BLASTX nr result
ID: Zingiber25_contig00030456
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00030456
(344 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI38961.3| unnamed protein product [Vitis vinifera] 115 6e-24
ref|XP_006453734.1| hypothetical protein CICLE_v10008517mg [Citr... 114 2e-23
ref|XP_006453733.1| hypothetical protein CICLE_v10008517mg [Citr... 114 2e-23
ref|XP_006473928.1| PREDICTED: zinc finger CCCH domain-containin... 112 5e-23
ref|XP_006473927.1| PREDICTED: zinc finger CCCH domain-containin... 112 5e-23
ref|XP_002514479.1| nucleic acid binding protein, putative [Rici... 111 1e-22
ref|XP_002274515.2| PREDICTED: zinc finger CCCH domain-containin... 110 1e-22
ref|XP_006345234.1| PREDICTED: zinc finger CCCH domain-containin... 110 3e-22
ref|XP_004251711.1| PREDICTED: zinc finger CCCH domain-containin... 110 3e-22
ref|XP_004157135.1| PREDICTED: zinc finger CCCH domain-containin... 109 3e-22
ref|XP_004139162.1| PREDICTED: zinc finger CCCH domain-containin... 109 4e-22
dbj|BAO49736.1| nuclear pore complex protein CG1a [Nicotiana ben... 107 2e-21
dbj|BAO49737.1| nuclear pore complex protein CG1b [Nicotiana ben... 106 3e-21
ref|XP_006390319.1| hypothetical protein EUTSA_v10018711mg [Eutr... 104 1e-20
ref|XP_003563526.1| PREDICTED: zinc finger CCCH domain-containin... 103 2e-20
gb|EOY32217.1| Zinc finger C-x8-C-x5-C-x3-H type family protein,... 102 5e-20
gb|EOY32216.1| Zinc finger C-x8-C-x5-C-x3-H type family protein,... 102 5e-20
gb|EOY32215.1| Zinc finger C-x8-C-x5-C-x3-H type family protein,... 102 5e-20
gb|EOY32214.1| Zinc finger C-x8-C-x5-C-x3-H type family protein,... 102 5e-20
gb|EOY32212.1| Zinc finger C-x8-C-x5-C-x3-H type family protein,... 102 5e-20
>emb|CBI38961.3| unnamed protein product [Vitis vinifera]
Length = 394
Score = 115 bits (288), Expect = 6e-24
Identities = 58/108 (53%), Positives = 73/108 (67%), Gaps = 2/108 (1%)
Frame = -1
Query: 320 NPYGFGVQNKPQLQNNTPQKGSSNFVAKYQTPAKPFENKWTRSS--SSGXXXXXXXXXXX 147
NP+GFGVQ+ N+ KG+S+F +K Q KPFENKWTR S ++G
Sbjct: 56 NPFGFGVQS------NSLPKGTSDFGSK-QNHFKPFENKWTRFSPLTTGSSSSSSRQSDN 108
Query: 146 XXXXSDHKCTDPESCKKQIIEDFKNEAPLWKLTCYGHRKYGPCDIVGD 3
++HKCTDPESCK+QI+EDF++E P+WKLTCYGH K PCDIVGD
Sbjct: 109 QVQPANHKCTDPESCKRQIVEDFEHERPIWKLTCYGHCKSAPCDIVGD 156
>ref|XP_006453734.1| hypothetical protein CICLE_v10008517mg [Citrus clementina]
gi|557556960|gb|ESR66974.1| hypothetical protein
CICLE_v10008517mg [Citrus clementina]
Length = 399
Score = 114 bits (284), Expect = 2e-23
Identities = 57/109 (52%), Positives = 69/109 (63%), Gaps = 2/109 (1%)
Frame = -1
Query: 323 PNPYGFGVQNKPQLQNNTPQKGSSNF-VAKYQTPAKPFENKWTRSSS-SGXXXXXXXXXX 150
PNP+GFGVQN PQ KG++N+ Q +KPFENKWTR S +G
Sbjct: 53 PNPFGFGVQNNPQ------SKGTNNYNFGNKQNQSKPFENKWTRFSPITGGGVPASRQPD 106
Query: 149 XXXXXSDHKCTDPESCKKQIIEDFKNEAPLWKLTCYGHRKYGPCDIVGD 3
++HKC+DP+SCK+ I EDF+ E PLWKLTCYGH K PCDIVGD
Sbjct: 107 NQPQSANHKCSDPDSCKRIIAEDFELERPLWKLTCYGHWKNAPCDIVGD 155
>ref|XP_006453733.1| hypothetical protein CICLE_v10008517mg [Citrus clementina]
gi|557556959|gb|ESR66973.1| hypothetical protein
CICLE_v10008517mg [Citrus clementina]
Length = 380
Score = 114 bits (284), Expect = 2e-23
Identities = 57/109 (52%), Positives = 69/109 (63%), Gaps = 2/109 (1%)
Frame = -1
Query: 323 PNPYGFGVQNKPQLQNNTPQKGSSNF-VAKYQTPAKPFENKWTRSSS-SGXXXXXXXXXX 150
PNP+GFGVQN PQ KG++N+ Q +KPFENKWTR S +G
Sbjct: 34 PNPFGFGVQNNPQ------SKGTNNYNFGNKQNQSKPFENKWTRFSPITGGGVPASRQPD 87
Query: 149 XXXXXSDHKCTDPESCKKQIIEDFKNEAPLWKLTCYGHRKYGPCDIVGD 3
++HKC+DP+SCK+ I EDF+ E PLWKLTCYGH K PCDIVGD
Sbjct: 88 NQPQSANHKCSDPDSCKRIIAEDFELERPLWKLTCYGHWKNAPCDIVGD 136
>ref|XP_006473928.1| PREDICTED: zinc finger CCCH domain-containing protein 16-like
isoform X2 [Citrus sinensis]
Length = 379
Score = 112 bits (280), Expect = 5e-23
Identities = 56/109 (51%), Positives = 68/109 (62%), Gaps = 2/109 (1%)
Frame = -1
Query: 323 PNPYGFGVQNKPQLQNNTPQKGSSNF-VAKYQTPAKPFENKWTRSSS-SGXXXXXXXXXX 150
PNP+GFGVQN PQ KG++N+ Q +KPFENKWTR S +G
Sbjct: 34 PNPFGFGVQNNPQ------SKGTNNYNFGNKQNQSKPFENKWTRFSPITGGGVPASRQPD 87
Query: 149 XXXXXSDHKCTDPESCKKQIIEDFKNEAPLWKLTCYGHRKYGPCDIVGD 3
++HKC+DP+SCK+ I EDF+ E PLWK TCYGH K PCDIVGD
Sbjct: 88 NQPLSANHKCSDPDSCKRIIAEDFELERPLWKFTCYGHWKNAPCDIVGD 136
>ref|XP_006473927.1| PREDICTED: zinc finger CCCH domain-containing protein 16-like
isoform X1 [Citrus sinensis]
Length = 380
Score = 112 bits (280), Expect = 5e-23
Identities = 56/109 (51%), Positives = 68/109 (62%), Gaps = 2/109 (1%)
Frame = -1
Query: 323 PNPYGFGVQNKPQLQNNTPQKGSSNF-VAKYQTPAKPFENKWTRSSS-SGXXXXXXXXXX 150
PNP+GFGVQN PQ KG++N+ Q +KPFENKWTR S +G
Sbjct: 34 PNPFGFGVQNNPQ------SKGTNNYNFGNKQNQSKPFENKWTRFSPITGGGVPASRQPD 87
Query: 149 XXXXXSDHKCTDPESCKKQIIEDFKNEAPLWKLTCYGHRKYGPCDIVGD 3
++HKC+DP+SCK+ I EDF+ E PLWK TCYGH K PCDIVGD
Sbjct: 88 NQPLSANHKCSDPDSCKRIIAEDFELERPLWKFTCYGHWKNAPCDIVGD 136
>ref|XP_002514479.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223546378|gb|EEF47879.1| nucleic acid binding
protein, putative [Ricinus communis]
Length = 282
Score = 111 bits (277), Expect = 1e-22
Identities = 55/108 (50%), Positives = 68/108 (62%), Gaps = 2/108 (1%)
Frame = -1
Query: 320 NPYGFGVQNKPQLQNNTPQKGSSNFVAKYQTPAKPFENKWTRSS--SSGXXXXXXXXXXX 147
N +GFG Q K Q Q+++P F + ++ KPFENKWTR S S+
Sbjct: 37 NSFGFGSQQKQQNQSSSP----FGFGTQSKSSTKPFENKWTRFSPISNAAATPSSRQPDN 92
Query: 146 XXXXSDHKCTDPESCKKQIIEDFKNEAPLWKLTCYGHRKYGPCDIVGD 3
++HKCTDP+SCK+QI EDF+NE PLWKLTCYGH K GPCDI GD
Sbjct: 93 QPQPANHKCTDPDSCKRQIAEDFQNEKPLWKLTCYGHSKNGPCDIGGD 140
>ref|XP_002274515.2| PREDICTED: zinc finger CCCH domain-containing protein 16-like
[Vitis vinifera]
Length = 383
Score = 110 bits (276), Expect = 1e-22
Identities = 55/112 (49%), Positives = 68/112 (60%), Gaps = 5/112 (4%)
Frame = -1
Query: 323 PNPYGFGVQNKPQLQNNTPQKGSSN---FVAKYQTPAKPFENKWTRSS--SSGXXXXXXX 159
PN GFG Q Q+ Q+ SN F + + KPFENKWTR S ++G
Sbjct: 34 PNVSGFGAQTSSNFQHTNVQQQRSNPFGFGVQSNSLPKPFENKWTRFSPLTTGSSSSSSR 93
Query: 158 XXXXXXXXSDHKCTDPESCKKQIIEDFKNEAPLWKLTCYGHRKYGPCDIVGD 3
++HKCTDPESCK+QI+EDF++E P+WKLTCYGH K PCDIVGD
Sbjct: 94 QSDNQVQPANHKCTDPESCKRQIVEDFEHERPIWKLTCYGHCKSAPCDIVGD 145
>ref|XP_006345234.1| PREDICTED: zinc finger CCCH domain-containing protein 16-like
[Solanum tuberosum]
Length = 425
Score = 110 bits (274), Expect = 3e-22
Identities = 55/106 (51%), Positives = 67/106 (63%)
Frame = -1
Query: 320 NPYGFGVQNKPQLQNNTPQKGSSNFVAKYQTPAKPFENKWTRSSSSGXXXXXXXXXXXXX 141
NP+GFGVQ+ N+ +GSS+ K Q KPFENKWTRS+++
Sbjct: 57 NPFGFGVQS------NSQPRGSSDLGLK-QNQYKPFENKWTRSATTNSSSSRQTDNQPVA 109
Query: 140 XXSDHKCTDPESCKKQIIEDFKNEAPLWKLTCYGHRKYGPCDIVGD 3
+H CTD ESC++QI+EDF NE PLW LTCYGHRK GPCDI GD
Sbjct: 110 P--NHTCTDAESCRRQIVEDFNNEKPLWLLTCYGHRKNGPCDITGD 153
>ref|XP_004251711.1| PREDICTED: zinc finger CCCH domain-containing protein 16-like
[Solanum lycopersicum]
Length = 429
Score = 110 bits (274), Expect = 3e-22
Identities = 55/106 (51%), Positives = 67/106 (63%)
Frame = -1
Query: 320 NPYGFGVQNKPQLQNNTPQKGSSNFVAKYQTPAKPFENKWTRSSSSGXXXXXXXXXXXXX 141
NP+GFGVQ+ N+ +GSS+ K Q KPFENKWTRS+++
Sbjct: 57 NPFGFGVQS------NSQPRGSSDLGLK-QNQYKPFENKWTRSATTNSSSSRQTDNQPVA 109
Query: 140 XXSDHKCTDPESCKKQIIEDFKNEAPLWKLTCYGHRKYGPCDIVGD 3
+H CTD ESC++QI+EDF NE PLW LTCYGHRK GPCDI GD
Sbjct: 110 P--NHTCTDAESCRRQIVEDFNNEKPLWLLTCYGHRKNGPCDITGD 153
>ref|XP_004157135.1| PREDICTED: zinc finger CCCH domain-containing protein 16-like
[Cucumis sativus]
Length = 360
Score = 109 bits (273), Expect = 3e-22
Identities = 57/107 (53%), Positives = 65/107 (60%)
Frame = -1
Query: 323 PNPYGFGVQNKPQLQNNTPQKGSSNFVAKYQTPAKPFENKWTRSSSSGXXXXXXXXXXXX 144
PNP+GFGV N Q K ++F +K Q KPFENKWTR S+
Sbjct: 36 PNPFGFGVPNNGQ------SKAVADFGSK-QNQYKPFENKWTRPSTPAGNAQSRKPDNHL 88
Query: 143 XXXSDHKCTDPESCKKQIIEDFKNEAPLWKLTCYGHRKYGPCDIVGD 3
+HKCTD ESCK+QI EDF+NE PLWKLTCYGH K PCDIVGD
Sbjct: 89 PSS-NHKCTDGESCKRQIAEDFQNERPLWKLTCYGHNKNEPCDIVGD 134
>ref|XP_004139162.1| PREDICTED: zinc finger CCCH domain-containing protein 16-like
[Cucumis sativus]
Length = 377
Score = 109 bits (272), Expect = 4e-22
Identities = 58/107 (54%), Positives = 66/107 (61%)
Frame = -1
Query: 323 PNPYGFGVQNKPQLQNNTPQKGSSNFVAKYQTPAKPFENKWTRSSSSGXXXXXXXXXXXX 144
PNP+GFGV N Q K ++F +K Q KPFENKWTR S+
Sbjct: 53 PNPFGFGVPNNGQ------SKAVADFGSK-QNQYKPFENKWTRPSTP-TGNAQSRKPDNH 104
Query: 143 XXXSDHKCTDPESCKKQIIEDFKNEAPLWKLTCYGHRKYGPCDIVGD 3
S+HKCTD ESCK+QI EDF+NE PLWKLTCYGH K PCDIVGD
Sbjct: 105 LPSSNHKCTDGESCKRQIAEDFQNERPLWKLTCYGHNKNEPCDIVGD 151
>dbj|BAO49736.1| nuclear pore complex protein CG1a [Nicotiana benthamiana]
Length = 429
Score = 107 bits (266), Expect = 2e-21
Identities = 53/106 (50%), Positives = 66/106 (62%)
Frame = -1
Query: 320 NPYGFGVQNKPQLQNNTPQKGSSNFVAKYQTPAKPFENKWTRSSSSGXXXXXXXXXXXXX 141
NPYGFGVQN N +GS++ K Q+P K FENKWTRS+S+
Sbjct: 57 NPYGFGVQN------NFQPRGSNDLGPK-QSPYKAFENKWTRSTSTNSSSSRQSDNQPVA 109
Query: 140 XXSDHKCTDPESCKKQIIEDFKNEAPLWKLTCYGHRKYGPCDIVGD 3
+H CTD + C++QI+EDF NE P+W LTCYGHRK GPCD+ GD
Sbjct: 110 P--NHTCTDSDWCRRQIMEDFNNEKPMWLLTCYGHRKNGPCDVTGD 153
>dbj|BAO49737.1| nuclear pore complex protein CG1b [Nicotiana benthamiana]
Length = 431
Score = 106 bits (265), Expect = 3e-21
Identities = 53/106 (50%), Positives = 66/106 (62%)
Frame = -1
Query: 320 NPYGFGVQNKPQLQNNTPQKGSSNFVAKYQTPAKPFENKWTRSSSSGXXXXXXXXXXXXX 141
NPYGFGVQN N +GS++ K Q+ K FENKWTRS+S+
Sbjct: 57 NPYGFGVQN------NFQPRGSNDLGPK-QSQYKAFENKWTRSTSTNSSSSRQSDNQPVA 109
Query: 140 XXSDHKCTDPESCKKQIIEDFKNEAPLWKLTCYGHRKYGPCDIVGD 3
+H CTD +SC++QI+EDF NE P+W LTCYGHRK GPCD+ GD
Sbjct: 110 P--NHTCTDSDSCRRQIMEDFNNEKPMWLLTCYGHRKNGPCDVTGD 153
>ref|XP_006390319.1| hypothetical protein EUTSA_v10018711mg [Eutrema salsugineum]
gi|557086753|gb|ESQ27605.1| hypothetical protein
EUTSA_v10018711mg [Eutrema salsugineum]
Length = 380
Score = 104 bits (260), Expect = 1e-20
Identities = 49/112 (43%), Positives = 65/112 (58%), Gaps = 6/112 (5%)
Frame = -1
Query: 320 NPYGFGVQNKPQLQNNTPQKGSSNFVAKYQTPA------KPFENKWTRSSSSGXXXXXXX 159
NP+GFG Q++ Q QK S+ F Q + +PFENKW R+ S+
Sbjct: 32 NPFGFGTQSRDQQPQQQQQKSSNPFGFGVQGGSNRPNQFQPFENKWQRTPSTPGGGASTQ 91
Query: 158 XXXXXXXXSDHKCTDPESCKKQIIEDFKNEAPLWKLTCYGHRKYGPCDIVGD 3
+DHKCTDP +CK+ + +D+KNE P+WKLTCYGH KY PCD+ GD
Sbjct: 92 QTGKQTQQADHKCTDPAACKRVMQDDYKNERPMWKLTCYGHWKYFPCDVTGD 143
>ref|XP_003563526.1| PREDICTED: zinc finger CCCH domain-containing protein 46-like
[Brachypodium distachyon]
Length = 386
Score = 103 bits (257), Expect = 2e-20
Identities = 52/107 (48%), Positives = 59/107 (55%)
Frame = -1
Query: 323 PNPYGFGVQNKPQLQNNTPQKGSSNFVAKYQTPAKPFENKWTRSSSSGXXXXXXXXXXXX 144
PNP+GFGVQ N P PAKPF+NKW R +S+
Sbjct: 64 PNPFGFGVQAGAAQSRNAPG------------PAKPFQNKWVRDASAPTKQPEAQPAPQA 111
Query: 143 XXXSDHKCTDPESCKKQIIEDFKNEAPLWKLTCYGHRKYGPCDIVGD 3
CTDPESCK+QI +DFKNE PLWKLTCY H + GPCDIVGD
Sbjct: 112 AHT---SCTDPESCKQQISDDFKNETPLWKLTCYAHLRSGPCDIVGD 155
>gb|EOY32217.1| Zinc finger C-x8-C-x5-C-x3-H type family protein, putative isoform
6, partial [Theobroma cacao]
Length = 344
Score = 102 bits (254), Expect = 5e-20
Identities = 53/107 (49%), Positives = 64/107 (59%)
Frame = -1
Query: 323 PNPYGFGVQNKPQLQNNTPQKGSSNFVAKYQTPAKPFENKWTRSSSSGXXXXXXXXXXXX 144
PNP+GFGVQN N KG+++F K F+N WTRSS+S
Sbjct: 51 PNPFGFGVQN------NVQSKGANDFGNKQNQ----FKNTWTRSSASSAPSLRQPDNQPQ 100
Query: 143 XXXSDHKCTDPESCKKQIIEDFKNEAPLWKLTCYGHRKYGPCDIVGD 3
+H+CTDPE CK+ IIEDF++E PLWKLTCY H K PCDIVGD
Sbjct: 101 AT--NHQCTDPELCKRTIIEDFEHERPLWKLTCYSHWKNSPCDIVGD 145
>gb|EOY32216.1| Zinc finger C-x8-C-x5-C-x3-H type family protein, putative isoform
5 [Theobroma cacao]
Length = 284
Score = 102 bits (254), Expect = 5e-20
Identities = 53/107 (49%), Positives = 64/107 (59%)
Frame = -1
Query: 323 PNPYGFGVQNKPQLQNNTPQKGSSNFVAKYQTPAKPFENKWTRSSSSGXXXXXXXXXXXX 144
PNP+GFGVQN N KG+++F K F+N WTRSS+S
Sbjct: 51 PNPFGFGVQN------NVQSKGANDFGNKQNQ----FKNTWTRSSASSAPSLRQPDNQPQ 100
Query: 143 XXXSDHKCTDPESCKKQIIEDFKNEAPLWKLTCYGHRKYGPCDIVGD 3
+H+CTDPE CK+ IIEDF++E PLWKLTCY H K PCDIVGD
Sbjct: 101 AT--NHQCTDPELCKRTIIEDFEHERPLWKLTCYSHWKNSPCDIVGD 145
>gb|EOY32215.1| Zinc finger C-x8-C-x5-C-x3-H type family protein, putative isoform
4, partial [Theobroma cacao]
Length = 367
Score = 102 bits (254), Expect = 5e-20
Identities = 53/107 (49%), Positives = 64/107 (59%)
Frame = -1
Query: 323 PNPYGFGVQNKPQLQNNTPQKGSSNFVAKYQTPAKPFENKWTRSSSSGXXXXXXXXXXXX 144
PNP+GFGVQN N KG+++F K F+N WTRSS+S
Sbjct: 36 PNPFGFGVQN------NVQSKGANDFGNKQNQ----FKNTWTRSSASSAPSLRQPDNQPQ 85
Query: 143 XXXSDHKCTDPESCKKQIIEDFKNEAPLWKLTCYGHRKYGPCDIVGD 3
+H+CTDPE CK+ IIEDF++E PLWKLTCY H K PCDIVGD
Sbjct: 86 AT--NHQCTDPELCKRTIIEDFEHERPLWKLTCYSHWKNSPCDIVGD 130
>gb|EOY32214.1| Zinc finger C-x8-C-x5-C-x3-H type family protein, putative isoform
3, partial [Theobroma cacao]
Length = 368
Score = 102 bits (254), Expect = 5e-20
Identities = 53/107 (49%), Positives = 64/107 (59%)
Frame = -1
Query: 323 PNPYGFGVQNKPQLQNNTPQKGSSNFVAKYQTPAKPFENKWTRSSSSGXXXXXXXXXXXX 144
PNP+GFGVQN N KG+++F K F+N WTRSS+S
Sbjct: 36 PNPFGFGVQN------NVQSKGANDFGNKQNQ----FKNTWTRSSASSAPSLRQPDNQPQ 85
Query: 143 XXXSDHKCTDPESCKKQIIEDFKNEAPLWKLTCYGHRKYGPCDIVGD 3
+H+CTDPE CK+ IIEDF++E PLWKLTCY H K PCDIVGD
Sbjct: 86 AT--NHQCTDPELCKRTIIEDFEHERPLWKLTCYSHWKNSPCDIVGD 130
>gb|EOY32212.1| Zinc finger C-x8-C-x5-C-x3-H type family protein, putative isoform
1 [Theobroma cacao] gi|508784957|gb|EOY32213.1| Zinc
finger C-x8-C-x5-C-x3-H type family protein, putative
isoform 1 [Theobroma cacao]
Length = 393
Score = 102 bits (254), Expect = 5e-20
Identities = 53/107 (49%), Positives = 64/107 (59%)
Frame = -1
Query: 323 PNPYGFGVQNKPQLQNNTPQKGSSNFVAKYQTPAKPFENKWTRSSSSGXXXXXXXXXXXX 144
PNP+GFGVQN N KG+++F K F+N WTRSS+S
Sbjct: 51 PNPFGFGVQN------NVQSKGANDFGNKQNQ----FKNTWTRSSASSAPSLRQPDNQPQ 100
Query: 143 XXXSDHKCTDPESCKKQIIEDFKNEAPLWKLTCYGHRKYGPCDIVGD 3
+H+CTDPE CK+ IIEDF++E PLWKLTCY H K PCDIVGD
Sbjct: 101 AT--NHQCTDPELCKRTIIEDFEHERPLWKLTCYSHWKNSPCDIVGD 145