BLASTX nr result
ID: Zingiber25_contig00030645
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00030645
(495 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EEE53628.1| hypothetical protein OsJ_36905 [Oryza sativa Japo... 54 4e-09
gb|EEC69695.1| hypothetical protein OsI_39158 [Oryza sativa Indi... 54 9e-09
gb|EMS64211.1| Ubiquitin carboxyl-terminal hydrolase 8 [Triticum... 46 9e-08
gb|EMT01914.1| Ubiquitin carboxyl-terminal hydrolase 8 [Aegilops... 44 9e-08
dbj|BAJ95111.1| predicted protein [Hordeum vulgare subsp. vulgare] 45 1e-07
ref|XP_003577253.1| PREDICTED: ubiquitin carboxyl-terminal hydro... 44 2e-07
ref|NP_001067298.2| Os12g0621000 [Oryza sativa Japonica Group] g... 48 3e-07
ref|XP_004963176.1| PREDICTED: ubiquitin carboxyl-terminal hydro... 49 6e-07
>gb|EEE53628.1| hypothetical protein OsJ_36905 [Oryza sativa Japonica Group]
Length = 882
Score = 54.3 bits (129), Expect(2) = 4e-09
Identities = 29/80 (36%), Positives = 47/80 (58%)
Frame = -1
Query: 273 QCHFTDETSKIMQSKLEMDEPVPLPTTSKYLFVLVLAEQNVVTI*H*SSEQS*PEIYEFC 94
Q +F +E + K+EMD+P+ L + K L V+V + N + + SS + PEIY+
Sbjct: 644 QFYFINERFPDQRMKIEMDQPIRLTASQKRLHVVVCWQDNGLEQYNFSSLDNLPEIYKAV 703
Query: 93 VFLIRSQHSCTLYPCFKAFL 34
+F R Q +C+LY C +AF+
Sbjct: 704 LFSRRPQETCSLYACLEAFI 723
Score = 32.0 bits (71), Expect(2) = 4e-09
Identities = 18/57 (31%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Frame = -2
Query: 494 VTTLPDVVDGSTTIHKLFLRLLISFRKNKD--AGLDDEEDRCTSISLETNLNMETEA 330
V++LPD ++GS TI +L+ +++ FR KD +G D + + + T+++M ++A
Sbjct: 567 VSSLPDTINGS-TIFELYQKVMTPFRVPKDDSSGADHIIGKSSPVEETTDVDMNSDA 622
>gb|EEC69695.1| hypothetical protein OsI_39158 [Oryza sativa Indica Group]
Length = 868
Score = 54.3 bits (129), Expect(2) = 9e-09
Identities = 29/80 (36%), Positives = 47/80 (58%)
Frame = -1
Query: 273 QCHFTDETSKIMQSKLEMDEPVPLPTTSKYLFVLVLAEQNVVTI*H*SSEQS*PEIYEFC 94
Q +F +E + K+EMD+P+ L + K L V+V + N + + SS + PEIY+
Sbjct: 630 QFYFINERFPDQRMKIEMDQPIRLTASQKRLHVVVCWQDNGLEQYNFSSLDNLPEIYKAV 689
Query: 93 VFLIRSQHSCTLYPCFKAFL 34
+F R Q +C+LY C +AF+
Sbjct: 690 LFSRRPQETCSLYACLEAFI 709
Score = 30.8 bits (68), Expect(2) = 9e-09
Identities = 17/57 (29%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Frame = -2
Query: 494 VTTLPDVVDGSTTIHKLFLRLLISFRKNKDAGLDDEE--DRCTSISLETNLNMETEA 330
V++LPD ++GS TI +L+ +++ FR KD D + + + + T+++M ++A
Sbjct: 553 VSSLPDTINGS-TIFELYQKVMTPFRVPKDDSSDADHIIGKSSPVEETTDVDMNSDA 608
>gb|EMS64211.1| Ubiquitin carboxyl-terminal hydrolase 8 [Triticum urartu]
Length = 1015
Score = 45.8 bits (107), Expect(2) = 9e-08
Identities = 24/66 (36%), Positives = 37/66 (56%)
Frame = -1
Query: 231 KLEMDEPVPLPTTSKYLFVLVLAEQNVVTI*H*SSEQS*PEIYEFCVFLIRSQHSCTLYP 52
K+EMD+ + L K L V V + N + + S S PE+Y+ +F R Q +C+LY
Sbjct: 530 KIEMDQTITLSNLQKRLIVSVSWQDNGLKQYNLDSLDSLPEVYKTVLFTRRPQETCSLYA 589
Query: 51 CFKAFL 34
C +AF+
Sbjct: 590 CLEAFI 595
Score = 35.8 bits (81), Expect(2) = 9e-08
Identities = 21/61 (34%), Positives = 39/61 (63%), Gaps = 2/61 (3%)
Frame = -2
Query: 494 VTTLPDVVDGSTTIHKLFLRLLISFRKNKDAGLDDEE--DRCTSISLETNLNMETEAESE 321
V+ LPD +DG TI+ L L+ L FR+ KD LD ++ + + ++ ++++M ++A +E
Sbjct: 439 VSNLPDTIDG-RTIYNLLLKALTPFREPKDDVLDADQITGKSSPVNETSDIDMSSDA-AE 496
Query: 320 C 318
C
Sbjct: 497 C 497
>gb|EMT01914.1| Ubiquitin carboxyl-terminal hydrolase 8 [Aegilops tauschii]
Length = 925
Score = 43.9 bits (102), Expect(2) = 9e-08
Identities = 23/66 (34%), Positives = 36/66 (54%)
Frame = -1
Query: 231 KLEMDEPVPLPTTSKYLFVLVLAEQNVVTI*H*SSEQS*PEIYEFCVFLIRSQHSCTLYP 52
K+EMD+ + L K L V V + N + + S PE+Y+ +F R Q +C+LY
Sbjct: 604 KIEMDQTITLSNLQKRLIVSVSWQDNGLKQYNLDPLDSLPEVYKTVLFTRRPQETCSLYA 663
Query: 51 CFKAFL 34
C +AF+
Sbjct: 664 CLEAFI 669
Score = 37.7 bits (86), Expect(2) = 9e-08
Identities = 22/61 (36%), Positives = 40/61 (65%), Gaps = 2/61 (3%)
Frame = -2
Query: 494 VTTLPDVVDGSTTIHKLFLRLLISFRKNKDAGLDDEE--DRCTSISLETNLNMETEAESE 321
V+ LPD +DG TI+ L L+ L FR+ KD LD ++ + +S++ ++++M ++A +E
Sbjct: 513 VSNLPDTIDG-RTIYNLLLKALTPFREPKDDVLDADQITGKSSSVNETSDIDMSSDA-AE 570
Query: 320 C 318
C
Sbjct: 571 C 571
>dbj|BAJ95111.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 722
Score = 44.7 bits (104), Expect(2) = 1e-07
Identities = 23/66 (34%), Positives = 37/66 (56%)
Frame = -1
Query: 231 KLEMDEPVPLPTTSKYLFVLVLAEQNVVTI*H*SSEQS*PEIYEFCVFLIRSQHSCTLYP 52
K+EMD+ + L K L V V + N + + S S PE+Y+ +F + Q +C+LY
Sbjct: 552 KIEMDQTITLSNLQKRLIVSVSWQDNGLKQYNLDSLDSLPEVYKTVLFTRKPQETCSLYA 611
Query: 51 CFKAFL 34
C +AF+
Sbjct: 612 CLEAFI 617
Score = 36.6 bits (83), Expect(2) = 1e-07
Identities = 21/61 (34%), Positives = 39/61 (63%), Gaps = 2/61 (3%)
Frame = -2
Query: 494 VTTLPDVVDGSTTIHKLFLRLLISFRKNKDAGLDDEE--DRCTSISLETNLNMETEAESE 321
V+ LPD +DG TI+ L L+ L FR +KD LD ++ + + ++ ++++M ++A +E
Sbjct: 461 VSNLPDTIDG-RTIYNLLLKALTPFRVSKDDALDADQITGKSSPVNETSDVDMSSDA-AE 518
Query: 320 C 318
C
Sbjct: 519 C 519
>ref|XP_003577253.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like
[Brachypodium distachyon]
Length = 879
Score = 43.9 bits (102), Expect(2) = 2e-07
Identities = 27/96 (28%), Positives = 50/96 (52%)
Frame = -1
Query: 321 MHASR*KESLVLGVKFQCHFTDETSKIMQSKLEMDEPVPLPTTSKYLFVLVLAEQNVVTI 142
+H + +++++ + + +E K+EMD+ V P K L V+V + + +
Sbjct: 627 IHNNAGEDAIMTDTAMEFYLNNERFPDQHFKIEMDQVVT-PGLRKRLHVIVCWQDDGLKQ 685
Query: 141 *H*SSEQS*PEIYEFCVFLIRSQHSCTLYPCFKAFL 34
+ S S PEIY+ +F R Q +C+LY C +AF+
Sbjct: 686 YNLDSLDSLPEIYKSVLFARRPQETCSLYACLEAFI 721
Score = 36.6 bits (83), Expect(2) = 2e-07
Identities = 21/60 (35%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Frame = -2
Query: 494 VTTLPDVVDGSTTIHKLFLRLLISFRKNKDAGLDDEEDRCTSISLETNLNMET-EAESEC 318
V++LP ++G T I+ LFL+LL+ FR +KD D ++ C S ++ +M+ +EC
Sbjct: 566 VSSLPGTINGHT-IYNLFLQLLVPFRVSKDDIADADQINCKSSAVNGIADMDMGSGAAEC 624
>ref|NP_001067298.2| Os12g0621000 [Oryza sativa Japonica Group]
gi|255670491|dbj|BAF30317.2| Os12g0621000 [Oryza sativa
Japonica Group]
Length = 864
Score = 47.8 bits (112), Expect(2) = 3e-07
Identities = 28/80 (35%), Positives = 45/80 (56%)
Frame = -1
Query: 273 QCHFTDETSKIMQSKLEMDEPVPLPTTSKYLFVLVLAEQNVVTI*H*SSEQS*PEIYEFC 94
Q +F +E + K+EMD+P+ L + K L V+ N + + SS + PEIY+
Sbjct: 630 QFYFINERFPDQRMKIEMDQPIRLTASQKRLHVV----DNGLEQYNFSSLDNLPEIYKAV 685
Query: 93 VFLIRSQHSCTLYPCFKAFL 34
+F R Q +C+LY C +AF+
Sbjct: 686 LFSRRPQETCSLYACLEAFI 705
Score = 32.0 bits (71), Expect(2) = 3e-07
Identities = 18/57 (31%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Frame = -2
Query: 494 VTTLPDVVDGSTTIHKLFLRLLISFRKNKD--AGLDDEEDRCTSISLETNLNMETEA 330
V++LPD ++GS TI +L+ +++ FR KD +G D + + + T+++M ++A
Sbjct: 553 VSSLPDTINGS-TIFELYQKVMTPFRVPKDDSSGADHIIGKSSPVEETTDVDMNSDA 608
>ref|XP_004963176.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Setaria
italica]
Length = 912
Score = 49.3 bits (116), Expect(2) = 6e-07
Identities = 27/80 (33%), Positives = 44/80 (55%)
Frame = -1
Query: 273 QCHFTDETSKIMQSKLEMDEPVPLPTTSKYLFVLVLAEQNVVTI*H*SSEQS*PEIYEFC 94
Q T+E + K+EMD+P+ + K L V V + N + + +S S PE+Y+
Sbjct: 678 QFFLTNERFPDQRMKIEMDQPITVKGPQKRLHVAVCWQDNGLEQYNLASLDSLPEVYKAV 737
Query: 93 VFLIRSQHSCTLYPCFKAFL 34
+F R Q +C+LY C +AF+
Sbjct: 738 LFSRRPQDTCSLYACLEAFI 757
Score = 29.6 bits (65), Expect(2) = 6e-07
Identities = 22/53 (41%), Positives = 31/53 (58%)
Frame = -2
Query: 494 VTTLPDVVDGSTTIHKLFLRLLISFRKNKDAGLDDEEDRCTSISLETNLNMET 336
V++LPD V GS TI LFL+++ FR + +D D +I E+NL ET
Sbjct: 601 VSSLPDTVTGS-TISNLFLKVMTPFRVSN----NDVSDADQTIG-ESNLANET 647