BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00031162
         (485 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526734.1| DNA-directed RNA polymerase I largest subuni...    85   1e-14
ref|XP_002876429.1| hypothetical protein ARALYDRAFT_486216 [Arab...    77   3e-12
ref|XP_006290488.1| hypothetical protein CARUB_v10016563mg [Caps...    76   5e-12
ref|XP_004513652.1| PREDICTED: DNA-directed RNA polymerase I sub...    75   1e-11
ref|XP_004513648.1| PREDICTED: DNA-directed RNA polymerase I sub...    74   2e-11
ref|XP_004967186.1| PREDICTED: DNA-directed RNA polymerase I sub...    72   6e-11
ref|NP_191325.1| nuclear RNA polymerase A1 [Arabidopsis thaliana...    72   6e-11
ref|XP_006656244.1| PREDICTED: DNA-directed RNA polymerase I sub...    72   8e-11
gb|ACN85329.1| putative RNA polymerase A(I) large subunit [Oryza...    72   8e-11
tpg|DAA45226.1| TPA: putative DNA-directed RNA polymerase family...    72   1e-10
ref|XP_002440173.1| hypothetical protein SORBIDRAFT_09g027223 [S...    72   1e-10
ref|XP_004165748.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...    70   3e-10
ref|XP_004136744.1| PREDICTED: DNA-directed RNA polymerase I sub...    70   3e-10
ref|XP_006588921.1| PREDICTED: DNA-directed RNA polymerase I sub...    69   6e-10
gb|EOY09356.1| Nuclear RNA polymerase A1, putative isoform 2 [Th...    69   6e-10
gb|EOY09355.1| Nuclear RNA polymerase A1, putative isoform 1 [Th...    69   6e-10
gb|ACN85238.1| putative RNA polymerase A(I) large subunit [Oryza...    69   8e-10
ref|XP_002308049.1| predicted protein [Populus trichocarpa]            68   1e-09
ref|XP_006493898.1| PREDICTED: DNA-directed RNA polymerase I sub...    66   5e-09
ref|XP_006421454.1| hypothetical protein CICLE_v10004132mg [Citr...    66   5e-09

>ref|XP_002526734.1| DNA-directed RNA polymerase I largest subunit, putative [Ricinus
           communis] gi|223533923|gb|EEF35648.1| DNA-directed RNA
           polymerase I largest subunit, putative [Ricinus
           communis]
          Length = 1686

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 54/158 (34%), Positives = 79/158 (50%), Gaps = 7/158 (4%)
 Frame = -2

Query: 484 QLRLIVKGDIAGARNLXXXXXXXXXXXXXXXXXXXXXXXSD--IEVASSEH---KTWTSL 320
           QL LIVKGDI GA+ L                           ++    EH   + WTSL
Sbjct: 126 QLELIVKGDIVGAKRLESVSPSEALYPEESDLSHESCPTIHSGVQCNDGEHTRQQGWTSL 185

Query: 319 QHSESRAVLYNFMSDKRKNCDNCGRKNPSITSPVFGWFN-KGLRASDIKANILLGYNVGP 143
           Q +E+ +VL NF+  K K C NC   NP+IT P FGWF+  G+  + I+AN++ G+ +G 
Sbjct: 186 QFTEAMSVLNNFLKPKFKKCKNCESSNPNITKPTFGWFHTSGMSDASIRANVITGHQLGG 245

Query: 142 -TSSESKNSTVTHSRGESGSEMADEHSSLEQKTKEKIK 32
              SE + +T      E  +E  D+HS  ++  K++ K
Sbjct: 246 LLGSEIEGTTDV----EDAAEPGDQHSGTKKHKKKERK 279


>ref|XP_002876429.1| hypothetical protein ARALYDRAFT_486216 [Arabidopsis lyrata subsp.
           lyrata] gi|297322267|gb|EFH52688.1| hypothetical protein
           ARALYDRAFT_486216 [Arabidopsis lyrata subsp. lyrata]
          Length = 1678

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 49/154 (31%), Positives = 75/154 (48%), Gaps = 3/154 (1%)
 Frame = -2

Query: 484 QLRLIVKGDIAGARNLXXXXXXXXXXXXXXXXXXXXXXXSD-IEVASSEHKTWTSLQHSE 308
           QL+LI+KGDI  A+ L                       S+  E +  E + WTSLQ +E
Sbjct: 138 QLKLIIKGDIVSAKQLESNTPTKSDSSDVSCESGVTTDSSEGCEDSDMEDQRWTSLQFAE 197

Query: 307 SRAVLYNFMSDKRKNCDNCGRKNPSITSPVFGWFN-KGLRASDIKANILLGYNVGPTSSE 131
             AV+ NFM    K+C+ C   NP +  P+FGW   K ++ SDI AN++ G  +  ++S 
Sbjct: 198 VTAVMKNFMRLSSKSCNRCKAVNPQLEKPMFGWVRMKAMKGSDIVANVIRGLKLKKSTSS 257

Query: 130 SKNSTVTHSRG-ESGSEMADEHSSLEQKTKEKIK 32
            +N       G ++ SE+ D      +K+ E +K
Sbjct: 258 VENPDDFDDSGIDALSEVEDGDKETREKSTEVVK 291


>ref|XP_006290488.1| hypothetical protein CARUB_v10016563mg [Capsella rubella]
           gi|482559195|gb|EOA23386.1| hypothetical protein
           CARUB_v10016563mg [Capsella rubella]
          Length = 1651

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 49/154 (31%), Positives = 72/154 (46%), Gaps = 5/154 (3%)
 Frame = -2

Query: 484 QLRLIVKGDIAGARNLXXXXXXXXXXXXXXXXXXXXXXXSD----IEVASSEHKTWTSLQ 317
           QL+LI+KGDI  A+ L                       +D     E    E + WTSLQ
Sbjct: 125 QLKLIMKGDIVSAKQLEVKSDSTSTNSEDIEVSCESGVTNDSSQECEDPDMEDQRWTSLQ 184

Query: 316 HSESRAVLYNFMSDKRKNCDNCGRKNPSITSPVFGWFN-KGLRASDIKANILLGYNVGPT 140
            +E  AV+ NFM    K C+ C  KNP +  P+FGW   KG+ AS + AN++ G  V  +
Sbjct: 185 FAEVTAVMKNFMKLTSKECNKCKAKNPKLEKPMFGWVRMKGMNASAVGANLIRGLKVKKS 244

Query: 139 SSESKNSTVTHSRGESGSEMADEHSSLEQKTKEK 38
           +S  +N        +SG +   E    +++ +EK
Sbjct: 245 TSSVENP------DDSGIDALSEAEDSDKEKREK 272


>ref|XP_004513652.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Cicer
           arietinum]
          Length = 1660

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 50/157 (31%), Positives = 75/157 (47%), Gaps = 9/157 (5%)
 Frame = -2

Query: 484 QLRLIVKGDIAGARNLXXXXXXXXXXXXXXXXXXXXXXXSDIEVASSEH--KTWTSLQHS 311
           QL LI+KG+IA A+NL                        D + +S+E   + WTSLQ S
Sbjct: 123 QLELIMKGNIAKAKNLDEINLDESADLCDGD---------DSQCSSAEQLGENWTSLQFS 173

Query: 310 ESRAVLYNFMSDKRKNCDNCGRKNPSITSPVFGWFN-KGLRASDIKANILLGYNVGPTSS 134
           E+ +VL  F+  + + C NCG  NP IT P FGWF+ K L A+  +AN++ G +V   S 
Sbjct: 174 EAMSVLRKFLKKEYRKCQNCGYINPKITIPTFGWFHVKALSAAQARANVISGNDVSLASE 233

Query: 133 ------ESKNSTVTHSRGESGSEMADEHSSLEQKTKE 41
                    N   T     +  ++A+ ++    K K+
Sbjct: 234 IIHDDISLGNGDTTDVEDITSGDIANSNAKRHNKEKQ 270


>ref|XP_004513648.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Cicer
           arietinum]
          Length = 1650

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 46/134 (34%), Positives = 69/134 (51%), Gaps = 3/134 (2%)
 Frame = -2

Query: 484 QLRLIVKGDIAGARNLXXXXXXXXXXXXXXXXXXXXXXXSDIEVASSEH--KTWTSLQHS 311
           QL LI+KG+IA A+NL                        D + +S E   + WTSLQ S
Sbjct: 123 QLELIMKGNIAKAKNLDAINLDESADLSDGN---------DSQCSSDEQLGENWTSLQFS 173

Query: 310 ESRAVLYNFMSDKRKNCDNCGRKNPSITSPVFGWFN-KGLRASDIKANILLGYNVGPTSS 134
           E+ +VL  F+  + + C NCG  NP IT P FGWF+ K L A+  +AN++ G +    +S
Sbjct: 174 EAMSVLRKFLKKEFRKCQNCGNINPKITKPTFGWFHVKALSAAQARANVISGIDAS-LAS 232

Query: 133 ESKNSTVTHSRGES 92
           E  +  ++   G++
Sbjct: 233 EIIHDDISLGNGDT 246


>ref|XP_004967186.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Setaria
           italica]
          Length = 1682

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 46/161 (28%), Positives = 70/161 (43%)
 Frame = -2

Query: 484 QLRLIVKGDIAGARNLXXXXXXXXXXXXXXXXXXXXXXXSDIEVASSEHKTWTSLQHSES 305
           +L L+VKGD+A A+NL                        D      + KTWTS+Q  E 
Sbjct: 143 ELELLVKGDVARAKNLEDSGKRASPSEEDEDITEATSC--DKPSPEKDKKTWTSVQLKEV 200

Query: 304 RAVLYNFMSDKRKNCDNCGRKNPSITSPVFGWFNKGLRASDIKANILLGYNVGPTSSESK 125
            ++    M  ++K C  C  K+P+ +SP+FGW  K   AS ++AN +  + +       K
Sbjct: 201 LSIFSKIMKKRQKKCAKCDMKSPTFSSPIFGWLVKDTSASAVRANAIADFKL-------K 253

Query: 124 NSTVTHSRGESGSEMADEHSSLEQKTKEKIKLDDLPPEVIK 2
                HS GE+G    DE  +  Q      ++  L  + IK
Sbjct: 254 GDGGAHSSGETGVSGFDEERTSPQSKGSINEVRHLSDDTIK 294


>ref|NP_191325.1| nuclear RNA polymerase A1 [Arabidopsis thaliana]
           gi|4678281|emb|CAB41189.1| DNA-directed RNA polymerase I
           190K chain-like protein [Arabidopsis thaliana]
           gi|332646163|gb|AEE79684.1| nuclear RNA polymerase A1
           [Arabidopsis thaliana]
          Length = 1670

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 53/170 (31%), Positives = 78/170 (45%), Gaps = 11/170 (6%)
 Frame = -2

Query: 484 QLRLIVKGDIAGARNLXXXXXXXXXXXXXXXXXXXXXXXSD-IEVASSEHKTWTSLQHSE 308
           QL+LI+KGDI  A+ L                       S+  E +  E + WTSLQ +E
Sbjct: 138 QLKLIIKGDIVSAKQLESNTPTKSKSSDESCESVVTTDSSEECEDSDVEDQRWTSLQFAE 197

Query: 307 SRAVLYNFMSDKRKNCDNCGRKNPSITSPVFGWFN-KGLRASDIKANILLGYNVGPTSSE 131
             AVL NFM    K+C  C   NP +  P+FGW   + ++ SD+ AN++ G  +  ++S 
Sbjct: 198 VTAVLKNFMRLSSKSCSRCKGINPKLEKPMFGWVRMRAMKDSDVGANVIRGLKLKKSTSS 257

Query: 130 SKNSTVTHSRG-ESGSEMADEHSSLEQKTKE--------KIKLDDLPPEV 8
            +N       G ++ SE+ D      +K+ E          K D LP EV
Sbjct: 258 VENPDGFDDSGIDALSEVEDGDKETREKSTEVAAEFEEHNSKRDLLPSEV 307


>ref|XP_006656244.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Oryza
           brachyantha]
          Length = 1755

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 37/107 (34%), Positives = 55/107 (51%)
 Frame = -2

Query: 484 QLRLIVKGDIAGARNLXXXXXXXXXXXXXXXXXXXXXXXSDIEVASSEHKTWTSLQHSES 305
           +L L+VKGDIA A+NL                            + SE+KTWTS+Q  E 
Sbjct: 124 ELELLVKGDIAHAKNLEDSGGKVLLEEDDKTEATSGDKS---TCSESENKTWTSIQLKEV 180

Query: 304 RAVLYNFMSDKRKNCDNCGRKNPSITSPVFGWFNKGLRASDIKANIL 164
            ++  NFM  ++K C +C +KNP I+ P++GW  K    S ++AN +
Sbjct: 181 LSIFANFMKKRQKKCTHCNKKNPKISHPIYGWLIKDADISAVRANAI 227


>gb|ACN85329.1| putative RNA polymerase A(I) large subunit [Oryza brachyantha]
          Length = 1138

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 37/107 (34%), Positives = 55/107 (51%)
 Frame = -2

Query: 484 QLRLIVKGDIAGARNLXXXXXXXXXXXXXXXXXXXXXXXSDIEVASSEHKTWTSLQHSES 305
           +L L+VKGDIA A+NL                            + SE+KTWTS+Q  E 
Sbjct: 124 ELELLVKGDIAHAKNLEDSGGKVLLEEDDKTEATSGDKS---TCSESENKTWTSIQLKEV 180

Query: 304 RAVLYNFMSDKRKNCDNCGRKNPSITSPVFGWFNKGLRASDIKANIL 164
            ++  NFM  ++K C +C +KNP I+ P++GW  K    S ++AN +
Sbjct: 181 LSIFANFMKKRQKKCTHCNKKNPKISHPIYGWLIKDADISAVRANAI 227


>tpg|DAA45226.1| TPA: putative DNA-directed RNA polymerase family protein [Zea mays]
          Length = 548

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 45/151 (29%), Positives = 71/151 (47%), Gaps = 1/151 (0%)
 Frame = -2

Query: 484 QLRLIVKGDIAGARNLXXXXXXXXXXXXXXXXXXXXXXXSDIEVASSEHKTWTSLQHSES 305
           +L L+VKGDI  A+NL                       +   V   + KTWTS+Q  E 
Sbjct: 125 ELELLVKGDIVCAKNLEDSVEEAYLSKEDENMNKTTSGDNSSSV--KDKKTWTSIQLKEV 182

Query: 304 RAVLYNFMSDKRKNCDNCGRKNPSITSPVFGWFNKGLRASDIKANILLGYNVGPTSSESK 125
            ++    M  ++K C  C  K+P+I+SP+FGW  K  +AS ++ N +  + +       K
Sbjct: 183 LSIFSKIMKKRQKKCAKCDMKSPTISSPIFGWLVKDTKASAVRTNAIADFKL-------K 235

Query: 124 NSTVTHSRGESG-SEMADEHSSLEQKTKEKI 35
                H+ GE+G S + +E SS    +K+ I
Sbjct: 236 GDGDIHNSGETGVSGLEEESSSPGMVSKDSI 266


>ref|XP_002440173.1| hypothetical protein SORBIDRAFT_09g027223 [Sorghum bicolor]
           gi|241945458|gb|EES18603.1| hypothetical protein
           SORBIDRAFT_09g027223 [Sorghum bicolor]
          Length = 799

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 41/141 (29%), Positives = 65/141 (46%)
 Frame = -2

Query: 484 QLRLIVKGDIAGARNLXXXXXXXXXXXXXXXXXXXXXXXSDIEVASSEHKTWTSLQHSES 305
           +L L+VKGDI GA+NL                           V   ++KTWTS+Q  E 
Sbjct: 125 ELELLVKGDIVGAKNLEDSVKEAYLSEEDENITETTSGDKSSSV--KDNKTWTSVQLKEV 182

Query: 304 RAVLYNFMSDKRKNCDNCGRKNPSITSPVFGWFNKGLRASDIKANILLGYNVGPTSSESK 125
            ++    M  ++  C  C  K+P+I+SP+FGW  K   AS ++AN +  + +       K
Sbjct: 183 LSIFSKIMKKRQTKCAKCDMKSPTISSPIFGWLVKDTSASAVRANAIADFKL-------K 235

Query: 124 NSTVTHSRGESGSEMADEHSS 62
                H+ G++G    DE ++
Sbjct: 236 GDGDAHNSGDTGVSGLDEETT 256


>ref|XP_004165748.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase I
           subunit RPA1-like [Cucumis sativus]
          Length = 1652

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 40/118 (33%), Positives = 62/118 (52%), Gaps = 1/118 (0%)
 Frame = -2

Query: 358 EVASSEHKTWTSLQHSESRAVLYNFMSDKRKNCDNCGRKNPSITSPVFGWFN-KGLRASD 182
           E  + + +TWTSLQ SE+ +V+  F+  K+ NC  CG K+P IT P FGWF+ KGL    
Sbjct: 165 ERKNGQPETWTSLQFSEAISVVTKFLKPKQSNCKYCGAKSPKITKPTFGWFHMKGLAGVQ 224

Query: 181 IKANILLGYNVGPTSSESKNSTVTHSRGESGSEMADEHSSLEQKTKEKIKLDDLPPEV 8
            +AN +            ++  V+ S G  G    +E ++ E   ++    +D+ PEV
Sbjct: 225 KRANAI-----------RRSKPVSVSSGAEGVSSLEEETTTEATVED---FEDVSPEV 268


>ref|XP_004136744.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Cucumis
           sativus]
          Length = 1650

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 40/118 (33%), Positives = 62/118 (52%), Gaps = 1/118 (0%)
 Frame = -2

Query: 358 EVASSEHKTWTSLQHSESRAVLYNFMSDKRKNCDNCGRKNPSITSPVFGWFN-KGLRASD 182
           E  + + +TWTSLQ SE+ +V+  F+  K+ NC  CG K+P IT P FGWF+ KGL    
Sbjct: 159 ERKNGQPETWTSLQFSEAISVVTKFLKPKQSNCKYCGAKSPKITKPTFGWFHMKGLAGVQ 218

Query: 181 IKANILLGYNVGPTSSESKNSTVTHSRGESGSEMADEHSSLEQKTKEKIKLDDLPPEV 8
            +AN +            ++  V+ S G  G    +E ++ E   ++    +D+ PEV
Sbjct: 219 KRANAI-----------RRSKPVSVSSGAEGVSSLEEETTTEATVED---FEDVSPEV 262


>ref|XP_006588921.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Glycine
           max]
          Length = 1651

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 47/157 (29%), Positives = 76/157 (48%), Gaps = 7/157 (4%)
 Frame = -2

Query: 484 QLRLIVKGDIAGARNLXXXXXXXXXXXXXXXXXXXXXXXSDIEVASSEH--KTWTSLQHS 311
           QL LI+KGDI  A+ L                        + +  S+E   + WTSLQ S
Sbjct: 123 QLELIMKGDIIRAKRLESIIPGKSVDSFNPDESIHPGDGDESQCYSAEQLGENWTSLQFS 182

Query: 310 ESRAVLYNFMSDKRKNCDNCGRKNPSITSPVFGWFNKG-LRASDIKANILLGYNVGPTSS 134
           E+ +VL   ++ K K C  CG KNP I+ P FGWF+   L A + +A+      +    S
Sbjct: 183 EAMSVLRKLLTKKHKKCQKCGAKNPKISKPTFGWFHMNVLSADETRAD-----TIRSVES 237

Query: 133 ESKNSTVTHSRGESGSEMADEHSS----LEQKTKEKI 35
           E+ N  ++   G++ +++ D  S+     +++ KEK+
Sbjct: 238 ETTNDDISLGGGDT-TDVEDITSAGTAKRDKRKKEKL 273


>gb|EOY09356.1| Nuclear RNA polymerase A1, putative isoform 2 [Theobroma cacao]
          Length = 1689

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 48/142 (33%), Positives = 64/142 (45%), Gaps = 1/142 (0%)
 Frame = -2

Query: 484 QLRLIVKGDIAGARNLXXXXXXXXXXXXXXXXXXXXXXXSDIEVASSEHKTWTSLQHSES 305
           QL+LI  GDI GA+ L                            A    K WTSLQ  E+
Sbjct: 123 QLKLIGNGDIVGAKRLDSDSADASSYSDYNEGSQESGSIVHNSEAVKP-KEWTSLQLMEA 181

Query: 304 RAVLYNFMSDKRKNCDNCGRKNPSITSPVFGWFN-KGLRASDIKANILLGYNVGPTSSES 128
            +VL NF+  K   C NC  KNP+IT PVFGW +  G+  + ++ N++ G  +  T S+ 
Sbjct: 182 MSVLNNFLKLKYNKCKNCDAKNPNITKPVFGWLHMNGMLGAQMRENVIRGCKMVDTFSDE 241

Query: 127 KNSTVTHSRGESGSEMADEHSS 62
                      SG E AD+ SS
Sbjct: 242 AG---------SGLEDADDVSS 254


>gb|EOY09355.1| Nuclear RNA polymerase A1, putative isoform 1 [Theobroma cacao]
          Length = 1665

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 48/142 (33%), Positives = 64/142 (45%), Gaps = 1/142 (0%)
 Frame = -2

Query: 484 QLRLIVKGDIAGARNLXXXXXXXXXXXXXXXXXXXXXXXSDIEVASSEHKTWTSLQHSES 305
           QL+LI  GDI GA+ L                            A    K WTSLQ  E+
Sbjct: 123 QLKLIGNGDIVGAKRLDSDSADASSYSDYNEGSQESGSIVHNSEAVKP-KEWTSLQLMEA 181

Query: 304 RAVLYNFMSDKRKNCDNCGRKNPSITSPVFGWFN-KGLRASDIKANILLGYNVGPTSSES 128
            +VL NF+  K   C NC  KNP+IT PVFGW +  G+  + ++ N++ G  +  T S+ 
Sbjct: 182 MSVLNNFLKLKYNKCKNCDAKNPNITKPVFGWLHMNGMLGAQMRENVIRGCKMVDTFSDE 241

Query: 127 KNSTVTHSRGESGSEMADEHSS 62
                      SG E AD+ SS
Sbjct: 242 AG---------SGLEDADDVSS 254


>gb|ACN85238.1| putative RNA polymerase A(I) large subunit [Oryza minuta]
          Length = 563

 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 47/158 (29%), Positives = 74/158 (46%), Gaps = 4/158 (2%)
 Frame = -2

Query: 484 QLRLIVKGDIAGARNLXXXXXXXXXXXXXXXXXXXXXXXSDIEVASSEHKTWTSLQHSES 305
           +L L+V+GDIA A+NL                       +  E    E+KTWTS+Q  E+
Sbjct: 132 ELELLVRGDIAHAKNLEDLGGKVLSEEDDETEATSGDKSARSE---RENKTWTSIQLKEA 188

Query: 304 RAVLYNFMSDKRKNCDNCGRKNPSITSPVFGWFNKGLRASDIKANILLGYNVGPTSSESK 125
            ++    M  K+K C +C +KNP I+ P++GW  K   +S ++AN +    +      S 
Sbjct: 189 LSIFAKLMKKKQKKCAHCEKKNPIISHPIYGWLIKDTTSSSVRANAIANAKL------SG 242

Query: 124 NSTVTHSR--GESG--SEMADEHSSLEQKTKEKIKLDD 23
           +  V  SR  G SG   E+    +S  + T E  ++ D
Sbjct: 243 DGHVHDSRETGVSGLDEELTSPGTSSRRSTNETRRISD 280


>ref|XP_002308049.1| predicted protein [Populus trichocarpa]
          Length = 1168

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 53/177 (29%), Positives = 80/177 (45%), Gaps = 17/177 (9%)
 Frame = -2

Query: 484 QLRLIVKGDIAGARNLXXXXXXXXXXXXXXXXXXXXXXXSDIEVA-----SSEHKTWTSL 320
           QL LI+KGD+ GA+ L                                   S+   WTSL
Sbjct: 121 QLELIIKGDVVGAKRLDSFSPIEASLPEDSDGSSESCSTIHSGARHPNNEQSKQSEWTSL 180

Query: 319 QHSESRAVLYNFMSDKRKNCDNCGRKNPSITSPVFGWFN-KGLRASDIKANILLGYNV-G 146
           Q SE+ ++L NF+  + K C NC   NP+I  P FGWF+  GL  + I++N++    + G
Sbjct: 181 QLSEAMSILNNFLKLESKKCKNCSASNPNIRKPTFGWFHWAGLSNAAIRSNLIKQQTIEG 240

Query: 145 PTSS------ESKNSTVTHSRGESGSEM-ADEHSSLE-QKTKEKIKLDD--LPPEVI 5
           P         +++++T + S  ES +     EH  L+ Q T +K  L    LP E +
Sbjct: 241 PFGGAFEELIDAEDATKSPSNKESATNRNLKEHQKLQHQFTSQKDALSSQLLPSEAM 297


>ref|XP_006493898.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Citrus
           sinensis]
          Length = 1715

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 39/124 (31%), Positives = 59/124 (47%), Gaps = 7/124 (5%)
 Frame = -2

Query: 484 QLRLIVKGDIAGARNLXXXXXXXXXXXXXXXXXXXXXXXSDI------EVASSEHKTWTS 323
           +L LI+KGDI  A++L                                 V + + + WTS
Sbjct: 123 KLELIIKGDIIAAKSLDLDLPSESSNPEDSDVSNKSSCSMVTPRGNYDNVRNLKPQEWTS 182

Query: 322 LQHSESRAVLYNFMSDKRKNCDNCGRKNPSITSPVFGWFN-KGLRASDIKANILLGYNVG 146
           LQ +E++  L  F+  +   C NC  KNP I+ P FGW +  G+  +DI+AN++ G N+G
Sbjct: 183 LQFAEAKLALLQFLKIETTKCGNCKAKNPRISKPTFGWIHMNGMPHADIRANLIRGCNLG 242

Query: 145 PTSS 134
            T S
Sbjct: 243 ETFS 246


>ref|XP_006421454.1| hypothetical protein CICLE_v10004132mg [Citrus clementina]
           gi|557523327|gb|ESR34694.1| hypothetical protein
           CICLE_v10004132mg [Citrus clementina]
          Length = 1715

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 39/124 (31%), Positives = 59/124 (47%), Gaps = 7/124 (5%)
 Frame = -2

Query: 484 QLRLIVKGDIAGARNLXXXXXXXXXXXXXXXXXXXXXXXSDI------EVASSEHKTWTS 323
           +L LI+KGDI  A++L                                 V + + + WTS
Sbjct: 123 KLELIIKGDIIAAKSLDLDLPSESSNPEDSDVSNKSSCSMVTPRGNYDNVRNLKPQEWTS 182

Query: 322 LQHSESRAVLYNFMSDKRKNCDNCGRKNPSITSPVFGWFN-KGLRASDIKANILLGYNVG 146
           LQ +E++  L  F+  +   C NC  KNP I+ P FGW +  G+  +DI+AN++ G N+G
Sbjct: 183 LQFAEAKLALLQFLKIETTKCGNCKAKNPRISKPTFGWIHMNGMPHADIRANLIRGCNLG 242

Query: 145 PTSS 134
            T S
Sbjct: 243 ETFS 246