BLASTX nr result

ID: Zingiber25_contig00029885 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00029885
         (652 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006369502.1| hypothetical protein POPTR_0001s24040g [Popu...    59   2e-06
gb|EXB53239.1| Nuclear factor related to kappa-B-binding protein...    58   2e-06
ref|XP_002313459.2| hypothetical protein POPTR_0009s03120g [Popu...    57   5e-06

>ref|XP_006369502.1| hypothetical protein POPTR_0001s24040g [Populus trichocarpa]
            gi|566150688|ref|XP_002298386.2| hypothetical protein
            POPTR_0001s24040g [Populus trichocarpa]
            gi|550348052|gb|ERP66071.1| hypothetical protein
            POPTR_0001s24040g [Populus trichocarpa]
            gi|550348053|gb|EEE83191.2| hypothetical protein
            POPTR_0001s24040g [Populus trichocarpa]
          Length = 1416

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 31/70 (44%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
 Frame = +1

Query: 1    VLTSPIRAAAEDAGLNIDNANAFIDSTTITKDRGNWEGLALNPLRQDRLICQENST-DDF 177
            ++ S +R  AED   NID ++     +T   D   W+ L+LNPL+++++ICQENST +DF
Sbjct: 1341 LVCSDVRHNAED---NIDTSHGPKQGSTYDGDAMVWDALSLNPLQENKVICQENSTNEDF 1397

Query: 178  DDGTFGQEQP 207
            DD TF +E+P
Sbjct: 1398 DDETFERERP 1407


>gb|EXB53239.1| Nuclear factor related to kappa-B-binding protein [Morus notabilis]
          Length = 1378

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 24/36 (66%), Positives = 33/36 (91%), Gaps = 1/36 (2%)
 Frame = +1

Query: 106  WEGLALNPLRQDRLICQENST-DDFDDGTFGQEQPI 210
            WEGL LNP+R+++L+CQENST +DFDD TFG+E+P+
Sbjct: 1335 WEGLDLNPIRENKLLCQENSTNEDFDDETFGRERPV 1370


>ref|XP_002313459.2| hypothetical protein POPTR_0009s03120g [Populus trichocarpa]
            gi|566186047|ref|XP_006379006.1| hypothetical protein
            POPTR_0009s03120g [Populus trichocarpa]
            gi|550330929|gb|EEE87414.2| hypothetical protein
            POPTR_0009s03120g [Populus trichocarpa]
            gi|550330930|gb|ERP56803.1| hypothetical protein
            POPTR_0009s03120g [Populus trichocarpa]
          Length = 1404

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 29/70 (41%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
 Frame = +1

Query: 1    VLTSPIRAAAEDAGLNIDNANAFIDSTTITKDRGNWEGLALNPLRQDRLICQENST-DDF 177
            ++ S +R +AED    +D  +     +T   +   WE L+LNPL +++LICQE+ST +DF
Sbjct: 1329 LVCSDVRQSAEDT---VDTTHGLQQGSTYQGESMVWEALSLNPLEENKLICQEDSTNEDF 1385

Query: 178  DDGTFGQEQP 207
            DD TF +E+P
Sbjct: 1386 DDETFERERP 1395


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