BLASTX nr result

ID: Zingiber25_contig00031052 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00031052
         (314 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXC01181.1| Agamous-like MADS-box protein AGL16 [Morus notabi...    42   6e-07
gb|EOY15523.1| AGAMOUS-like 16 [Theobroma cacao]                       44   4e-06

>gb|EXC01181.1| Agamous-like MADS-box protein AGL16 [Morus notabilis]
          Length = 183

 Score = 41.6 bits (96), Expect(3) = 6e-07
 Identities = 20/26 (76%), Positives = 24/26 (92%)
 Frame = +1

Query: 1   SGLSVKDLQNIESQLEISLCSVRMKK 78
           SGLSVKDLQN+E+QLE+SL  VR+KK
Sbjct: 33  SGLSVKDLQNLENQLEMSLHGVRIKK 58



 Score = 29.3 bits (64), Expect(3) = 6e-07
 Identities = 16/30 (53%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = +2

Query: 227 LTILYLIHPNTG-LSQGKLIQQDNIELYKK 313
           L +L     N G L QG LI Q+N+ELYKK
Sbjct: 92  LELLVFKELNIGVLVQGNLIHQENVELYKK 121



 Score = 27.3 bits (59), Expect(3) = 6e-07
 Identities = 11/16 (68%), Positives = 16/16 (100%)
 Frame = +3

Query: 150 QDQLLIEEIQELHRKV 197
           +DQ+L++EIQEL+RKV
Sbjct: 58  KDQILMQEIQELNRKV 73


>gb|EOY15523.1| AGAMOUS-like 16 [Theobroma cacao]
          Length = 184

 Score = 44.3 bits (103), Expect(3) = 4e-06
 Identities = 22/26 (84%), Positives = 24/26 (92%)
 Frame = +1

Query: 1   SGLSVKDLQNIESQLEISLCSVRMKK 78
           SGLSVKDLQN+ESQLE+SL  VRMKK
Sbjct: 116 SGLSVKDLQNLESQLEMSLRGVRMKK 141



 Score = 27.3 bits (59), Expect(3) = 4e-06
 Identities = 14/30 (46%), Positives = 22/30 (73%)
 Frame = +3

Query: 150 QDQLLIEEIQELHRKVVVYFTIHQ*GLQFY 239
           +DQ+L++EIQEL+RK  +   IHQ  ++ Y
Sbjct: 141 KDQILMDEIQELNRKGNL---IHQENVELY 167



 Score = 23.5 bits (49), Expect(3) = 4e-06
 Identities = 9/12 (75%), Positives = 12/12 (100%)
 Frame = +2

Query: 278 LIQQDNIELYKK 313
           LI+Q+N+ELYKK
Sbjct: 172 LIRQENMELYKK 183


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