BLASTX nr result
ID: Zingiber25_contig00030872
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00030872
(259 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003536283.1| PREDICTED: pullulanase 1, chloroplastic-like... 88 1e-15
ref|XP_004496127.1| PREDICTED: pullulanase 1, chloroplastic-like... 86 5e-15
ref|XP_006485314.1| PREDICTED: pullulanase 1, chloroplastic-like... 86 7e-15
ref|XP_006485313.1| PREDICTED: pullulanase 1, chloroplastic-like... 86 7e-15
gb|ESW16231.1| hypothetical protein PHAVU_007G1394000g, partial ... 85 1e-14
ref|XP_004975057.1| PREDICTED: LOW QUALITY PROTEIN: pullulanase ... 84 3e-14
gb|AAO00771.1| pullulanase-like protein (starch debranching enzy... 83 4e-14
ref|NP_196056.2| pullulanase 1/limit dextrinase [Arabidopsis tha... 83 4e-14
gb|EMJ21470.1| hypothetical protein PRUPE_ppa000905mg [Prunus pe... 82 6e-14
ref|XP_002446086.1| hypothetical protein SORBIDRAFT_06g001540 [S... 82 6e-14
gb|EMS57285.1| Pullulanase 1, chloroplastic [Triticum urartu] 82 7e-14
ref|XP_006378784.1| hypothetical protein POPTR_0010s23600g [Popu... 82 1e-13
ref|XP_002315334.2| pullulanase family protein [Populus trichoca... 82 1e-13
ref|XP_006387017.1| hypothetical protein POPTR_2184s00010g [Popu... 82 1e-13
ref|XP_006287006.1| hypothetical protein CARUB_v10000153mg [Caps... 82 1e-13
ref|XP_003580925.1| PREDICTED: pullulanase 1, chloroplastic-like... 82 1e-13
gb|ABL84490.1| limit dextrinase type starch debranching enzyme [... 82 1e-13
gb|AAK52485.1|AF359460_1 pullulanase [Triticum aestivum] 82 1e-13
ref|XP_002871089.1| hypothetical protein ARALYDRAFT_487216 [Arab... 81 2e-13
pdb|4J3W|A Chain A, Crystal Structure Of Barley Limit Dextrinase... 80 2e-13
>ref|XP_003536283.1| PREDICTED: pullulanase 1, chloroplastic-like [Glycine max]
Length = 951
Score = 87.8 bits (216), Expect = 1e-15
Identities = 41/69 (59%), Positives = 54/69 (78%)
Frame = +1
Query: 1 YSLVVVLFNVCPAQVSLEIPALKSRTLQLHPLQLNSVDDVVKLSAYDASSGSFIIPRRTT 180
YS +VV+FN P +VS PAL+ R LQLHP+Q++S DD+VK S Y+ASSG F++PRRTT
Sbjct: 883 YSFIVVVFNASPKEVSFVSPALQLRNLQLHPIQVSSSDDLVKSSRYEASSGCFVVPRRTT 942
Query: 181 SLFVELRNT 207
++FVE R T
Sbjct: 943 AVFVEPRKT 951
>ref|XP_004496127.1| PREDICTED: pullulanase 1, chloroplastic-like isoform X1 [Cicer
arietinum]
Length = 953
Score = 85.9 bits (211), Expect = 5e-15
Identities = 41/67 (61%), Positives = 54/67 (80%)
Frame = +1
Query: 1 YSLVVVLFNVCPAQVSLEIPALKSRTLQLHPLQLNSVDDVVKLSAYDASSGSFIIPRRTT 180
YS VVV+FN P +VS P+L+SR+LQLHP+Q+ S DD+VK S Y++SSG FI+PRRTT
Sbjct: 885 YSFVVVVFNASPEEVSFVSPSLQSRSLQLHPIQVMSSDDLVKRSKYESSSGCFIVPRRTT 944
Query: 181 SLFVELR 201
++FVE R
Sbjct: 945 AVFVEPR 951
>ref|XP_006485314.1| PREDICTED: pullulanase 1, chloroplastic-like isoform X2 [Citrus
sinensis]
Length = 965
Score = 85.5 bits (210), Expect = 7e-15
Identities = 40/69 (57%), Positives = 54/69 (78%)
Frame = +1
Query: 1 YSLVVVLFNVCPAQVSLEIPALKSRTLQLHPLQLNSVDDVVKLSAYDASSGSFIIPRRTT 180
YS +VV+FN P +VS PAL+ + LQLHP+Q+ SVD++VK S+Y+A+SG F+IP RTT
Sbjct: 897 YSYIVVIFNSSPTEVSFVSPALQGKNLQLHPIQVKSVDEIVKNSSYEANSGCFVIPPRTT 956
Query: 181 SLFVELRNT 207
S+FVE R T
Sbjct: 957 SVFVEPRAT 965
>ref|XP_006485313.1| PREDICTED: pullulanase 1, chloroplastic-like isoform X1 [Citrus
sinensis]
Length = 969
Score = 85.5 bits (210), Expect = 7e-15
Identities = 40/69 (57%), Positives = 54/69 (78%)
Frame = +1
Query: 1 YSLVVVLFNVCPAQVSLEIPALKSRTLQLHPLQLNSVDDVVKLSAYDASSGSFIIPRRTT 180
YS +VV+FN P +VS PAL+ + LQLHP+Q+ SVD++VK S+Y+A+SG F+IP RTT
Sbjct: 901 YSYIVVIFNSSPTEVSFVSPALQGKNLQLHPIQVKSVDEIVKNSSYEANSGCFVIPPRTT 960
Query: 181 SLFVELRNT 207
S+FVE R T
Sbjct: 961 SVFVEPRAT 969
>gb|ESW16231.1| hypothetical protein PHAVU_007G1394000g, partial [Phaseolus
vulgaris]
Length = 601
Score = 84.7 bits (208), Expect = 1e-14
Identities = 39/69 (56%), Positives = 54/69 (78%)
Frame = +1
Query: 1 YSLVVVLFNVCPAQVSLEIPALKSRTLQLHPLQLNSVDDVVKLSAYDASSGSFIIPRRTT 180
YS +VV+ N P +VS PAL+SR+LQLHP+Q++S DD+VK S Y+ SSG F++P+RTT
Sbjct: 533 YSFIVVVVNASPKEVSFVSPALQSRSLQLHPIQVSSSDDLVKSSRYETSSGCFVVPQRTT 592
Query: 181 SLFVELRNT 207
++FVE R T
Sbjct: 593 AVFVEPRKT 601
>ref|XP_004975057.1| PREDICTED: LOW QUALITY PROTEIN: pullulanase 1, chloroplastic-like
[Setaria italica]
Length = 958
Score = 83.6 bits (205), Expect = 3e-14
Identities = 38/67 (56%), Positives = 53/67 (79%)
Frame = +1
Query: 1 YSLVVVLFNVCPAQVSLEIPALKSRTLQLHPLQLNSVDDVVKLSAYDASSGSFIIPRRTT 180
+S VV +FN CP +VS+EIP L + LQLHP+Q+NS D +V+ SAY+A++G F +PRRTT
Sbjct: 891 FSCVVTVFNACPHEVSIEIPDLATNKLQLHPVQVNSSDALVRQSAYEATTGQFTVPRRTT 950
Query: 181 SLFVELR 201
++FVE R
Sbjct: 951 AVFVEPR 957
>gb|AAO00771.1| pullulanase-like protein (starch debranching enzyme) [Arabidopsis
thaliana]
Length = 965
Score = 82.8 bits (203), Expect = 4e-14
Identities = 38/68 (55%), Positives = 51/68 (75%)
Frame = +1
Query: 1 YSLVVVLFNVCPAQVSLEIPALKSRTLQLHPLQLNSVDDVVKLSAYDASSGSFIIPRRTT 180
YSL+VV+FN P++ S PALK R L+LHP+Q+ S D++VK S YD+ SG F +P RTT
Sbjct: 897 YSLIVVIFNARPSEFSYPSPALKDRKLELHPVQVMSADEIVKKSVYDSFSGGFTVPARTT 956
Query: 181 SLFVELRN 204
++FVE RN
Sbjct: 957 TVFVESRN 964
>ref|NP_196056.2| pullulanase 1/limit dextrinase [Arabidopsis thaliana]
gi|332278143|sp|Q8GTR4.2|PULA1_ARATH RecName:
Full=Pullulanase 1, chloroplastic; Short=AtPU1; AltName:
Full=Protein LIMIT DEXTRINASE; Short=AtLDA; Flags:
Precursor gi|332003349|gb|AED90732.1| pullulanase 1/limit
dextrinase [Arabidopsis thaliana]
Length = 965
Score = 82.8 bits (203), Expect = 4e-14
Identities = 38/68 (55%), Positives = 51/68 (75%)
Frame = +1
Query: 1 YSLVVVLFNVCPAQVSLEIPALKSRTLQLHPLQLNSVDDVVKLSAYDASSGSFIIPRRTT 180
YSL+VV+FN P++ S PALK R L+LHP+Q+ S D++VK S YD+ SG F +P RTT
Sbjct: 897 YSLIVVIFNARPSEFSYPSPALKDRKLELHPVQVMSADEIVKKSVYDSFSGGFTVPARTT 956
Query: 181 SLFVELRN 204
++FVE RN
Sbjct: 957 TVFVESRN 964
>gb|EMJ21470.1| hypothetical protein PRUPE_ppa000905mg [Prunus persica]
Length = 965
Score = 82.4 bits (202), Expect = 6e-14
Identities = 38/67 (56%), Positives = 51/67 (76%)
Frame = +1
Query: 1 YSLVVVLFNVCPAQVSLEIPALKSRTLQLHPLQLNSVDDVVKLSAYDASSGSFIIPRRTT 180
YS +VV+ N CP +VS P+L++RTLQLHP Q+ S D++VK S Y+AS+G F +P RTT
Sbjct: 897 YSYIVVIVNACPTEVSFASPSLQARTLQLHPEQVMSTDEIVKRSTYNASAGCFTVPPRTT 956
Query: 181 SLFVELR 201
S+FVE R
Sbjct: 957 SVFVEPR 963
>ref|XP_002446086.1| hypothetical protein SORBIDRAFT_06g001540 [Sorghum bicolor]
gi|241937269|gb|EES10414.1| hypothetical protein
SORBIDRAFT_06g001540 [Sorghum bicolor]
Length = 966
Score = 82.4 bits (202), Expect = 6e-14
Identities = 38/67 (56%), Positives = 54/67 (80%)
Frame = +1
Query: 1 YSLVVVLFNVCPAQVSLEIPALKSRTLQLHPLQLNSVDDVVKLSAYDASSGSFIIPRRTT 180
+S VV +FNVCP +V++EIP L S LQLHP+Q+NS D +V+ SAY+A++G F +P+RTT
Sbjct: 899 FSCVVTVFNVCPHEVTIEIPDLASLGLQLHPVQVNSSDALVRQSAYEATTGRFTVPKRTT 958
Query: 181 SLFVELR 201
++FVE R
Sbjct: 959 AVFVEPR 965
>gb|EMS57285.1| Pullulanase 1, chloroplastic [Triticum urartu]
Length = 866
Score = 82.0 bits (201), Expect = 7e-14
Identities = 38/67 (56%), Positives = 52/67 (77%)
Frame = +1
Query: 1 YSLVVVLFNVCPAQVSLEIPALKSRTLQLHPLQLNSVDDVVKLSAYDASSGSFIIPRRTT 180
+S VV +FNVCP +VS++IPAL S L+LHP+Q+NS D +V S Y+A++G F +PRRT
Sbjct: 799 FSYVVTIFNVCPHEVSMDIPALASMGLELHPVQVNSSDALVGKSVYEAATGRFTVPRRTV 858
Query: 181 SLFVELR 201
S+FVE R
Sbjct: 859 SIFVEPR 865
>ref|XP_006378784.1| hypothetical protein POPTR_0010s23600g [Populus trichocarpa]
gi|550330451|gb|ERP56581.1| hypothetical protein
POPTR_0010s23600g [Populus trichocarpa]
Length = 945
Score = 81.6 bits (200), Expect = 1e-13
Identities = 37/67 (55%), Positives = 50/67 (74%)
Frame = +1
Query: 1 YSLVVVLFNVCPAQVSLEIPALKSRTLQLHPLQLNSVDDVVKLSAYDASSGSFIIPRRTT 180
YS +VV+FN P++VS P L++RT QLHP+Q S D+VVK S+Y+ S+G F +P RTT
Sbjct: 875 YSFIVVIFNASPSEVSFASPVLRARTFQLHPIQAMSTDEVVKNSSYETSTGCFTVPPRTT 934
Query: 181 SLFVELR 201
S+FVE R
Sbjct: 935 SVFVEYR 941
>ref|XP_002315334.2| pullulanase family protein [Populus trichocarpa]
gi|550330450|gb|EEF01505.2| pullulanase family protein
[Populus trichocarpa]
Length = 943
Score = 81.6 bits (200), Expect = 1e-13
Identities = 37/67 (55%), Positives = 50/67 (74%)
Frame = +1
Query: 1 YSLVVVLFNVCPAQVSLEIPALKSRTLQLHPLQLNSVDDVVKLSAYDASSGSFIIPRRTT 180
YS +VV+FN P++VS P L++RT QLHP+Q S D+VVK S+Y+ S+G F +P RTT
Sbjct: 873 YSFIVVIFNASPSEVSFASPVLRARTFQLHPIQAMSTDEVVKNSSYETSTGCFTVPPRTT 932
Query: 181 SLFVELR 201
S+FVE R
Sbjct: 933 SVFVEYR 939
>ref|XP_006387017.1| hypothetical protein POPTR_2184s00010g [Populus trichocarpa]
gi|550304152|gb|ERP45931.1| hypothetical protein
POPTR_2184s00010g [Populus trichocarpa]
Length = 86
Score = 81.6 bits (200), Expect = 1e-13
Identities = 37/67 (55%), Positives = 50/67 (74%)
Frame = +1
Query: 1 YSLVVVLFNVCPAQVSLEIPALKSRTLQLHPLQLNSVDDVVKLSAYDASSGSFIIPRRTT 180
YS +VV+FN P++VS P L++RT QLHP+Q S D+VVK S+Y+ S+G F +P RTT
Sbjct: 20 YSFIVVIFNASPSEVSFASPVLRARTFQLHPIQAMSTDEVVKNSSYETSTGCFTVPPRTT 79
Query: 181 SLFVELR 201
S+FVE R
Sbjct: 80 SVFVEYR 86
>ref|XP_006287006.1| hypothetical protein CARUB_v10000153mg [Capsella rubella]
gi|482555712|gb|EOA19904.1| hypothetical protein
CARUB_v10000153mg [Capsella rubella]
Length = 964
Score = 81.6 bits (200), Expect = 1e-13
Identities = 39/68 (57%), Positives = 51/68 (75%)
Frame = +1
Query: 1 YSLVVVLFNVCPAQVSLEIPALKSRTLQLHPLQLNSVDDVVKLSAYDASSGSFIIPRRTT 180
YSL+VV+FN P++ S PALK R L+LHP+Q+ S D+ VK S Y+A SGSF +P RTT
Sbjct: 896 YSLIVVIFNARPSEFSFLSPALKDRNLELHPVQVMSGDETVKKSVYEAFSGSFTVPARTT 955
Query: 181 SLFVELRN 204
++FVE RN
Sbjct: 956 AVFVESRN 963
>ref|XP_003580925.1| PREDICTED: pullulanase 1, chloroplastic-like [Brachypodium
distachyon]
Length = 970
Score = 81.6 bits (200), Expect = 1e-13
Identities = 38/67 (56%), Positives = 51/67 (76%)
Frame = +1
Query: 1 YSLVVVLFNVCPAQVSLEIPALKSRTLQLHPLQLNSVDDVVKLSAYDASSGSFIIPRRTT 180
+S VV +FNVCP +VS++IPAL S L+LHP+Q NS D +V+ S+Y+A G F +PRRT
Sbjct: 903 FSSVVTVFNVCPDEVSMDIPALASMGLELHPVQANSCDALVRQSSYEAGKGRFTVPRRTA 962
Query: 181 SLFVELR 201
S+FVE R
Sbjct: 963 SVFVEPR 969
>gb|ABL84490.1| limit dextrinase type starch debranching enzyme [Triticum aestivum]
Length = 963
Score = 81.6 bits (200), Expect = 1e-13
Identities = 38/67 (56%), Positives = 52/67 (77%)
Frame = +1
Query: 1 YSLVVVLFNVCPAQVSLEIPALKSRTLQLHPLQLNSVDDVVKLSAYDASSGSFIIPRRTT 180
+S VV +FNVCP +VS++IPAL S L+LHP+Q+NS D +V S Y+A++G F +PRRT
Sbjct: 896 FSYVVTVFNVCPHEVSMDIPALASMRLELHPVQVNSSDALVGKSVYEAATGRFTVPRRTV 955
Query: 181 SLFVELR 201
S+FVE R
Sbjct: 956 SVFVEPR 962
>gb|AAK52485.1|AF359460_1 pullulanase [Triticum aestivum]
Length = 414
Score = 81.6 bits (200), Expect = 1e-13
Identities = 38/67 (56%), Positives = 52/67 (77%)
Frame = +1
Query: 1 YSLVVVLFNVCPAQVSLEIPALKSRTLQLHPLQLNSVDDVVKLSAYDASSGSFIIPRRTT 180
+S VV +FNVCP +VS++IPAL S L+LHP+Q+NS D +V S Y+A++G F +PRRT
Sbjct: 347 FSYVVTVFNVCPHEVSMDIPALASMRLELHPVQVNSSDALVGKSVYEAATGRFTVPRRTV 406
Query: 181 SLFVELR 201
S+FVE R
Sbjct: 407 SVFVEPR 413
>ref|XP_002871089.1| hypothetical protein ARALYDRAFT_487216 [Arabidopsis lyrata subsp.
lyrata] gi|297316926|gb|EFH47348.1| hypothetical protein
ARALYDRAFT_487216 [Arabidopsis lyrata subsp. lyrata]
Length = 964
Score = 80.9 bits (198), Expect = 2e-13
Identities = 38/68 (55%), Positives = 51/68 (75%)
Frame = +1
Query: 1 YSLVVVLFNVCPAQVSLEIPALKSRTLQLHPLQLNSVDDVVKLSAYDASSGSFIIPRRTT 180
YSL+VV+FN P++ S PALK R L+LHP+Q+ S D++VK S YD+ SG F +P RTT
Sbjct: 896 YSLIVVIFNARPSEFSYLSPALKDRKLELHPVQVMSGDEIVKKSVYDSFSGGFTVPARTT 955
Query: 181 SLFVELRN 204
++FVE RN
Sbjct: 956 TVFVESRN 963
>pdb|4J3W|A Chain A, Crystal Structure Of Barley Limit Dextrinase (e510a Mutant)
In Complex With A Branched Maltohexasaccharide
gi|584579735|pdb|4J3X|A Chain A, Crystal Structure Of
Barley Limit Dextrinase (e510a Mutant) In Complex With A
Branched Maltoheptasaccharide
Length = 905
Score = 80.5 bits (197), Expect = 2e-13
Identities = 37/67 (55%), Positives = 52/67 (77%)
Frame = +1
Query: 1 YSLVVVLFNVCPAQVSLEIPALKSRTLQLHPLQLNSVDDVVKLSAYDASSGSFIIPRRTT 180
+S VV +FNVCP +VS++IPAL S +LHP+Q+NS D +V+ SAY+A++G F +P RT
Sbjct: 838 FSYVVTVFNVCPHEVSMDIPALASMGFELHPVQVNSSDTLVRKSAYEAATGRFTVPGRTV 897
Query: 181 SLFVELR 201
S+FVE R
Sbjct: 898 SVFVEPR 904