BLASTX nr result
ID: Zingiber25_contig00029712
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00029712
(520 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOX93311.1| RNA-binding family protein isoform 1 [Theobroma c... 152 6e-35
ref|XP_006357956.1| PREDICTED: glycine-rich RNA-binding protein ... 150 2e-34
gb|EXB37811.1| Glycine-rich RNA-binding protein 2 [Morus notabilis] 149 3e-34
ref|XP_004243523.1| PREDICTED: glycine-rich RNA-binding protein ... 149 4e-34
ref|XP_002525321.1| glycine-rich RNA-binding protein, putative [... 148 6e-34
ref|XP_003601384.1| Glycine-rich RNA-binding protein [Medicago t... 148 8e-34
ref|XP_004502036.1| PREDICTED: RNA-binding protein Musashi homol... 147 1e-33
ref|XP_002273998.1| PREDICTED: glycine-rich RNA-binding protein ... 146 3e-33
ref|XP_006846342.1| hypothetical protein AMTR_s00012p00258090 [A... 145 4e-33
ref|XP_004151901.1| PREDICTED: glycine-rich RNA-binding protein ... 145 4e-33
ref|XP_003528518.1| PREDICTED: glycine-rich RNA-binding protein ... 144 2e-32
ref|XP_002321147.1| predicted protein [Populus trichocarpa] 144 2e-32
ref|XP_004305987.1| PREDICTED: glycine-rich RNA-binding protein ... 143 2e-32
ref|XP_006447631.1| hypothetical protein CICLE_v10017091mg [Citr... 143 3e-32
ref|XP_004971023.1| PREDICTED: glycine-rich RNA-binding protein ... 142 6e-32
ref|XP_004971022.1| PREDICTED: glycine-rich RNA-binding protein ... 142 6e-32
ref|XP_003567391.1| PREDICTED: glycine-rich RNA-binding protein ... 141 1e-31
ref|NP_001130982.1| hypothetical protein [Zea mays] gi|194690622... 140 2e-31
ref|NP_187457.1| RNA recognition motif-containing protein [Arabi... 138 9e-31
ref|XP_006298743.1| hypothetical protein CARUB_v10014853mg [Caps... 137 2e-30
>gb|EOX93311.1| RNA-binding family protein isoform 1 [Theobroma cacao]
Length = 137
Score = 152 bits (383), Expect = 6e-35
Identities = 72/93 (77%), Positives = 83/93 (89%)
Frame = +3
Query: 24 NPKLFVGGLSWSVDEKSLRDAFSSFGEVTEVRIMYDKSTGRSRGFGFVRFATDDAAKYAR 203
N KLFV GLSWSVDEKSL+DAFSSFG V+EVRIMYDK TGRSRGFGFV F+ +D A+ A+
Sbjct: 41 NGKLFVAGLSWSVDEKSLKDAFSSFGHVSEVRIMYDKDTGRSRGFGFVHFSKEDEARCAK 100
Query: 204 NAMDGKAFLGRPLRISFAVDKVRGVPIVVPRLP 302
+AMDGKA LGRPLRISFA++K+RG P+VVPRLP
Sbjct: 101 DAMDGKALLGRPLRISFALEKIRGAPVVVPRLP 133
>ref|XP_006357956.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
[Solanum tuberosum]
Length = 151
Score = 150 bits (378), Expect = 2e-34
Identities = 72/92 (78%), Positives = 82/92 (89%)
Frame = +3
Query: 24 NPKLFVGGLSWSVDEKSLRDAFSSFGEVTEVRIMYDKSTGRSRGFGFVRFATDDAAKYAR 203
N KLFV GLSWSVDEKSL DAFSSFG+VTEVRIMYDK TGRSRGFGFV F+ D+ A A+
Sbjct: 49 NNKLFVAGLSWSVDEKSLSDAFSSFGQVTEVRIMYDKETGRSRGFGFVYFSKDEEASSAK 108
Query: 204 NAMDGKAFLGRPLRISFAVDKVRGVPIVVPRL 299
++MDGKAFLGRPLR+SFA++KVRG P+VVPRL
Sbjct: 109 DSMDGKAFLGRPLRVSFALEKVRGAPVVVPRL 140
>gb|EXB37811.1| Glycine-rich RNA-binding protein 2 [Morus notabilis]
Length = 153
Score = 149 bits (377), Expect = 3e-34
Identities = 74/101 (73%), Positives = 87/101 (86%)
Frame = +3
Query: 21 SNPKLFVGGLSWSVDEKSLRDAFSSFGEVTEVRIMYDKSTGRSRGFGFVRFATDDAAKYA 200
SN KLFVGGLSWSVDEKSL+DAFSSFGEV+EVRI+YDK +GRSRGFGFV F ++ A A
Sbjct: 50 SNNKLFVGGLSWSVDEKSLKDAFSSFGEVSEVRILYDKDSGRSRGFGFVHFLKEEDAVSA 109
Query: 201 RNAMDGKAFLGRPLRISFAVDKVRGVPIVVPRLPADEESTN 323
+++MDGKA LGRPLRISFA++KVRGVP+VVPRL +S N
Sbjct: 110 KDSMDGKALLGRPLRISFALEKVRGVPVVVPRLSNVGDSFN 150
>ref|XP_004243523.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Solanum lycopersicum]
Length = 141
Score = 149 bits (376), Expect = 4e-34
Identities = 72/92 (78%), Positives = 81/92 (88%)
Frame = +3
Query: 24 NPKLFVGGLSWSVDEKSLRDAFSSFGEVTEVRIMYDKSTGRSRGFGFVRFATDDAAKYAR 203
N KLFV GLSWSVDEKSL DAFSSFG+VTEVRIMYDK TGRSRGFGFV F D+ A A+
Sbjct: 39 NNKLFVAGLSWSVDEKSLSDAFSSFGQVTEVRIMYDKETGRSRGFGFVYFLKDEEASSAK 98
Query: 204 NAMDGKAFLGRPLRISFAVDKVRGVPIVVPRL 299
++MDGKAFLGRPLR+SFA++KVRG P+VVPRL
Sbjct: 99 DSMDGKAFLGRPLRVSFALEKVRGAPVVVPRL 130
>ref|XP_002525321.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
gi|223535380|gb|EEF37054.1| glycine-rich RNA-binding
protein, putative [Ricinus communis]
Length = 126
Score = 148 bits (374), Expect = 6e-34
Identities = 73/100 (73%), Positives = 87/100 (87%)
Frame = +3
Query: 24 NPKLFVGGLSWSVDEKSLRDAFSSFGEVTEVRIMYDKSTGRSRGFGFVRFATDDAAKYAR 203
N KLFV GLSWSVDEKSL+DAFSSFGEV+EVRIMYDK +GRSRGFGFV F+ ++ A A+
Sbjct: 24 NSKLFVAGLSWSVDEKSLKDAFSSFGEVSEVRIMYDKDSGRSRGFGFVNFSKENEAVCAK 83
Query: 204 NAMDGKAFLGRPLRISFAVDKVRGVPIVVPRLPADEESTN 323
+AMDGKA LGRPLRISFA++KVRG PIVVPRL + +++N
Sbjct: 84 DAMDGKALLGRPLRISFALEKVRGGPIVVPRLSSAGDNSN 123
>ref|XP_003601384.1| Glycine-rich RNA-binding protein [Medicago truncatula]
gi|355490432|gb|AES71635.1| Glycine-rich RNA-binding
protein [Medicago truncatula]
Length = 135
Score = 148 bits (373), Expect = 8e-34
Identities = 70/92 (76%), Positives = 85/92 (92%)
Frame = +3
Query: 21 SNPKLFVGGLSWSVDEKSLRDAFSSFGEVTEVRIMYDKSTGRSRGFGFVRFATDDAAKYA 200
S+ KLFVGGLSWSVDEKSL+DAFSSFG+VTEVRI+YDK +GR+RGFGFV F+ +DAAK A
Sbjct: 34 SSNKLFVGGLSWSVDEKSLKDAFSSFGDVTEVRIVYDKDSGRARGFGFVIFSNEDAAKSA 93
Query: 201 RNAMDGKAFLGRPLRISFAVDKVRGVPIVVPR 296
++AMDGKA LGRPLRI+FA++K RG+P+VVPR
Sbjct: 94 KDAMDGKALLGRPLRINFALEKPRGIPVVVPR 125
>ref|XP_004502036.1| PREDICTED: RNA-binding protein Musashi homolog 2-like [Cicer
arietinum]
Length = 180
Score = 147 bits (371), Expect = 1e-33
Identities = 71/92 (77%), Positives = 84/92 (91%)
Frame = +3
Query: 21 SNPKLFVGGLSWSVDEKSLRDAFSSFGEVTEVRIMYDKSTGRSRGFGFVRFATDDAAKYA 200
S+ KLFVGGLSWSVDEKSL+DAFSSFG+VTEVRI+YDK TGRSRGFGFV F+ ++ AK A
Sbjct: 77 SSNKLFVGGLSWSVDEKSLKDAFSSFGDVTEVRIVYDKDTGRSRGFGFVIFSNEEHAKSA 136
Query: 201 RNAMDGKAFLGRPLRISFAVDKVRGVPIVVPR 296
+++MDGKA LGRPLRI+FA+DKVRG P+VVPR
Sbjct: 137 KDSMDGKALLGRPLRINFALDKVRGGPVVVPR 168
>ref|XP_002273998.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial [Vitis
vinifera] gi|297739201|emb|CBI28852.3| unnamed protein
product [Vitis vinifera]
Length = 140
Score = 146 bits (368), Expect = 3e-33
Identities = 71/92 (77%), Positives = 83/92 (90%)
Frame = +3
Query: 21 SNPKLFVGGLSWSVDEKSLRDAFSSFGEVTEVRIMYDKSTGRSRGFGFVRFATDDAAKYA 200
SN KLFV GLSWSVDEKSL+DAFSSFG+VTEVRIMYDK +GRSRGFGFV F+ + A+ A
Sbjct: 36 SNTKLFVAGLSWSVDEKSLKDAFSSFGDVTEVRIMYDKDSGRSRGFGFVYFSKEVDARSA 95
Query: 201 RNAMDGKAFLGRPLRISFAVDKVRGVPIVVPR 296
++AMDGKAFLGRPLR+S+A++KVRG PIVVPR
Sbjct: 96 KDAMDGKAFLGRPLRVSYALEKVRGGPIVVPR 127
>ref|XP_006846342.1| hypothetical protein AMTR_s00012p00258090 [Amborella trichopoda]
gi|548849112|gb|ERN08017.1| hypothetical protein
AMTR_s00012p00258090 [Amborella trichopoda]
Length = 132
Score = 145 bits (367), Expect = 4e-33
Identities = 68/93 (73%), Positives = 84/93 (90%)
Frame = +3
Query: 21 SNPKLFVGGLSWSVDEKSLRDAFSSFGEVTEVRIMYDKSTGRSRGFGFVRFATDDAAKYA 200
S+ +LFVGGLSW VDEKSL+D+FSSFG+VTEVRI+YD+ +GRSRGFGF+ F+ +D AK A
Sbjct: 32 SSSRLFVGGLSWGVDEKSLKDSFSSFGDVTEVRIIYDRDSGRSRGFGFIYFSNEDEAKCA 91
Query: 201 RNAMDGKAFLGRPLRISFAVDKVRGVPIVVPRL 299
++AMDGKA LGRPLRISFA++KVRG P+VVPRL
Sbjct: 92 KDAMDGKALLGRPLRISFAIEKVRGGPLVVPRL 124
>ref|XP_004151901.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus] gi|449522522|ref|XP_004168275.1|
PREDICTED: glycine-rich RNA-binding protein 2,
mitochondrial-like [Cucumis sativus]
Length = 145
Score = 145 bits (367), Expect = 4e-33
Identities = 71/92 (77%), Positives = 82/92 (89%)
Frame = +3
Query: 24 NPKLFVGGLSWSVDEKSLRDAFSSFGEVTEVRIMYDKSTGRSRGFGFVRFATDDAAKYAR 203
N KLFV GLSWS+DE+SL+DAFSSFGEVTEVRI+YDK +GRSRGFGFV FA + A+ A+
Sbjct: 43 NNKLFVAGLSWSMDERSLKDAFSSFGEVTEVRIVYDKDSGRSRGFGFVNFANGNDAQCAK 102
Query: 204 NAMDGKAFLGRPLRISFAVDKVRGVPIVVPRL 299
+AMDGKA LGRPLRISFA+DKVRG P+VVPRL
Sbjct: 103 DAMDGKAVLGRPLRISFALDKVRGEPVVVPRL 134
>ref|XP_003528518.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
[Glycine max]
Length = 137
Score = 144 bits (362), Expect = 2e-32
Identities = 69/93 (74%), Positives = 83/93 (89%)
Frame = +3
Query: 21 SNPKLFVGGLSWSVDEKSLRDAFSSFGEVTEVRIMYDKSTGRSRGFGFVRFATDDAAKYA 200
S+ KLFVGGLSWSVD KSL++AFSSFG+VTEV I+YDK +GRSRGFGFV F+ +D AK A
Sbjct: 36 SSNKLFVGGLSWSVDHKSLKEAFSSFGDVTEVTIVYDKDSGRSRGFGFVIFSNEDDAKCA 95
Query: 201 RNAMDGKAFLGRPLRISFAVDKVRGVPIVVPRL 299
++AMDGKA LGRPLRI+FA++K RGVP+VVPRL
Sbjct: 96 KDAMDGKALLGRPLRINFALEKARGVPVVVPRL 128
>ref|XP_002321147.1| predicted protein [Populus trichocarpa]
Length = 120
Score = 144 bits (362), Expect = 2e-32
Identities = 68/94 (72%), Positives = 83/94 (88%)
Frame = +3
Query: 21 SNPKLFVGGLSWSVDEKSLRDAFSSFGEVTEVRIMYDKSTGRSRGFGFVRFATDDAAKYA 200
+N KLFV GLSWSVDEKSL+DAFSSFG+VTEV I+YD+++GRSRGFGFV F +D A A
Sbjct: 16 TNNKLFVAGLSWSVDEKSLKDAFSSFGDVTEVNILYDRNSGRSRGFGFVSFCKEDEAVSA 75
Query: 201 RNAMDGKAFLGRPLRISFAVDKVRGVPIVVPRLP 302
++AMDGKA LGRPLRIS+A+++VRG P+VVPRLP
Sbjct: 76 KDAMDGKALLGRPLRISYALERVRGGPVVVPRLP 109
>ref|XP_004305987.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Fragaria vesca subsp. vesca]
Length = 139
Score = 143 bits (361), Expect = 2e-32
Identities = 69/100 (69%), Positives = 85/100 (85%)
Frame = +3
Query: 24 NPKLFVGGLSWSVDEKSLRDAFSSFGEVTEVRIMYDKSTGRSRGFGFVRFATDDAAKYAR 203
N KLFVGGLSWS+DEKSL++AFSS+GEVTEV I+YDK +GRSRGFGFV F+ +D AK A+
Sbjct: 38 NNKLFVGGLSWSLDEKSLKEAFSSYGEVTEVTIVYDKDSGRSRGFGFVNFSREDDAKSAK 97
Query: 204 NAMDGKAFLGRPLRISFAVDKVRGVPIVVPRLPADEESTN 323
+AMDGKA +GRPLRISFA+++VRG +VVPRLP + N
Sbjct: 98 DAMDGKALMGRPLRISFALERVRGGHVVVPRLPGIGDGGN 137
>ref|XP_006447631.1| hypothetical protein CICLE_v10017091mg [Citrus clementina]
gi|568830698|ref|XP_006469627.1| PREDICTED: glycine-rich
RNA-binding protein 4, mitochondrial-like [Citrus
sinensis] gi|557550242|gb|ESR60871.1| hypothetical
protein CICLE_v10017091mg [Citrus clementina]
Length = 145
Score = 143 bits (360), Expect = 3e-32
Identities = 67/92 (72%), Positives = 82/92 (89%)
Frame = +3
Query: 24 NPKLFVGGLSWSVDEKSLRDAFSSFGEVTEVRIMYDKSTGRSRGFGFVRFATDDAAKYAR 203
N KLFV GLSW+VDEKSL+DAFSSFGEVTEV+I+YDK +GRSRGFGFV F+ +D A+ A+
Sbjct: 43 NSKLFVAGLSWTVDEKSLKDAFSSFGEVTEVKIIYDKDSGRSRGFGFVHFSKEDDAESAK 102
Query: 204 NAMDGKAFLGRPLRISFAVDKVRGVPIVVPRL 299
+AMDGK LGRPLRISFA+++VRG P+VVPR+
Sbjct: 103 HAMDGKGLLGRPLRISFALERVRGEPVVVPRI 134
>ref|XP_004971023.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
isoform X2 [Setaria italica]
Length = 143
Score = 142 bits (357), Expect = 6e-32
Identities = 67/93 (72%), Positives = 80/93 (86%)
Frame = +3
Query: 21 SNPKLFVGGLSWSVDEKSLRDAFSSFGEVTEVRIMYDKSTGRSRGFGFVRFATDDAAKYA 200
SN +LFV GLSWSVDE+SL DAFS+FG VTEVRI+YDK++GR RGFGFV F+ D AK A
Sbjct: 47 SNSRLFVAGLSWSVDERSLTDAFSTFGTVTEVRIIYDKNSGRPRGFGFVHFSNDHEAKCA 106
Query: 201 RNAMDGKAFLGRPLRISFAVDKVRGVPIVVPRL 299
++AMDGK LGRPLRISFA++KVRG P++VPRL
Sbjct: 107 KDAMDGKVMLGRPLRISFALEKVRGAPVIVPRL 139
>ref|XP_004971022.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
isoform X1 [Setaria italica]
Length = 145
Score = 142 bits (357), Expect = 6e-32
Identities = 67/93 (72%), Positives = 80/93 (86%)
Frame = +3
Query: 21 SNPKLFVGGLSWSVDEKSLRDAFSSFGEVTEVRIMYDKSTGRSRGFGFVRFATDDAAKYA 200
SN +LFV GLSWSVDE+SL DAFS+FG VTEVRI+YDK++GR RGFGFV F+ D AK A
Sbjct: 47 SNSRLFVAGLSWSVDERSLTDAFSTFGTVTEVRIIYDKNSGRPRGFGFVHFSNDHEAKCA 106
Query: 201 RNAMDGKAFLGRPLRISFAVDKVRGVPIVVPRL 299
++AMDGK LGRPLRISFA++KVRG P++VPRL
Sbjct: 107 KDAMDGKVMLGRPLRISFALEKVRGAPVIVPRL 139
>ref|XP_003567391.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Brachypodium distachyon]
Length = 141
Score = 141 bits (355), Expect = 1e-31
Identities = 68/93 (73%), Positives = 80/93 (86%)
Frame = +3
Query: 21 SNPKLFVGGLSWSVDEKSLRDAFSSFGEVTEVRIMYDKSTGRSRGFGFVRFATDDAAKYA 200
SNPKLFV GLSWS DE+SL DAFSSFG VTEVRIMYDK++GRSRGFGFV+F+ D AK A
Sbjct: 45 SNPKLFVAGLSWSADERSLMDAFSSFGTVTEVRIMYDKNSGRSRGFGFVQFSNDYEAKCA 104
Query: 201 RNAMDGKAFLGRPLRISFAVDKVRGVPIVVPRL 299
++AMDGK LGR L+IS+A+ KVRG P++VPRL
Sbjct: 105 KDAMDGKVMLGRSLKISYALGKVRGGPVIVPRL 137
>ref|NP_001130982.1| hypothetical protein [Zea mays] gi|194690622|gb|ACF79395.1| unknown
[Zea mays] gi|413951564|gb|AFW84213.1| hypothetical
protein ZEAMMB73_909652 [Zea mays]
Length = 142
Score = 140 bits (352), Expect = 2e-31
Identities = 67/93 (72%), Positives = 80/93 (86%)
Frame = +3
Query: 21 SNPKLFVGGLSWSVDEKSLRDAFSSFGEVTEVRIMYDKSTGRSRGFGFVRFATDDAAKYA 200
S+ +LFV GLSWSVDE+SL DAFSSFG VTEVRIMYDK++GRSRGFGFV F+ D+ AK A
Sbjct: 46 SDSRLFVAGLSWSVDERSLTDAFSSFGTVTEVRIMYDKNSGRSRGFGFVHFSNDNEAKCA 105
Query: 201 RNAMDGKAFLGRPLRISFAVDKVRGVPIVVPRL 299
++AMDGK LGRPLRISFA+ +VRG ++VPRL
Sbjct: 106 KDAMDGKVMLGRPLRISFALGRVRGASVIVPRL 138
>ref|NP_187457.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|6648212|gb|AAF21210.1|AC013483_34 putative
RNA-binding protein [Arabidopsis thaliana]
gi|45752630|gb|AAS76213.1| At3g08000 [Arabidopsis
thaliana] gi|46359799|gb|AAS88763.1| At3g08000
[Arabidopsis thaliana] gi|332641108|gb|AEE74629.1| RNA
recognition motif-containing protein [Arabidopsis
thaliana]
Length = 143
Score = 138 bits (347), Expect = 9e-31
Identities = 67/90 (74%), Positives = 78/90 (86%)
Frame = +3
Query: 30 KLFVGGLSWSVDEKSLRDAFSSFGEVTEVRIMYDKSTGRSRGFGFVRFATDDAAKYARNA 209
KLF+GGLSWSVDE+SL+DAFSSFGEV EVRI YDK +GRSRGFGFV FA + A A++A
Sbjct: 42 KLFIGGLSWSVDEQSLKDAFSSFGEVAEVRIAYDKGSGRSRGFGFVDFAEEGDALSAKDA 101
Query: 210 MDGKAFLGRPLRISFAVDKVRGVPIVVPRL 299
MDGK LGRPLRISFA+++VRG P+VVPRL
Sbjct: 102 MDGKGLLGRPLRISFALERVRGGPVVVPRL 131
>ref|XP_006298743.1| hypothetical protein CARUB_v10014853mg [Capsella rubella]
gi|482567452|gb|EOA31641.1| hypothetical protein
CARUB_v10014853mg [Capsella rubella]
Length = 146
Score = 137 bits (344), Expect = 2e-30
Identities = 66/90 (73%), Positives = 78/90 (86%)
Frame = +3
Query: 30 KLFVGGLSWSVDEKSLRDAFSSFGEVTEVRIMYDKSTGRSRGFGFVRFATDDAAKYARNA 209
KLF+GGLSWSVDE+SL+DAFSSFGEV EVRI YDK +GRSRGFGFV FA +D A A++A
Sbjct: 45 KLFIGGLSWSVDEQSLKDAFSSFGEVAEVRIAYDKGSGRSRGFGFVDFAEEDDALSAKDA 104
Query: 210 MDGKAFLGRPLRISFAVDKVRGVPIVVPRL 299
MDGK LGRPLRISFA+++VRG P+VV R+
Sbjct: 105 MDGKGLLGRPLRISFALERVRGGPVVVSRI 134