BLASTX nr result
ID: Zingiber25_contig00031132
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00031132
(850 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004307088.1| PREDICTED: pentatricopeptide repeat-containi... 54 6e-10
gb|AFW73075.1| hypothetical protein ZEAMMB73_887223 [Zea mays] 57 2e-09
ref|NP_001144625.1| uncharacterized protein LOC100277643 [Zea ma... 57 2e-09
gb|ACR36806.1| unknown [Zea mays] 57 2e-09
gb|EMJ16546.1| hypothetical protein PRUPE_ppa005397mg [Prunus pe... 54 2e-09
ref|NP_001047900.1| Os02g0711100 [Oryza sativa Japonica Group] g... 54 6e-09
ref|XP_002301697.1| predicted protein [Populus trichocarpa] 54 8e-09
ref|XP_006383312.1| hypothetical protein POPTR_0005s14380g, part... 54 8e-09
dbj|BAJ94382.1| predicted protein [Hordeum vulgare subsp. vulgare] 55 4e-08
ref|XP_003570219.1| PREDICTED: pentatricopeptide repeat-containi... 55 5e-08
ref|XP_004953662.1| PREDICTED: pentatricopeptide repeat-containi... 49 2e-06
gb|EAZ24364.1| hypothetical protein OsJ_08117 [Oryza sativa Japo... 54 2e-06
ref|XP_003552963.1| PREDICTED: pentatricopeptide repeat-containi... 57 8e-06
>ref|XP_004307088.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 491
Score = 53.5 bits (127), Expect(2) = 6e-10
Identities = 21/38 (55%), Positives = 27/38 (71%)
Frame = +3
Query: 216 RYLNDQQSPYVWNFMVDLLGNNLLFDTMWNSVRSMQFE 329
R LN+ SPY WN +VDLLG N FD MW++++SM E
Sbjct: 101 RQLNEHHSPYAWNLVVDLLGKNCFFDAMWDAIKSMNKE 138
Score = 37.4 bits (85), Expect(2) = 6e-10
Identities = 16/36 (44%), Positives = 25/36 (69%)
Frame = +2
Query: 95 SVDHSLDNAGVLISSQDAEALLKLSYSLSGVAVGFF 202
SV+ +L++ G+ +S D E +LKLSY+ G A+ FF
Sbjct: 61 SVEETLNDTGIRVSQHDVEEVLKLSYAFPGPALKFF 96
>gb|AFW73075.1| hypothetical protein ZEAMMB73_887223 [Zea mays]
Length = 492
Score = 57.0 bits (136), Expect(2) = 2e-09
Identities = 29/67 (43%), Positives = 37/67 (55%)
Frame = +3
Query: 210 GIRYLNDQQSPYVWNFMVDLLGNNLLFDTMWNSVRSMQFEAFSHYAKLWISPSSHCFVPC 389
G RYL + SPY WN +VD+LG N LF+ MW++V+SMQ + A SS P
Sbjct: 99 GYRYLGHEHSPYSWNLLVDILGKNRLFEPMWDTVKSMQSQQLLSLATFASIFSSLAATPG 158
Query: 390 VMPNSAF 410
P AF
Sbjct: 159 GSPLKAF 165
Score = 32.3 bits (72), Expect(2) = 2e-09
Identities = 18/67 (26%), Positives = 27/67 (40%)
Frame = +2
Query: 2 SPPSPLTLRQCDHTRSNDAFAPIAVSNPNPSSVDHSLDNAGVLISSQDAEALLKLSYSLS 181
+P P D F I S + ++ LD A + +S D E +L+ SY+
Sbjct: 29 APALPTNKEAPDMAPKTRIFCDILASRADDEELNAELDKADIRVSIADVEQVLRFSYAHP 88
Query: 182 GVAVGFF 202
A FF
Sbjct: 89 RAAAAFF 95
>ref|NP_001144625.1| uncharacterized protein LOC100277643 [Zea mays]
gi|195644788|gb|ACG41862.1| hypothetical protein [Zea
mays]
Length = 492
Score = 57.0 bits (136), Expect(2) = 2e-09
Identities = 29/67 (43%), Positives = 37/67 (55%)
Frame = +3
Query: 210 GIRYLNDQQSPYVWNFMVDLLGNNLLFDTMWNSVRSMQFEAFSHYAKLWISPSSHCFVPC 389
G RYL + SPY WN +VD+LG N LF+ MW++V+SMQ + A SS P
Sbjct: 99 GYRYLGHEHSPYSWNLLVDILGKNRLFEPMWDTVKSMQSQQLLSLATFASIFSSLAATPG 158
Query: 390 VMPNSAF 410
P AF
Sbjct: 159 GSPLKAF 165
Score = 32.3 bits (72), Expect(2) = 2e-09
Identities = 18/67 (26%), Positives = 27/67 (40%)
Frame = +2
Query: 2 SPPSPLTLRQCDHTRSNDAFAPIAVSNPNPSSVDHSLDNAGVLISSQDAEALLKLSYSLS 181
+P P D F I S + ++ LD A + +S D E +L+ SY+
Sbjct: 29 APALPTNKEAPDMAPKTRIFCDILASRADDEELNAELDKADIRVSIADVEQVLRFSYAHP 88
Query: 182 GVAVGFF 202
A FF
Sbjct: 89 RAAAAFF 95
>gb|ACR36806.1| unknown [Zea mays]
Length = 369
Score = 57.0 bits (136), Expect(2) = 2e-09
Identities = 29/67 (43%), Positives = 37/67 (55%)
Frame = +3
Query: 210 GIRYLNDQQSPYVWNFMVDLLGNNLLFDTMWNSVRSMQFEAFSHYAKLWISPSSHCFVPC 389
G RYL + SPY WN +VD+LG N LF+ MW++V+SMQ + A SS P
Sbjct: 99 GYRYLGHEHSPYSWNLLVDILGKNRLFEPMWDTVKSMQSQQLLSLATFASIFSSLAATPG 158
Query: 390 VMPNSAF 410
P AF
Sbjct: 159 GSPLKAF 165
Score = 32.3 bits (72), Expect(2) = 2e-09
Identities = 18/67 (26%), Positives = 27/67 (40%)
Frame = +2
Query: 2 SPPSPLTLRQCDHTRSNDAFAPIAVSNPNPSSVDHSLDNAGVLISSQDAEALLKLSYSLS 181
+P P D F I S + ++ LD A + +S D E +L+ SY+
Sbjct: 29 APALPTNKEAPDMAPKTRIFCDILASRADDEELNAELDKADIRVSIADVEQVLRFSYAHP 88
Query: 182 GVAVGFF 202
A FF
Sbjct: 89 RAAAAFF 95
>gb|EMJ16546.1| hypothetical protein PRUPE_ppa005397mg [Prunus persica]
Length = 463
Score = 54.3 bits (129), Expect(2) = 2e-09
Identities = 21/37 (56%), Positives = 28/37 (75%)
Frame = +3
Query: 219 YLNDQQSPYVWNFMVDLLGNNLLFDTMWNSVRSMQFE 329
+LND SPY WN +VDLLG N FD MW++++SM+ E
Sbjct: 75 HLNDYHSPYAWNLVVDLLGKNCFFDAMWDAIKSMRKE 111
Score = 34.7 bits (78), Expect(2) = 2e-09
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = +2
Query: 74 VSNPNPSSVDHSLDNAGVLISSQDAEALLKLSYSLSGVAVGFF 202
V+ + SV+ L V ++ +D E +LKLSY+ G AV FF
Sbjct: 27 VAKTHTLSVEERLAETSVRVTQEDVEEVLKLSYAFPGPAVKFF 69
>ref|NP_001047900.1| Os02g0711100 [Oryza sativa Japonica Group]
gi|41052650|dbj|BAD07498.1| pentatricopeptide (PPR)
repeat-containing protein-like [Oryza sativa Japonica
Group] gi|41052866|dbj|BAD07780.1| pentatricopeptide
(PPR) repeat-containing protein-like [Oryza sativa
Japonica Group] gi|113537431|dbj|BAF09814.1|
Os02g0711100 [Oryza sativa Japonica Group]
gi|125540864|gb|EAY87259.1| hypothetical protein
OsI_08660 [Oryza sativa Indica Group]
gi|215687282|dbj|BAG91847.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 489
Score = 53.5 bits (127), Expect(2) = 6e-09
Identities = 29/67 (43%), Positives = 36/67 (53%)
Frame = +3
Query: 210 GIRYLNDQQSPYVWNFMVDLLGNNLLFDTMWNSVRSMQFEAFSHYAKLWISPSSHCFVPC 389
G R+L Q SPY WN +VDLLG N LF+ MW++V SM+ + A SS P
Sbjct: 96 GHRHLRHQHSPYSWNLVVDLLGKNRLFEPMWDTVSSMRTQGLLSLATFASVFSSLAANPA 155
Query: 390 VMPNSAF 410
P AF
Sbjct: 156 SSPLRAF 162
Score = 33.9 bits (76), Expect(2) = 6e-09
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +2
Query: 98 VDHSLDNAGVLISSQDAEALLKLSYSLSGVAVGFF 202
VD +LD+A V ++S D E +L+ SY+ AV FF
Sbjct: 58 VDAALDDADVRVTSSDVEQVLRFSYAHPRAAVAFF 92
>ref|XP_002301697.1| predicted protein [Populus trichocarpa]
Length = 499
Score = 53.5 bits (127), Expect(2) = 8e-09
Identities = 21/36 (58%), Positives = 28/36 (77%)
Frame = +3
Query: 222 LNDQQSPYVWNFMVDLLGNNLLFDTMWNSVRSMQFE 329
LND+ SPY WN +VDLLG N +FD MW +++SM+ E
Sbjct: 108 LNDKHSPYSWNLVVDLLGKNSMFDAMWGAIKSMKRE 143
Score = 33.5 bits (75), Expect(2) = 8e-09
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +2
Query: 74 VSNPNPSSVDHSLDNAGVLISSQDAEALLKLSYSLSGVAVGFF 202
++N +V+ LD + + D E +LKLSYS G AV FF
Sbjct: 59 IANTPSHNVESVLDATVIRVKQTDVEQVLKLSYSSPGSAVKFF 101
>ref|XP_006383312.1| hypothetical protein POPTR_0005s14380g, partial [Populus
trichocarpa] gi|550338919|gb|ERP61109.1| hypothetical
protein POPTR_0005s14380g, partial [Populus trichocarpa]
Length = 497
Score = 53.5 bits (127), Expect(2) = 8e-09
Identities = 21/36 (58%), Positives = 28/36 (77%)
Frame = +3
Query: 222 LNDQQSPYVWNFMVDLLGNNLLFDTMWNSVRSMQFE 329
LND+ SPY WN +VDLLG N +FD MW +++SM+ E
Sbjct: 108 LNDKHSPYSWNLVVDLLGKNSMFDAMWGAIKSMKRE 143
Score = 33.5 bits (75), Expect(2) = 8e-09
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +2
Query: 74 VSNPNPSSVDHSLDNAGVLISSQDAEALLKLSYSLSGVAVGFF 202
++N +V+ LD + + D E +LKLSYS G AV FF
Sbjct: 59 IANTPSHNVESVLDATVIRVKQTDVEQVLKLSYSSPGSAVKFF 101
>dbj|BAJ94382.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 488
Score = 54.7 bits (130), Expect(2) = 4e-08
Identities = 29/67 (43%), Positives = 37/67 (55%)
Frame = +3
Query: 210 GIRYLNDQQSPYVWNFMVDLLGNNLLFDTMWNSVRSMQFEAFSHYAKLWISPSSHCFVPC 389
G R+L+ Q SPY WN ++DLLG N LFD MW++V SM+ + A SS P
Sbjct: 95 GHRHLHHQHSPYSWNLVIDLLGKNRLFDPMWDTVGSMRAQGLLSLATFASIFSSLAANPT 154
Query: 390 VMPNSAF 410
P AF
Sbjct: 155 SSPLKAF 161
Score = 30.0 bits (66), Expect(2) = 4e-08
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +2
Query: 92 SSVDHSLDNAGVLISSQDAEALLKLSYSLSGVAVGFF 202
S V+ +LD+A V +++ D E +L+ SY+ A FF
Sbjct: 55 SDVEAALDDADVRVTTSDVEQVLRFSYAHPRGAAAFF 91
>ref|XP_003570219.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Brachypodium distachyon]
Length = 488
Score = 55.1 bits (131), Expect(2) = 5e-08
Identities = 29/67 (43%), Positives = 36/67 (53%)
Frame = +3
Query: 210 GIRYLNDQQSPYVWNFMVDLLGNNLLFDTMWNSVRSMQFEAFSHYAKLWISPSSHCFVPC 389
G R+L Q SPY WN ++DLLG N LFD MW++V SM+ + A SS P
Sbjct: 95 GHRHLRHQHSPYSWNLVIDLLGKNRLFDPMWDTVSSMRSQGLLSLASFASVFSSLAADPV 154
Query: 390 VMPNSAF 410
P AF
Sbjct: 155 SSPLKAF 161
Score = 29.3 bits (64), Expect(2) = 5e-08
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +2
Query: 92 SSVDHSLDNAGVLISSQDAEALLKLSYSLSGVAVGFF 202
+ V+ +LD+A V +++ D E +L+ SY+ A FF
Sbjct: 55 TDVEAALDDAAVRVTTSDVEQVLRFSYAHPRGAAAFF 91
>ref|XP_004953662.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial-like [Setaria italica]
Length = 490
Score = 49.3 bits (116), Expect(2) = 2e-06
Identities = 26/67 (38%), Positives = 35/67 (52%)
Frame = +3
Query: 210 GIRYLNDQQSPYVWNFMVDLLGNNLLFDTMWNSVRSMQFEAFSHYAKLWISPSSHCFVPC 389
G ++L + SPY WN +VD+LG N +F+ MW +VRSM + A SS P
Sbjct: 97 GHQHLGHEHSPYSWNLVVDILGKNRIFEPMWETVRSMHSQRLLSLATFASVFSSLAASPG 156
Query: 390 VMPNSAF 410
P AF
Sbjct: 157 GNPLKAF 163
Score = 29.3 bits (64), Expect(2) = 2e-06
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +2
Query: 68 IAVSNPNPSSVDHSLDNAGVLISSQDAEALLKLSYSLSGVAVGFF 202
I S + + VD L A + +++ D E +L+ SY+ A FF
Sbjct: 49 ILASASSAADVDDKLTKANIGVTTDDVEQVLRFSYAHPRAAAAFF 93
>gb|EAZ24364.1| hypothetical protein OsJ_08117 [Oryza sativa Japonica Group]
Length = 438
Score = 53.5 bits (127), Expect(2) = 2e-06
Identities = 29/67 (43%), Positives = 36/67 (53%)
Frame = +3
Query: 210 GIRYLNDQQSPYVWNFMVDLLGNNLLFDTMWNSVRSMQFEAFSHYAKLWISPSSHCFVPC 389
G R+L Q SPY WN +VDLLG N LF+ MW++V SM+ + A SS P
Sbjct: 96 GHRHLRHQHSPYSWNLVVDLLGKNRLFEPMWDTVSSMRTQGLLSLATFASVFSSLAANPA 155
Query: 390 VMPNSAF 410
P AF
Sbjct: 156 SSPLRAF 162
Score = 25.0 bits (53), Expect(2) = 2e-06
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 125 VLISSQDAEALLKLSYSLSGVAVGFF 202
V ++S D E +L+ SY+ AV FF
Sbjct: 67 VRVTSSDVEQVLRFSYAHPRAAVAFF 92
>ref|XP_003552963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Glycine max]
Length = 485
Score = 57.0 bits (136), Expect = 8e-06
Identities = 36/106 (33%), Positives = 54/106 (50%), Gaps = 12/106 (11%)
Frame = +3
Query: 48 QMMPSLRSPSLTLIHPPSITPSTTLASSSPHRMRRPCSSSLTPCQVSPLASFLGGI---- 215
Q +P+L S +L H +TT A+S H ++ + S+TP V + G
Sbjct: 33 QDIPNLPSNIKSLCH----LIATTSAASVEHSLQS-AAISVTPHDVEEVLKLSYGFPGQA 87
Query: 216 --------RYLNDQQSPYVWNFMVDLLGNNLLFDTMWNSVRSMQFE 329
R+LND +PY WN +VD+LG N FD MW++++SM E
Sbjct: 88 VKFFRWSGRHLNDNHTPYSWNLVVDILGKNRFFDAMWDAIKSMNKE 133