BLASTX nr result
ID: Zingiber25_contig00030215
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00030215
(536 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006659570.1| PREDICTED: LOW QUALITY PROTEIN: pre-rRNA-pro... 75 1e-11
ref|NP_001062197.1| Os08g0508600 [Oryza sativa Japonica Group] g... 71 1e-10
gb|EAZ43285.1| hypothetical protein OsJ_27881 [Oryza sativa Japo... 68 1e-09
gb|EAZ07564.1| hypothetical protein OsI_29817 [Oryza sativa Indi... 68 1e-09
gb|EMS54968.1| hypothetical protein TRIUR3_11840 [Triticum urartu] 67 3e-09
gb|EMT02425.1| hypothetical protein F775_19131 [Aegilops tauschii] 66 4e-09
ref|XP_002466720.1| hypothetical protein SORBIDRAFT_01g012820 [S... 66 4e-09
ref|XP_004986336.1| PREDICTED: uncharacterized protein LOC101770... 65 1e-08
dbj|BAJ84910.1| predicted protein [Hordeum vulgare subsp. vulgare] 65 1e-08
gb|AFW68078.1| pre-rRNA-processing protein TSR2 [Zea mays] 64 2e-08
ref|XP_003575879.1| PREDICTED: pre-rRNA-processing protein TSR2 ... 64 2e-08
ref|XP_003561571.1| PREDICTED: pre-rRNA-processing protein TSR2-... 64 2e-08
ref|NP_001146941.1| LOC100280550 [Zea mays] gi|195605470|gb|ACG2... 63 5e-08
ref|XP_004971050.1| PREDICTED: pre-rRNA-processing protein TSR2-... 62 6e-08
gb|AAS79569.1| hypothetical protein [Ipomoea trifida] gi|1171659... 60 2e-07
ref|XP_002319614.1| predicted protein [Populus trichocarpa] gi|5... 60 4e-07
ref|XP_002328370.1| predicted protein [Populus trichocarpa] gi|5... 60 4e-07
ref|XP_006471770.1| PREDICTED: pre-rRNA-processing protein TSR2 ... 59 5e-07
ref|XP_006433074.1| hypothetical protein CICLE_v10002511mg [Citr... 59 5e-07
gb|EOY11156.1| Pre-rRNA-processing protein TSR2, putative [Theob... 58 1e-06
>ref|XP_006659570.1| PREDICTED: LOW QUALITY PROTEIN: pre-rRNA-processing protein
TSR2-like [Oryza brachyantha]
Length = 196
Score = 74.7 bits (182), Expect = 1e-11
Identities = 41/92 (44%), Positives = 60/92 (65%), Gaps = 11/92 (11%)
Frame = -2
Query: 535 EEVAEELVIMHEDFLKGNYESIEKLRRLGPIATSVAQSKKIV---------DYDSDEVSE 383
EE+AE+L+IMHE+ ++ NY S+EKLR P +V+QS+KI D D D+
Sbjct: 96 EEIAEQLLIMHEECMQSNYSSVEKLRNTRPQGNAVSQSRKISVDGDDDSSDDDDDDDEPS 155
Query: 382 MIVDESNASD-MVVEKPK-SERVPDEDGWSTV 293
M+ +E+ +D MVV++PK S+ VPD DGW+ V
Sbjct: 156 MVDNEAGGADKMVVDEPKPSKPVPDADGWTVV 187
>ref|NP_001062197.1| Os08g0508600 [Oryza sativa Japonica Group]
gi|42408991|dbj|BAD10246.1| unknown protein [Oryza
sativa Japonica Group] gi|42409347|dbj|BAD10662.1|
unknown protein [Oryza sativa Japonica Group]
gi|113624166|dbj|BAF24111.1| Os08g0508600 [Oryza sativa
Japonica Group] gi|215740471|dbj|BAG97127.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 198
Score = 71.2 bits (173), Expect = 1e-10
Identities = 42/94 (44%), Positives = 57/94 (60%), Gaps = 13/94 (13%)
Frame = -2
Query: 535 EEVAEELVIMHEDFLKGNYESIEKLRRLGPIATSVAQSKKIV------------DYDSDE 392
EEVAE+L+IMHE+ L+ NY S+EKLR +V+QS+K+V D D E
Sbjct: 96 EEVAEQLLIMHEECLQSNYSSVEKLRNSRAQGNAVSQSRKMVVDGDDDSSDDEDDDDDGE 155
Query: 391 VSEMIVDESNASDMVVEKPK-SERVPDEDGWSTV 293
S M + +A M V++PK S+ VPD DGW+TV
Sbjct: 156 PSMMDNEAGSAEKMAVDEPKPSKPVPDADGWTTV 189
>gb|EAZ43285.1| hypothetical protein OsJ_27881 [Oryza sativa Japonica Group]
Length = 226
Score = 68.2 bits (165), Expect = 1e-09
Identities = 40/93 (43%), Positives = 56/93 (60%), Gaps = 13/93 (13%)
Frame = -2
Query: 532 EVAEELVIMHEDFLKGNYESIEKLRRLGPIATSVAQSKKIV------------DYDSDEV 389
+VAE+L+IMHE+ L+ NY S+EKLR +V+QS+K+V D D E
Sbjct: 125 QVAEQLLIMHEECLQSNYSSVEKLRNSRAQGNAVSQSRKMVVDGDDDSSDDEDDDDDGEP 184
Query: 388 SEMIVDESNASDMVVEKPK-SERVPDEDGWSTV 293
S M + +A M V++PK S+ VPD DGW+TV
Sbjct: 185 SMMDNEAGSAEKMAVDEPKPSKPVPDADGWTTV 217
>gb|EAZ07564.1| hypothetical protein OsI_29817 [Oryza sativa Indica Group]
Length = 227
Score = 67.8 bits (164), Expect = 1e-09
Identities = 40/94 (42%), Positives = 56/94 (59%), Gaps = 14/94 (14%)
Frame = -2
Query: 532 EVAEELVIMHEDFLKGNYESIEKLRRLGPIATSVAQSKKIV-------------DYDSDE 392
+VAE+L+IMHE+ L+ NY S+EKLR +V+QS+K+V D D E
Sbjct: 125 QVAEQLLIMHEECLQSNYSSVEKLRNSRAQGNAVSQSRKMVVDGDDDSSDDEDDDDDDGE 184
Query: 391 VSEMIVDESNASDMVVEKPK-SERVPDEDGWSTV 293
S M + +A M V++PK S+ VPD DGW+TV
Sbjct: 185 PSMMDNEAGSAEKMAVDEPKPSKPVPDADGWTTV 218
>gb|EMS54968.1| hypothetical protein TRIUR3_11840 [Triticum urartu]
Length = 117
Score = 66.6 bits (161), Expect = 3e-09
Identities = 37/87 (42%), Positives = 55/87 (63%), Gaps = 7/87 (8%)
Frame = -2
Query: 532 EVAEELVIMHEDFLKGNYESIEKLRRLGPIATSVAQSKKIVDYDSDEVSEMIVDE----- 368
EVAE+++IMHE+ L+ NY SIEKLR +V+QS+ +V + D+ S+ D+
Sbjct: 21 EVAEQVLIMHEECLQNNYSSIEKLRNTRAQGNAVSQSRMMVTDEGDDSSDDSSDDDDGDE 80
Query: 367 -SNASDMVVEKPK-SERVPDEDGWSTV 293
+ A DM V++PK S+ PD DGW+ V
Sbjct: 81 PARADDMSVDEPKPSKPAPDADGWTVV 107
>gb|EMT02425.1| hypothetical protein F775_19131 [Aegilops tauschii]
Length = 168
Score = 66.2 bits (160), Expect = 4e-09
Identities = 37/86 (43%), Positives = 55/86 (63%), Gaps = 7/86 (8%)
Frame = -2
Query: 529 VAEELVIMHEDFLKGNYESIEKLRRLGPIATSVAQSKKIVDYDSDEVSEMIVDE------ 368
VAE+++IMHE+ L+ NY SIEKLR A +V+QS+ +V + D+ S+ D+
Sbjct: 73 VAEQVLIMHEECLQNNYSSIEKLRNTRAQANAVSQSRMMVTDEGDDSSDDSSDDDDGDEP 132
Query: 367 SNASDMVVEKPK-SERVPDEDGWSTV 293
+ A DM V++PK S+ PD DGW+ V
Sbjct: 133 ARADDMSVDEPKPSKPAPDADGWTVV 158
>ref|XP_002466720.1| hypothetical protein SORBIDRAFT_01g012820 [Sorghum bicolor]
gi|241920574|gb|EER93718.1| hypothetical protein
SORBIDRAFT_01g012820 [Sorghum bicolor]
Length = 200
Score = 66.2 bits (160), Expect = 4e-09
Identities = 38/91 (41%), Positives = 54/91 (59%), Gaps = 10/91 (10%)
Frame = -2
Query: 535 EEVAEELVIMHEDFLKGNYESIEKLRRLGPIATSVAQSKKIV---------DYDSDEVSE 383
EEVAE+L+I+HE+ L+ NY SIEKLR +V+QS++IV D D+ S
Sbjct: 100 EEVAEQLLIIHEECLQNNYSSIEKLRNSHVQGNAVSQSRQIVADDDDDSDSSDDGDDTSM 159
Query: 382 MIVDESNASDMVVEKPKSER-VPDEDGWSTV 293
M E+ +M V++P+ R PD DGW+ V
Sbjct: 160 MEDQEAPPEEMAVDRPRPPRPTPDADGWTVV 190
>ref|XP_004986336.1| PREDICTED: uncharacterized protein LOC101770842 [Setaria italica]
Length = 213
Score = 64.7 bits (156), Expect = 1e-08
Identities = 39/93 (41%), Positives = 59/93 (63%), Gaps = 12/93 (12%)
Frame = -2
Query: 535 EEVAEELVIMHEDFLKGNYESIEKLRRLGPIATSVAQSKKI---------VDYDSDEVSE 383
EEVAE+L+IMHE+ L+ NY SIE+LR L +V+QS+++ D D D+ +
Sbjct: 88 EEVAEQLLIMHEECLQSNYSSIERLRNLHVQGNAVSQSRQVEGSDDGRDSSDDDDDDDAL 147
Query: 382 MIVDESNAS--DMVVEKPK-SERVPDEDGWSTV 293
M+ D+S A+ +M V++P+ S V D DGW+ V
Sbjct: 148 MMDDDSVAAPEEMAVDRPRPSNPVTDADGWTVV 180
>dbj|BAJ84910.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 191
Score = 64.7 bits (156), Expect = 1e-08
Identities = 37/89 (41%), Positives = 55/89 (61%), Gaps = 9/89 (10%)
Frame = -2
Query: 532 EVAEELVIMHEDFLKGNYESIEKLRRLGPIATSVAQSKKIVDYDSDEVSEMIVDESNASD 353
EVAE+++IMHE+ L+ NY SI+KLR +V+QS+ +V D D+ S+ D+ N+SD
Sbjct: 96 EVAEQVLIMHEECLQNNYSSIDKLRNTRTQGAAVSQSRMMVTDDDDDSSD---DDDNSSD 152
Query: 352 --------MVVEKPKSER-VPDEDGWSTV 293
M V++PK + PD DGW+ V
Sbjct: 153 DDDGDESSMSVDEPKPPKPAPDADGWTVV 181
>gb|AFW68078.1| pre-rRNA-processing protein TSR2 [Zea mays]
Length = 199
Score = 64.3 bits (155), Expect = 2e-08
Identities = 35/91 (38%), Positives = 54/91 (59%), Gaps = 10/91 (10%)
Frame = -2
Query: 535 EEVAEELVIMHEDFLKGNYESIEKLRRLGPIATSVAQSKKIV---------DYDSDEVSE 383
EEVAE+ +I+HE+ L+ NY SIEKLR +V+QS++IV D D+ S
Sbjct: 99 EEVAEQFLIIHEECLQNNYSSIEKLRNSPVPGNAVSQSRQIVGDDDDDSDSSDDGDDTSM 158
Query: 382 MIVDESNASDMVVEKPKSER-VPDEDGWSTV 293
+ +E+ +M V++P+ + PD DGW+ V
Sbjct: 159 VADEEAGPEEMAVDRPRPPKPTPDADGWTVV 189
>ref|XP_003575879.1| PREDICTED: pre-rRNA-processing protein TSR2 homolog [Brachypodium
distachyon]
Length = 192
Score = 63.9 bits (154), Expect = 2e-08
Identities = 39/89 (43%), Positives = 57/89 (64%), Gaps = 8/89 (8%)
Frame = -2
Query: 535 EEVAEELVIMHEDFLKGNYESIEKLRRLGPIATSVAQSKKIVDYDSDEVSEMIVDESNA- 359
EEVAE+++IMHE L+GNY SIEKLR +V+ S+++V D D+ S+ + S A
Sbjct: 95 EEVAEQILIMHEGCLQGNYSSIEKLRNTHVQGNAVSLSRQMVTDDDDDSSDDDGEPSMAG 154
Query: 358 ------SDMVVEKPK-SERVPDEDGWSTV 293
+MVV++PK S+ VPD DG++ V
Sbjct: 155 NEAVRPDEMVVDEPKPSKPVPDADGFTPV 183
>ref|XP_003561571.1| PREDICTED: pre-rRNA-processing protein TSR2-like [Brachypodium
distachyon]
Length = 192
Score = 63.9 bits (154), Expect = 2e-08
Identities = 39/89 (43%), Positives = 57/89 (64%), Gaps = 8/89 (8%)
Frame = -2
Query: 535 EEVAEELVIMHEDFLKGNYESIEKLRRLGPIATSVAQSKKIVDYDSDEVSEMIVDESNA- 359
EEVAE+++IMHE L+GNY SIEKLR +V+ S+++V D D+ S+ + S A
Sbjct: 95 EEVAEQILIMHEGCLQGNYSSIEKLRNTHVQGNAVSLSRQMVTDDDDDSSDDDGEPSMAG 154
Query: 358 ------SDMVVEKPK-SERVPDEDGWSTV 293
+MVV++PK S+ VPD DG++ V
Sbjct: 155 NEAVRPDEMVVDEPKPSKPVPDADGFTPV 183
>ref|NP_001146941.1| LOC100280550 [Zea mays] gi|195605470|gb|ACG24565.1|
pre-rRNA-processing protein TSR2 [Zea mays]
Length = 195
Score = 62.8 bits (151), Expect = 5e-08
Identities = 34/91 (37%), Positives = 54/91 (59%), Gaps = 10/91 (10%)
Frame = -2
Query: 535 EEVAEELVIMHEDFLKGNYESIEKLRRLGPIATSVAQSKKIV---------DYDSDEVSE 383
EEVAE+ +I+HE+ L+ N+ SIEKLR +V+QS++IV D D+ S
Sbjct: 95 EEVAEQFLIIHEECLQNNFSSIEKLRNSRVPGNAVSQSRQIVGDDDDDSDSSDDGDDTSM 154
Query: 382 MIVDESNASDMVVEKPKSER-VPDEDGWSTV 293
+ +E+ +M V++P+ + PD DGW+ V
Sbjct: 155 VADEEAGPEEMAVDRPRPPKPTPDADGWTVV 185
>ref|XP_004971050.1| PREDICTED: pre-rRNA-processing protein TSR2-like [Setaria italica]
Length = 199
Score = 62.4 bits (150), Expect = 6e-08
Identities = 39/92 (42%), Positives = 59/92 (64%), Gaps = 11/92 (11%)
Frame = -2
Query: 535 EEVAEELVIMHEDFLKGNYESIEKLRRLGPIATSVAQSKKI-VDYDSDEVSE-------M 380
EEVAE+L+IMHE+ L+ NY SIE LR ++V+QS++I D D + S+ M
Sbjct: 95 EEVAEQLLIMHEECLQSNYSSIEVLRNSHVQGSAVSQSRQISADGDDSDSSDDDDGDASM 154
Query: 379 IVDESNAS--DMVVEKPK-SERVPDEDGWSTV 293
+ DE+ A+ +M V++P+ S+ PD DGW+ V
Sbjct: 155 MEDEAAAAPEEMAVDRPRPSKPAPDADGWTVV 186
>gb|AAS79569.1| hypothetical protein [Ipomoea trifida] gi|117165980|dbj|BAF36282.1|
hypothetical protein [Ipomoea trifida]
Length = 201
Score = 60.5 bits (145), Expect = 2e-07
Identities = 36/98 (36%), Positives = 56/98 (57%), Gaps = 16/98 (16%)
Frame = -2
Query: 535 EEVAEELVIMHEDFLKGNYESIEKLRRLGPIATSVAQSKKIVDYDSDE------------ 392
EEVAE+++IMHE +GN+ESI +L+R P ++V S++ D DE
Sbjct: 95 EEVAEKMMIMHEQCTEGNFESINELKRTNPGNSAVTYSRQAASDDEDEDDDVENDKVGDD 154
Query: 391 VSEMIVDESNA---SDMVVEKPK-SERVPDEDGWSTVT 290
S+M VD S DM+V++P+ ++ EDGW+ V+
Sbjct: 155 SSDMAVDASEVHGQKDMMVDEPRTNDGAETEDGWTVVS 192
>ref|XP_002319614.1| predicted protein [Populus trichocarpa]
gi|566259508|ref|XP_006389312.1| hypothetical protein
POPTR_0030s00320g [Populus trichocarpa]
gi|550312072|gb|ERP48226.1| hypothetical protein
POPTR_0030s00320g [Populus trichocarpa]
Length = 212
Score = 59.7 bits (143), Expect = 4e-07
Identities = 37/100 (37%), Positives = 55/100 (55%), Gaps = 18/100 (18%)
Frame = -2
Query: 535 EEVAEELVIMHEDFLKGNYESIEKLRRLGPIATSVAQSKKIVDYD------------SDE 392
EEVAE+L+IMHE+ L+GNY SI+KLR GP + K+ V+ D D+
Sbjct: 104 EEVAEKLMIMHEECLEGNYSSIQKLRDEGPRMGAHQHVKQAVEDDDDSEDSDSDDKMGDD 163
Query: 391 VSEMIVD------ESNASDMVVEKPKSERVPDEDGWSTVT 290
S M+VD ++N + V +P ++ EDGW+ V+
Sbjct: 164 GSNMMVDTPEFQLKTNLVNKPVNEPGAKEAQSEDGWTVVS 203
>ref|XP_002328370.1| predicted protein [Populus trichocarpa]
gi|566169539|ref|XP_006382739.1| hypothetical protein
POPTR_0005s04940g [Populus trichocarpa]
gi|550338106|gb|ERP60536.1| hypothetical protein
POPTR_0005s04940g [Populus trichocarpa]
Length = 213
Score = 59.7 bits (143), Expect = 4e-07
Identities = 36/100 (36%), Positives = 51/100 (51%), Gaps = 18/100 (18%)
Frame = -2
Query: 535 EEVAEELVIMHEDFLKGNYESIEKLRRLGPIATSVAQSKKIVDYD------------SDE 392
EEVAE+L+IMHE+ L+GNY SI+KLR P + K+ VD D D+
Sbjct: 105 EEVAEKLMIMHEECLEGNYSSIQKLREAAPRTRAHQHVKQAVDSDDDSEDSGNDDKMGDD 164
Query: 391 VSEMIVDESNASDMV------VEKPKSERVPDEDGWSTVT 290
S M+VD + V P+++ EDGW+ V+
Sbjct: 165 ESNMMVDAPEFQSKMYPVNKPVNVPRAKEAQSEDGWTVVS 204
>ref|XP_006471770.1| PREDICTED: pre-rRNA-processing protein TSR2 homolog isoform X2
[Citrus sinensis]
Length = 191
Score = 59.3 bits (142), Expect = 5e-07
Identities = 40/98 (40%), Positives = 55/98 (56%), Gaps = 16/98 (16%)
Frame = -2
Query: 535 EEVAEELVIMHEDFLKGNYESIEKLRRLGPIATSVAQSKKIVDYDS---------DEVSE 383
EEVAE L++MHE+ L+GNYESI KLR P A + + ++ V+ D+ D+ S
Sbjct: 86 EEVAERLMVMHEECLEGNYESIIKLRETRPQAVAGSHIRQSVNGDNDDDDSTDDDDDSSN 145
Query: 382 MIVD--ESNASDMVVEKPKSERVPD-----EDGWSTVT 290
M+VD ESN+ V SE P EDGW+ V+
Sbjct: 146 MMVDTAESNSQSNSVNVQASEVRPSVAAEAEDGWTVVS 183
>ref|XP_006433074.1| hypothetical protein CICLE_v10002511mg [Citrus clementina]
gi|568835419|ref|XP_006471769.1| PREDICTED:
pre-rRNA-processing protein TSR2 homolog isoform X1
[Citrus sinensis] gi|557535196|gb|ESR46314.1|
hypothetical protein CICLE_v10002511mg [Citrus
clementina]
Length = 205
Score = 59.3 bits (142), Expect = 5e-07
Identities = 40/98 (40%), Positives = 55/98 (56%), Gaps = 16/98 (16%)
Frame = -2
Query: 535 EEVAEELVIMHEDFLKGNYESIEKLRRLGPIATSVAQSKKIVDYDS---------DEVSE 383
EEVAE L++MHE+ L+GNYESI KLR P A + + ++ V+ D+ D+ S
Sbjct: 100 EEVAERLMVMHEECLEGNYESIIKLRETRPQAVAGSHIRQSVNGDNDDDDSTDDDDDSSN 159
Query: 382 MIVD--ESNASDMVVEKPKSERVPD-----EDGWSTVT 290
M+VD ESN+ V SE P EDGW+ V+
Sbjct: 160 MMVDTAESNSQSNSVNVQASEVRPSVAAEAEDGWTVVS 197
>gb|EOY11156.1| Pre-rRNA-processing protein TSR2, putative [Theobroma cacao]
Length = 200
Score = 58.2 bits (139), Expect = 1e-06
Identities = 30/71 (42%), Positives = 48/71 (67%), Gaps = 2/71 (2%)
Frame = -2
Query: 535 EEVAEELVIMHEDFLKGNYESIEKLRRLG--PIATSVAQSKKIVDYDSDEVSEMIVDESN 362
EEVAE+L+IMHE+ L+GNY+S+EKLR P+A +++ D D+D+ + +D N
Sbjct: 91 EEVAEKLMIMHEECLEGNYQSVEKLRTTNPPPVAHVRPSTEEDEDDDNDDDEDDSMDADN 150
Query: 361 ASDMVVEKPKS 329
++M+V+ P S
Sbjct: 151 TTNMMVDVPNS 161