BLASTX nr result
ID: Zingiber25_contig00031417
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00031417
(487 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006653850.1| PREDICTED: zinc finger CCCH domain-containin... 76 4e-12
ref|XP_003580756.1| PREDICTED: zinc finger CCCH domain-containin... 72 1e-10
dbj|BAK01055.1| predicted protein [Hordeum vulgare subsp. vulgare] 72 1e-10
gb|EMT31378.1| Zinc finger CCCH domain-containing protein 30 [Ae... 71 1e-10
gb|EMS45250.1| Zinc finger CCCH domain-containing protein 30 [Tr... 71 1e-10
gb|EEE61849.1| hypothetical protein OsJ_16516 [Oryza sativa Japo... 71 1e-10
gb|EEC78190.1| hypothetical protein OsI_17796 [Oryza sativa Indi... 71 1e-10
sp|Q7XM16.3|C3H30_ORYSJ RecName: Full=Zinc finger CCCH domain-co... 71 1e-10
emb|CAH66888.1| OSIGBa0099L20.3 [Oryza sativa Indica Group] 71 1e-10
ref|NP_001054162.1| Os04g0663200 [Oryza sativa Japonica Group] g... 71 1e-10
emb|CAE04843.2| OSJNBa0084K01.15 [Oryza sativa Japonica Group] 71 1e-10
ref|XP_002510504.1| nucleic acid binding protein, putative [Rici... 69 5e-10
gb|ACN25297.1| unknown [Zea mays] gi|413919841|gb|AFW59773.1| zi... 68 1e-09
gb|AAO14624.2|AF467900_1 hypothetical protein [Prunus persica] g... 67 2e-09
ref|XP_004960188.1| PREDICTED: zinc finger CCCH domain-containin... 67 2e-09
ref|XP_002448705.1| hypothetical protein SORBIDRAFT_06g031850 [S... 67 2e-09
ref|XP_004291394.1| PREDICTED: zinc finger CCCH domain-containin... 66 5e-09
ref|XP_003523552.1| PREDICTED: zinc finger CCCH domain-containin... 65 7e-09
ref|XP_002277913.1| PREDICTED: zinc finger CCCH domain-containin... 65 7e-09
ref|XP_004960189.1| PREDICTED: zinc finger CCCH domain-containin... 65 9e-09
>ref|XP_006653850.1| PREDICTED: zinc finger CCCH domain-containing protein 30-like
[Oryza brachyantha]
Length = 555
Score = 76.3 bits (186), Expect = 4e-12
Identities = 38/71 (53%), Positives = 50/71 (70%), Gaps = 2/71 (2%)
Frame = -2
Query: 477 GNVDIVNGSGH-QREARPKIPRPCAFFNTPKGCRHGANCSYQHDPSLPPR-TQQPRGSKR 304
G VD +NG+ R+A+ + +PCA+FN PKGCR+GANC++ HD S P R Q+ +GSKR
Sbjct: 485 GGVDGINGASMVSRDAKVRPMKPCAYFNGPKGCRNGANCTFLHDASAPTRKDQKQKGSKR 544
Query: 303 IKLDGGIVYRN 271
IKLD I RN
Sbjct: 545 IKLDNAIGGRN 555
>ref|XP_003580756.1| PREDICTED: zinc finger CCCH domain-containing protein 30-like
[Brachypodium distachyon]
Length = 454
Score = 71.6 bits (174), Expect = 1e-10
Identities = 31/57 (54%), Positives = 42/57 (73%)
Frame = -2
Query: 441 REARPKIPRPCAFFNTPKGCRHGANCSYQHDPSLPPRTQQPRGSKRIKLDGGIVYRN 271
R+ + + + CA+FN P+GCR+GANC++ HD S R +Q +GSKRIKLD GIV RN
Sbjct: 398 RDTKSRPMKLCAYFNGPRGCRNGANCAFLHDASATSRQEQQKGSKRIKLDNGIVGRN 454
>dbj|BAK01055.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 528
Score = 71.6 bits (174), Expect = 1e-10
Identities = 34/68 (50%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Frame = -2
Query: 471 VDIVNGSG-HQREARPKIPRPCAFFNTPKGCRHGANCSYQHDPSLPPRTQQPRGSKRIKL 295
+D +NG+ R+ + + RPCA+FN P+GCR+GANC++ HD S PP QQ SKR+KL
Sbjct: 462 IDAMNGASVTNRDMKTRPTRPCAYFNGPRGCRNGANCTFLHDSS-PPSRQQENDSKRLKL 520
Query: 294 DGGIVYRN 271
D I RN
Sbjct: 521 DSRIAGRN 528
>gb|EMT31378.1| Zinc finger CCCH domain-containing protein 30 [Aegilops tauschii]
Length = 671
Score = 71.2 bits (173), Expect = 1e-10
Identities = 35/69 (50%), Positives = 46/69 (66%), Gaps = 2/69 (2%)
Frame = -2
Query: 471 VDIVNGSGH-QREARPKIPRPCAFFNTPKGCRHGANCSYQHDPSLPPRTQ-QPRGSKRIK 298
+D +NG+ R+ + + RPCA+FN P+GCR+GANC++ HD S R Q Q GSKRIK
Sbjct: 603 IDAMNGASMVNRDTKTRPTRPCAYFNGPRGCRNGANCTFLHDSSATSRQQEQQNGSKRIK 662
Query: 297 LDGGIVYRN 271
LD I RN
Sbjct: 663 LDSRITGRN 671
>gb|EMS45250.1| Zinc finger CCCH domain-containing protein 30 [Triticum urartu]
Length = 555
Score = 71.2 bits (173), Expect = 1e-10
Identities = 35/69 (50%), Positives = 46/69 (66%), Gaps = 2/69 (2%)
Frame = -2
Query: 471 VDIVNGSGH-QREARPKIPRPCAFFNTPKGCRHGANCSYQHDPSLPPRTQ-QPRGSKRIK 298
+D +NG+ R+ + + RPCA+FN P+GCR+GANC++ HD S R Q Q GSKRIK
Sbjct: 487 IDAMNGASMVNRDTKTRPTRPCAYFNGPRGCRNGANCTFLHDSSATSRQQEQQNGSKRIK 546
Query: 297 LDGGIVYRN 271
LD I RN
Sbjct: 547 LDSRITGRN 555
>gb|EEE61849.1| hypothetical protein OsJ_16516 [Oryza sativa Japonica Group]
Length = 473
Score = 71.2 bits (173), Expect = 1e-10
Identities = 34/73 (46%), Positives = 50/73 (68%), Gaps = 4/73 (5%)
Frame = -2
Query: 477 GNVDIVNGSGHQ--REARPKIPRPCAFFNTPKGCRHGANCSYQHDPSLPPRT--QQPRGS 310
G +D +NG+ R+ + + +PCA+FN+PKGCR+GA+C++ HD S P R Q+ +GS
Sbjct: 401 GGIDAMNGAAAMVSRDGKVRPMKPCAYFNSPKGCRNGASCTFLHDASAPTRKDHQKQKGS 460
Query: 309 KRIKLDGGIVYRN 271
KRIKLD + RN
Sbjct: 461 KRIKLDNTMGGRN 473
>gb|EEC78190.1| hypothetical protein OsI_17796 [Oryza sativa Indica Group]
Length = 473
Score = 71.2 bits (173), Expect = 1e-10
Identities = 34/73 (46%), Positives = 50/73 (68%), Gaps = 4/73 (5%)
Frame = -2
Query: 477 GNVDIVNGSGHQ--REARPKIPRPCAFFNTPKGCRHGANCSYQHDPSLPPRT--QQPRGS 310
G +D +NG+ R+ + + +PCA+FN+PKGCR+GA+C++ HD S P R Q+ +GS
Sbjct: 401 GGIDAMNGAAAMVSRDGKVRPMKPCAYFNSPKGCRNGASCTFLHDASAPTRKDHQKQKGS 460
Query: 309 KRIKLDGGIVYRN 271
KRIKLD + RN
Sbjct: 461 KRIKLDNTMGGRN 473
>sp|Q7XM16.3|C3H30_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 30;
Short=OsC3H30
Length = 469
Score = 71.2 bits (173), Expect = 1e-10
Identities = 34/73 (46%), Positives = 50/73 (68%), Gaps = 4/73 (5%)
Frame = -2
Query: 477 GNVDIVNGSGHQ--REARPKIPRPCAFFNTPKGCRHGANCSYQHDPSLPPRT--QQPRGS 310
G +D +NG+ R+ + + +PCA+FN+PKGCR+GA+C++ HD S P R Q+ +GS
Sbjct: 397 GGIDAMNGAAAMVSRDGKVRPMKPCAYFNSPKGCRNGASCTFLHDASAPTRKDHQKQKGS 456
Query: 309 KRIKLDGGIVYRN 271
KRIKLD + RN
Sbjct: 457 KRIKLDNTMGGRN 469
>emb|CAH66888.1| OSIGBa0099L20.3 [Oryza sativa Indica Group]
Length = 451
Score = 71.2 bits (173), Expect = 1e-10
Identities = 34/73 (46%), Positives = 50/73 (68%), Gaps = 4/73 (5%)
Frame = -2
Query: 477 GNVDIVNGSGHQ--REARPKIPRPCAFFNTPKGCRHGANCSYQHDPSLPPRT--QQPRGS 310
G +D +NG+ R+ + + +PCA+FN+PKGCR+GA+C++ HD S P R Q+ +GS
Sbjct: 379 GGIDAMNGAAAMVSRDGKVRPMKPCAYFNSPKGCRNGASCTFLHDASAPTRKDHQKQKGS 438
Query: 309 KRIKLDGGIVYRN 271
KRIKLD + RN
Sbjct: 439 KRIKLDNTMGGRN 451
>ref|NP_001054162.1| Os04g0663200 [Oryza sativa Japonica Group]
gi|113565733|dbj|BAF16076.1| Os04g0663200 [Oryza sativa
Japonica Group]
Length = 393
Score = 71.2 bits (173), Expect = 1e-10
Identities = 34/73 (46%), Positives = 50/73 (68%), Gaps = 4/73 (5%)
Frame = -2
Query: 477 GNVDIVNGSGHQ--REARPKIPRPCAFFNTPKGCRHGANCSYQHDPSLPPRT--QQPRGS 310
G +D +NG+ R+ + + +PCA+FN+PKGCR+GA+C++ HD S P R Q+ +GS
Sbjct: 321 GGIDAMNGAAAMVSRDGKVRPMKPCAYFNSPKGCRNGASCTFLHDASAPTRKDHQKQKGS 380
Query: 309 KRIKLDGGIVYRN 271
KRIKLD + RN
Sbjct: 381 KRIKLDNTMGGRN 393
>emb|CAE04843.2| OSJNBa0084K01.15 [Oryza sativa Japonica Group]
Length = 451
Score = 71.2 bits (173), Expect = 1e-10
Identities = 34/73 (46%), Positives = 50/73 (68%), Gaps = 4/73 (5%)
Frame = -2
Query: 477 GNVDIVNGSGHQ--REARPKIPRPCAFFNTPKGCRHGANCSYQHDPSLPPRT--QQPRGS 310
G +D +NG+ R+ + + +PCA+FN+PKGCR+GA+C++ HD S P R Q+ +GS
Sbjct: 379 GGIDAMNGAAAMVSRDGKVRPMKPCAYFNSPKGCRNGASCTFLHDASAPTRKDHQKQKGS 438
Query: 309 KRIKLDGGIVYRN 271
KRIKLD + RN
Sbjct: 439 KRIKLDNTMGGRN 451
>ref|XP_002510504.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223551205|gb|EEF52691.1| nucleic acid binding
protein, putative [Ricinus communis]
Length = 461
Score = 69.3 bits (168), Expect = 5e-10
Identities = 31/64 (48%), Positives = 45/64 (70%), Gaps = 3/64 (4%)
Frame = -2
Query: 474 NVDIVNGSGHQREARPKIPRPCAFFNTPKGCRHGANCSYQHDPSLPPRT---QQPRGSKR 304
N ++VN RE +PKI +PC +FN+ +GCRHGANC+YQHDPS R+ + + +KR
Sbjct: 395 NQELVNPKS--RELKPKIMKPCIYFNSSRGCRHGANCAYQHDPSFQQRSSAISEVQSAKR 452
Query: 303 IKLD 292
+K+D
Sbjct: 453 MKVD 456
>gb|ACN25297.1| unknown [Zea mays] gi|413919841|gb|AFW59773.1| zinc finger
C-x8-C-x5-C-x3-H type family protein [Zea mays]
Length = 458
Score = 68.2 bits (165), Expect = 1e-09
Identities = 34/66 (51%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Frame = -2
Query: 468 DIVN-GSGHQREARPKIPRPCAFFNTPKGCRHGANCSYQHDPSLPPRTQQPRGSKRIKLD 292
DIV+ G+ R+ + + RPCA+FN+ +GCR+GANC++ HD S R +QP+GSKRIKLD
Sbjct: 393 DIVSSGTMPARDTKQRPTRPCAYFNSARGCRNGANCTFLHDVS-AARKEQPKGSKRIKLD 451
Query: 291 GGIVYR 274
I R
Sbjct: 452 SRIAGR 457
>gb|AAO14624.2|AF467900_1 hypothetical protein [Prunus persica] gi|462419155|gb|EMJ23418.1|
hypothetical protein PRUPE_ppa005842mg [Prunus persica]
Length = 441
Score = 67.4 bits (163), Expect = 2e-09
Identities = 28/60 (46%), Positives = 40/60 (66%), Gaps = 4/60 (6%)
Frame = -2
Query: 459 NGSGHQREARPKIPRPCAFFNTPKGCRHGANCSYQHDPSLPPR----TQQPRGSKRIKLD 292
N R+++PKI +PC +FN+ +GCRHGANC+YQHD S PR + +KR+K+D
Sbjct: 377 NNGYKSRDSKPKIMKPCIYFNSSRGCRHGANCAYQHDASFQPRGSSSAPEVHSTKRMKMD 436
>ref|XP_004960188.1| PREDICTED: zinc finger CCCH domain-containing protein 30-like
isoform X1 [Setaria italica]
Length = 450
Score = 67.0 bits (162), Expect = 2e-09
Identities = 30/66 (45%), Positives = 44/66 (66%)
Frame = -2
Query: 471 VDIVNGSGHQREARPKIPRPCAFFNTPKGCRHGANCSYQHDPSLPPRTQQPRGSKRIKLD 292
+D+V+ + + +PCA+FN+ +GCR+GANC++ HD S R +QP+GSKRIKLD
Sbjct: 385 IDVVSNGSMPGREKQRPTKPCAYFNSARGCRNGANCTFLHDVS-AARKEQPKGSKRIKLD 443
Query: 291 GGIVYR 274
I R
Sbjct: 444 SRIAGR 449
>ref|XP_002448705.1| hypothetical protein SORBIDRAFT_06g031850 [Sorghum bicolor]
gi|241939888|gb|EES13033.1| hypothetical protein
SORBIDRAFT_06g031850 [Sorghum bicolor]
Length = 450
Score = 67.0 bits (162), Expect = 2e-09
Identities = 34/70 (48%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
Frame = -2
Query: 480 AGNVDIVN-GSGHQREARPKIPRPCAFFNTPKGCRHGANCSYQHDPSLPPRTQQPRGSKR 304
A DIV+ G+ R+ + + +PCA+FN+ +GCR+GANC++ HD S R +QP+GSKR
Sbjct: 381 ASATDIVSSGTMAARDNKQRPTKPCAYFNSARGCRNGANCTFLHDMS-AARKEQPKGSKR 439
Query: 303 IKLDGGIVYR 274
IKLD I R
Sbjct: 440 IKLDSRIAGR 449
>ref|XP_004291394.1| PREDICTED: zinc finger CCCH domain-containing protein 6-like
[Fragaria vesca subsp. vesca]
Length = 427
Score = 65.9 bits (159), Expect = 5e-09
Identities = 31/65 (47%), Positives = 42/65 (64%), Gaps = 3/65 (4%)
Frame = -2
Query: 477 GNVDIVNGSGHQREARPKIPRPCAFFNTPKGCRHGANCSYQHDPSLP---PRTQQPRGSK 307
GN + NG R+ +PKI +PC +FN+ +GCRHGANCS+QHD S R + + SK
Sbjct: 359 GNQESFNGY-KSRDPKPKIMKPCIYFNSSRGCRHGANCSFQHDASFQQQGSRVPEVQSSK 417
Query: 306 RIKLD 292
R+K D
Sbjct: 418 RMKFD 422
>ref|XP_003523552.1| PREDICTED: zinc finger CCCH domain-containing protein 6-like
[Glycine max]
Length = 430
Score = 65.5 bits (158), Expect = 7e-09
Identities = 30/66 (45%), Positives = 43/66 (65%), Gaps = 3/66 (4%)
Frame = -2
Query: 480 AGNVDIVNGSGHQREARPKIPRPCAFFNTPKGCRHGANCSYQHDPSLPPRTQQPRG---S 310
A N + + + + ++PKI +PC FFN+ +GCR+GANC+YQHD S PR G S
Sbjct: 360 ATNYETTSYNHRGKVSKPKIMKPCIFFNSSRGCRNGANCAYQHDASFQPRGNTVSGIQSS 419
Query: 309 KRIKLD 292
KR+K+D
Sbjct: 420 KRMKMD 425
>ref|XP_002277913.1| PREDICTED: zinc finger CCCH domain-containing protein 6-like [Vitis
vinifera]
Length = 457
Score = 65.5 bits (158), Expect = 7e-09
Identities = 27/53 (50%), Positives = 40/53 (75%), Gaps = 3/53 (5%)
Frame = -2
Query: 441 REARPKIPRPCAFFNTPKGCRHGANCSYQHDPSLPPRTQ---QPRGSKRIKLD 292
R+++PKI +PC +F++ +GCRHGANCSYQHD SL R + + +KR+K+D
Sbjct: 399 RDSKPKIMKPCIYFHSSRGCRHGANCSYQHDASLQQRVSSMPEVQNAKRMKMD 451
>ref|XP_004960189.1| PREDICTED: zinc finger CCCH domain-containing protein 30-like
isoform X2 [Setaria italica]
Length = 398
Score = 65.1 bits (157), Expect = 9e-09
Identities = 32/69 (46%), Positives = 44/69 (63%)
Frame = -2
Query: 480 AGNVDIVNGSGHQREARPKIPRPCAFFNTPKGCRHGANCSYQHDPSLPPRTQQPRGSKRI 301
A + VN S + + +PCA+FN+ +GCR+GANC++ HD S R +QP+GSKRI
Sbjct: 330 ASSSQAVNFSNIPGREKQRPTKPCAYFNSARGCRNGANCTFLHDVS-AARKEQPKGSKRI 388
Query: 300 KLDGGIVYR 274
KLD I R
Sbjct: 389 KLDSRIAGR 397