BLASTX nr result
ID: Zingiber25_contig00030898
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00030898
(524 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002460941.1| hypothetical protein SORBIDRAFT_02g037890 [S... 70 6e-11
dbj|BAC20900.1| short-root protein-like [Oryza sativa Japonica G... 70 1e-10
ref|NP_001060133.1| Os07g0586900 [Oryza sativa Japonica Group] g... 70 1e-10
gb|EEE67495.1| hypothetical protein OsJ_24926 [Oryza sativa Japo... 70 1e-10
ref|XP_002467655.1| hypothetical protein SORBIDRAFT_01g031720 [S... 69 2e-10
tpg|DAA45910.1| TPA: hypothetical protein ZEAMMB73_781034 [Zea m... 69 2e-10
ref|XP_004958171.1| PREDICTED: protein SHORT-ROOT 1-like [Setari... 69 2e-10
tpg|DAA41268.1| TPA: hypothetical protein ZEAMMB73_913831 [Zea m... 69 2e-10
gb|EMS45550.1| hypothetical protein TRIUR3_26966 [Triticum urartu] 70 2e-10
dbj|BAK02177.1| predicted protein [Hordeum vulgare subsp. vulgare] 70 2e-10
ref|NP_001169599.1| hypothetical protein [Zea mays] gi|224030299... 70 2e-10
gb|ACN33432.1| unknown [Zea mays] 70 2e-10
ref|XP_003562791.1| PREDICTED: protein SHORT-ROOT 1-like [Brachy... 68 2e-10
ref|XP_004983931.1| PREDICTED: protein SHORT-ROOT 2-like [Setari... 69 4e-10
sp|A2XIA8.1|SHR2_ORYSI RecName: Full=Protein SHORT-ROOT 2; AltNa... 69 6e-10
ref|NP_001173487.1| Os03g0433200 [Oryza sativa Japonica Group] g... 69 6e-10
sp|A2YN56.1|SHR1_ORYSI RecName: Full=Protein SHORT-ROOT 1; AltNa... 67 1e-09
gb|ESW28704.1| hypothetical protein PHAVU_002G010700g [Phaseolus... 60 3e-07
ref|XP_003524693.1| PREDICTED: protein SHORT-ROOT-like [Glycine ... 60 3e-07
ref|XP_004511835.1| PREDICTED: protein SHORT-ROOT-like [Cicer ar... 60 4e-07
>ref|XP_002460941.1| hypothetical protein SORBIDRAFT_02g037890 [Sorghum bicolor]
gi|241924318|gb|EER97462.1| hypothetical protein
SORBIDRAFT_02g037890 [Sorghum bicolor]
Length = 598
Score = 70.5 bits (171), Expect(2) = 6e-11
Identities = 33/39 (84%), Positives = 35/39 (89%)
Frame = -2
Query: 121 LMWTLNELASPYGDGEQKLASFFLQGLFARATCAGPRTL 5
LMW LNELASPYGD EQKLAS+FLQGLFAR T +GPRTL
Sbjct: 214 LMWMLNELASPYGDVEQKLASYFLQGLFARLTASGPRTL 252
Score = 21.9 bits (45), Expect(2) = 6e-11
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = -1
Query: 176 ECARAMDSRDGRRAR 132
ECARA+ +RD +R +
Sbjct: 198 ECARAVAARDSQRVQ 212
>dbj|BAC20900.1| short-root protein-like [Oryza sativa Japonica Group]
gi|50509213|dbj|BAD30442.1| short-root protein-like
[Oryza sativa Japonica Group]
Length = 629
Score = 70.5 bits (171), Expect(2) = 1e-10
Identities = 33/39 (84%), Positives = 35/39 (89%)
Frame = -2
Query: 121 LMWTLNELASPYGDGEQKLASFFLQGLFARATCAGPRTL 5
LMW LNELASPYGD EQKLAS+FLQGLFAR T +GPRTL
Sbjct: 241 LMWMLNELASPYGDVEQKLASYFLQGLFARLTASGPRTL 279
Score = 20.8 bits (42), Expect(2) = 1e-10
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = -1
Query: 176 ECARAMDSRDGRRAR 132
ECAR++ +RD +R +
Sbjct: 225 ECARSVAARDSQRVQ 239
>ref|NP_001060133.1| Os07g0586900 [Oryza sativa Japonica Group]
gi|182691590|sp|Q8H2X8.2|SHR1_ORYSJ RecName:
Full=Protein SHORT-ROOT 1; AltName: Full=OsSHR1
gi|113611669|dbj|BAF22047.1| Os07g0586900 [Oryza sativa
Japonica Group] gi|215768016|dbj|BAH00245.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 602
Score = 70.5 bits (171), Expect(2) = 1e-10
Identities = 33/39 (84%), Positives = 35/39 (89%)
Frame = -2
Query: 121 LMWTLNELASPYGDGEQKLASFFLQGLFARATCAGPRTL 5
LMW LNELASPYGD EQKLAS+FLQGLFAR T +GPRTL
Sbjct: 214 LMWMLNELASPYGDVEQKLASYFLQGLFARLTASGPRTL 252
Score = 20.8 bits (42), Expect(2) = 1e-10
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = -1
Query: 176 ECARAMDSRDGRRAR 132
ECAR++ +RD +R +
Sbjct: 198 ECARSVAARDSQRVQ 212
>gb|EEE67495.1| hypothetical protein OsJ_24926 [Oryza sativa Japonica Group]
Length = 584
Score = 70.5 bits (171), Expect(2) = 1e-10
Identities = 33/39 (84%), Positives = 35/39 (89%)
Frame = -2
Query: 121 LMWTLNELASPYGDGEQKLASFFLQGLFARATCAGPRTL 5
LMW LNELASPYGD EQKLAS+FLQGLFAR T +GPRTL
Sbjct: 214 LMWMLNELASPYGDVEQKLASYFLQGLFARLTASGPRTL 252
Score = 20.8 bits (42), Expect(2) = 1e-10
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = -1
Query: 176 ECARAMDSRDGRRAR 132
ECAR++ +RD +R +
Sbjct: 198 ECARSVAARDSQRVQ 212
>ref|XP_002467655.1| hypothetical protein SORBIDRAFT_01g031720 [Sorghum bicolor]
gi|241921509|gb|EER94653.1| hypothetical protein
SORBIDRAFT_01g031720 [Sorghum bicolor]
Length = 664
Score = 68.9 bits (167), Expect(2) = 2e-10
Identities = 32/39 (82%), Positives = 35/39 (89%)
Frame = -2
Query: 121 LMWTLNELASPYGDGEQKLASFFLQGLFARATCAGPRTL 5
LMW LNELASPYGD +QKLAS+FLQGLFAR T +GPRTL
Sbjct: 259 LMWMLNELASPYGDVDQKLASYFLQGLFARLTTSGPRTL 297
Score = 21.9 bits (45), Expect(2) = 2e-10
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = -1
Query: 176 ECARAMDSRDGRRAR 132
ECARA+ +RD +R +
Sbjct: 243 ECARAVAARDSQRVQ 257
>tpg|DAA45910.1| TPA: hypothetical protein ZEAMMB73_781034 [Zea mays]
Length = 630
Score = 68.9 bits (167), Expect(2) = 2e-10
Identities = 32/39 (82%), Positives = 35/39 (89%)
Frame = -2
Query: 121 LMWTLNELASPYGDGEQKLASFFLQGLFARATCAGPRTL 5
LMW LNELASPYGD +QKLAS+FLQGLFAR T +GPRTL
Sbjct: 235 LMWMLNELASPYGDVDQKLASYFLQGLFARLTTSGPRTL 273
Score = 21.9 bits (45), Expect(2) = 2e-10
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = -1
Query: 176 ECARAMDSRDGRRAR 132
ECARA+ +RD +R +
Sbjct: 219 ECARAVAARDSQRVQ 233
>ref|XP_004958171.1| PREDICTED: protein SHORT-ROOT 1-like [Setaria italica]
Length = 594
Score = 68.9 bits (167), Expect(2) = 2e-10
Identities = 32/39 (82%), Positives = 35/39 (89%)
Frame = -2
Query: 121 LMWTLNELASPYGDGEQKLASFFLQGLFARATCAGPRTL 5
LMW LNELASPYG+ EQKLAS+FLQGLFAR T +GPRTL
Sbjct: 209 LMWMLNELASPYGEVEQKLASYFLQGLFARLTASGPRTL 247
Score = 21.9 bits (45), Expect(2) = 2e-10
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = -1
Query: 176 ECARAMDSRDGRRAR 132
ECARA+ +RD +R +
Sbjct: 193 ECARAVAARDSQRVQ 207
>tpg|DAA41268.1| TPA: hypothetical protein ZEAMMB73_913831 [Zea mays]
Length = 586
Score = 68.9 bits (167), Expect(2) = 2e-10
Identities = 32/39 (82%), Positives = 35/39 (89%)
Frame = -2
Query: 121 LMWTLNELASPYGDGEQKLASFFLQGLFARATCAGPRTL 5
LMW LNELASPYGD EQKLAS+FLQGLFAR T +GP+TL
Sbjct: 199 LMWMLNELASPYGDVEQKLASYFLQGLFARLTASGPQTL 237
Score = 21.9 bits (45), Expect(2) = 2e-10
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = -1
Query: 176 ECARAMDSRDGRRAR 132
ECARA+ +RD +R +
Sbjct: 183 ECARAVAARDSQRVQ 197
>gb|EMS45550.1| hypothetical protein TRIUR3_26966 [Triticum urartu]
Length = 135
Score = 70.5 bits (171), Expect = 2e-10
Identities = 33/39 (84%), Positives = 35/39 (89%)
Frame = -2
Query: 121 LMWTLNELASPYGDGEQKLASFFLQGLFARATCAGPRTL 5
LMW LNELASPYGD EQKLAS+FLQGLFAR T +GPRTL
Sbjct: 18 LMWMLNELASPYGDVEQKLASYFLQGLFARLTASGPRTL 56
>dbj|BAK02177.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 597
Score = 70.5 bits (171), Expect = 2e-10
Identities = 33/39 (84%), Positives = 35/39 (89%)
Frame = -2
Query: 121 LMWTLNELASPYGDGEQKLASFFLQGLFARATCAGPRTL 5
LMW LNELASPYGD EQKLAS+FLQGLFAR T +GPRTL
Sbjct: 213 LMWMLNELASPYGDVEQKLASYFLQGLFARLTASGPRTL 251
>ref|NP_001169599.1| hypothetical protein [Zea mays] gi|224030299|gb|ACN34225.1| unknown
[Zea mays] gi|414887363|tpg|DAA63377.1| TPA:
hypothetical protein ZEAMMB73_763916 [Zea mays]
Length = 592
Score = 70.5 bits (171), Expect = 2e-10
Identities = 33/39 (84%), Positives = 35/39 (89%)
Frame = -2
Query: 121 LMWTLNELASPYGDGEQKLASFFLQGLFARATCAGPRTL 5
LMW LNELASPYGD EQKLAS+FLQGLFAR T +GPRTL
Sbjct: 208 LMWMLNELASPYGDVEQKLASYFLQGLFARLTASGPRTL 246
>gb|ACN33432.1| unknown [Zea mays]
Length = 592
Score = 70.5 bits (171), Expect = 2e-10
Identities = 33/39 (84%), Positives = 35/39 (89%)
Frame = -2
Query: 121 LMWTLNELASPYGDGEQKLASFFLQGLFARATCAGPRTL 5
LMW LNELASPYGD EQKLAS+FLQGLFAR T +GPRTL
Sbjct: 208 LMWMLNELASPYGDVEQKLASYFLQGLFARLTASGPRTL 246
>ref|XP_003562791.1| PREDICTED: protein SHORT-ROOT 1-like [Brachypodium distachyon]
Length = 610
Score = 68.2 bits (165), Expect(2) = 2e-10
Identities = 32/39 (82%), Positives = 34/39 (87%)
Frame = -2
Query: 121 LMWTLNELASPYGDGEQKLASFFLQGLFARATCAGPRTL 5
LMW LNELASPYGD EQKLAS+FLQ LFAR T +GPRTL
Sbjct: 222 LMWMLNELASPYGDVEQKLASYFLQALFARLTASGPRTL 260
Score = 22.3 bits (46), Expect(2) = 2e-10
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -1
Query: 176 ECARAMDSRDGRRAR 132
ECARA+ SRD R +
Sbjct: 206 ECARAVASRDSTRVQ 220
>ref|XP_004983931.1| PREDICTED: protein SHORT-ROOT 2-like [Setaria italica]
Length = 635
Score = 68.9 bits (167), Expect(2) = 4e-10
Identities = 32/39 (82%), Positives = 35/39 (89%)
Frame = -2
Query: 121 LMWTLNELASPYGDGEQKLASFFLQGLFARATCAGPRTL 5
LMW LNELASPYGD +QKLAS+FLQGLFAR T +GPRTL
Sbjct: 244 LMWMLNELASPYGDVDQKLASYFLQGLFARLTTSGPRTL 282
Score = 20.8 bits (42), Expect(2) = 4e-10
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = -1
Query: 176 ECARAMDSRDGRRAR 132
+CARA+ +RD +R +
Sbjct: 228 QCARAVAARDSQRVQ 242
>sp|A2XIA8.1|SHR2_ORYSI RecName: Full=Protein SHORT-ROOT 2; AltName: Full=OsSHR2
gi|125544429|gb|EAY90568.1| hypothetical protein
OsI_12169 [Oryza sativa Indica Group]
Length = 603
Score = 68.9 bits (167), Expect = 6e-10
Identities = 32/39 (82%), Positives = 35/39 (89%)
Frame = -2
Query: 121 LMWTLNELASPYGDGEQKLASFFLQGLFARATCAGPRTL 5
LMW LNELASPYGD +QKLAS+FLQGLFAR T +GPRTL
Sbjct: 210 LMWMLNELASPYGDVDQKLASYFLQGLFARLTTSGPRTL 248
>ref|NP_001173487.1| Os03g0433200 [Oryza sativa Japonica Group]
gi|75137668|sp|Q75I13.1|SHR2_ORYSJ RecName: Full=Protein
SHORT-ROOT 2; AltName: Full=OsSHR2
gi|41469537|gb|AAS07303.1| putative GRAS family
transcription factor [Oryza sativa Japonica Group]
gi|108708985|gb|ABF96780.1| GRAS family transcription
factor containing protein, expressed [Oryza sativa
Japonica Group] gi|255674615|dbj|BAH92215.1|
Os03g0433200 [Oryza sativa Japonica Group]
Length = 603
Score = 68.9 bits (167), Expect = 6e-10
Identities = 32/39 (82%), Positives = 35/39 (89%)
Frame = -2
Query: 121 LMWTLNELASPYGDGEQKLASFFLQGLFARATCAGPRTL 5
LMW LNELASPYGD +QKLAS+FLQGLFAR T +GPRTL
Sbjct: 210 LMWMLNELASPYGDVDQKLASYFLQGLFARLTTSGPRTL 248
>sp|A2YN56.1|SHR1_ORYSI RecName: Full=Protein SHORT-ROOT 1; AltName: Full=OsSHR1
gi|125558981|gb|EAZ04517.1| hypothetical protein
OsI_26668 [Oryza sativa Indica Group]
Length = 602
Score = 67.4 bits (163), Expect(2) = 1e-09
Identities = 32/39 (82%), Positives = 34/39 (87%)
Frame = -2
Query: 121 LMWTLNELASPYGDGEQKLASFFLQGLFARATCAGPRTL 5
LMW LNELASPYGD EQKLAS+FLQGLFAR T +G RTL
Sbjct: 214 LMWMLNELASPYGDVEQKLASYFLQGLFARLTASGQRTL 252
Score = 20.8 bits (42), Expect(2) = 1e-09
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = -1
Query: 176 ECARAMDSRDGRRAR 132
ECAR++ +RD +R +
Sbjct: 198 ECARSVAARDSQRVQ 212
>gb|ESW28704.1| hypothetical protein PHAVU_002G010700g [Phaseolus vulgaris]
Length = 485
Score = 60.1 bits (144), Expect = 3e-07
Identities = 28/38 (73%), Positives = 31/38 (81%)
Frame = -2
Query: 121 LMWTLNELASPYGDGEQKLASFFLQGLFARATCAGPRT 8
LMW LNELASPYGD +QKLAS+FLQ F+R T AG RT
Sbjct: 132 LMWMLNELASPYGDTDQKLASYFLQAFFSRITQAGDRT 169
>ref|XP_003524693.1| PREDICTED: protein SHORT-ROOT-like [Glycine max]
Length = 499
Score = 60.1 bits (144), Expect = 3e-07
Identities = 27/40 (67%), Positives = 33/40 (82%)
Frame = -2
Query: 121 LMWTLNELASPYGDGEQKLASFFLQGLFARATCAGPRTLG 2
L+W LNEL+SPYGD +QKLA++FLQ LF+R T AG RT G
Sbjct: 145 LLWMLNELSSPYGDTDQKLAAYFLQALFSRVTEAGDRTYG 184
>ref|XP_004511835.1| PREDICTED: protein SHORT-ROOT-like [Cicer arietinum]
Length = 486
Score = 59.7 bits (143), Expect = 4e-07
Identities = 28/38 (73%), Positives = 32/38 (84%)
Frame = -2
Query: 121 LMWTLNELASPYGDGEQKLASFFLQGLFARATCAGPRT 8
LMW LNEL+SPYGD EQKL+S+FLQ LF+R T AG RT
Sbjct: 130 LMWMLNELSSPYGDTEQKLSSYFLQALFSRITEAGNRT 167