BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00031359
         (331 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY09212.1| Tetratricopeptide repeat (TPR)-like superfamily p...    74   2e-11
ref|XP_004493484.1| PREDICTED: pentatricopeptide repeat-containi...    74   2e-11
ref|XP_004493483.1| PREDICTED: pentatricopeptide repeat-containi...    74   2e-11
ref|XP_003625140.1| Pentatricopeptide repeat-containing protein ...    74   2e-11
ref|XP_002308939.2| pentatricopeptide repeat-containing family p...    72   6e-11
ref|XP_003557384.1| PREDICTED: pentatricopeptide repeat-containi...    70   3e-10
tpg|DAA63244.1| TPA: hypothetical protein ZEAMMB73_160132 [Zea m...    69   8e-10
ref|XP_002278330.2| PREDICTED: pentatricopeptide repeat-containi...    69   8e-10
emb|CBI29835.3| unnamed protein product [Vitis vinifera]               69   8e-10
ref|NP_001169529.1| uncharacterized protein LOC100383403 [Zea ma...    69   8e-10
dbj|BAJ99440.1| predicted protein [Hordeum vulgare subsp. vulgare]     68   1e-09
ref|XP_006492925.1| PREDICTED: pentatricopeptide repeat-containi...    68   1e-09
ref|XP_006492924.1| PREDICTED: pentatricopeptide repeat-containi...    68   1e-09
ref|XP_006421326.1| hypothetical protein CICLE_v10004305mg [Citr...    68   1e-09
ref|XP_004955810.1| PREDICTED: pentatricopeptide repeat-containi...    68   1e-09
ref|XP_002463064.1| hypothetical protein SORBIDRAFT_02g037020 [S...    67   2e-09
ref|XP_003520516.2| PREDICTED: pentatricopeptide repeat-containi...    66   4e-09
gb|EMT25370.1| hypothetical protein F775_31911 [Aegilops tauschii]     66   4e-09
dbj|BAD37933.1| hypothetical protein [Oryza sativa Japonica Group]     66   5e-09
ref|XP_006293674.1| hypothetical protein CARUB_v10022630mg [Caps...    64   2e-08

>gb|EOY09212.1| Tetratricopeptide repeat (TPR)-like superfamily protein isoform 1
           [Theobroma cacao]
          Length = 841

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 36/70 (51%), Positives = 49/70 (70%)
 Frame = -1

Query: 211 SRSPKKRLQHQYGKNGSRWDERKLVGFVDYDKGERRIAVEVAGARKDDIPARYRLRVEGS 32
           S  PK  +  +  KN + ++++K  GFVDYDKG+  ++  V+G RK DIP RYRLRVEG 
Sbjct: 22  STRPKSLVLCKKRKNDTAFEDQKS-GFVDYDKGQHEVSTRVSGLRKADIPKRYRLRVEGD 80

Query: 31  RWQKDWKLSE 2
           R+QKDW +SE
Sbjct: 81  RFQKDWTVSE 90


>ref|XP_004493484.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41720-like isoform X2 [Cicer arietinum]
          Length = 830

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 36/71 (50%), Positives = 47/71 (66%)
 Frame = -1

Query: 214 SSRSPKKRLQHQYGKNGSRWDERKLVGFVDYDKGERRIAVEVAGARKDDIPARYRLRVEG 35
           S+R PK  L  +   N   + E K  GFVDYD+G+  ++  + G RKDDIPA YRLRV G
Sbjct: 17  STRPPKSTLTRKKKTNELAFKETK-DGFVDYDRGQHEVSTRITGLRKDDIPAHYRLRVAG 75

Query: 34  SRWQKDWKLSE 2
           +R+QKDW +SE
Sbjct: 76  NRFQKDWTVSE 86


>ref|XP_004493483.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41720-like isoform X1 [Cicer arietinum]
          Length = 834

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 36/71 (50%), Positives = 47/71 (66%)
 Frame = -1

Query: 214 SSRSPKKRLQHQYGKNGSRWDERKLVGFVDYDKGERRIAVEVAGARKDDIPARYRLRVEG 35
           S+R PK  L  +   N   + E K  GFVDYD+G+  ++  + G RKDDIPA YRLRV G
Sbjct: 17  STRPPKSTLTRKKKTNELAFKETK-DGFVDYDRGQHEVSTRITGLRKDDIPAHYRLRVAG 75

Query: 34  SRWQKDWKLSE 2
           +R+QKDW +SE
Sbjct: 76  NRFQKDWTVSE 86


>ref|XP_003625140.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355500155|gb|AES81358.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 855

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 34/74 (45%), Positives = 50/74 (67%)
 Frame = -1

Query: 223 IKPSSRSPKKRLQHQYGKNGSRWDERKLVGFVDYDKGERRIAVEVAGARKDDIPARYRLR 44
           +  S+R PK     +   N   + E+K  GFVDYD+G  +++ +++G RK+DIPA YRLR
Sbjct: 15  VTESTRPPKSTTTRKKSSNEVAFKEKK-DGFVDYDRGHHQVSTKISGLRKEDIPAHYRLR 73

Query: 43  VEGSRWQKDWKLSE 2
           V G+R+QKDW +SE
Sbjct: 74  VAGNRFQKDWTVSE 87


>ref|XP_002308939.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550335476|gb|EEE92462.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 822

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 33/72 (45%), Positives = 51/72 (70%)
 Frame = -1

Query: 217 PSSRSPKKRLQHQYGKNGSRWDERKLVGFVDYDKGERRIAVEVAGARKDDIPARYRLRVE 38
           P+  + K ++  +  KN + ++E+K  GFVDYDKG   ++ +V+G RKD IP RYR+RV+
Sbjct: 15  PTPPAFKPKILCKNSKNDAAFEEKKS-GFVDYDKGIHHVSTQVSGIRKDQIPQRYRIRVQ 73

Query: 37  GSRWQKDWKLSE 2
           G R+QKDW +S+
Sbjct: 74  GDRFQKDWSVSQ 85


>ref|XP_003557384.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41720-like [Brachypodium distachyon]
          Length = 821

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 38/83 (45%), Positives = 47/83 (56%)
 Frame = -1

Query: 250 PPGPQRTIWIKPSSRSPKKRLQHQYGKNGSRWDERKLVGFVDYDKGERRIAVEVAGARKD 71
           P  P R +  +P  R P+             W ER+    VDYD+G R   VEV G   D
Sbjct: 17  PEAPPRVV--RPPRRPPRT-------PGPPPWAERRPSISVDYDRGRRTARVEVDGIGAD 67

Query: 70  DIPARYRLRVEGSRWQKDWKLSE 2
            +PAR+RLRVEGSRWQ+DWK+SE
Sbjct: 68  ALPARHRLRVEGSRWQRDWKVSE 90


>tpg|DAA63244.1| TPA: hypothetical protein ZEAMMB73_160132 [Zea mays]
           gi|414887231|tpg|DAA63245.1| TPA: hypothetical protein
           ZEAMMB73_160132 [Zea mays]
          Length = 177

 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 35/85 (41%), Positives = 44/85 (51%)
 Frame = -1

Query: 256 AKPPGPQRTIWIKPSSRSPKKRLQHQYGKNGSRWDERKLVGFVDYDKGERRIAVEVAGAR 77
           A PP P     + P       R           W ER+    VD D+G R +  EV G R
Sbjct: 4   APPPPPSLNPEVPPRIVRAPPRRPPPRAPGPPPWAERRPAVSVDLDRGRRSVRTEVDGVR 63

Query: 76  KDDIPARYRLRVEGSRWQKDWKLSE 2
              +PAR+RLRVEG+RWQ+DWK+SE
Sbjct: 64  AASLPARHRLRVEGNRWQRDWKVSE 88


>ref|XP_002278330.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41720-like [Vitis vinifera]
          Length = 848

 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 32/72 (44%), Positives = 46/72 (63%)
 Frame = -1

Query: 217 PSSRSPKKRLQHQYGKNGSRWDERKLVGFVDYDKGERRIAVEVAGARKDDIPARYRLRVE 38
           P+  + K  +  +  K+    +E+K V FVDYD G+ +++  V+G RK DIP  YRLRVE
Sbjct: 28  PTFTTHKTLISCKESKSKGALEEKKKVVFVDYDNGKHQVSTHVSGLRKADIPKHYRLRVE 87

Query: 37  GSRWQKDWKLSE 2
             R+QKDW +SE
Sbjct: 88  ADRFQKDWSVSE 99


>emb|CBI29835.3| unnamed protein product [Vitis vinifera]
          Length = 852

 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 32/72 (44%), Positives = 46/72 (63%)
 Frame = -1

Query: 217 PSSRSPKKRLQHQYGKNGSRWDERKLVGFVDYDKGERRIAVEVAGARKDDIPARYRLRVE 38
           P+  + K  +  +  K+    +E+K V FVDYD G+ +++  V+G RK DIP  YRLRVE
Sbjct: 28  PTFTTHKTLISCKESKSKGALEEKKKVVFVDYDNGKHQVSTHVSGLRKADIPKHYRLRVE 87

Query: 37  GSRWQKDWKLSE 2
             R+QKDW +SE
Sbjct: 88  ADRFQKDWSVSE 99


>ref|NP_001169529.1| uncharacterized protein LOC100383403 [Zea mays]
           gi|224029903|gb|ACN34027.1| unknown [Zea mays]
           gi|414887232|tpg|DAA63246.1| TPA: hypothetical protein
           ZEAMMB73_160132 [Zea mays]
          Length = 819

 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 35/85 (41%), Positives = 44/85 (51%)
 Frame = -1

Query: 256 AKPPGPQRTIWIKPSSRSPKKRLQHQYGKNGSRWDERKLVGFVDYDKGERRIAVEVAGAR 77
           A PP P     + P       R           W ER+    VD D+G R +  EV G R
Sbjct: 4   APPPPPSLNPEVPPRIVRAPPRRPPPRAPGPPPWAERRPAVSVDLDRGRRSVRTEVDGVR 63

Query: 76  KDDIPARYRLRVEGSRWQKDWKLSE 2
              +PAR+RLRVEG+RWQ+DWK+SE
Sbjct: 64  AASLPARHRLRVEGNRWQRDWKVSE 88


>dbj|BAJ99440.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 819

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 30/52 (57%), Positives = 39/52 (75%)
 Frame = -1

Query: 157 WDERKLVGFVDYDKGERRIAVEVAGARKDDIPARYRLRVEGSRWQKDWKLSE 2
           W +R+    VDYD+G R + VEV G   D +PAR+RLRVEGSRWQ+DWK+S+
Sbjct: 37  WAKRRPSVSVDYDRGRRTVRVEVDGLGGDALPARHRLRVEGSRWQRDWKVSQ 88


>ref|XP_006492925.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41720-like isoform X2 [Citrus sinensis]
          Length = 846

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 28/45 (62%), Positives = 37/45 (82%)
 Frame = -1

Query: 136 GFVDYDKGERRIAVEVAGARKDDIPARYRLRVEGSRWQKDWKLSE 2
           GFVDYDKG+  ++ +V+G RK DIP R+RL VEG+R+QKDW +SE
Sbjct: 53  GFVDYDKGQHEVSTQVSGLRKSDIPRRHRLAVEGNRFQKDWSVSE 97


>ref|XP_006492924.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41720-like isoform X1 [Citrus sinensis]
          Length = 859

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 28/45 (62%), Positives = 37/45 (82%)
 Frame = -1

Query: 136 GFVDYDKGERRIAVEVAGARKDDIPARYRLRVEGSRWQKDWKLSE 2
           GFVDYDKG+  ++ +V+G RK DIP R+RL VEG+R+QKDW +SE
Sbjct: 53  GFVDYDKGQHEVSTQVSGLRKSDIPRRHRLAVEGNRFQKDWSVSE 97


>ref|XP_006421326.1| hypothetical protein CICLE_v10004305mg [Citrus clementina]
           gi|557523199|gb|ESR34566.1| hypothetical protein
           CICLE_v10004305mg [Citrus clementina]
          Length = 846

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 28/45 (62%), Positives = 37/45 (82%)
 Frame = -1

Query: 136 GFVDYDKGERRIAVEVAGARKDDIPARYRLRVEGSRWQKDWKLSE 2
           GFVDYDKG+  ++ +V+G RK DIP R+RL VEG+R+QKDW +SE
Sbjct: 53  GFVDYDKGQHEVSTQVSGLRKSDIPRRHRLAVEGNRFQKDWSVSE 97


>ref|XP_004955810.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41720-like [Setaria italica]
          Length = 821

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 37/85 (43%), Positives = 47/85 (55%)
 Frame = -1

Query: 256 AKPPGPQRTIWIKPSSRSPKKRLQHQYGKNGSRWDERKLVGFVDYDKGERRIAVEVAGAR 77
           A PP P          R+P +R   +       W ER+    VD D+G RR  VEV G  
Sbjct: 7   APPPPPSPDAGSPRVVRAPPRRPPPR-APGPPPWAERRPAVSVDLDRGRRRARVEVDGVG 65

Query: 76  KDDIPARYRLRVEGSRWQKDWKLSE 2
              +PAR+RLRVEG+RWQ+DWK+SE
Sbjct: 66  AASLPARHRLRVEGTRWQRDWKVSE 90


>ref|XP_002463064.1| hypothetical protein SORBIDRAFT_02g037020 [Sorghum bicolor]
           gi|241926441|gb|EER99585.1| hypothetical protein
           SORBIDRAFT_02g037020 [Sorghum bicolor]
          Length = 558

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 34/83 (40%), Positives = 44/83 (53%)
 Frame = -1

Query: 250 PPGPQRTIWIKPSSRSPKKRLQHQYGKNGSRWDERKLVGFVDYDKGERRIAVEVAGARKD 71
           P  P R +   P    P+             W ER+    VD D+G R +  EV G R  
Sbjct: 13  PDAPPRVVRAPPRRPPPR-------APGPPPWAERRPAVSVDLDRGRRWVRTEVDGVRAA 65

Query: 70  DIPARYRLRVEGSRWQKDWKLSE 2
            +PAR+RLRVEG+RWQ+DWK+SE
Sbjct: 66  SLPARHRLRVEGNRWQRDWKVSE 88


>ref|XP_003520516.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41720-like [Glycine max]
          Length = 837

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 27/45 (60%), Positives = 37/45 (82%)
 Frame = -1

Query: 136 GFVDYDKGERRIAVEVAGARKDDIPARYRLRVEGSRWQKDWKLSE 2
           GFVDYD+G+  ++ +++G RKDDI ARYRLRV G+R+Q DW +SE
Sbjct: 42  GFVDYDRGQHEVSTKISGLRKDDIAARYRLRVAGNRFQMDWTVSE 86


>gb|EMT25370.1| hypothetical protein F775_31911 [Aegilops tauschii]
          Length = 684

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 38/85 (44%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
 Frame = -1

Query: 250 PPGPQRTIWIKP--SSRSPKKRLQHQYGKNGSRWDERKLVGFVDYDKGERRIAVEVAGAR 77
           P  P R +   P  S RSP   L          W +R+    VDYD+G R + VEV G  
Sbjct: 14  PEAPPRVVRPPPRRSPRSPGPPL----------WAQRRRPVSVDYDRGRRTVRVEVDGVG 63

Query: 76  KDDIPARYRLRVEGSRWQKDWKLSE 2
            D +PAR+RLRVEGSRWQ+D K+S+
Sbjct: 64  ADALPARHRLRVEGSRWQRDCKVSQ 88


>dbj|BAD37933.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 224

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 34/72 (47%), Positives = 41/72 (56%)
 Frame = -1

Query: 217 PSSRSPKKRLQHQYGKNGSRWDERKLVGFVDYDKGERRIAVEVAGARKDDIPARYRLRVE 38
           P +R P   L    G     W ER+    VDYD+G+R    EV G      PAR+RLRVE
Sbjct: 104 PDARGPCA-LTTAAGATPPEWAERRPAVSVDYDRGQREARAEVEGVGAVAFPARHRLRVE 162

Query: 37  GSRWQKDWKLSE 2
           GSRWQ+DWK+ E
Sbjct: 163 GSRWQRDWKVLE 174


>ref|XP_006293674.1| hypothetical protein CARUB_v10022630mg [Capsella rubella]
           gi|482562382|gb|EOA26572.1| hypothetical protein
           CARUB_v10022630mg [Capsella rubella]
          Length = 841

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 31/57 (54%), Positives = 39/57 (68%)
 Frame = -1

Query: 172 KNGSRWDERKLVGFVDYDKGERRIAVEVAGARKDDIPARYRLRVEGSRWQKDWKLSE 2
           K    + E+K V  V+YD+GE  ++V V G RK DIP RYRLRVE  R+QKDW +SE
Sbjct: 51  KASEAFQEKKSVS-VNYDRGEHEVSVRVGGLRKADIPRRYRLRVENDRFQKDWSVSE 106