BLASTX nr result
ID: Zingiber25_contig00029786
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00029786
(391 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN67915.1| hypothetical protein VITISV_027926 [Vitis vinifera] 65 6e-22
emb|CAN77045.1| hypothetical protein VITISV_035256 [Vitis vinifera] 62 1e-19
gb|EMJ09180.1| hypothetical protein PRUPE_ppa015715mg, partial [... 59 5e-19
gb|EMJ22948.1| hypothetical protein PRUPE_ppb022800mg, partial [... 60 3e-18
gb|EMJ22494.1| hypothetical protein PRUPE_ppa024499mg, partial [... 57 3e-18
emb|CAN69890.1| hypothetical protein VITISV_005077 [Vitis vinifera] 66 5e-17
emb|CAN71532.1| hypothetical protein VITISV_018180 [Vitis vinifera] 60 8e-17
emb|CAN79389.1| hypothetical protein VITISV_004909 [Vitis vinifera] 59 6e-16
gb|EMJ08022.1| hypothetical protein PRUPE_ppa025991mg [Prunus pe... 54 8e-16
gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana] 62 2e-15
gb|AAU90169.1| putative polyprotein [Oryza sativa Japonica Group] 59 5e-15
gb|AAD17351.1| contains similarity to retrovirus-related polypro... 61 5e-15
emb|CAN74420.1| hypothetical protein VITISV_024222 [Vitis vinifera] 55 5e-15
gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group] 62 6e-15
ref|NP_001063540.1| Os09g0491900 [Oryza sativa Japonica Group] g... 62 7e-15
gb|AAT85159.1| unknown protein [Oryza sativa Japonica Group] gi|... 62 7e-15
gb|AAQ56338.1| putative gag-pol polyprotein [Oryza sativa Japoni... 59 1e-14
ref|XP_002265792.1| PREDICTED: uncharacterized protein LOC100243... 50 2e-14
gb|AAX14649.1| gag-pol polyprotein [Setaria pumila] 58 3e-14
gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sa... 60 4e-14
>emb|CAN67915.1| hypothetical protein VITISV_027926 [Vitis vinifera]
Length = 551
Score = 64.7 bits (156), Expect(4) = 6e-22
Identities = 30/47 (63%), Positives = 36/47 (76%)
Frame = -3
Query: 254 TIFVVVGHFSKTMHIIPCLKSSNVVHIAMLFFNEVVHLHGLPLIIVS 114
+IFVVV FSK +H IPC K+ +VVH+A LFF E+V LHGLP IVS
Sbjct: 439 SIFVVVDRFSKMVHFIPCSKTLDVVHVAKLFFKEIVRLHGLPKTIVS 485
Score = 41.6 bits (96), Expect(4) = 6e-22
Identities = 17/25 (68%), Positives = 20/25 (80%)
Frame = -1
Query: 109 DRDVKLTSYFW*TLWKITNIKLKFS 35
D+D K SYFW +LWK+ NIKLKFS
Sbjct: 486 DQDAKFMSYFWRSLWKMLNIKLKFS 510
Score = 37.0 bits (84), Expect(4) = 6e-22
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = -2
Query: 330 PLLHKPWQDLSMNFVPSLPRTI**HDYI 247
P+ H+PWQDLS +FV LP+T HD I
Sbjct: 413 PVPHEPWQDLSTDFVLGLPKTFKGHDSI 440
Score = 25.8 bits (55), Expect(4) = 6e-22
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -1
Query: 388 ISRCRKC*LSKGRMK 344
+S+CR C LSKGR K
Sbjct: 390 VSKCRTCQLSKGRKK 404
>emb|CAN77045.1| hypothetical protein VITISV_035256 [Vitis vinifera]
Length = 665
Score = 62.0 bits (149), Expect(4) = 1e-19
Identities = 28/47 (59%), Positives = 35/47 (74%)
Frame = -3
Query: 254 TIFVVVGHFSKTMHIIPCLKSSNVVHIAMLFFNEVVHLHGLPLIIVS 114
+IFV+V FSK +H IPC K+ + VH+A LFF E+V LHGLP IVS
Sbjct: 442 SIFVMVDRFSKMVHFIPCSKTLDAVHVAKLFFKEIVRLHGLPKTIVS 488
Score = 39.7 bits (91), Expect(4) = 1e-19
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = -1
Query: 109 DRDVKLTSYFW*TLWKITNIKLKFS 35
D+D K SYFW +LWK+ N KLKFS
Sbjct: 489 DQDAKFMSYFWRSLWKMLNTKLKFS 513
Score = 36.2 bits (82), Expect(4) = 1e-19
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = -2
Query: 330 PLLHKPWQDLSMNFVPSLPRTI**HDYI 247
P+ H+PWQ+LS++FV LP+T HD I
Sbjct: 416 PVPHEPWQELSIDFVLGLPKTFRRHDSI 443
Score = 23.1 bits (48), Expect(4) = 1e-19
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -1
Query: 388 ISRCRKC*LSKGRMK 344
+S+CR C SKGR K
Sbjct: 393 VSKCRTCQPSKGRKK 407
>gb|EMJ09180.1| hypothetical protein PRUPE_ppa015715mg, partial [Prunus persica]
Length = 1445
Score = 59.3 bits (142), Expect(5) = 5e-19
Identities = 26/47 (55%), Positives = 35/47 (74%)
Frame = -3
Query: 254 TIFVVVGHFSKTMHIIPCLKSSNVVHIAMLFFNEVVHLHGLPLIIVS 114
+IFV+V FSK H +PC K+++ ++A LFF EVV LHGLP+ IVS
Sbjct: 1077 SIFVIVDRFSKMAHFLPCAKNTDASYVAKLFFKEVVRLHGLPVSIVS 1123
Score = 40.0 bits (92), Expect(5) = 5e-19
Identities = 17/25 (68%), Positives = 18/25 (72%)
Frame = -1
Query: 109 DRDVKLTSYFW*TLWKITNIKLKFS 35
DRDVK SYFW TLWK+ LKFS
Sbjct: 1124 DRDVKFVSYFWKTLWKLFGTTLKFS 1148
Score = 34.3 bits (77), Expect(5) = 5e-19
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = -2
Query: 330 PLLHKPWQDLSMNFVPSLPRT 268
P+ H PW+DLSM+FV LP+T
Sbjct: 1051 PIPHTPWKDLSMDFVLGLPKT 1071
Score = 22.3 bits (46), Expect(5) = 5e-19
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -2
Query: 30 FHPQPDGQIE 1
FHPQ DGQ E
Sbjct: 1151 FHPQTDGQTE 1160
Score = 21.9 bits (45), Expect(5) = 5e-19
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -1
Query: 391 MISRCRKC*LSKGRMK 344
+IS+CR C L+K R +
Sbjct: 1027 LISQCRTCQLAKARKR 1042
>gb|EMJ22948.1| hypothetical protein PRUPE_ppb022800mg, partial [Prunus persica]
Length = 722
Score = 59.7 bits (143), Expect(3) = 3e-18
Identities = 26/47 (55%), Positives = 35/47 (74%)
Frame = -3
Query: 254 TIFVVVGHFSKTMHIIPCLKSSNVVHIAMLFFNEVVHLHGLPLIIVS 114
+I VVV FSK H +PC K+++ ++A LFF EV+HLHGLP+ IVS
Sbjct: 361 SILVVVDRFSKMAHFLPCSKAADASYVAKLFFKEVIHLHGLPVSIVS 407
Score = 40.4 bits (93), Expect(3) = 3e-18
Identities = 17/25 (68%), Positives = 18/25 (72%)
Frame = -1
Query: 109 DRDVKLTSYFW*TLWKITNIKLKFS 35
DRDVK SYFW TLWK+ LKFS
Sbjct: 408 DRDVKFVSYFWKTLWKLFGTSLKFS 432
Score = 37.0 bits (84), Expect(3) = 3e-18
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = -2
Query: 330 PLLHKPWQDLSMNFVPSLPRTI**HDYI 247
P+ H PW+DLSM+FV LP+T HD I
Sbjct: 335 PIPHTPWKDLSMDFVLGLPKTARGHDSI 362
>gb|EMJ22494.1| hypothetical protein PRUPE_ppa024499mg, partial [Prunus persica]
Length = 1364
Score = 56.6 bits (135), Expect(4) = 3e-18
Identities = 25/47 (53%), Positives = 34/47 (72%)
Frame = -3
Query: 254 TIFVVVGHFSKTMHIIPCLKSSNVVHIAMLFFNEVVHLHGLPLIIVS 114
+I VVV FSK H +PC K+++ ++A LFF EV+ LHGLP+ IVS
Sbjct: 1088 SILVVVDRFSKMAHFLPCSKAADASYVAKLFFKEVIRLHGLPVSIVS 1134
Score = 40.4 bits (93), Expect(4) = 3e-18
Identities = 17/25 (68%), Positives = 18/25 (72%)
Frame = -1
Query: 109 DRDVKLTSYFW*TLWKITNIKLKFS 35
DRDVK SYFW TLWK+ LKFS
Sbjct: 1135 DRDVKFVSYFWKTLWKLFGTSLKFS 1159
Score = 37.0 bits (84), Expect(4) = 3e-18
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = -2
Query: 330 PLLHKPWQDLSMNFVPSLPRTI**HDYI 247
P+ H PW+DLSM+FV LP+T HD I
Sbjct: 1062 PIPHTPWKDLSMDFVLGLPKTARGHDSI 1089
Score = 22.3 bits (46), Expect(4) = 3e-18
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -2
Query: 30 FHPQPDGQIE 1
FHPQ DGQ E
Sbjct: 1162 FHPQTDGQTE 1171
>emb|CAN69890.1| hypothetical protein VITISV_005077 [Vitis vinifera]
Length = 552
Score = 65.9 bits (159), Expect(5) = 5e-17
Identities = 30/47 (63%), Positives = 36/47 (76%)
Frame = -3
Query: 254 TIFVVVGHFSKTMHIIPCLKSSNVVHIAMLFFNEVVHLHGLPLIIVS 114
+IF +V HFSKT+H IPC K+ NVVH+A LFF E+V L GLP IVS
Sbjct: 434 SIFXMVDHFSKTVHFIPCSKTLNVVHVAKLFFKEIVRLQGLPKTIVS 480
Score = 31.2 bits (69), Expect(5) = 5e-17
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = -1
Query: 109 DRDVKLTSYFW*TLWKITNIKLKFS 35
++D + SYFW +L K+ N KLKFS
Sbjct: 481 NQDANIMSYFWRSLRKMLNTKLKFS 505
Score = 28.9 bits (63), Expect(5) = 5e-17
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -2
Query: 321 HKPWQDLSMNFVPSLPRTI**HDYI 247
+KPWQDLSM+ P+T HD I
Sbjct: 411 YKPWQDLSMDCXFGSPKTFRGHDSI 435
Score = 23.1 bits (48), Expect(5) = 5e-17
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -1
Query: 388 ISRCRKC*LSKGRMK 344
+S+CR C LSKG K
Sbjct: 385 VSKCRTCQLSKGGKK 399
Score = 21.9 bits (45), Expect(5) = 5e-17
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -2
Query: 30 FHPQPDGQIE 1
FHPQ D QIE
Sbjct: 508 FHPQTDSQIE 517
>emb|CAN71532.1| hypothetical protein VITISV_018180 [Vitis vinifera]
Length = 1323
Score = 60.5 bits (145), Expect(4) = 8e-17
Identities = 29/47 (61%), Positives = 33/47 (70%)
Frame = -3
Query: 254 TIFVVVGHFSKTMHIIPCLKSSNVVHIAMLFFNEVVHLHGLPLIIVS 114
+IFVVV FSK H IPC K+SN ++ LFF EVV LHGLP IVS
Sbjct: 958 SIFVVVDRFSKMTHFIPCKKTSNASYVTALFFKEVVQLHGLPQSIVS 1004
Score = 34.3 bits (77), Expect(4) = 8e-17
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = -2
Query: 330 PLLHKPWQDLSMNFVPSLPRT 268
P+ KPW+DLSM+FV LPRT
Sbjct: 932 PVPFKPWEDLSMDFVLGLPRT 952
Score = 34.3 bits (77), Expect(4) = 8e-17
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = -1
Query: 109 DRDVKLTSYFW*TLWKITNIKLKFS 35
+RDVK SYFW TLW +LKFS
Sbjct: 1005 NRDVKFMSYFWKTLWVKLGTQLKFS 1029
Score = 22.3 bits (46), Expect(4) = 8e-17
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -2
Query: 30 FHPQPDGQIE 1
FHPQ DGQ E
Sbjct: 1032 FHPQTDGQTE 1041
>emb|CAN79389.1| hypothetical protein VITISV_004909 [Vitis vinifera]
Length = 895
Score = 59.3 bits (142), Expect(4) = 6e-16
Identities = 31/57 (54%), Positives = 37/57 (64%)
Frame = -3
Query: 281 RCPEPFDDMTIFVVVGHFSKTMHIIPCLKSSNVVHIAMLFFNEVVHLHGLPLIIVSF 111
R FD +IFVVV FSK H IPC K+S+ ++A LFF EVV LHGLP IV +
Sbjct: 524 RAQRGFD--SIFVVVDRFSKMTHFIPCKKASDASYVAALFFKEVVRLHGLPQSIVFY 578
Score = 33.9 bits (76), Expect(4) = 6e-16
Identities = 15/27 (55%), Positives = 17/27 (62%)
Frame = -1
Query: 115 LFDRDVKLTSYFW*TLWKITNIKLKFS 35
+F RDV SYFW TLW +LKFS
Sbjct: 576 VFYRDVNFMSYFWKTLWAKLGAQLKFS 602
Score = 32.7 bits (73), Expect(4) = 6e-16
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = -2
Query: 330 PLLHKPWQDLSMNFVPSLPR 271
P+ KPW+DLSM+FV LPR
Sbjct: 505 PIPSKPWEDLSMDFVLGLPR 524
Score = 22.3 bits (46), Expect(4) = 6e-16
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -2
Query: 30 FHPQPDGQIE 1
FHPQ DGQ E
Sbjct: 605 FHPQTDGQTE 614
>gb|EMJ08022.1| hypothetical protein PRUPE_ppa025991mg [Prunus persica]
Length = 1274
Score = 53.5 bits (127), Expect(4) = 8e-16
Identities = 25/47 (53%), Positives = 34/47 (72%)
Frame = -3
Query: 254 TIFVVVGHFSKTMHIIPCLKSSNVVHIAMLFFNEVVHLHGLPLIIVS 114
+IFV+V FSK H +PC K+++ ++A LFF EVV LHGL + IVS
Sbjct: 906 SIFVIVDCFSKMAHFLPCAKNTDASYMAKLFFKEVVRLHGLLVSIVS 952
Score = 38.1 bits (87), Expect(4) = 8e-16
Identities = 16/25 (64%), Positives = 17/25 (68%)
Frame = -1
Query: 109 DRDVKLTSYFW*TLWKITNIKLKFS 35
DRD K SYFW TLWK+ LKFS
Sbjct: 953 DRDFKFVSYFWKTLWKLFGTTLKFS 977
Score = 34.3 bits (77), Expect(4) = 8e-16
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = -2
Query: 330 PLLHKPWQDLSMNFVPSLPRT 268
P+ H PW+DLSM+FV LP+T
Sbjct: 880 PIPHAPWKDLSMDFVLGLPKT 900
Score = 21.9 bits (45), Expect(4) = 8e-16
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -1
Query: 391 MISRCRKC*LSKGRMK 344
+IS+CR C L+K R +
Sbjct: 856 LISQCRTCQLAKARKR 871
>gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]
Length = 1887
Score = 62.0 bits (149), Expect(3) = 2e-15
Identities = 29/47 (61%), Positives = 34/47 (72%)
Frame = -3
Query: 254 TIFVVVGHFSKTMHIIPCLKSSNVVHIAMLFFNEVVHLHGLPLIIVS 114
+IFVVV FSK H IPC K+ + +HIA LFF EVV LHG+P IVS
Sbjct: 1475 SIFVVVDRFSKMAHFIPCHKTDDAIHIANLFFREVVRLHGMPKTIVS 1521
Score = 34.3 bits (77), Expect(3) = 2e-15
Identities = 15/25 (60%), Positives = 15/25 (60%)
Frame = -1
Query: 109 DRDVKLTSYFW*TLWKITNIKLKFS 35
DRD K SYFW TLW KL FS
Sbjct: 1522 DRDTKFLSYFWKTLWSKLGTKLLFS 1546
Score = 31.2 bits (69), Expect(3) = 2e-15
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -2
Query: 330 PLLHKPWQDLSMNFVPSLPRT 268
P+ PW D+SM+FV LPRT
Sbjct: 1449 PIPSHPWNDISMDFVVGLPRT 1469
>gb|AAU90169.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1154
Score = 58.5 bits (140), Expect(3) = 5e-15
Identities = 28/47 (59%), Positives = 32/47 (68%)
Frame = -3
Query: 254 TIFVVVGHFSKTMHIIPCLKSSNVVHIAMLFFNEVVHLHGLPLIIVS 114
+IFV V FSK H IPC KS + H+A LFF EVV LHG+P IVS
Sbjct: 886 SIFVAVDRFSKMAHFIPCNKSDDASHVADLFFREVVRLHGVPRTIVS 932
Score = 35.4 bits (80), Expect(3) = 5e-15
Identities = 16/25 (64%), Positives = 16/25 (64%)
Frame = -1
Query: 109 DRDVKLTSYFW*TLWKITNIKLKFS 35
DRDVK SYFW TLW KL FS
Sbjct: 933 DRDVKFMSYFWKTLWAKLGTKLLFS 957
Score = 32.0 bits (71), Expect(3) = 5e-15
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = -2
Query: 330 PLLHKPWQDLSMNFVPSLPRT 268
P+ + PW+D+SM+FV LPRT
Sbjct: 860 PVPNAPWEDISMDFVLGLPRT 880
>gb|AAD17351.1| contains similarity to retrovirus-related polyproteins and to CCHC
zinc finger protein (Pfam: PF00098, Score=16.3, E=0.051,
E= 1) [Arabidopsis thaliana] gi|7267432|emb|CAB77944.1|
putative polyprotein [Arabidopsis thaliana]
Length = 1138
Score = 61.2 bits (147), Expect(3) = 5e-15
Identities = 29/47 (61%), Positives = 34/47 (72%)
Frame = -3
Query: 254 TIFVVVGHFSKTMHIIPCLKSSNVVHIAMLFFNEVVHLHGLPLIIVS 114
+IFVVV FSK H IPC K+ + +HIA LFF EVV LHG+P IVS
Sbjct: 850 SIFVVVDRFSKMAHFIPCHKTDDAMHIANLFFREVVRLHGMPKTIVS 896
Score = 34.3 bits (77), Expect(3) = 5e-15
Identities = 15/25 (60%), Positives = 15/25 (60%)
Frame = -1
Query: 109 DRDVKLTSYFW*TLWKITNIKLKFS 35
DRD K SYFW TLW KL FS
Sbjct: 897 DRDTKFLSYFWKTLWSKLGTKLLFS 921
Score = 30.4 bits (67), Expect(3) = 5e-15
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -2
Query: 330 PLLHKPWQDLSMNFVPSLPRT 268
P+ PW D+SM+FV LPRT
Sbjct: 824 PIPLHPWNDISMDFVVGLPRT 844
>emb|CAN74420.1| hypothetical protein VITISV_024222 [Vitis vinifera]
Length = 549
Score = 55.5 bits (132), Expect(4) = 5e-15
Identities = 28/47 (59%), Positives = 33/47 (70%)
Frame = -3
Query: 254 TIFVVVGHFSKTMHIIPCLKSSNVVHIAMLFFNEVVHLHGLPLIIVS 114
+IFVVV FSK H IP K+S+ ++A LFF EVV LHGLP IVS
Sbjct: 408 SIFVVVDRFSKMTHFIPRKKASDASYVAALFFKEVVRLHGLPQSIVS 454
Score = 36.6 bits (83), Expect(4) = 5e-15
Identities = 16/25 (64%), Positives = 17/25 (68%)
Frame = -1
Query: 109 DRDVKLTSYFW*TLWKITNIKLKFS 35
DRDVK SYFW TLW +LKFS
Sbjct: 455 DRDVKFMSYFWKTLWAKLGTQLKFS 479
Score = 32.3 bits (72), Expect(4) = 5e-15
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = -2
Query: 330 PLLHKPWQDLSMNFVPSLPRT 268
P+ KPW+DLSM+FV LP T
Sbjct: 382 PIPSKPWEDLSMDFVLGLPMT 402
Score = 20.8 bits (42), Expect(4) = 5e-15
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -2
Query: 30 FHPQPDGQ 7
FHPQ DGQ
Sbjct: 482 FHPQTDGQ 489
>gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1713
Score = 61.6 bits (148), Expect(3) = 6e-15
Identities = 29/47 (61%), Positives = 34/47 (72%)
Frame = -3
Query: 254 TIFVVVGHFSKTMHIIPCLKSSNVVHIAMLFFNEVVHLHGLPLIIVS 114
+IFVVV FSK H IPC KS + HIA LFF+E+V LHG+P IVS
Sbjct: 1287 SIFVVVDRFSKMAHFIPCHKSDDASHIASLFFSEIVRLHGMPKTIVS 1333
Score = 32.7 bits (73), Expect(3) = 6e-15
Identities = 14/25 (56%), Positives = 15/25 (60%)
Frame = -1
Query: 109 DRDVKLTSYFW*TLWKITNIKLKFS 35
DRD K SYFW TLW +L FS
Sbjct: 1334 DRDTKFLSYFWKTLWAKLGTRLLFS 1358
Score = 31.2 bits (69), Expect(3) = 6e-15
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = -2
Query: 330 PLLHKPWQDLSMNFVPSLPRT 268
P+ PW+D+SM+FV LPRT
Sbjct: 1261 PVPSAPWEDISMDFVLGLPRT 1281
>ref|NP_001063540.1| Os09g0491900 [Oryza sativa Japonica Group]
gi|113631773|dbj|BAF25454.1| Os09g0491900 [Oryza sativa
Japonica Group]
Length = 681
Score = 61.6 bits (148), Expect(3) = 7e-15
Identities = 29/47 (61%), Positives = 34/47 (72%)
Frame = -3
Query: 254 TIFVVVGHFSKTMHIIPCLKSSNVVHIAMLFFNEVVHLHGLPLIIVS 114
+IFVVV FSK H IPC KS + HIA LFF+E+V LHG+P IVS
Sbjct: 255 SIFVVVDRFSKMAHFIPCHKSDDASHIASLFFSEIVRLHGMPKTIVS 301
Score = 32.7 bits (73), Expect(3) = 7e-15
Identities = 14/25 (56%), Positives = 15/25 (60%)
Frame = -1
Query: 109 DRDVKLTSYFW*TLWKITNIKLKFS 35
DRD K SYFW TLW +L FS
Sbjct: 302 DRDTKFLSYFWKTLWAKLGTRLLFS 326
Score = 31.2 bits (69), Expect(3) = 7e-15
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = -2
Query: 330 PLLHKPWQDLSMNFVPSLPRT 268
P+ PW+D+SM+FV LPRT
Sbjct: 229 PVPSAPWEDISMDFVLGLPRT 249
>gb|AAT85159.1| unknown protein [Oryza sativa Japonica Group]
gi|52353557|gb|AAU44123.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 681
Score = 61.6 bits (148), Expect(3) = 7e-15
Identities = 29/47 (61%), Positives = 34/47 (72%)
Frame = -3
Query: 254 TIFVVVGHFSKTMHIIPCLKSSNVVHIAMLFFNEVVHLHGLPLIIVS 114
+IFVVV FSK H IPC KS + HIA LFF+E+V LHG+P IVS
Sbjct: 255 SIFVVVDRFSKMAHFIPCHKSDDASHIASLFFSEIVRLHGMPKTIVS 301
Score = 32.7 bits (73), Expect(3) = 7e-15
Identities = 14/25 (56%), Positives = 15/25 (60%)
Frame = -1
Query: 109 DRDVKLTSYFW*TLWKITNIKLKFS 35
DRD K SYFW TLW +L FS
Sbjct: 302 DRDTKFLSYFWKTLWAKLGTRLLFS 326
Score = 31.2 bits (69), Expect(3) = 7e-15
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = -2
Query: 330 PLLHKPWQDLSMNFVPSLPRT 268
P+ PW+D+SM+FV LPRT
Sbjct: 229 PVPSAPWEDISMDFVLGLPRT 249
>gb|AAQ56338.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1619
Score = 59.3 bits (142), Expect(4) = 1e-14
Identities = 28/47 (59%), Positives = 34/47 (72%)
Frame = -3
Query: 254 TIFVVVGHFSKTMHIIPCLKSSNVVHIAMLFFNEVVHLHGLPLIIVS 114
+IFVVV FSK +H IPC K+ + HIA LFF E+V LHG+P IVS
Sbjct: 1263 SIFVVVDRFSKMVHFIPCHKTDDASHIADLFFREIVRLHGVPNTIVS 1309
Score = 32.0 bits (71), Expect(4) = 1e-14
Identities = 14/25 (56%), Positives = 15/25 (60%)
Frame = -1
Query: 109 DRDVKLTSYFW*TLWKITNIKLKFS 35
DRD K S+FW TLW KL FS
Sbjct: 1310 DRDTKFLSHFWRTLWAKLGTKLLFS 1334
Score = 30.4 bits (67), Expect(4) = 1e-14
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = -2
Query: 330 PLLHKPWQDLSMNFVPSLPRT 268
P+ PW+D+SM+FV LPRT
Sbjct: 1237 PVPTVPWEDISMDFVLGLPRT 1257
Score = 21.9 bits (45), Expect(4) = 1e-14
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -2
Query: 27 HPQPDGQIE 1
HPQ DGQIE
Sbjct: 1338 HPQTDGQIE 1346
>ref|XP_002265792.1| PREDICTED: uncharacterized protein LOC100243318 [Vitis vinifera]
Length = 623
Score = 50.1 bits (118), Expect(4) = 2e-14
Identities = 25/47 (53%), Positives = 30/47 (63%)
Frame = -3
Query: 254 TIFVVVGHFSKTMHIIPCLKSSNVVHIAMLFFNEVVHLHGLPLIIVS 114
+I VVV FSK H IPC K+ +V A LF EV+ LHG+P IVS
Sbjct: 366 SIMVVVDRFSKMTHFIPCHKTYDVSKTAALFLQEVIRLHGVPAPIVS 412
Score = 35.4 bits (80), Expect(4) = 2e-14
Identities = 16/25 (64%), Positives = 16/25 (64%)
Frame = -1
Query: 109 DRDVKLTSYFW*TLWKITNIKLKFS 35
DRDVK SYFW TLW KL FS
Sbjct: 413 DRDVKFMSYFWKTLWARMGTKLLFS 437
Score = 35.0 bits (79), Expect(4) = 2e-14
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = -2
Query: 330 PLLHKPWQDLSMNFVPSLPRTI**HDYI 247
P+ KPWQ +SM+FV LP+T+ HD I
Sbjct: 340 PIPDKPWQHISMDFVLGLPKTLRQHDSI 367
Score = 22.3 bits (46), Expect(4) = 2e-14
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -2
Query: 30 FHPQPDGQIE 1
FHPQ DGQ E
Sbjct: 440 FHPQTDGQTE 449
>gb|AAX14649.1| gag-pol polyprotein [Setaria pumila]
Length = 185
Score = 58.2 bits (139), Expect(3) = 3e-14
Identities = 27/47 (57%), Positives = 33/47 (70%)
Frame = -3
Query: 254 TIFVVVGHFSKTMHIIPCLKSSNVVHIAMLFFNEVVHLHGLPLIIVS 114
++FVVV FSK H IPC K+ + HIA LFF E+V LHG+P IVS
Sbjct: 100 SVFVVVDRFSKMAHFIPCHKTDDAPHIADLFFREIVRLHGVPNTIVS 146
Score = 33.5 bits (75), Expect(3) = 3e-14
Identities = 15/25 (60%), Positives = 15/25 (60%)
Frame = -1
Query: 109 DRDVKLTSYFW*TLWKITNIKLKFS 35
DRDVK SYFW LW KL FS
Sbjct: 147 DRDVKFLSYFWKALWAKLGTKLLFS 171
Score = 31.6 bits (70), Expect(3) = 3e-14
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = -2
Query: 330 PLLHKPWQDLSMNFVPSLPRT 268
P+ PW+D+SM+FV LPRT
Sbjct: 74 PVPSAPWEDISMDFVMGLPRT 94
>gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|15217296|gb|AAK92640.1|AC079634_1 Putative
retroelement [Oryza sativa Japonica Group]
gi|31431373|gb|AAP53161.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 1708
Score = 60.1 bits (144), Expect(3) = 4e-14
Identities = 28/47 (59%), Positives = 33/47 (70%)
Frame = -3
Query: 254 TIFVVVGHFSKTMHIIPCLKSSNVVHIAMLFFNEVVHLHGLPLIIVS 114
+IFVVV FSK H IPC KS + H+A LFF E+V LHG+P IVS
Sbjct: 1312 SIFVVVDRFSKMAHFIPCHKSDDATHVADLFFREIVRLHGVPNTIVS 1358
Score = 32.0 bits (71), Expect(3) = 4e-14
Identities = 14/25 (56%), Positives = 15/25 (60%)
Frame = -1
Query: 109 DRDVKLTSYFW*TLWKITNIKLKFS 35
DRD K S+FW TLW KL FS
Sbjct: 1359 DRDTKFLSHFWRTLWAKLGTKLLFS 1383
Score = 30.8 bits (68), Expect(3) = 4e-14
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = -2
Query: 330 PLLHKPWQDLSMNFVPSLPRT 268
P+ PW+D+SM+FV LPRT
Sbjct: 1286 PVPSVPWEDISMDFVLGLPRT 1306