BLASTX nr result
ID: Zingiber25_contig00031217
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00031217
(362 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI33530.3| unnamed protein product [Vitis vinifera] 103 2e-20
ref|XP_006656739.1| PREDICTED: pentatricopeptide repeat-containi... 86 5e-15
gb|EOY08235.1| Pentatricopeptide repeat superfamily protein [The... 76 4e-12
ref|XP_006353793.1| PREDICTED: pentatricopeptide repeat-containi... 75 1e-11
ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containi... 74 2e-11
ref|XP_002525227.1| pentatricopeptide repeat-containing protein,... 74 2e-11
gb|EXB64625.1| hypothetical protein L484_017957 [Morus notabilis] 74 2e-11
ref|XP_006660454.1| PREDICTED: pentatricopeptide repeat-containi... 74 3e-11
ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group] g... 74 3e-11
ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group] g... 74 3e-11
gb|EEE69272.1| hypothetical protein OsJ_28537 [Oryza sativa Japo... 74 3e-11
gb|EAZ11837.1| hypothetical protein OsJ_01713 [Oryza sativa Japo... 74 3e-11
gb|EOY32495.1| Tetratricopeptide repeat-like superfamily protein... 73 3e-11
ref|XP_004487730.1| PREDICTED: pentatricopeptide repeat-containi... 73 4e-11
ref|XP_004298001.1| PREDICTED: pentatricopeptide repeat-containi... 73 4e-11
gb|AFW62799.1| putative pentatricopeptide repeat family protein ... 73 4e-11
ref|XP_002509440.1| pentatricopeptide repeat-containing protein,... 73 4e-11
ref|XP_006854330.1| hypothetical protein AMTR_s00039p00130050 [A... 72 6e-11
ref|XP_006849938.1| hypothetical protein AMTR_s00022p00127120 [A... 72 6e-11
ref|XP_004304908.1| PREDICTED: pentatricopeptide repeat-containi... 72 6e-11
>emb|CBI33530.3| unnamed protein product [Vitis vinifera]
Length = 614
Score = 103 bits (257), Expect = 2e-20
Identities = 51/125 (40%), Positives = 82/125 (65%), Gaps = 5/125 (4%)
Frame = +3
Query: 3 LVTSYARVDRDSGETLRLYGRMLREKLQPDHITLTALLDVSTDLVEQ-----IHSHSVKL 167
++++ R + D+ + + LY +M +E ++P+HIT L+ L+ H+H+V+
Sbjct: 131 MISASVRNNYDALDLVGLYSKMKKEDVKPNHITFAGLIGACDGLIALRLRGIFHAHTVRC 190
Query: 168 RLNSNPFVGSAMVNQYERYRGLEDALQVFDEIEDVDLVSWNIAIDVCARRGSKKHAAEIF 347
L+SN FVGS++V+ Y + LEDA++ F+EI ++DLVSWNI ID CAR SK+HA +F
Sbjct: 191 GLSSNEFVGSSLVDGYAKQMKLEDAIKAFNEIMELDLVSWNIMIDGCARNNSKEHAVRMF 250
Query: 348 SRMQK 362
S+M K
Sbjct: 251 SQMLK 255
>ref|XP_006656739.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Oryza brachyantha]
Length = 571
Score = 85.9 bits (211), Expect = 5e-15
Identities = 56/132 (42%), Positives = 72/132 (54%), Gaps = 15/132 (11%)
Frame = +3
Query: 9 TSYARVDRDSGETLRL--YGRMLREK----LQPDHITLTALLDVSTD---------LVEQ 143
T ARV R + E R Y RMLRE +PD TL+ALL + V Q
Sbjct: 81 TLIARVCRSAPEGARADSYSRMLREDGCGGARPDGRTLSALLALPLSPGGDAAGRGFVRQ 140
Query: 144 IHSHSVKLRLNSNPFVGSAMVNQYERYRGLEDALQVFDEIEDVDLVSWNIAIDVCARRGS 323
+HSH+V+L L S+ FVG+A+V Y R R VF EI + D+V WN+ ID C + GS
Sbjct: 141 VHSHAVRLGLCSSAFVGTALVRAYGRCRDTGAIAGVFKEIAEPDVVCWNVVIDACTQTGS 200
Query: 324 KKHAAEIFSRMQ 359
AAE+ SRM+
Sbjct: 201 VSRAAEVMSRMR 212
>gb|EOY08235.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
Length = 693
Score = 76.3 bits (186), Expect = 4e-12
Identities = 40/124 (32%), Positives = 71/124 (57%), Gaps = 5/124 (4%)
Frame = +3
Query: 3 LVTSYARVDRDSGETLRLYGRMLREKLQPDHITLTALL-----DVSTDLVEQIHSHSVKL 167
L+ Y +DR + L ++ + R ++ + T ++L+ S + Q+H+ +K
Sbjct: 292 LIDGYVEMDRVE-DALSVFVELQRRGIESNEFTFSSLIKACASQASLEQGAQLHAQVIKF 350
Query: 168 RLNSNPFVGSAMVNQYERYRGLEDALQVFDEIEDVDLVSWNIAIDVCARRGSKKHAAEIF 347
+ NPFV S +V+ Y + L+D++QVFDEIE+ + ++WN + V A+ G K A EIF
Sbjct: 351 NFDGNPFVSSGLVDMYGKCGLLDDSIQVFDEIENANEIAWNSMLGVFAQHGLGKDAIEIF 410
Query: 348 SRMQ 359
+RM+
Sbjct: 411 NRMK 414
>ref|XP_006353793.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31070,
mitochondrial-like [Solanum tuberosum]
Length = 599
Score = 74.7 bits (182), Expect = 1e-11
Identities = 39/125 (31%), Positives = 70/125 (56%), Gaps = 5/125 (4%)
Frame = +3
Query: 3 LVTSYARVDRDSGETLRLYGRMLREKLQPDHITLTALLDVSTDLVEQ-----IHSHSVKL 167
L+TSY R E ++L+ ML +QP+ +TL AL+ ST+L+ +H ++
Sbjct: 322 LITSYTRNKSSCEEAIKLFNEMLLSGIQPNDVTLLALISASTNLLSVCHGRGMHGYAFTS 381
Query: 168 RLNSNPFVGSAMVNQYERYRGLEDALQVFDEIEDVDLVSWNIAIDVCARRGSKKHAAEIF 347
L+S+ F+G++++N Y + L+D+ QVF E+ + SW+ I+ G A E+F
Sbjct: 382 GLSSHLFIGNSLINMYSKCGFLKDSAQVFQEMSIRNSASWSALINAYGTHGFGNKALELF 441
Query: 348 SRMQK 362
+ M++
Sbjct: 442 NEMKE 446
>ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Glycine max]
Length = 647
Score = 74.3 bits (181), Expect = 2e-11
Identities = 47/125 (37%), Positives = 73/125 (58%), Gaps = 5/125 (4%)
Frame = +3
Query: 3 LVTSYARVDRDSGETLRLYGRMLREKLQPDHITLTALLD-----VSTDLVEQIHSHSVKL 167
++T YA+ DR S + L L+ RML + +P+ TL++L+ S + QIH+ K
Sbjct: 146 MITGYAQNDRAS-DALLLFPRMLSDGAEPNEFTLSSLVKCCGYMASYNCGRQIHACCWKY 204
Query: 168 RLNSNPFVGSAMVNQYERYRGLEDALQVFDEIEDVDLVSWNIAIDVCARRGSKKHAAEIF 347
+SN FVGS++V+ Y R L +A+ VFD++ + VSWN I AR+G + A +F
Sbjct: 205 GCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNALIAGYARKGEGEEALALF 264
Query: 348 SRMQK 362
RMQ+
Sbjct: 265 VRMQR 269
Score = 60.8 bits (146), Expect = 2e-07
Identities = 41/123 (33%), Positives = 66/123 (53%), Gaps = 5/123 (4%)
Frame = +3
Query: 3 LVTSYARVDRDSGETLRLYGRMLREKLQPDHITLTALLDVSTDL--VEQ---IHSHSVKL 167
L+ YAR + E L L+ RM RE +P T +ALL + + +EQ +H+H +K
Sbjct: 247 LIAGYARKG-EGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGKWLHAHLMKS 305
Query: 168 RLNSNPFVGSAMVNQYERYRGLEDALQVFDEIEDVDLVSWNIAIDVCARRGSKKHAAEIF 347
+VG+ +++ Y + + DA +VFD++ VD+VS N + A+ G K AA+ F
Sbjct: 306 SQKLVGYVGNTLLHMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIGYAQHGLGKEAAQQF 365
Query: 348 SRM 356
M
Sbjct: 366 DEM 368
>ref|XP_002525227.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223535524|gb|EEF37193.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 420
Score = 74.3 bits (181), Expect = 2e-11
Identities = 44/123 (35%), Positives = 70/123 (56%), Gaps = 5/123 (4%)
Frame = +3
Query: 3 LVTSYARVDRDSGETLRLYGRMLREKLQPDHITLTALLDVSTDLVEQ-----IHSHSVKL 167
L+T Y++ DR + L L+ +ML +P+H TL++LL S +H+ +K
Sbjct: 153 LITGYSQHDRPK-DALLLFPQMLTLGFRPNHFTLSSLLKASGVSPSDSNGRLLHAFCIKY 211
Query: 168 RLNSNPFVGSAMVNQYERYRGLEDALQVFDEIEDVDLVSWNIAIDVCARRGSKKHAAEIF 347
+ N +VGSA+++ Y R LE+AL +FD + + VSWN I CAR+G ++ A F
Sbjct: 212 GYSCNVYVGSALLDMYARSGHLEEALFIFDGLPSRNEVSWNALIAGCARKGDQELAFSFF 271
Query: 348 SRM 356
S+M
Sbjct: 272 SKM 274
>gb|EXB64625.1| hypothetical protein L484_017957 [Morus notabilis]
Length = 750
Score = 73.9 bits (180), Expect = 2e-11
Identities = 43/125 (34%), Positives = 74/125 (59%), Gaps = 5/125 (4%)
Frame = +3
Query: 3 LVTSYARVDRDSGETLRLYGRMLREKLQPDHITLTALLDVSTDLV-----EQIHSHSVKL 167
L++ Y++ D+ + E L L+ MLR L+P+ TL++LL S D Q+H++ +K
Sbjct: 148 LISGYSQHDQ-AEEALALFPLMLRRGLEPNQFTLSSLLKASGDGTTNKRGRQLHAYCLKC 206
Query: 168 RLNSNPFVGSAMVNQYERYRGLEDALQVFDEIEDVDLVSWNIAIDVCARRGSKKHAAEIF 347
+S+ +VGS++V+ Y RY L +A +FD + + VSWN I +R+G ++A +F
Sbjct: 207 GYDSDVYVGSSLVDMYARYGHLVEARLIFDGLVTKNEVSWNALIAGHSRKGETENALRLF 266
Query: 348 SRMQK 362
S M +
Sbjct: 267 SMMHR 271
Score = 68.2 bits (165), Expect = 1e-09
Identities = 41/116 (35%), Positives = 65/116 (56%), Gaps = 8/116 (6%)
Frame = +3
Query: 39 GET---LRLYGRMLREKLQPDHITLTALLDV--STDLVEQ---IHSHSVKLRLNSNPFVG 194
GET LRL+ M RE +P H T ++L ST +EQ +H+ +K FVG
Sbjct: 257 GETENALRLFSMMHREDFKPTHFTFSSLCTACASTGSLEQGKWVHAQVIKSGGRLVAFVG 316
Query: 195 SAMVNQYERYRGLEDALQVFDEIEDVDLVSWNIAIDVCARRGSKKHAAEIFSRMQK 362
+ +++ Y + +EDA +VFD + D+VSWN ++ AR+G ++A +FS M +
Sbjct: 317 NTLLDMYAKSGSIEDAKKVFDRLVKRDVVSWNSMLNGYARKGETENALRLFSMMHR 372
Score = 59.7 bits (143), Expect = 4e-07
Identities = 41/126 (32%), Positives = 64/126 (50%), Gaps = 8/126 (6%)
Frame = +3
Query: 3 LVTSYARVDRDSGET---LRLYGRMLREKLQPDHITLTALLDV--STDLVEQ---IHSHS 158
++ YAR GET LRL+ M RE +P T ++L ST +EQ +H+H
Sbjct: 350 MLNGYAR----KGETENALRLFSMMHREDFKPTDFTYSSLCTACASTGSLEQGKWVHAHV 405
Query: 159 VKLRLNSNPFVGSAMVNQYERYRGLEDALQVFDEIEDVDLVSWNIAIDVCARRGSKKHAA 338
+K FVG+ +++ Y + +EDA +VFD + D+VSWN + A+ G +
Sbjct: 406 IKSGGRLVAFVGNTLLDMYAKSGSIEDAKKVFDRLVKRDVVSWNSMLRGYAQHGLGRKTV 465
Query: 339 EIFSRM 356
+ F M
Sbjct: 466 QHFEEM 471
>ref|XP_006660454.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Oryza brachyantha]
Length = 877
Score = 73.6 bits (179), Expect = 3e-11
Identities = 41/123 (33%), Positives = 69/123 (56%), Gaps = 5/123 (4%)
Frame = +3
Query: 3 LVTSYARVDRDSGETLRLYGRMLREKLQPDHITLTALLDVSTDLV-----EQIHSHSVKL 167
++T+ ++ D G ++L+ MLR+ LQPD L++LL+ L +Q+H+H +K
Sbjct: 476 MITALSQCDHGEG-AIKLFMEMLRKGLQPDPFVLSSLLNACASLSAYEQGKQVHAHLIKR 534
Query: 168 RLNSNPFVGSAMVNQYERYRGLEDALQVFDEIEDVDLVSWNIAIDVCARRGSKKHAAEIF 347
+ S+ F G+A+V Y + +EDA F + + +VSW+ I A+ G K A E+F
Sbjct: 535 QFMSDVFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKKALELF 594
Query: 348 SRM 356
RM
Sbjct: 595 HRM 597
Score = 57.0 bits (136), Expect = 3e-06
Identities = 33/110 (30%), Positives = 56/110 (50%), Gaps = 5/110 (4%)
Frame = +3
Query: 48 LRLYGRMLREKLQPDHITLTALLDVST-----DLVEQIHSHSVKLRLNSNPFVGSAMVNQ 212
+ L +M L P+ TL+++L + DL QIH +K +S+ ++G +V+
Sbjct: 288 IELLLQMKSSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDM 347
Query: 213 YERYRGLEDALQVFDEIEDVDLVSWNIAIDVCARRGSKKHAAEIFSRMQK 362
Y +++ L+DA +VFD + DLV WN I C+ A +F + K
Sbjct: 348 YAKHQFLDDARKVFDWMSHRDLVLWNALISGCSHGERHGEALSLFCELIK 397
>ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group]
gi|53791352|dbj|BAD52598.1| pentatricopeptide (PPR)
repeat-containing protein-like [Oryza sativa Japonica
Group] gi|215768699|dbj|BAH00928.1| unnamed protein
product [Oryza sativa Japonica Group]
gi|255673214|dbj|BAH91061.1| Os01g0355000 [Oryza sativa
Japonica Group]
Length = 877
Score = 73.6 bits (179), Expect = 3e-11
Identities = 40/123 (32%), Positives = 69/123 (56%), Gaps = 5/123 (4%)
Frame = +3
Query: 3 LVTSYARVDRDSGETLRLYGRMLREKLQPDHITLTALLDVSTDLV-----EQIHSHSVKL 167
++T+ ++ D G ++L+ MLR+ L+PD L++LL+ L +Q+H+H +K
Sbjct: 476 MITALSQCDHGEG-AIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKR 534
Query: 168 RLNSNPFVGSAMVNQYERYRGLEDALQVFDEIEDVDLVSWNIAIDVCARRGSKKHAAEIF 347
+ S+ F G+A+V Y + +EDA F + + +VSW+ I A+ G K A E+F
Sbjct: 535 QFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELF 594
Query: 348 SRM 356
RM
Sbjct: 595 GRM 597
>ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|47848472|dbj|BAD22327.1| pentatricopeptide (PPR)
repeat-containing protein-like [Oryza sativa Japonica
Group] gi|47848643|dbj|BAD22491.1| pentatricopeptide
(PPR) repeat-containing protein-like [Oryza sativa
Japonica Group] gi|113630915|dbj|BAF24596.1|
Os09g0251500 [Oryza sativa Japonica Group]
gi|215767397|dbj|BAG99625.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 877
Score = 73.6 bits (179), Expect = 3e-11
Identities = 40/123 (32%), Positives = 69/123 (56%), Gaps = 5/123 (4%)
Frame = +3
Query: 3 LVTSYARVDRDSGETLRLYGRMLREKLQPDHITLTALLDVSTDLV-----EQIHSHSVKL 167
++T+ ++ D G ++L+ MLR+ L+PD L++LL+ L +Q+H+H +K
Sbjct: 476 MITALSQCDHGEG-AIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKR 534
Query: 168 RLNSNPFVGSAMVNQYERYRGLEDALQVFDEIEDVDLVSWNIAIDVCARRGSKKHAAEIF 347
+ S+ F G+A+V Y + +EDA F + + +VSW+ I A+ G K A E+F
Sbjct: 535 QFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELF 594
Query: 348 SRM 356
RM
Sbjct: 595 GRM 597
Score = 57.8 bits (138), Expect = 1e-06
Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 5/110 (4%)
Frame = +3
Query: 48 LRLYGRMLREKLQPDHITLTALLDVST-----DLVEQIHSHSVKLRLNSNPFVGSAMVNQ 212
+ L +M L P+ L+++L DL QIH +K +S+ ++G +V+
Sbjct: 288 IELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDM 347
Query: 213 YERYRGLEDALQVFDEIEDVDLVSWNIAIDVCARRGSKKHAAEIFSRMQK 362
Y + L+DA++VFD + DL+ WN I C+ G A IF ++K
Sbjct: 348 YAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRK 397
>gb|EEE69272.1| hypothetical protein OsJ_28537 [Oryza sativa Japonica Group]
Length = 784
Score = 73.6 bits (179), Expect = 3e-11
Identities = 40/123 (32%), Positives = 69/123 (56%), Gaps = 5/123 (4%)
Frame = +3
Query: 3 LVTSYARVDRDSGETLRLYGRMLREKLQPDHITLTALLDVSTDLV-----EQIHSHSVKL 167
++T+ ++ D G ++L+ MLR+ L+PD L++LL+ L +Q+H+H +K
Sbjct: 383 MITALSQCDHGEG-AIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKR 441
Query: 168 RLNSNPFVGSAMVNQYERYRGLEDALQVFDEIEDVDLVSWNIAIDVCARRGSKKHAAEIF 347
+ S+ F G+A+V Y + +EDA F + + +VSW+ I A+ G K A E+F
Sbjct: 442 QFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELF 501
Query: 348 SRM 356
RM
Sbjct: 502 GRM 504
Score = 57.8 bits (138), Expect = 1e-06
Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 5/110 (4%)
Frame = +3
Query: 48 LRLYGRMLREKLQPDHITLTALLDVST-----DLVEQIHSHSVKLRLNSNPFVGSAMVNQ 212
+ L +M L P+ L+++L DL QIH +K +S+ ++G +V+
Sbjct: 195 IELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDM 254
Query: 213 YERYRGLEDALQVFDEIEDVDLVSWNIAIDVCARRGSKKHAAEIFSRMQK 362
Y + L+DA++VFD + DL+ WN I C+ G A IF ++K
Sbjct: 255 YAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRK 304
>gb|EAZ11837.1| hypothetical protein OsJ_01713 [Oryza sativa Japonica Group]
Length = 877
Score = 73.6 bits (179), Expect = 3e-11
Identities = 40/123 (32%), Positives = 69/123 (56%), Gaps = 5/123 (4%)
Frame = +3
Query: 3 LVTSYARVDRDSGETLRLYGRMLREKLQPDHITLTALLDVSTDLV-----EQIHSHSVKL 167
++T+ ++ D G ++L+ MLR+ L+PD L++LL+ L +Q+H+H +K
Sbjct: 476 MITALSQCDHGEG-AIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKR 534
Query: 168 RLNSNPFVGSAMVNQYERYRGLEDALQVFDEIEDVDLVSWNIAIDVCARRGSKKHAAEIF 347
+ S+ F G+A+V Y + +EDA F + + +VSW+ I A+ G K A E+F
Sbjct: 535 QFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELF 594
Query: 348 SRM 356
RM
Sbjct: 595 GRM 597
>gb|EOY32495.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
Length = 529
Score = 73.2 bits (178), Expect = 3e-11
Identities = 39/112 (34%), Positives = 61/112 (54%), Gaps = 5/112 (4%)
Frame = +3
Query: 42 ETLRLYGRMLREKLQPDHITLTALLDV-----STDLVEQIHSHSVKLRLNSNPFVGSAMV 206
E L L+G ML ++P+H+TLT LL S +IH +L L+ N F+ SA++
Sbjct: 269 EALNLFGNMLVSGIKPNHVTLTGLLPACGLTGSVQKGREIHGLIYRLGLDVNVFITSALI 328
Query: 207 NQYERYRGLEDALQVFDEIEDVDLVSWNIAIDVCARRGSKKHAAEIFSRMQK 362
+ Y + ++DA VFD I ++ SWN I + G + A E+F RM++
Sbjct: 329 DMYSKCGSVKDARNVFDNIPSKNVASWNALIGCYGKHGMVESAIELFERMRE 380
>ref|XP_004487730.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cicer arietinum]
Length = 863
Score = 72.8 bits (177), Expect = 4e-11
Identities = 36/126 (28%), Positives = 73/126 (57%), Gaps = 6/126 (4%)
Frame = +3
Query: 3 LVTSYARVDRDSGETLRLYGRMLREKLQPDHITLTALLDVST------DLVEQIHSHSVK 164
+++ YA+ G +++ ++++E ++P+ T +++++ T + +Q H++++K
Sbjct: 461 MLSGYAQTGETEGAA-KIFRQLIKEGIKPNEFTFSSIINACTAPTAASEQGKQFHAYAIK 519
Query: 165 LRLNSNPFVGSAMVNQYERYRGLEDALQVFDEIEDVDLVSWNIAIDVCARRGSKKHAAEI 344
+RLN++ V SA+V Y + ++ A +VF + DLVSWN I A+ G K A E+
Sbjct: 520 MRLNNSLCVSSALVTMYAKRGNIDSAHEVFKRQRERDLVSWNSMISGYAQHGQAKKALEV 579
Query: 345 FSRMQK 362
F MQ+
Sbjct: 580 FDEMQR 585
Score = 68.2 bits (165), Expect = 1e-09
Identities = 34/106 (32%), Positives = 65/106 (61%), Gaps = 1/106 (0%)
Frame = +3
Query: 48 LRLYGRMLREKLQPDHITLTALLDVS-TDLVEQIHSHSVKLRLNSNPFVGSAMVNQYERY 224
+ L+ +M RE ++P+H T +A+L V T V ++H+ +K + VG+A+++ Y +
Sbjct: 378 VNLFSQMRREGVKPNHFTYSAILTVQHTVFVSEMHAEVIKTNYEKSSSVGTALLDAYVKL 437
Query: 225 RGLEDALQVFDEIEDVDLVSWNIAIDVCARRGSKKHAAEIFSRMQK 362
+ DA++VF+ IE DL++W+ + A+ G + AA+IF ++ K
Sbjct: 438 GNINDAVKVFEIIETKDLMAWSAMLSGYAQTGETEGAAKIFRQLIK 483
Score = 57.4 bits (137), Expect = 2e-06
Identities = 34/124 (27%), Positives = 63/124 (50%), Gaps = 5/124 (4%)
Frame = +3
Query: 3 LVTSYARVDRDSGETLRLYGRMLREKLQPDHITLTALLDVST-----DLVEQIHSHSVKL 167
L+ Y+R + + E L+ +LR L PD TL+ + + L Q+H +K
Sbjct: 60 LIFRYSR-NNQTKEAFHLFVSLLRSSLTPDESTLSCIFKLCACSFDGTLGRQVHCQCLKF 118
Query: 168 RLNSNPFVGSAMVNQYERYRGLEDALQVFDEIEDVDLVSWNIAIDVCARRGSKKHAAEIF 347
L+++ VG+++V+ Y + + D +VFDE+ + ++VSW + G + E+F
Sbjct: 119 GLSNHVSVGTSLVDMYMKTESVSDGRRVFDEMGERNVVSWTSLFAGYSWNGLNDYVWELF 178
Query: 348 SRMQ 359
+MQ
Sbjct: 179 CQMQ 182
>ref|XP_004298001.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31070,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 584
Score = 72.8 bits (177), Expect = 4e-11
Identities = 39/124 (31%), Positives = 70/124 (56%), Gaps = 5/124 (4%)
Frame = +3
Query: 3 LVTSYARVDRDSGETLRLYGRMLREKLQPDHITLTALLDVSTDLVEQ-----IHSHSVKL 167
++ SY++ DS + L+L+ RM + P+ +TL A++ T L +HS+ +K
Sbjct: 311 MIGSYSQCG-DSVKALQLFSRMRAGGIDPNSVTLLAIISTCTSLSSLQIGCGVHSYVLKS 369
Query: 168 RLNSNPFVGSAMVNQYERYRGLEDALQVFDEIEDVDLVSWNIAIDVCARRGSKKHAAEIF 347
LNS+ F+G+A++N Y + L D+ ++F E+ +D VSW+ ++ R G A ++F
Sbjct: 370 GLNSDIFIGNALINMYAKCGCLTDSHKIFKEMPSIDSVSWSTMVESFGRHGRGNEALKLF 429
Query: 348 SRMQ 359
MQ
Sbjct: 430 LEMQ 433
>gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 882
Score = 72.8 bits (177), Expect = 4e-11
Identities = 40/114 (35%), Positives = 66/114 (57%), Gaps = 6/114 (5%)
Frame = +3
Query: 33 DSGE-TLRLYGRMLREKLQPDHITLTALLDVSTDLV-----EQIHSHSVKLRLNSNPFVG 194
D GE ++L+ +MLR+ L+PD L++LL+ T L +Q+H+H +K + S+ F G
Sbjct: 489 DHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQGKQVHAHLIKRQFTSDVFAG 548
Query: 195 SAMVNQYERYRGLEDALQVFDEIEDVDLVSWNIAIDVCARRGSKKHAAEIFSRM 356
+A+V Y + +EDA F + + +VSW+ I A+ G K A ++F RM
Sbjct: 549 NALVYAYAKCGSIEDADMAFSGLPERGIVSWSAMIGGLAQHGHGKRALDLFHRM 602
Score = 55.1 bits (131), Expect = 1e-05
Identities = 35/110 (31%), Positives = 54/110 (49%), Gaps = 5/110 (4%)
Frame = +3
Query: 48 LRLYGRMLREKLQPDHITLTALLDVST-----DLVEQIHSHSVKLRLNSNPFVGSAMVNQ 212
L L +M L P+ TL+++L +L QIH VK + + FV +V+
Sbjct: 291 LELLLQMKSSGLVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDM 350
Query: 213 YERYRGLEDALQVFDEIEDVDLVSWNIAIDVCARRGSKKHAAEIFSRMQK 362
Y ++ L+DA +VFD + DL+ WN I C+ G +F RM+K
Sbjct: 351 YAKHGFLDDARKVFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRMRK 400
>ref|XP_002509440.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223549339|gb|EEF50827.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 678
Score = 72.8 bits (177), Expect = 4e-11
Identities = 40/123 (32%), Positives = 70/123 (56%), Gaps = 5/123 (4%)
Frame = +3
Query: 3 LVTSYARVDRDSGETLRLYGRMLREKLQPDHITLTALLDVSTDLV-----EQIHSHSVKL 167
++T+Y++ D E L+LY M K++PD ++LL+ +L +Q+H H +K
Sbjct: 513 MITAYSQ-DGQGEEALKLYLEMQDRKIRPDSFVCSSLLNACANLSAYEQGKQVHVHVLKF 571
Query: 168 RLNSNPFVGSAMVNQYERYRGLEDALQVFDEIEDVDLVSWNIAIDVCARRGSKKHAAEIF 347
S+ F G+++VN Y + ++DA + F EI + +VSW+ I A+ G K A ++F
Sbjct: 572 GFISDIFAGNSLVNMYAKCGSIDDADRAFSEIPERGIVSWSAMIGGFAQHGHGKEALQLF 631
Query: 348 SRM 356
+RM
Sbjct: 632 NRM 634
Score = 62.8 bits (151), Expect = 5e-08
Identities = 33/104 (31%), Positives = 60/104 (57%), Gaps = 5/104 (4%)
Frame = +3
Query: 66 MLREKLQPDHITLTALLDVSTDLVE-----QIHSHSVKLRLNSNPFVGSAMVNQYERYRG 230
M+ ++P+ +L+ +++ T L + +IH + +KL + + F +A+V+ Y +
Sbjct: 230 MILSGIRPNEFSLSCMINACTGLEDSSQGRKIHGYLIKLAYDLDLFSANALVDMYAKVGT 289
Query: 231 LEDALQVFDEIEDVDLVSWNIAIDVCARRGSKKHAAEIFSRMQK 362
LE+A++VF+EI D+VSWN I CA R A E+F +M +
Sbjct: 290 LEEAIRVFEEIAKPDIVSWNAIIAGCALREYHCWALELFGKMNR 333
>ref|XP_006854330.1| hypothetical protein AMTR_s00039p00130050 [Amborella trichopoda]
gi|548858006|gb|ERN15797.1| hypothetical protein
AMTR_s00039p00130050 [Amborella trichopoda]
Length = 313
Score = 72.4 bits (176), Expect = 6e-11
Identities = 41/123 (33%), Positives = 69/123 (56%), Gaps = 5/123 (4%)
Frame = +3
Query: 3 LVTSYARVDRDSGETLRLYGRMLREKLQPDHITLTALLDVSTDLVE-----QIHSHSVKL 167
++T+YA + G L L+ +M L+P+ T T+LL ST L + H+ ++K+
Sbjct: 118 MITAYAESGKGDG-ALNLFSQMRENGLKPNPFTFTSLLKASTSLEDVELGKSFHAFALKM 176
Query: 168 RLNSNPFVGSAMVNQYERYRGLEDALQVFDEIEDVDLVSWNIAIDVCARRGSKKHAAEIF 347
+ SN FVGSA+V+ Y + G+EDA VF+ ++ D++ W+ I A G + A +F
Sbjct: 177 QNESNYFVGSALVDMYAKCGGIEDARMVFNGFQERDVIVWSFMISRYAWSGEYEEAFGLF 236
Query: 348 SRM 356
+M
Sbjct: 237 FQM 239
Score = 58.5 bits (140), Expect = 9e-07
Identities = 38/125 (30%), Positives = 63/125 (50%), Gaps = 5/125 (4%)
Frame = +3
Query: 3 LVTSYARVDRDSGETLRLYGRMLREKLQPDHITLTALLDVSTDL-----VEQIHSHSVKL 167
L+ YA++ D + L L+ R+ + + + +L V D+ V IH +KL
Sbjct: 17 LIQGYAQLG-DLNKPLELFRRIHTYGFELNPFAFSTILKVIVDMELLGHVNYIHGCVIKL 75
Query: 168 RLNSNPFVGSAMVNQYERYRGLEDALQVFDEIEDVDLVSWNIAIDVCARRGSKKHAAEIF 347
SN FVGS++++ Y + DA +VF+ I + D+VSW I A G A +F
Sbjct: 76 GFESNAFVGSSLIDGYSANGLIRDAREVFEGILEKDIVSWTGMITAYAESGKGDGALNLF 135
Query: 348 SRMQK 362
S+M++
Sbjct: 136 SQMRE 140
>ref|XP_006849938.1| hypothetical protein AMTR_s00022p00127120 [Amborella trichopoda]
gi|548853536|gb|ERN11519.1| hypothetical protein
AMTR_s00022p00127120 [Amborella trichopoda]
Length = 619
Score = 72.4 bits (176), Expect = 6e-11
Identities = 40/108 (37%), Positives = 60/108 (55%), Gaps = 5/108 (4%)
Frame = +3
Query: 54 LYGRMLREKLQPDHITLTALLDVSTDL-----VEQIHSHSVKLRLNSNPFVGSAMVNQYE 218
+Y M L P+ ITLT L L + QIH ++K LNS+ FVGS++++ Y
Sbjct: 117 MYSMMKEAGLIPNSITLTLLFKACNSLSSVNPLTQIHVEALKRGLNSDGFVGSSLIDGYS 176
Query: 219 RYRGLEDALQVFDEIEDVDLVSWNIAIDVCARRGSKKHAAEIFSRMQK 362
+ R + +A Q F +I VDLVSWN+ I+ + A E FS+M++
Sbjct: 177 KLREIGEARQAFADISKVDLVSWNVMINAYIENSCDEEAIETFSQMRR 224
>ref|XP_004304908.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Fragaria vesca subsp. vesca]
Length = 777
Score = 72.4 bits (176), Expect = 6e-11
Identities = 43/125 (34%), Positives = 72/125 (57%), Gaps = 5/125 (4%)
Frame = +3
Query: 3 LVTSYARVDRDSGETLRLYGRMLREKLQPDHITLTALLDVST-----DLVEQIHSHSVKL 167
+++ YA+ DR S ETL L+ M ++PD TL +++ T DL + IH++ K
Sbjct: 376 MISGYAQHDRFS-ETLALFQEMQLSGIRPDETTLVSVISACTHLAALDLGQWIHAYIRKN 434
Query: 168 RLNSNPFVGSAMVNQYERYRGLEDALQVFDEIEDVDLVSWNIAIDVCARRGSKKHAAEIF 347
RL N F+G+ ++N Y + +E+AL+VF+E + + +WN I A G + + E+F
Sbjct: 435 RLKVNVFLGTTLINMYLKCGCVENALEVFEETAEKGVSTWNALILGLAMNGLVEKSLEMF 494
Query: 348 SRMQK 362
S M+K
Sbjct: 495 SEMKK 499