-18
gb|AAL87179.1|AF480497_7 unknown [Oryza sativa Japonica Group] g... 96 6e-18
gb|AAM13441.1|AF474072_3 similar to H. sapiens NNP-1 / Nop52 AP0... 95 8e-18
dbj|BAK01437.1| predicted protein [Hordeum vulgare subsp. vulgare] 95 1e-17
dbj|BAK03447.1| predicted protein [Hordeum vulgare subsp. vulgare] 95 1e-17
ref|XP_003580721.1| PREDICTED: ribosomal RNA processing protein ... 94 1e-17
ref|XP_006653840.1| PREDICTED: ribosomal RNA processing protein ... 94 2e-17
gb|ACF84537.1| unknown [Zea mays] gi|414585018|tpg|DAA35589.1| T... 94 2e-17
ref|XP_006845716.1| hypothetical protein AMTR_s00019p00242560 [A... 93 4e-17
ref|NP_001151553.1| nucleolar protein,Nop52 containing protein [... 93 4e-17
gb|EOY15658.1| Ribosomal RNA processing protein 1 B, putative [T... 90 3e-16
ref|XP_006400621.1| hypothetical protein EUTSA_v10013208mg [Eutr... 89 5e-16
gb|AFK47703.1| unknown [Medicago truncatula] 89 6e-16
ref|XP_003610521.1| Ribosomal RNA processing protein-like protei... 89 6e-16
>ref|XP_004960145.1| PREDICTED: ribosomal RNA processing protein 1 homolog B-like
isoform X2 [Setaria italica]
Length = 499
Score = 97.8 bits (242), Expect = 1e-18
Identities = 46/111 (41%), Positives = 71/111 (63%)
Frame = +3
Query: 15 ANGVKYHVSEAFLDETNDLLPLVVNTLELVIKPFILVLEKTADKVLVNKIKVNIFDRFLE 194
+ G+ YHV+EAFLDE +LP+ + T++ ++ PF VLEK++D+V+V+K+K +FDRFLE
Sbjct: 165 SRGLGYHVAEAFLDELLPVLPVSLQTMDALLAPFFTVLEKSSDRVMVSKVKAGVFDRFLE 224
Query: 195 NGRKLLNPMKTEDQXXXXXXXXXXXXIALLLAFSKMFFDAASASETLQGNR 347
+G +LL +K ++ LL FSK F D + +ET+Q NR
Sbjct: 225 SGNQLLEKVKKGEEVEKGSAEEKLGKAGLLFGFSKRFLDIGAKAETVQSNR 275
>ref|XP_004960144.1| PREDICTED: ribosomal RNA processing protein 1 homolog B-like
isoform X1 [Setaria italica]
Length = 563
Score = 97.8 bits (242), Expect = 1e-18
Identities = 46/111 (41%), Positives = 71/111 (63%)
Frame = +3
Query: 15 ANGVKYHVSEAFLDETNDLLPLVVNTLELVIKPFILVLEKTADKVLVNKIKVNIFDRFLE 194
+ G+ YHV+EAFLDE +LP+ + T++ ++ PF VLEK++D+V+V+K+K +FDRFLE
Sbjct: 165 SRGLGYHVAEAFLDELLPVLPVSLQTMDALLAPFFTVLEKSSDRVMVSKVKAGVFDRFLE 224
Query: 195 NGRKLLNPMKTEDQXXXXXXXXXXXXIALLLAFSKMFFDAASASETLQGNR 347
+G +LL +K ++ LL FSK F D + +ET+Q NR
Sbjct: 225 SGNQLLEKVKKGEEVEKGSAEEKLGKAGLLFGFSKRFLDIGAKAETVQSNR 275
>gb|EMT22849.1| hypothetical protein F775_26456 [Aegilops tauschii]
Length = 469
Score = 97.1 bits (240), Expect = 2e-18
Identities = 46/115 (40%), Positives = 73/115 (63%)
Frame = +3
Query: 3 DNYLANGVKYHVSEAFLDETNDLLPLVVNTLELVIKPFILVLEKTADKVLVNKIKVNIFD 182
DN G+ YHV++ FLDE +LP+ + ++EL++ PF VLEK+ D+VLV+K++ ++F+
Sbjct: 71 DNATGRGLGYHVADVFLDEILPVLPVSLQSMELLLAPFFTVLEKSTDRVLVSKVRSSLFE 130
Query: 183 RFLENGRKLLNPMKTEDQXXXXXXXXXXXXIALLLAFSKMFFDAASASETLQGNR 347
RFLE+G +LL + + + LL FSK F D +++ET+QGNR
Sbjct: 131 RFLESGSQLLEMARKGEGVEKGSVEEKLGKVGLLFGFSKRFLDIGASAETVQGNR 185
>gb|EMS61905.1| Ribosomal RNA processing protein 1-like protein [Triticum urartu]
Length = 522
Score = 97.1 bits (240), Expect = 2e-18
Identities = 45/115 (39%), Positives = 74/115 (64%)
Frame = +3
Query: 3 DNYLANGVKYHVSEAFLDETNDLLPLVVNTLELVIKPFILVLEKTADKVLVNKIKVNIFD 182
DN G+ YHV++ FLDE +LP+ + ++EL++ PF VLEK+ D+VLV+K++ ++F+
Sbjct: 124 DNATGRGLGYHVADVFLDEILPVLPVSLKSMELLLAPFFTVLEKSTDRVLVSKVRSSLFE 183
Query: 183 RFLENGRKLLNPMKTEDQXXXXXXXXXXXXIALLLAFSKMFFDAASASETLQGNR 347
RFLE+G +LL + ++ + LL FSK F D ++++T+QGNR
Sbjct: 184 RFLESGSQLLEMTRKGEEMEKGSVEEKLGKVGLLFGFSKRFLDIGASAKTVQGNR 238
>gb|EAY95889.1| hypothetical protein OsI_17752 [Oryza sativa Indica Group]
Length = 557
Score = 95.5 bits (236), Expect = 6e-18
Identities = 45/109 (41%), Positives = 71/109 (65%)
Frame = +3
Query: 21 GVKYHVSEAFLDETNDLLPLVVNTLELVIKPFILVLEKTADKVLVNKIKVNIFDRFLENG 200
G+ YHV+E FLDE + +LP+ + T+E+++ PF VLEK++D+V+V K+K ++F+RFLE+G
Sbjct: 169 GLGYHVAEVFLDELSPVLPVSLQTMEVLLSPFFAVLEKSSDRVMVAKVKSSVFERFLESG 228
Query: 201 RKLLNPMKTEDQXXXXXXXXXXXXIALLLAFSKMFFDAASASETLQGNR 347
++LL K + + LL FSK F D + +ET+Q NR
Sbjct: 229 KQLLEMAKKGEGVEKGSADEKIGKVGLLFGFSKRFSDIGAKAETVQANR 277
>emb|CAH67793.1| OSIGBa0132E09-OSIGBa0108L24.7 [Oryza sativa Indica Group]
Length = 558
Score = 95.5 bits (236), Expect = 6e-18
Identities = 45/109 (41%), Positives = 71/109 (65%)
Frame = +3
Query: 21 GVKYHVSEAFLDETNDLLPLVVNTLELVIKPFILVLEKTADKVLVNKIKVNIFDRFLENG 200
G+ YHV+E FLDE + +LP+ + T+E+++ PF VLEK++D+V+V K+K ++F+RFLE+G
Sbjct: 170 GLGYHVAEVFLDELSPVLPVSLQTMEVLLSPFFAVLEKSSDRVMVAKVKSSVFERFLESG 229
Query: 201 RKLLNPMKTEDQXXXXXXXXXXXXIALLLAFSKMFFDAASASETLQGNR 347
++LL K + + LL FSK F D + +ET+Q NR
Sbjct: 230 KQLLEMAKKGEGVEKGSADEKIGKVGLLFGFSKRFSDIGAKAETVQANR 278
>ref|NP_001054129.1| Os04g0658600 [Oryza sativa Japonica Group]
gi|113565700|dbj|BAF16043.1| Os04g0658600, partial
[Oryza sativa Japonica Group]
Length = 550
Score = 95.5 bits (236), Expect = 6e-18
Identities = 45/109 (41%), Positives = 71/109 (65%)
Frame = +3
Query: 21 GVKYHVSEAFLDETNDLLPLVVNTLELVIKPFILVLEKTADKVLVNKIKVNIFDRFLENG 200
G+ YHV+E FLDE + +LP+ + T+E+++ PF VLEK++D+V+V K+K ++F+RFLE+G
Sbjct: 161 GLGYHVAEVFLDELSPVLPVSLQTMEVLLSPFFAVLEKSSDRVMVAKVKSSVFERFLESG 220
Query: 201 RKLLNPMKTEDQXXXXXXXXXXXXIALLLAFSKMFFDAASASETLQGNR 347
++LL K + + LL FSK F D + +ET+Q NR
Sbjct: 221 KQLLEMAKKGEGVEKGSADEKIGKVGLLFGFSKRFSDIGAKAETVQANR 269
>gb|AAL87179.1|AF480497_7 unknown [Oryza sativa Japonica Group] gi|38346404|emb|CAE04237.2|
OSJNBa0011F23.10 [Oryza sativa Japonica Group]
gi|222629700|gb|EEE61832.1| hypothetical protein
OsJ_16477 [Oryza sativa Japonica Group]
Length = 558
Score = 95.5 bits (236), Expect = 6e-18
Identities = 45/109 (41%), Positives = 71/109 (65%)
Frame = +3
Query: 21 GVKYHVSEAFLDETNDLLPLVVNTLELVIKPFILVLEKTADKVLVNKIKVNIFDRFLENG 200
G+ YHV+E FLDE + +LP+ + T+E+++ PF VLEK++D+V+V K+K ++F+RFLE+G
Sbjct: 169 GLGYHVAEVFLDELSPVLPVSLQTMEVLLSPFFAVLEKSSDRVMVAKVKSSVFERFLESG 228
Query: 201 RKLLNPMKTEDQXXXXXXXXXXXXIALLLAFSKMFFDAASASETLQGNR 347
++LL K + + LL FSK F D + +ET+Q NR
Sbjct: 229 KQLLEMAKKGEGVEKGSADEKIGKVGLLFGFSKRFSDIGAKAETVQANR 277
>gb|AAM13441.1|AF474072_3 similar to H. sapiens NNP-1 / Nop52 AP001752 (Score = 92; E= 9e-18)
[Hordeum vulgare subsp. vulgare]
Length = 556
Score = 95.1 bits (235), Expect = 8e-18
Identities = 45/115 (39%), Positives = 72/115 (62%)
Frame = +3
Query: 3 DNYLANGVKYHVSEAFLDETNDLLPLVVNTLELVIKPFILVLEKTADKVLVNKIKVNIFD 182
DN G+ YHV++ FLDE +LP+ + ++EL++ PF VLEK+ D+VLV+K++ ++F+
Sbjct: 157 DNATGRGLGYHVADVFLDEILPMLPVSLQSMELLLAPFFTVLEKSTDRVLVSKVRSSLFE 216
Query: 183 RFLENGRKLLNPMKTEDQXXXXXXXXXXXXIALLLAFSKMFFDAASASETLQGNR 347
RFL +G +LL + ++ + LL FSK F D + +ET+QGNR
Sbjct: 217 RFLVSGSQLLEMTRKGEEVEKGSVEEKLGQVGLLFGFSKRFLDIGANAETVQGNR 271
>dbj|BAK01437.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 556
Score = 94.7 bits (234), Expect = 1e-17
Identities = 45/115 (39%), Positives = 72/115 (62%)
Frame = +3
Query: 3 DNYLANGVKYHVSEAFLDETNDLLPLVVNTLELVIKPFILVLEKTADKVLVNKIKVNIFD 182
DN G+ YHV++ FLDE +LP+ + ++EL++ PF VLEK+ D+VLV+K++ ++F+
Sbjct: 157 DNATGRGLGYHVADVFLDEILPVLPVSLQSMELLLAPFFTVLEKSTDRVLVSKVRSSLFE 216
Query: 183 RFLENGRKLLNPMKTEDQXXXXXXXXXXXXIALLLAFSKMFFDAASASETLQGNR 347
RFL +G +LL + ++ + LL FSK F D + +ET+QGNR
Sbjct: 217 RFLVSGSQLLEMTRKGEEVEKGSVEEKLGQVGLLFGFSKRFLDIGANAETVQGNR 271
>dbj|BAK03447.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 556
Score = 94.7 bits (234), Expect = 1e-17
Identities = 45/115 (39%), Positives = 72/115 (62%)
Frame = +3
Query: 3 DNYLANGVKYHVSEAFLDETNDLLPLVVNTLELVIKPFILVLEKTADKVLVNKIKVNIFD 182
DN G+ YHV++ FLDE +LP+ + ++EL++ PF VLEK+ D+VLV+K++ ++F+
Sbjct: 157 DNATGRGLGYHVADVFLDEILPVLPVSLQSMELLLAPFFTVLEKSTDRVLVSKVRSSLFE 216
Query: 183 RFLENGRKLLNPMKTEDQXXXXXXXXXXXXIALLLAFSKMFFDAASASETLQGNR 347
RFL +G +LL + ++ + LL FSK F D + +ET+QGNR
Sbjct: 217 RFLVSGSQLLEMTRKGEEVEKGSVEEKLGQVGLLFGFSKRFLDIGANAETVQGNR 271
>ref|XP_003580721.1| PREDICTED: ribosomal RNA processing protein 1 homolog [Brachypodium
distachyon]
Length = 564
Score = 94.4 bits (233), Expect = 1e-17
Identities = 46/111 (41%), Positives = 70/111 (63%)
Frame = +3
Query: 15 ANGVKYHVSEAFLDETNDLLPLVVNTLELVIKPFILVLEKTADKVLVNKIKVNIFDRFLE 194
+ G+ YHV++AF+DE +LP+ + ++EL++ PF VLEK+ D+VLVNK++ N+F+RFLE
Sbjct: 165 SRGLGYHVADAFVDELLPVLPVSLQSMELLLAPFFTVLEKSTDRVLVNKVRSNLFERFLE 224
Query: 195 NGRKLLNPMKTEDQXXXXXXXXXXXXIALLLAFSKMFFDAASASETLQGNR 347
+G +LL MK + + LL FSK F D + ET+ NR
Sbjct: 225 SGNQLLEMMKKGVEVENGSAEEKLGKVGLLFGFSKRFLDIGANVETVLANR 275
>ref|XP_006653840.1| PREDICTED: ribosomal RNA processing protein 1 homolog B-like,
partial [Oryza brachyantha]
Length = 523
Score = 94.0 bits (232), Expect = 2e-17
Identities = 47/109 (43%), Positives = 69/109 (63%)
Frame = +3
Query: 21 GVKYHVSEAFLDETNDLLPLVVNTLELVIKPFILVLEKTADKVLVNKIKVNIFDRFLENG 200
G+ YHV++ FLDE LLP+ + T+EL++ PF VLEK++D+V+V K+K ++F+RFLE+G
Sbjct: 132 GLGYHVADVFLDELLPLLPVSLPTMELLLSPFFTVLEKSSDRVMVAKVKSSVFERFLESG 191
Query: 201 RKLLNPMKTEDQXXXXXXXXXXXXIALLLAFSKMFFDAASASETLQGNR 347
++LL K + I LL FSK F D + ET+Q NR
Sbjct: 192 KQLLEMAKKGEGVEKGSAEEKLGKIGLLFGFSKRFSDIGAKPETVQANR 240
>gb|ACF84537.1| unknown [Zea mays] gi|414585018|tpg|DAA35589.1| TPA: nucleolar
protein,Nop52 containing protein [Zea mays]
Length = 550
Score = 93.6 bits (231), Expect = 2e-17
Identities = 43/111 (38%), Positives = 70/111 (63%)
Frame = +3
Query: 15 ANGVKYHVSEAFLDETNDLLPLVVNTLELVIKPFILVLEKTADKVLVNKIKVNIFDRFLE 194
+ G+ YHV+EAFLDE +LP+ + T++ ++ PF VLEK+ D+V+V+K+K +F+R L+
Sbjct: 164 SRGLGYHVAEAFLDELLPVLPVSLETMDTLLAPFFTVLEKSTDRVMVSKVKAGVFERLLD 223
Query: 195 NGRKLLNPMKTEDQXXXXXXXXXXXXIALLLAFSKMFFDAASASETLQGNR 347
+G +LL +K ++ + LL FSK F D + +ET+Q NR
Sbjct: 224 SGSRLLEMVKKGEEVEKGDAEEKLGKVGLLFGFSKRFLDIGAMAETVQSNR 274
>ref|XP_006845716.1| hypothetical protein AMTR_s00019p00242560 [Amborella trichopoda]
gi|548848288|gb|ERN07391.1| hypothetical protein
AMTR_s00019p00242560 [Amborella trichopoda]
Length = 725
Score = 92.8 bits (229), Expect = 4e-17
Identities = 45/115 (39%), Positives = 68/115 (59%)
Frame = +3
Query: 3 DNYLANGVKYHVSEAFLDETNDLLPLVVNTLELVIKPFILVLEKTADKVLVNKIKVNIFD 182
D Y ANGV YH++E FL E + LPL + ++++PF++VLE++ KVL+ K+K ++FD
Sbjct: 155 DKYHANGVNYHIAEIFLSEIKEFLPLNLEVFSVILEPFVVVLERSMYKVLIKKVKSDVFD 214
Query: 183 RFLENGRKLLNPMKTEDQXXXXXXXXXXXXIALLLAFSKMFFDAASASETLQGNR 347
LE G+KLL E+ +A + S F D+AS+S T+Q NR
Sbjct: 215 FLLEKGKKLLKLKGGEECGDCNLEVENFGKVAFSIGLSARFLDSASSSTTIQSNR 269
>ref|NP_001151553.1| nucleolar protein,Nop52 containing protein [Zea mays]
gi|195647654|gb|ACG43295.1| nucleolar protein,Nop52
containing protein [Zea mays]
Length = 559
Score = 92.8 bits (229), Expect = 4e-17
Identities = 43/111 (38%), Positives = 69/111 (62%)
Frame = +3
Query: 15 ANGVKYHVSEAFLDETNDLLPLVVNTLELVIKPFILVLEKTADKVLVNKIKVNIFDRFLE 194
+ G+ YHV+EAFLDE +LP+ + T++ ++ PF VLEK+ D+V+V+K+K +F+R L+
Sbjct: 164 SRGLGYHVAEAFLDELLPVLPVSLETMDTLLAPFFTVLEKSTDRVMVSKVKAGVFERLLD 223
Query: 195 NGRKLLNPMKTEDQXXXXXXXXXXXXIALLLAFSKMFFDAASASETLQGNR 347
+G +LL +K + + LL FSK F D + +ET+Q NR
Sbjct: 224 SGSRLLEMVKKGEDVEKGDPEEKLGKVGLLFGFSKRFLDIGAMAETVQSNR 274
>gb|EOY15658.1| Ribosomal RNA processing protein 1 B, putative [Theobroma cacao]
Length = 559
Score = 90.1 bits (222), Expect = 3e-16
Identities = 41/115 (35%), Positives = 69/115 (60%)
Frame = +3
Query: 3 DNYLANGVKYHVSEAFLDETNDLLPLVVNTLELVIKPFILVLEKTADKVLVNKIKVNIFD 182
D + NGV YH++ FL+E LP+ +E++++PF+ ++ K DKVLV KI+ N+FD
Sbjct: 153 DKFQGNGVNYHIASIFLEEIRPFLPVKKEVVEVLLEPFVGIMGKVGDKVLVGKIRSNVFD 212
Query: 183 RFLENGRKLLNPMKTEDQXXXXXXXXXXXXIALLLAFSKMFFDAASASETLQGNR 347
F++ GR+ L ++ D+ I+LL+ FS F++ S+++ QGNR
Sbjct: 213 VFVKMGRRFLELKRSGDEVDEGEDLVVLGTISLLMGFSAKFYELGSSADCCQGNR 267
>ref|XP_006400621.1| hypothetical protein EUTSA_v10013208mg [Eutrema salsugineum]
gi|557101711|gb|ESQ42074.1| hypothetical protein
EUTSA_v10013208mg [Eutrema salsugineum]
Length = 535
Score = 89.4 bits (220), Expect = 5e-16
Identities = 47/116 (40%), Positives = 67/116 (57%), Gaps = 1/116 (0%)
Frame = +3
Query: 3 DNYLANGVKYHVSEAFLDETNDLLPLVVNTLELVIKPFILVLEKTADKVLVNKIKVNIFD 182
D + NGV YH++ AF++E LPL LEL+ PF+ +L DK+LV KIK N+FD
Sbjct: 164 DKFQGNGVNYHIASAFVEELRSFLPLRKEVLELLFAPFVTILGVVNDKILVAKIKSNLFD 223
Query: 183 RFLENGRKLLNPMKT-EDQXXXXXXXXXXXXIALLLAFSKMFFDAASASETLQGNR 347
FL+ G+KLL+ K+ D IAL + F+K F++ S+ + QGNR
Sbjct: 224 EFLKMGKKLLDIKKSGNDTESEDDDVLVLGSIALSMEFAKRFYEMGSSPDCHQGNR 279
>gb|AFK47703.1| unknown [Medicago truncatula]
Length = 546
Score = 89.0 bits (219), Expect = 6e-16
Identities = 46/109 (42%), Positives = 63/109 (57%)
Frame = +3
Query: 21 GVKYHVSEAFLDETNDLLPLVVNTLELVIKPFILVLEKTADKVLVNKIKVNIFDRFLENG 200
GV YHV+ FLDE LP+ V+ LE++ KPF V+ K DKVL+ KIK+ +FD L+NG
Sbjct: 161 GVNYHVASVFLDELTPFLPVKVSVLEVLFKPFFTVVGKLPDKVLLGKIKIGLFDVLLKNG 220
Query: 201 RKLLNPMKTEDQXXXXXXXXXXXXIALLLAFSKMFFDAASASETLQGNR 347
+KLL K+ IAL + F+ F+ SA + +QGNR
Sbjct: 221 KKLLEIKKSGGDEVADGDIVNLGTIALGMGFASKLFELGSAPDCVQGNR 269
>ref|XP_003610521.1| Ribosomal RNA processing protein-like protein [Medicago truncatula]
gi|355511576|gb|AES92718.1| Ribosomal RNA processing
protein-like protein [Medicago truncatula]
Length = 546
Score = 89.0 bits (219), Expect = 6e-16
Identities = 46/109 (42%), Positives = 63/109 (57%)
Frame = +3
Query: 21 GVKYHVSEAFLDETNDLLPLVVNTLELVIKPFILVLEKTADKVLVNKIKVNIFDRFLENG 200
GV YHV+ FLDE LP+ V+ LE++ KPF V+ K DKVL+ KIK+ +FD L+NG
Sbjct: 161 GVNYHVASVFLDELTPFLPVKVSVLEVLFKPFFTVVGKLPDKVLLGKIKIGLFDVLLKNG 220
Query: 201 RKLLNPMKTEDQXXXXXXXXXXXXIALLLAFSKMFFDAASASETLQGNR 347
+KLL K+ IAL + F+ F+ SA + +QGNR
Sbjct: 221 KKLLEIKKSGGDEVADGDIVNLGTIALGMGFASKLFELGSAPDCVQGNR 269