BLASTX nr result
ID: Zingiber25_contig00031340
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00031340
(393 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P46819.2|RPOC1_SINAL RecName: Full=DNA-directed RNA polymeras... 225 4e-57
gb|AAZ03985.1| RNA polymerase beta' chain [Acorus americanus] 224 7e-57
gb|AAZ03990.1| RNA polymerase beta' chain [Yucca schidigera] 224 9e-57
ref|YP_008592479.1| RNA polymerase beta' subunit (chloroplast) [... 223 2e-56
gb|AAV74362.1| RpoC1 [Acorus gramineus] 223 2e-56
ref|YP_319756.1| RNA polymerase beta' subunit [Acorus calamus] g... 223 2e-56
ref|YP_004769938.1| RNA polymerase beta (chloroplast) [Wolffia a... 223 2e-56
ref|YP_004769803.1| RNA polymerase beta (chloroplast) [Wolffiell... 223 2e-56
gb|ABW40754.1| RNA polymerase beta subunit [Papaver somniferum] 223 2e-56
gb|ABW40753.1| RNA polymerase beta subunit [Papaver somniferum] 223 2e-56
ref|YP_001595499.1| RNA polymerase beta' subunit-1 [Lemna minor]... 223 2e-56
sp|Q5QA71.2|RPOC1_ACOGR RecName: Full=DNA-directed RNA polymeras... 223 2e-56
gb|AHH30432.1| RNA polymerase beta (chloroplast) [Bartsia inaequ... 222 3e-56
ref|YP_008815021.1| RNA polymerase beta (chloroplast) [Metapanax... 222 3e-56
gb|ABB90034.1| RNA polymerase beta I chain [Solanum tuberosum] 222 3e-56
gb|AAZ03988.1| RNA polymerase beta' chain [Ranunculus macranthus] 222 3e-56
gb|AAZ03989.1| RNA polymerase beta' chain [Typha latifolia] 222 3e-56
gb|AEZ01418.1| RNA polymerase beta (chloroplast) [Japonolirion o... 222 3e-56
ref|YP_004935657.1| rpoC1 gene product (chloroplast) [Sesamum in... 222 3e-56
ref|YP_003433966.1| RNA polymerase beta [Typha latifolia] gi|281... 222 3e-56
>sp|P46819.2|RPOC1_SINAL RecName: Full=DNA-directed RNA polymerase subunit beta'; AltName:
Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit beta'; Short=RNA polymerase subunit beta'
gi|5457428|emb|CAB48413.1| RNA polymerase A beta prime
subunit [Sinapis alba]
Length = 688
Score = 225 bits (574), Expect = 4e-57
Identities = 104/113 (92%), Positives = 106/113 (93%)
Frame = -3
Query: 391 TFHYKTNKPEKDGLFCERIFGPINSGICACGNYRVIGAEKEDPKFCEQCGVEFVDSRIRR 212
TFHYKTNKPEKDGLFCERIFGPI SGICACGNYRVIG EK DPKFCEQCGVEFVDSRIRR
Sbjct: 42 TFHYKTNKPEKDGLFCERIFGPIKSGICACGNYRVIGDEKGDPKFCEQCGVEFVDSRIRR 101
Query: 211 YQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKELEGLVYCDV*FDQNLRFT 53
YQMGYIKL CPVTHVWYLKRLPSYIANLLDKPLKELEGLVYCDV FD+N F+
Sbjct: 102 YQMGYIKLTCPVTHVWYLKRLPSYIANLLDKPLKELEGLVYCDVCFDRNPNFS 154
>gb|AAZ03985.1| RNA polymerase beta' chain [Acorus americanus]
Length = 696
Score = 224 bits (572), Expect = 7e-57
Identities = 104/108 (96%), Positives = 106/108 (98%)
Frame = -3
Query: 391 TFHYKTNKPEKDGLFCERIFGPINSGICACGNYRVIGAEKEDPKFCEQCGVEFVDSRIRR 212
TFHYKTNKPEKDGLFCERIFGPI SGICACGNYRVIGAEKEDPKFCEQCGVEF+DSRIRR
Sbjct: 49 TFHYKTNKPEKDGLFCERIFGPIKSGICACGNYRVIGAEKEDPKFCEQCGVEFIDSRIRR 108
Query: 211 YQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKELEGLVYCDV*FDQ 68
YQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKELEGLVYCDV FD+
Sbjct: 109 YQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKELEGLVYCDV-FDR 155
>gb|AAZ03990.1| RNA polymerase beta' chain [Yucca schidigera]
Length = 693
Score = 224 bits (571), Expect = 9e-57
Identities = 105/113 (92%), Positives = 108/113 (95%)
Frame = -3
Query: 391 TFHYKTNKPEKDGLFCERIFGPINSGICACGNYRVIGAEKEDPKFCEQCGVEFVDSRIRR 212
TFHYKTNKPEKDGLFCERI GPI SGICACGNYRVIGAEKEDPKFCE+CGVEFVDSRIRR
Sbjct: 49 TFHYKTNKPEKDGLFCERISGPIKSGICACGNYRVIGAEKEDPKFCEECGVEFVDSRIRR 108
Query: 211 YQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKELEGLVYCDV*FDQNLRFT 53
YQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKELEGLVYCDV FD+ L F+
Sbjct: 109 YQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKELEGLVYCDV-FDRYLNFS 160
>ref|YP_008592479.1| RNA polymerase beta' subunit (chloroplast) [Andrographis
paniculata] gi|532164827|gb|AGT79837.1| RNA polymerase
beta' subunit (chloroplast) [Andrographis paniculata]
Length = 687
Score = 223 bits (569), Expect = 2e-56
Identities = 101/104 (97%), Positives = 103/104 (99%)
Frame = -3
Query: 391 TFHYKTNKPEKDGLFCERIFGPINSGICACGNYRVIGAEKEDPKFCEQCGVEFVDSRIRR 212
TFHYKTNKPEKDGLFCERIFGPI SGICACGNYRVIGAEKEDPKFCEQCGVEF+DSRIRR
Sbjct: 42 TFHYKTNKPEKDGLFCERIFGPIKSGICACGNYRVIGAEKEDPKFCEQCGVEFIDSRIRR 101
Query: 211 YQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKELEGLVYCDV 80
YQMGYIKLACPVTHVWYLKRLPSYIANLLDKP+KELEGLVYCDV
Sbjct: 102 YQMGYIKLACPVTHVWYLKRLPSYIANLLDKPIKELEGLVYCDV 145
>gb|AAV74362.1| RpoC1 [Acorus gramineus]
Length = 689
Score = 223 bits (568), Expect = 2e-56
Identities = 102/106 (96%), Positives = 103/106 (97%)
Frame = -3
Query: 391 TFHYKTNKPEKDGLFCERIFGPINSGICACGNYRVIGAEKEDPKFCEQCGVEFVDSRIRR 212
TFHYKTNKPEKDGLFCERIFGPI SGICACGNYRVIGAEKEDPKFCEQCGVEF+DSRIRR
Sbjct: 49 TFHYKTNKPEKDGLFCERIFGPIKSGICACGNYRVIGAEKEDPKFCEQCGVEFIDSRIRR 108
Query: 211 YQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKELEGLVYCDV*F 74
YQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKELEGLVYCD F
Sbjct: 109 YQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKELEGLVYCDFSF 154
>ref|YP_319756.1| RNA polymerase beta' subunit [Acorus calamus]
gi|161622301|ref|YP_001586173.1| RNA polymerase beta'
subunit [Acorus americanus]
gi|90110994|sp|Q3V543.1|RPOC1_ACOCL RecName:
Full=DNA-directed RNA polymerase subunit gamma;
Short=RNAP subunit gamma; AltName: Full=RNA polymerase
subunit gamma; AltName: Full=Transcriptase subunit gamma
gi|212288453|sp|A9LYH6.1|RPOC1_ACOAM RecName:
Full=DNA-directed RNA polymerase subunit beta'; AltName:
Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit beta'; Short=RNA polymerase subunit beta'
gi|74381700|emb|CAI53785.1| RNA polymerase beta'
subunit-1 [Acorus calamus] gi|160369844|gb|ABX38735.1|
RNA polymerase beta' subunit [Acorus americanus]
Length = 682
Score = 223 bits (568), Expect = 2e-56
Identities = 102/106 (96%), Positives = 103/106 (97%)
Frame = -3
Query: 391 TFHYKTNKPEKDGLFCERIFGPINSGICACGNYRVIGAEKEDPKFCEQCGVEFVDSRIRR 212
TFHYKTNKPEKDGLFCERIFGPI SGICACGNYRVIGAEKEDPKFCEQCGVEF+DSRIRR
Sbjct: 42 TFHYKTNKPEKDGLFCERIFGPIKSGICACGNYRVIGAEKEDPKFCEQCGVEFIDSRIRR 101
Query: 211 YQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKELEGLVYCDV*F 74
YQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKELEGLVYCD F
Sbjct: 102 YQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKELEGLVYCDFSF 147
>ref|YP_004769938.1| RNA polymerase beta (chloroplast) [Wolffia australiana]
gi|341834230|gb|AEK94499.1| RNA polymerase beta [Wolffia
australiana]
Length = 690
Score = 223 bits (568), Expect = 2e-56
Identities = 102/106 (96%), Positives = 103/106 (97%)
Frame = -3
Query: 391 TFHYKTNKPEKDGLFCERIFGPINSGICACGNYRVIGAEKEDPKFCEQCGVEFVDSRIRR 212
TFHYKTNKPEKDGLFCERIFGPI SGICACGNYRVIGAEKEDPKFCEQCGVEFVDSR+RR
Sbjct: 49 TFHYKTNKPEKDGLFCERIFGPIKSGICACGNYRVIGAEKEDPKFCEQCGVEFVDSRVRR 108
Query: 211 YQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKELEGLVYCDV*F 74
YQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKELEGLVYCD F
Sbjct: 109 YQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKELEGLVYCDFSF 154
>ref|YP_004769803.1| RNA polymerase beta (chloroplast) [Wolffiella lingulata]
gi|341834146|gb|AEK94416.1| RNA polymerase beta
[Wolffiella lingulata]
Length = 690
Score = 223 bits (568), Expect = 2e-56
Identities = 102/106 (96%), Positives = 103/106 (97%)
Frame = -3
Query: 391 TFHYKTNKPEKDGLFCERIFGPINSGICACGNYRVIGAEKEDPKFCEQCGVEFVDSRIRR 212
TFHYKTNKPEKDGLFCERIFGPI SGICACGNYRVIGAEKEDPKFCEQCGVEFVDSR+RR
Sbjct: 49 TFHYKTNKPEKDGLFCERIFGPIKSGICACGNYRVIGAEKEDPKFCEQCGVEFVDSRVRR 108
Query: 211 YQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKELEGLVYCDV*F 74
YQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKELEGLVYCD F
Sbjct: 109 YQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKELEGLVYCDFSF 154
>gb|ABW40754.1| RNA polymerase beta subunit [Papaver somniferum]
Length = 682
Score = 223 bits (568), Expect = 2e-56
Identities = 103/106 (97%), Positives = 103/106 (97%)
Frame = -3
Query: 391 TFHYKTNKPEKDGLFCERIFGPINSGICACGNYRVIGAEKEDPKFCEQCGVEFVDSRIRR 212
TFHYKTNKPEKDGLFCERIFGPI SGICACGNYRVIG EKEDPKFCEQCGVEFVDSRIRR
Sbjct: 42 TFHYKTNKPEKDGLFCERIFGPIKSGICACGNYRVIGDEKEDPKFCEQCGVEFVDSRIRR 101
Query: 211 YQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKELEGLVYCDV*F 74
YQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKELEGLVYCDV F
Sbjct: 102 YQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKELEGLVYCDVSF 147
>gb|ABW40753.1| RNA polymerase beta subunit [Papaver somniferum]
Length = 682
Score = 223 bits (568), Expect = 2e-56
Identities = 103/106 (97%), Positives = 103/106 (97%)
Frame = -3
Query: 391 TFHYKTNKPEKDGLFCERIFGPINSGICACGNYRVIGAEKEDPKFCEQCGVEFVDSRIRR 212
TFHYKTNKPEKDGLFCERIFGPI SGICACGNYRVIG EKEDPKFCEQCGVEFVDSRIRR
Sbjct: 42 TFHYKTNKPEKDGLFCERIFGPIKSGICACGNYRVIGDEKEDPKFCEQCGVEFVDSRIRR 101
Query: 211 YQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKELEGLVYCDV*F 74
YQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKELEGLVYCDV F
Sbjct: 102 YQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKELEGLVYCDVSF 147
>ref|YP_001595499.1| RNA polymerase beta' subunit-1 [Lemna minor]
gi|212288293|sp|A9L987.1|RPOC1_LEMMI RecName:
Full=DNA-directed RNA polymerase subunit beta'; AltName:
Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit beta'; Short=RNA polymerase subunit beta'
gi|88696761|gb|ABD48486.1| RNA polymerase beta'
subunit-1 [Lemna minor]
Length = 690
Score = 223 bits (568), Expect = 2e-56
Identities = 102/106 (96%), Positives = 103/106 (97%)
Frame = -3
Query: 391 TFHYKTNKPEKDGLFCERIFGPINSGICACGNYRVIGAEKEDPKFCEQCGVEFVDSRIRR 212
TFHYKTNKPEKDGLFCERIFGPI SGICACGNYRVIGAEKEDPKFCEQCGVEFVDSR+RR
Sbjct: 49 TFHYKTNKPEKDGLFCERIFGPIKSGICACGNYRVIGAEKEDPKFCEQCGVEFVDSRVRR 108
Query: 211 YQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKELEGLVYCDV*F 74
YQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKELEGLVYCD F
Sbjct: 109 YQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKELEGLVYCDFSF 154
>sp|Q5QA71.2|RPOC1_ACOGR RecName: Full=DNA-directed RNA polymerase subunit beta'; AltName:
Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit beta'; Short=RNA polymerase subunit beta'
Length = 682
Score = 223 bits (568), Expect = 2e-56
Identities = 102/106 (96%), Positives = 103/106 (97%)
Frame = -3
Query: 391 TFHYKTNKPEKDGLFCERIFGPINSGICACGNYRVIGAEKEDPKFCEQCGVEFVDSRIRR 212
TFHYKTNKPEKDGLFCERIFGPI SGICACGNYRVIGAEKEDPKFCEQCGVEF+DSRIRR
Sbjct: 42 TFHYKTNKPEKDGLFCERIFGPIKSGICACGNYRVIGAEKEDPKFCEQCGVEFIDSRIRR 101
Query: 211 YQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKELEGLVYCDV*F 74
YQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKELEGLVYCD F
Sbjct: 102 YQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKELEGLVYCDFSF 147
>gb|AHH30432.1| RNA polymerase beta (chloroplast) [Bartsia inaequalis]
Length = 679
Score = 222 bits (566), Expect = 3e-56
Identities = 102/104 (98%), Positives = 102/104 (98%)
Frame = -3
Query: 391 TFHYKTNKPEKDGLFCERIFGPINSGICACGNYRVIGAEKEDPKFCEQCGVEFVDSRIRR 212
TFHYKTNKPEKDGLFCERIFGPI SGICACGNYRVIG EKEDPKFCEQCGVEFVDSRIRR
Sbjct: 42 TFHYKTNKPEKDGLFCERIFGPIKSGICACGNYRVIGDEKEDPKFCEQCGVEFVDSRIRR 101
Query: 211 YQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKELEGLVYCDV 80
YQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKELEGLVYCDV
Sbjct: 102 YQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKELEGLVYCDV 145
>ref|YP_008815021.1| RNA polymerase beta (chloroplast) [Metapanax delavayi]
gi|563940270|ref|YP_008814847.1| RNA polymerase beta
(chloroplast) [Aralia undulata]
gi|563940376|ref|YP_008815195.1| RNA polymerase beta
(chloroplast) [Kalopanax septemlobus]
gi|458599081|gb|AGG38947.1| RNA polymerase beta
(chloroplast) [Aralia undulata]
gi|458599362|gb|AGG39121.1| RNA polymerase beta
(chloroplast) [Metapanax delavayi]
gi|458599603|gb|AGG39295.1| RNA polymerase beta
(chloroplast) [Kalopanax septemlobus]
Length = 145
Score = 222 bits (566), Expect = 3e-56
Identities = 102/104 (98%), Positives = 102/104 (98%)
Frame = -3
Query: 391 TFHYKTNKPEKDGLFCERIFGPINSGICACGNYRVIGAEKEDPKFCEQCGVEFVDSRIRR 212
TFHYKTNKPEKDGLFCERIFGPI SGICACGNYRVIG EKEDPKFCEQCGVEFVDSRIRR
Sbjct: 42 TFHYKTNKPEKDGLFCERIFGPIKSGICACGNYRVIGNEKEDPKFCEQCGVEFVDSRIRR 101
Query: 211 YQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKELEGLVYCDV 80
YQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKELEGLVYCDV
Sbjct: 102 YQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKELEGLVYCDV 145
>gb|ABB90034.1| RNA polymerase beta I chain [Solanum tuberosum]
Length = 694
Score = 222 bits (566), Expect = 3e-56
Identities = 103/112 (91%), Positives = 104/112 (92%)
Frame = -3
Query: 391 TFHYKTNKPEKDGLFCERIFGPINSGICACGNYRVIGAEKEDPKFCEQCGVEFVDSRIRR 212
TFHYKTNKPEKDGLFCERIFGPI SGICACGNYRVIG EKEDPKFCEQCGVEFVDSRIRR
Sbjct: 49 TFHYKTNKPEKDGLFCERIFGPIKSGICACGNYRVIGDEKEDPKFCEQCGVEFVDSRIRR 108
Query: 211 YQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKELEGLVYCDV*FDQNLRF 56
YQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKELEGLVYCD+ N F
Sbjct: 109 YQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKELEGLVYCDIESYPNFSF 160
>gb|AAZ03988.1| RNA polymerase beta' chain [Ranunculus macranthus]
Length = 688
Score = 222 bits (566), Expect = 3e-56
Identities = 103/108 (95%), Positives = 105/108 (97%)
Frame = -3
Query: 391 TFHYKTNKPEKDGLFCERIFGPINSGICACGNYRVIGAEKEDPKFCEQCGVEFVDSRIRR 212
TFHYKTNKPEKDGLFCERIFGPI SGICACGNYRVIG EKEDPKFCEQCGVEFVDSR+RR
Sbjct: 42 TFHYKTNKPEKDGLFCERIFGPIKSGICACGNYRVIGNEKEDPKFCEQCGVEFVDSRVRR 101
Query: 211 YQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKELEGLVYCDV*FDQ 68
YQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKELEGLVYCDV FD+
Sbjct: 102 YQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKELEGLVYCDV-FDR 148
>gb|AAZ03989.1| RNA polymerase beta' chain [Typha latifolia]
Length = 684
Score = 222 bits (566), Expect = 3e-56
Identities = 103/107 (96%), Positives = 103/107 (96%)
Frame = -3
Query: 391 TFHYKTNKPEKDGLFCERIFGPINSGICACGNYRVIGAEKEDPKFCEQCGVEFVDSRIRR 212
TFHYKTNKPEKDGLFCERI GPI SGICACGNYRVIGAEKEDPKFCEQCGVEFVDSRIRR
Sbjct: 42 TFHYKTNKPEKDGLFCERISGPIKSGICACGNYRVIGAEKEDPKFCEQCGVEFVDSRIRR 101
Query: 211 YQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKELEGLVYCDV*FD 71
YQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKELEGLVYCDV D
Sbjct: 102 YQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKELEGLVYCDVYLD 148
>gb|AEZ01418.1| RNA polymerase beta (chloroplast) [Japonolirion osense]
Length = 686
Score = 222 bits (566), Expect = 3e-56
Identities = 103/107 (96%), Positives = 103/107 (96%)
Frame = -3
Query: 391 TFHYKTNKPEKDGLFCERIFGPINSGICACGNYRVIGAEKEDPKFCEQCGVEFVDSRIRR 212
TFHYKTNKPEKDGLFCERI GPI SGICACGNYRVIGAEKEDPKFCEQCGVEFVDSRIRR
Sbjct: 42 TFHYKTNKPEKDGLFCERISGPIKSGICACGNYRVIGAEKEDPKFCEQCGVEFVDSRIRR 101
Query: 211 YQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKELEGLVYCDV*FD 71
YQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKELEGLVYCDV D
Sbjct: 102 YQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKELEGLVYCDVYLD 148
>ref|YP_004935657.1| rpoC1 gene product (chloroplast) [Sesamum indicum]
gi|347448286|gb|AEO92697.1| RNA polymerase beta' subunit
(chloroplast) [Sesamum indicum]
Length = 691
Score = 222 bits (566), Expect = 3e-56
Identities = 102/104 (98%), Positives = 102/104 (98%)
Frame = -3
Query: 391 TFHYKTNKPEKDGLFCERIFGPINSGICACGNYRVIGAEKEDPKFCEQCGVEFVDSRIRR 212
TFHYKTNKPEKDGLFCERIFGPI SGICACGNYRVIG EKEDPKFCEQCGVEFVDSRIRR
Sbjct: 49 TFHYKTNKPEKDGLFCERIFGPIKSGICACGNYRVIGDEKEDPKFCEQCGVEFVDSRIRR 108
Query: 211 YQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKELEGLVYCDV 80
YQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKELEGLVYCDV
Sbjct: 109 YQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKELEGLVYCDV 152
>ref|YP_003433966.1| RNA polymerase beta [Typha latifolia] gi|281371763|gb|ADA63690.1|
RNA polymerase beta [Typha latifolia]
Length = 686
Score = 222 bits (566), Expect = 3e-56
Identities = 103/107 (96%), Positives = 103/107 (96%)
Frame = -3
Query: 391 TFHYKTNKPEKDGLFCERIFGPINSGICACGNYRVIGAEKEDPKFCEQCGVEFVDSRIRR 212
TFHYKTNKPEKDGLFCERI GPI SGICACGNYRVIGAEKEDPKFCEQCGVEFVDSRIRR
Sbjct: 42 TFHYKTNKPEKDGLFCERISGPIKSGICACGNYRVIGAEKEDPKFCEQCGVEFVDSRIRR 101
Query: 211 YQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKELEGLVYCDV*FD 71
YQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKELEGLVYCDV D
Sbjct: 102 YQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKELEGLVYCDVYLD 148