BLASTX nr result
ID: Zingiber25_contig00030260
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00030260
(2063 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001048381.1| Os02g0795000 [Oryza sativa Japonica Group] g... 74 3e-13
gb|EEC74168.1| hypothetical protein OsI_09271 [Oryza sativa Indi... 74 3e-13
gb|EEE57968.1| hypothetical protein OsJ_08707 [Oryza sativa Japo... 72 8e-13
ref|XP_004954214.1| PREDICTED: ubiquitin carboxyl-terminal hydro... 67 8e-12
gb|EMT02485.1| Ubiquitin carboxyl-terminal hydrolase 23 [Aegilop... 51 4e-11
gb|EOY29564.1| Ubiquitin carboxyl-terminal hydrolase, putative [... 66 7e-08
ref|XP_006343657.1| PREDICTED: ubiquitin carboxyl-terminal hydro... 64 3e-07
ref|XP_004242587.1| PREDICTED: ubiquitin carboxyl-terminal hydro... 63 4e-07
ref|XP_003572898.1| PREDICTED: ubiquitin carboxyl-terminal hydro... 61 2e-06
>ref|NP_001048381.1| Os02g0795000 [Oryza sativa Japonica Group]
gi|47497222|dbj|BAD19267.1| putative
hematopoietic-specific IL-2 deubiquitinating enzyme
[Oryza sativa Japonica Group]
gi|113537912|dbj|BAF10295.1| Os02g0795000 [Oryza sativa
Japonica Group]
Length = 1185
Score = 73.9 bits (180), Expect(2) = 3e-13
Identities = 36/85 (42%), Positives = 51/85 (60%), Gaps = 2/85 (2%)
Frame = +2
Query: 1547 VPRWDDTELRKLGQNDIESSTSTSIRYALDEWDLEY--GGKLKLRKSPQSFDRPDLFQHS 1720
VPRWDDTE++ + +I + SI Y LDEWD EY G + K+RK F P+ FQ +
Sbjct: 1101 VPRWDDTEIKNTKETEILHPRTRSIGYVLDEWDEEYDRGKRKKIRKPKHGFSGPNPFQET 1160
Query: 1721 AKQKAEQNSKAKLESLRPGNQPLRI 1795
A ++ Q + + + + GNQPLRI
Sbjct: 1161 ANIRSRQRMRLQSDQTKSGNQPLRI 1185
Score = 30.0 bits (66), Expect(2) = 3e-13
Identities = 39/178 (21%), Positives = 71/178 (39%), Gaps = 10/178 (5%)
Frame = +3
Query: 1014 SASKKQHNPTKLKQQKYANSAQEGLLFFHNHLFLASLKLRLIQRSIKKKKQSGRLKISLK 1193
+ S K + K ++ + F L LAS+KL +R K+ K+ L + ++
Sbjct: 924 TGSGKLNKKMNCKSKRQVKYPAVRMFFGPKQLLLASVKLHK-KRKHKRSKKHHALSVHIE 982
Query: 1194 D---DQVLSTSEAIKNVAAA------KHSCSQHLGSGLSKANNLEIVKIGSCNGKSSNIS 1346
DQ STSE + + + K SC+ ++ N + G+ N + +
Sbjct: 983 SIITDQQTSTSETVFSKIISHKSRGQKRSCASASSEDGTQLFNKKQHIEGTTNSVPMDNN 1042
Query: 1347 DNK-EKVKKGENTILVPRLQKTRSTYAERSLNSRRTIADDQIKSQNYFFNLLTAGLKE 1517
D K + + L + + +SR + ++ + FNLLT GL+E
Sbjct: 1043 DTKLASADSNDAKLASAELPSSCTNSLVNQTDSRNNVNANE--RGPWHFNLLTRGLRE 1098
>gb|EEC74168.1| hypothetical protein OsI_09271 [Oryza sativa Indica Group]
Length = 1156
Score = 73.9 bits (180), Expect(2) = 3e-13
Identities = 36/85 (42%), Positives = 51/85 (60%), Gaps = 2/85 (2%)
Frame = +2
Query: 1547 VPRWDDTELRKLGQNDIESSTSTSIRYALDEWDLEY--GGKLKLRKSPQSFDRPDLFQHS 1720
VPRWDDTE++ + +I + SI Y LDEWD EY G + K+RK F P+ FQ +
Sbjct: 1072 VPRWDDTEIKNTKETEILHPRTRSIGYVLDEWDEEYDRGKRKKIRKPKHGFSGPNPFQET 1131
Query: 1721 AKQKAEQNSKAKLESLRPGNQPLRI 1795
A ++ Q + + + + GNQPLRI
Sbjct: 1132 ANIRSRQRMRLQSDQTKSGNQPLRI 1156
Score = 30.0 bits (66), Expect(2) = 3e-13
Identities = 39/178 (21%), Positives = 71/178 (39%), Gaps = 10/178 (5%)
Frame = +3
Query: 1014 SASKKQHNPTKLKQQKYANSAQEGLLFFHNHLFLASLKLRLIQRSIKKKKQSGRLKISLK 1193
+ S K + K ++ + F L LAS+KL +R K+ K+ L + ++
Sbjct: 895 TGSGKLNKKMNCKSKRQVKYPAVRMFFGPKQLLLASVKLHK-KRKHKRSKKHHALSVHIE 953
Query: 1194 D---DQVLSTSEAIKNVAAA------KHSCSQHLGSGLSKANNLEIVKIGSCNGKSSNIS 1346
DQ STSE + + + K SC+ ++ N + G+ N + +
Sbjct: 954 SIITDQQTSTSETVFSKIISHKSRGQKRSCASASSEDGTQLFNKKQHIEGTTNSVPMDNN 1013
Query: 1347 DNK-EKVKKGENTILVPRLQKTRSTYAERSLNSRRTIADDQIKSQNYFFNLLTAGLKE 1517
D K + + L + + +SR + ++ + FNLLT GL+E
Sbjct: 1014 DTKLASADSNDAKLASAELPSSCTNSLVNQTDSRNNVNANE--RGPWHFNLLTRGLRE 1069
>gb|EEE57968.1| hypothetical protein OsJ_08707 [Oryza sativa Japonica Group]
Length = 1142
Score = 72.4 bits (176), Expect(2) = 8e-13
Identities = 35/85 (41%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
Frame = +2
Query: 1547 VPRWDDTELRKLGQNDIESSTSTSIRYALDEWDLEY--GGKLKLRKSPQSFDRPDLFQHS 1720
VPRWDDTE++ + +I + SI Y LDEWD EY G + K+RK F P+ FQ +
Sbjct: 1058 VPRWDDTEIKNTKETEILHPRTRSIGYVLDEWDEEYDRGKRKKIRKPKHGFSGPNPFQET 1117
Query: 1721 AKQKAEQNSKAKLESLRPGNQPLRI 1795
A ++ Q + + + + GNQP RI
Sbjct: 1118 ANIRSRQRMRLQSDQTKSGNQPFRI 1142
Score = 30.0 bits (66), Expect(2) = 8e-13
Identities = 39/178 (21%), Positives = 71/178 (39%), Gaps = 10/178 (5%)
Frame = +3
Query: 1014 SASKKQHNPTKLKQQKYANSAQEGLLFFHNHLFLASLKLRLIQRSIKKKKQSGRLKISLK 1193
+ S K + K ++ + F L LAS+KL +R K+ K+ L + ++
Sbjct: 881 TGSGKLNKKMNCKSKRQVKYPAVRMFFGPKQLLLASVKLHK-KRKHKRSKKHHALSVHIE 939
Query: 1194 D---DQVLSTSEAIKNVAAA------KHSCSQHLGSGLSKANNLEIVKIGSCNGKSSNIS 1346
DQ STSE + + + K SC+ ++ N + G+ N + +
Sbjct: 940 SIITDQQTSTSETVFSKIISHKSRGQKRSCASASSEDGTQLFNKKQHIEGTTNSVPMDNN 999
Query: 1347 DNK-EKVKKGENTILVPRLQKTRSTYAERSLNSRRTIADDQIKSQNYFFNLLTAGLKE 1517
D K + + L + + +SR + ++ + FNLLT GL+E
Sbjct: 1000 DTKLASADSNDAKLASAELPSSCTNSLVNQTDSRNNVNANE--RGPWHFNLLTRGLRE 1055
>ref|XP_004954214.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 23-like [Setaria
italica]
Length = 1085
Score = 67.4 bits (163), Expect(2) = 8e-12
Identities = 35/85 (41%), Positives = 51/85 (60%), Gaps = 2/85 (2%)
Frame = +2
Query: 1547 VPRWDDTELRKLGQNDIESSTSTSIRYALDEWDLEY--GGKLKLRKSPQSFDRPDLFQHS 1720
VP+WDD ++ +++ S+STSI Y LDE D EY G + K+RKS Q F P+ FQ
Sbjct: 1001 VPQWDDDDMPNTKAAEMQHSSSTSIGYVLDERDEEYDRGRRKKVRKSKQGFSGPNPFQEM 1060
Query: 1721 AKQKAEQNSKAKLESLRPGNQPLRI 1795
++ Q + + + R G+QPLRI
Sbjct: 1061 KNIRSRQRRRIQTDQARSGHQPLRI 1085
Score = 31.6 bits (70), Expect(2) = 8e-12
Identities = 46/212 (21%), Positives = 83/212 (39%), Gaps = 14/212 (6%)
Frame = +3
Query: 921 DASCLPCQSKYQNERDSSNVHIKENNFPKQKSASKKQ-----------HNPTKLKQQKYA 1067
D + C+ K +E DS++V E+ S + Q H K+K +K+
Sbjct: 792 DTGHVNCEKKIGSE-DSAHVASSEDCAQMMCSENSVQVVDKDPCHGNLHKIIKIKSKKHV 850
Query: 1068 NSAQEGLLFFHNHLFLASLK--LRLIQRSIKKKKQSGRLKISLKDDQVLSTSEAIKNVAA 1241
+ F L LASLK + + +++ S S DD+ STSE +
Sbjct: 851 SHPAVNFYFGSKQLLLASLKPCKKRKHKRTRRRLTSDANAESTGDDRQTSTSETVLTSGM 910
Query: 1242 AKHSCSQHLG-SGLSKANNLEIVKIGSCNGKSSNISDNKEKVKKGENTILVPRLQKTRST 1418
++ S Q + S + +++ G S +K + T+ L +
Sbjct: 911 SRKSHRQKRSRNSASSEDAVQMYNKKQNLGNSCAAELTLDKKVSKDATLAAAELAASSCP 970
Query: 1419 YAERSLNSRRTIADDQIKSQNYFFNLLTAGLK 1514
+ + +S + D+ ++ FNLLT GL+
Sbjct: 971 SSVLNPDSGKCGVTDE--KGSWHFNLLTRGLR 1000
>gb|EMT02485.1| Ubiquitin carboxyl-terminal hydrolase 23 [Aegilops tauschii]
Length = 885
Score = 51.2 bits (121), Expect(2) = 4e-11
Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Frame = +2
Query: 1547 VPRWDDTELRKLGQNDIESSTSTSIRYALDEWDLEY--GGKLKLRKSPQSFDRPDLFQHS 1720
VP WDD ++ + +I Y LDEWD +Y G + K RK + + P+ FQ +
Sbjct: 801 VPLWDDIDMSGRKSEFQYPRRTENIGYVLDEWDEDYDRGKRKKARKPREESNGPNPFQEA 860
Query: 1721 AKQKAEQNSKAKLESLRPGNQPLRI 1795
A +A + + + R GNQP RI
Sbjct: 861 ADVRARPRKRPRSDQPRWGNQPRRI 885
Score = 45.4 bits (106), Expect(2) = 4e-11
Identities = 45/168 (26%), Positives = 77/168 (45%), Gaps = 6/168 (3%)
Frame = +3
Query: 1032 HNPTKLKQQKYANSAQEGLLFFHNHLFLASLKLRLIQRSIKKKKQSGRLKISLKDDQVLS 1211
H LK +K+ + + LLF LA+LKLR ++ + K+QS + + DDQ S
Sbjct: 637 HTMKDLKSKKHKDYSTVHLLFVSKQPLLAALKLRKKRKHKRAKRQSIDNGV-IADDQQTS 695
Query: 1212 TSEAI--KNVAAAKHSCSQHLGSGLSKANNLEI----VKIGSCNGKSSNISDNKEKVKKG 1373
TSE + K ++ H + + S N +EI + C ++++ +K+ K
Sbjct: 696 TSETVFTKEISCKSHRRRKRSRASASSDNGVEISTKKPHLVDCPSNAADLPVDKKDDKYA 755
Query: 1374 ENTILVPRLQKTRSTYAERSLNSRRTIADDQIKSQNYFFNLLTAGLKE 1517
T+ L + +SR A++++ S F+LLT GL E
Sbjct: 756 --TLASAELPGACVSSVVDQTDSRSADANERVPSH---FDLLTRGLSE 798
>gb|EOY29564.1| Ubiquitin carboxyl-terminal hydrolase, putative [Theobroma cacao]
Length = 970
Score = 65.9 bits (159), Expect = 7e-08
Identities = 41/87 (47%), Positives = 51/87 (58%), Gaps = 4/87 (4%)
Frame = +2
Query: 1547 VPRWDDTELRKLGQNDIESS--TSTSIRYALDEWDLEY--GGKLKLRKSPQSFDRPDLFQ 1714
V RWDD ++ Q IE+S S I Y LDEWD EY G + K+R + Q F P+LFQ
Sbjct: 886 VARWDDVDINSSSQT-IEASGLESVKIGYVLDEWDEEYDRGKRKKIRHNKQHFGGPNLFQ 944
Query: 1715 HSAKQKAEQNSKAKLESLRPGNQPLRI 1795
A +K Q KAK + L GN+PLRI
Sbjct: 945 QVATKKT-QVKKAKFDRLSSGNRPLRI 970
>ref|XP_006343657.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 23-like [Solanum
tuberosum]
Length = 931
Score = 63.9 bits (154), Expect = 3e-07
Identities = 37/90 (41%), Positives = 48/90 (53%), Gaps = 2/90 (2%)
Frame = +2
Query: 1532 GILEFVPRWDDTELRKLGQNDIESSTSTSIRYALDEWDLEY--GGKLKLRKSPQSFDRPD 1705
G+ V RWDD E+R L + ++ +I Y DEWD EY G + K+R S F P+
Sbjct: 842 GLESSVARWDDVEVRSLNGVEAQNGNCVTIGYIGDEWDEEYDTGKRRKIRSSKIEFGGPN 901
Query: 1706 LFQHSAKQKAEQNSKAKLESLRPGNQPLRI 1795
LFQ A K + KA+LE NQP RI
Sbjct: 902 LFQEIASNKTKV-KKARLERSSSANQPFRI 930
>ref|XP_004242587.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 23-like [Solanum
lycopersicum]
Length = 923
Score = 63.2 bits (152), Expect = 4e-07
Identities = 37/90 (41%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
Frame = +2
Query: 1532 GILEFVPRWDDTELRKLGQNDIESSTSTSIRYALDEWDLEY--GGKLKLRKSPQSFDRPD 1705
G+ V RWDD E+R L + ++ +I Y DEWD EY G + K+R S F P+
Sbjct: 834 GLESSVARWDDVEVRSLKGVEAQNGNCVTIGYIGDEWDEEYDTGKRRKIRSSKIEFGGPN 893
Query: 1706 LFQHSAKQKAEQNSKAKLESLRPGNQPLRI 1795
LFQ A +K + KA+LE NQP RI
Sbjct: 894 LFQDFASKKTKV-KKARLERSSSANQPFRI 922
>ref|XP_003572898.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 23-like
[Brachypodium distachyon]
Length = 1051
Score = 61.2 bits (147), Expect = 2e-06
Identities = 33/86 (38%), Positives = 46/86 (53%), Gaps = 3/86 (3%)
Frame = +2
Query: 1547 VPRWDDTELRKLGQNDIESSTSTSIRYALDEWDLEY--GGKLKLR-KSPQSFDRPDLFQH 1717
VPRW D ++ + + + SI Y LD+WD EY G + K+R KS + P+ FQ
Sbjct: 966 VPRWVDIDMPYTKTTEFQHMRTNSIGYVLDQWDEEYDHGRRKKVRRKSKDEYGGPNHFQE 1025
Query: 1718 SAKQKAEQNSKAKLESLRPGNQPLRI 1795
++ Q + K RPGNQPLRI
Sbjct: 1026 ITDMRSRQGKRLKSGQTRPGNQPLRI 1051