BLASTX nr result
ID: Zingiber25_contig00030031
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00030031
(769 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAB10350.1| hypothetical protein [Arabidopsis thaliana] gi|7... 96 2e-17
ref|NP_193307.2| pentatricopeptide repeat-containing protein [Ar... 96 2e-17
ref|XP_002870213.1| pentatricopeptide repeat-containing protein ... 94 5e-17
gb|EMJ26161.1| hypothetical protein PRUPE_ppa021143mg [Prunus pe... 93 1e-16
ref|XP_003609638.1| Pentatricopeptide repeat-containing protein ... 92 1e-16
ref|XP_006283356.1| hypothetical protein CARUB_v10004399mg [Caps... 92 3e-16
emb|CBI26082.3| unnamed protein product [Vitis vinifera] 92 3e-16
ref|XP_002276230.1| PREDICTED: pentatricopeptide repeat-containi... 92 3e-16
emb|CAN78051.1| hypothetical protein VITISV_015864 [Vitis vinifera] 92 3e-16
ref|XP_004513068.1| PREDICTED: pentatricopeptide repeat-containi... 90 1e-15
ref|XP_006489265.1| PREDICTED: pentatricopeptide repeat-containi... 88 3e-15
ref|XP_006419615.1| hypothetical protein CICLE_v10004576mg [Citr... 88 3e-15
ref|NP_001066232.1| Os12g0163600 [Oryza sativa Japonica Group] g... 88 3e-15
ref|XP_003529581.1| PREDICTED: pentatricopeptide repeat-containi... 88 3e-15
gb|EAY82368.1| hypothetical protein OsI_37580 [Oryza sativa Indi... 88 3e-15
ref|XP_004295496.1| PREDICTED: pentatricopeptide repeat-containi... 88 4e-15
ref|XP_002516898.1| pentatricopeptide repeat-containing protein,... 87 5e-15
ref|XP_004296321.1| PREDICTED: pentatricopeptide repeat-containi... 87 6e-15
gb|EMT32719.1| hypothetical protein F775_17327 [Aegilops tauschii] 86 2e-14
ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containi... 85 2e-14
>emb|CAB10350.1| hypothetical protein [Arabidopsis thaliana]
gi|7268320|emb|CAB78614.1| hypothetical protein
[Arabidopsis thaliana]
Length = 602
Score = 95.5 bits (236), Expect = 2e-17
Identities = 40/47 (85%), Positives = 44/47 (93%)
Frame = +2
Query: 2 MKNLRMCRDCHEALKLVSDIVEREIVVRDLNRFHLFRNGSCTCRDYW 142
M NLRMCRDCHEA KL+S+IVEREIVVRD+NRFH F+NGSCTCRDYW
Sbjct: 556 MNNLRMCRDCHEAFKLISEIVEREIVVRDVNRFHCFKNGSCTCRDYW 602
>ref|NP_193307.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75161477|sp|Q8VYH0.1|PP313_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At4g15720 gi|18175616|gb|AAL59897.1| unknown protein
[Arabidopsis thaliana] gi|20465541|gb|AAM20253.1|
unknown protein [Arabidopsis thaliana]
gi|332658240|gb|AEE83640.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 616
Score = 95.5 bits (236), Expect = 2e-17
Identities = 40/47 (85%), Positives = 44/47 (93%)
Frame = +2
Query: 2 MKNLRMCRDCHEALKLVSDIVEREIVVRDLNRFHLFRNGSCTCRDYW 142
M NLRMCRDCHEA KL+S+IVEREIVVRD+NRFH F+NGSCTCRDYW
Sbjct: 570 MNNLRMCRDCHEAFKLISEIVEREIVVRDVNRFHCFKNGSCTCRDYW 616
>ref|XP_002870213.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297316049|gb|EFH46472.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 608
Score = 94.0 bits (232), Expect = 5e-17
Identities = 39/47 (82%), Positives = 44/47 (93%)
Frame = +2
Query: 2 MKNLRMCRDCHEALKLVSDIVEREIVVRDLNRFHLFRNGSCTCRDYW 142
M NLRMCRDCHEA KL+S+IVEREIVVRD+NRFH F+NGSCTCRD+W
Sbjct: 562 MNNLRMCRDCHEAFKLISEIVEREIVVRDVNRFHCFKNGSCTCRDFW 608
>gb|EMJ26161.1| hypothetical protein PRUPE_ppa021143mg [Prunus persica]
Length = 602
Score = 92.8 bits (229), Expect = 1e-16
Identities = 39/47 (82%), Positives = 44/47 (93%)
Frame = +2
Query: 2 MKNLRMCRDCHEALKLVSDIVEREIVVRDLNRFHLFRNGSCTCRDYW 142
MKNLRMCRDCHEA KL+SDIVERE VVRD+NRFH F++GSCTCRD+W
Sbjct: 556 MKNLRMCRDCHEAFKLISDIVERECVVRDVNRFHHFKSGSCTCRDFW 602
>ref|XP_003609638.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510693|gb|AES91835.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 589
Score = 92.4 bits (228), Expect = 1e-16
Identities = 39/47 (82%), Positives = 43/47 (91%)
Frame = +2
Query: 2 MKNLRMCRDCHEALKLVSDIVEREIVVRDLNRFHLFRNGSCTCRDYW 142
MKNLRMCRDCHEA KL+SDIVERE VVRD+NRFH F+NGSCTC D+W
Sbjct: 543 MKNLRMCRDCHEAFKLISDIVEREFVVRDVNRFHHFKNGSCTCGDFW 589
>ref|XP_006283356.1| hypothetical protein CARUB_v10004399mg [Capsella rubella]
gi|482552061|gb|EOA16254.1| hypothetical protein
CARUB_v10004399mg [Capsella rubella]
Length = 612
Score = 91.7 bits (226), Expect = 3e-16
Identities = 37/47 (78%), Positives = 44/47 (93%)
Frame = +2
Query: 2 MKNLRMCRDCHEALKLVSDIVEREIVVRDLNRFHLFRNGSCTCRDYW 142
M NLRMCRDCHEA K++S+IV+REIVVRD+NRFH F+NGSCTCRD+W
Sbjct: 566 MNNLRMCRDCHEAFKVISEIVQREIVVRDVNRFHCFKNGSCTCRDFW 612
>emb|CBI26082.3| unnamed protein product [Vitis vinifera]
Length = 568
Score = 91.7 bits (226), Expect = 3e-16
Identities = 38/47 (80%), Positives = 43/47 (91%)
Frame = +2
Query: 2 MKNLRMCRDCHEALKLVSDIVEREIVVRDLNRFHLFRNGSCTCRDYW 142
MKNLRMCRDCHEA KL+S+IVER+ VVRD+NRFH F NGSCTCRD+W
Sbjct: 522 MKNLRMCRDCHEAFKLISEIVERDFVVRDVNRFHHFENGSCTCRDFW 568
>ref|XP_002276230.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g15720-like [Vitis vinifera]
Length = 606
Score = 91.7 bits (226), Expect = 3e-16
Identities = 38/47 (80%), Positives = 43/47 (91%)
Frame = +2
Query: 2 MKNLRMCRDCHEALKLVSDIVEREIVVRDLNRFHLFRNGSCTCRDYW 142
MKNLRMCRDCHEA KL+S+IVER+ VVRD+NRFH F NGSCTCRD+W
Sbjct: 560 MKNLRMCRDCHEAFKLISEIVERDFVVRDVNRFHHFENGSCTCRDFW 606
>emb|CAN78051.1| hypothetical protein VITISV_015864 [Vitis vinifera]
Length = 231
Score = 91.7 bits (226), Expect = 3e-16
Identities = 38/47 (80%), Positives = 43/47 (91%)
Frame = +2
Query: 2 MKNLRMCRDCHEALKLVSDIVEREIVVRDLNRFHLFRNGSCTCRDYW 142
MKNLRMCRDCHEA KL+S+IVER+ VVRD+NRFH F NGSCTCRD+W
Sbjct: 185 MKNLRMCRDCHEAFKLISEIVERDFVVRDVNRFHHFENGSCTCRDFW 231
>ref|XP_004513068.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g15720-like [Cicer arietinum]
Length = 605
Score = 89.7 bits (221), Expect = 1e-15
Identities = 37/47 (78%), Positives = 42/47 (89%)
Frame = +2
Query: 2 MKNLRMCRDCHEALKLVSDIVEREIVVRDLNRFHLFRNGSCTCRDYW 142
MKNLRMC DCHEA K++SDIVERE +VRDLNRFH F+NGSCTC D+W
Sbjct: 559 MKNLRMCMDCHEAFKVISDIVEREFIVRDLNRFHHFKNGSCTCGDFW 605
>ref|XP_006489265.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g15720-like [Citrus sinensis]
Length = 605
Score = 88.2 bits (217), Expect = 3e-15
Identities = 36/47 (76%), Positives = 42/47 (89%)
Frame = +2
Query: 2 MKNLRMCRDCHEALKLVSDIVEREIVVRDLNRFHLFRNGSCTCRDYW 142
MKNLRMCRDCH+ KL+SDIVER+ VVRD+NRFH FRNGSC+C D+W
Sbjct: 559 MKNLRMCRDCHDVFKLISDIVERDFVVRDVNRFHHFRNGSCSCGDFW 605
>ref|XP_006419615.1| hypothetical protein CICLE_v10004576mg [Citrus clementina]
gi|557521488|gb|ESR32855.1| hypothetical protein
CICLE_v10004576mg [Citrus clementina]
Length = 605
Score = 88.2 bits (217), Expect = 3e-15
Identities = 36/47 (76%), Positives = 42/47 (89%)
Frame = +2
Query: 2 MKNLRMCRDCHEALKLVSDIVEREIVVRDLNRFHLFRNGSCTCRDYW 142
MKNLRMCRDCH+ KL+SDIVER+ VVRD+NRFH FRNGSC+C D+W
Sbjct: 559 MKNLRMCRDCHDVFKLISDIVERDFVVRDVNRFHHFRNGSCSCGDFW 605
>ref|NP_001066232.1| Os12g0163600 [Oryza sativa Japonica Group]
gi|77553071|gb|ABA95867.1| pentatricopeptide, putative,
expressed [Oryza sativa Japonica Group]
gi|113648739|dbj|BAF29251.1| Os12g0163600 [Oryza sativa
Japonica Group] gi|125578601|gb|EAZ19747.1| hypothetical
protein OsJ_35325 [Oryza sativa Japonica Group]
gi|215695280|dbj|BAG90471.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 604
Score = 88.2 bits (217), Expect = 3e-15
Identities = 38/47 (80%), Positives = 41/47 (87%)
Frame = +2
Query: 2 MKNLRMCRDCHEALKLVSDIVEREIVVRDLNRFHLFRNGSCTCRDYW 142
MKNLRMCRDCHEA K++S IVERE VVRDLNRFH FR GSC+C DYW
Sbjct: 558 MKNLRMCRDCHEAFKVISAIVEREFVVRDLNRFHHFRMGSCSCNDYW 604
>ref|XP_003529581.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g15720-like [Glycine max]
Length = 603
Score = 88.2 bits (217), Expect = 3e-15
Identities = 37/47 (78%), Positives = 42/47 (89%)
Frame = +2
Query: 2 MKNLRMCRDCHEALKLVSDIVEREIVVRDLNRFHLFRNGSCTCRDYW 142
MKNLRMCRDCH A KL+SDIVERE+VVRD+NRFH F+NG CTC D+W
Sbjct: 557 MKNLRMCRDCHGAFKLISDIVERELVVRDVNRFHHFKNGLCTCGDFW 603
>gb|EAY82368.1| hypothetical protein OsI_37580 [Oryza sativa Indica Group]
Length = 604
Score = 88.2 bits (217), Expect = 3e-15
Identities = 38/47 (80%), Positives = 41/47 (87%)
Frame = +2
Query: 2 MKNLRMCRDCHEALKLVSDIVEREIVVRDLNRFHLFRNGSCTCRDYW 142
MKNLRMCRDCHEA K++S IVERE VVRDLNRFH FR GSC+C DYW
Sbjct: 558 MKNLRMCRDCHEAFKVISAIVEREFVVRDLNRFHHFRMGSCSCNDYW 604
>ref|XP_004295496.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g15720-like [Fragaria vesca subsp. vesca]
Length = 583
Score = 87.8 bits (216), Expect = 4e-15
Identities = 36/47 (76%), Positives = 41/47 (87%)
Frame = +2
Query: 2 MKNLRMCRDCHEALKLVSDIVEREIVVRDLNRFHLFRNGSCTCRDYW 142
MKNLRMC DCHEA KL+SDIV RE +VRD+NRFH F+ GSCTCRD+W
Sbjct: 537 MKNLRMCNDCHEAFKLISDIVGREFIVRDVNRFHHFKGGSCTCRDFW 583
>ref|XP_002516898.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223543986|gb|EEF45512.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 406
Score = 87.4 bits (215), Expect = 5e-15
Identities = 36/47 (76%), Positives = 42/47 (89%)
Frame = +2
Query: 2 MKNLRMCRDCHEALKLVSDIVEREIVVRDLNRFHLFRNGSCTCRDYW 142
MKNLRMC+DCHEA KL+S IVER+ VVRD+NRFH F NGSC+CRD+W
Sbjct: 360 MKNLRMCKDCHEAFKLISGIVERDFVVRDINRFHHFDNGSCSCRDFW 406
>ref|XP_004296321.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 465
Score = 87.0 bits (214), Expect = 6e-15
Identities = 37/47 (78%), Positives = 41/47 (87%)
Frame = +2
Query: 2 MKNLRMCRDCHEALKLVSDIVEREIVVRDLNRFHLFRNGSCTCRDYW 142
MKNLR+C DCH ALKLVS+I EREIVVRD NRFH F+NG C+CRDYW
Sbjct: 419 MKNLRVCEDCHAALKLVSEIAEREIVVRDRNRFHCFKNGYCSCRDYW 465
>gb|EMT32719.1| hypothetical protein F775_17327 [Aegilops tauschii]
Length = 547
Score = 85.5 bits (210), Expect = 2e-14
Identities = 36/47 (76%), Positives = 41/47 (87%)
Frame = +2
Query: 2 MKNLRMCRDCHEALKLVSDIVEREIVVRDLNRFHLFRNGSCTCRDYW 142
MKNLRMC DCH+A KL+SDI+ERE VVRDLNRFH F+ GSC+C DYW
Sbjct: 501 MKNLRMCCDCHDAFKLISDIMEREFVVRDLNRFHHFKLGSCSCNDYW 547
>ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 877
Score = 85.1 bits (209), Expect = 2e-14
Identities = 33/46 (71%), Positives = 41/46 (89%)
Frame = +2
Query: 5 KNLRMCRDCHEALKLVSDIVEREIVVRDLNRFHLFRNGSCTCRDYW 142
KNLR+CRDCH A K +SDIV REI++RD+NRFH FR+G+C+CRDYW
Sbjct: 832 KNLRICRDCHAAFKFISDIVSREIIIRDINRFHHFRDGACSCRDYW 877