BLASTX nr result
ID: Zingiber25_contig00029680
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00029680
(325 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABA93957.1| NLI interacting factor-like phosphatase family pr... 72 6e-11
gb|EEE52187.1| hypothetical protein OsJ_34058 [Oryza sativa Japo... 72 6e-11
ref|NP_001067984.1| Os11g0521900 [Oryza sativa Japonica Group] g... 72 6e-11
gb|EXB81217.1| RNA polymerase II C-terminal domain phosphatase-l... 70 3e-10
gb|EEC68257.1| hypothetical protein OsI_36281 [Oryza sativa Indi... 68 1e-09
ref|XP_006662962.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymera... 68 1e-09
ref|XP_003577532.1| PREDICTED: RNA polymerase II C-terminal doma... 67 2e-09
ref|XP_004492029.1| PREDICTED: RNA polymerase II C-terminal doma... 66 6e-09
ref|XP_004492028.1| PREDICTED: RNA polymerase II C-terminal doma... 66 6e-09
ref|XP_002449554.1| hypothetical protein SORBIDRAFT_05g019010 [S... 65 9e-09
ref|XP_002297869.2| CTD phosphatase-like protein 3 [Populus tric... 64 3e-08
gb|EOX99661.1| RNA polymerase II C-terminal domain phosphatase-l... 62 8e-08
dbj|BAK05207.1| predicted protein [Hordeum vulgare subsp. vulgare] 62 1e-07
emb|CBI35661.3| unnamed protein product [Vitis vinifera] 61 1e-07
ref|XP_004980548.1| PREDICTED: RNA polymerase II C-terminal doma... 60 2e-07
gb|EMS65645.1| RNA polymerase II C-terminal domain phosphatase-l... 60 2e-07
ref|XP_002512650.1| RNA polymerase II ctd phosphatase, putative ... 60 2e-07
ref|XP_002266931.2| PREDICTED: RNA polymerase II C-terminal doma... 60 4e-07
gb|AFW60862.1| hypothetical protein ZEAMMB73_799152, partial [Ze... 59 7e-07
ref|XP_002304648.2| hypothetical protein POPTR_0003s16280g [Popu... 59 9e-07
>gb|ABA93957.1| NLI interacting factor-like phosphatase family protein, expressed
[Oryza sativa Japonica Group]
Length = 1272
Score = 72.4 bits (176), Expect = 6e-11
Identities = 47/111 (42%), Positives = 66/111 (59%), Gaps = 4/111 (3%)
Frame = +3
Query: 3 PTISLPSLLK--AVNPTILMHLHPLEQQRL-AGENQKKNTVSTSESANVLSDSGLPGTVA 173
P +SLP++LK AVNPT+LM +EQQ++ A E Q+K T S ++NV PG V
Sbjct: 689 PAVSLPAMLKDIAVNPTMLMQWIQMEQQKMSASEPQQKVTASVGMTSNVT-----PGMVL 743
Query: 174 SVNYAPLKSKESGLKHPGISP-IASQIASLSTQTDAARIHMKPRDPRRILH 323
+ AP ++ + + P + P + Q A + +Q D I MKPRDPRRILH
Sbjct: 744 PLGNAPKTTEVAAV--PSVRPQVPMQSAPMHSQNDTGVIRMKPRDPRRILH 792
>gb|EEE52187.1| hypothetical protein OsJ_34058 [Oryza sativa Japonica Group]
Length = 1267
Score = 72.4 bits (176), Expect = 6e-11
Identities = 47/111 (42%), Positives = 66/111 (59%), Gaps = 4/111 (3%)
Frame = +3
Query: 3 PTISLPSLLK--AVNPTILMHLHPLEQQRL-AGENQKKNTVSTSESANVLSDSGLPGTVA 173
P +SLP++LK AVNPT+LM +EQQ++ A E Q+K T S ++NV PG V
Sbjct: 684 PAVSLPAMLKDIAVNPTMLMQWIQMEQQKMSASEPQQKVTASVGMTSNVT-----PGMVL 738
Query: 174 SVNYAPLKSKESGLKHPGISP-IASQIASLSTQTDAARIHMKPRDPRRILH 323
+ AP ++ + + P + P + Q A + +Q D I MKPRDPRRILH
Sbjct: 739 PLGNAPKTTEVAAV--PSVRPQVPMQSAPMHSQNDTGVIRMKPRDPRRILH 787
>ref|NP_001067984.1| Os11g0521900 [Oryza sativa Japonica Group]
gi|113645206|dbj|BAF28347.1| Os11g0521900 [Oryza sativa
Japonica Group]
Length = 664
Score = 72.4 bits (176), Expect = 6e-11
Identities = 47/111 (42%), Positives = 66/111 (59%), Gaps = 4/111 (3%)
Frame = +3
Query: 3 PTISLPSLLK--AVNPTILMHLHPLEQQRL-AGENQKKNTVSTSESANVLSDSGLPGTVA 173
P +SLP++LK AVNPT+LM +EQQ++ A E Q+K T S ++NV PG V
Sbjct: 81 PAVSLPAMLKDIAVNPTMLMQWIQMEQQKMSASEPQQKVTASVGMTSNVT-----PGMVL 135
Query: 174 SVNYAPLKSKESGLKHPGISP-IASQIASLSTQTDAARIHMKPRDPRRILH 323
+ AP ++ + + P + P + Q A + +Q D I MKPRDPRRILH
Sbjct: 136 PLGNAPKTTEVAAV--PSVRPQVPMQSAPMHSQNDTGVIRMKPRDPRRILH 184
>gb|EXB81217.1| RNA polymerase II C-terminal domain phosphatase-like 3 [Morus
notabilis]
Length = 1301
Score = 70.1 bits (170), Expect = 3e-10
Identities = 46/109 (42%), Positives = 67/109 (61%), Gaps = 5/109 (4%)
Frame = +3
Query: 12 SLPSLLK--AVNPTILMH-LHPLEQQRLAGENQKKNTVSTSESANVLSDSGLPGTVASVN 182
+LP++LK AVNPTI M L+ L QQ+L + ++ + S+ + + + + G VN
Sbjct: 695 ALPAILKDIAVNPTIFMDILNKLGQQQLLAADAQQKSDSSKNTTHPPGTNSILGAAPLVN 754
Query: 183 YAPLKSKESG-LKHPGIS-PIASQIASLSTQTDAARIHMKPRDPRRILH 323
AP SK SG L+ P +S P SQ+A+ S Q + +I MKPRDPRR+LH
Sbjct: 755 VAP--SKASGILQTPAVSLPTTSQVATASMQDELGKIRMKPRDPRRVLH 801
>gb|EEC68257.1| hypothetical protein OsI_36281 [Oryza sativa Indica Group]
Length = 1255
Score = 68.2 bits (165), Expect = 1e-09
Identities = 45/111 (40%), Positives = 64/111 (57%), Gaps = 4/111 (3%)
Frame = +3
Query: 3 PTISLPSLLK--AVNPTILMHLHPLEQQRL-AGENQKKNTVSTSESANVLSDSGLPGTVA 173
P +SLP++LK AVNPT+LM +E ++ A E Q+K T S ++NV PG V
Sbjct: 672 PAVSLPAMLKDIAVNPTMLMQWIRMEHHKMSASEPQQKVTASVGMTSNVT-----PGMVL 726
Query: 174 SVNYAPLKSKESGLKHPGISP-IASQIASLSTQTDAARIHMKPRDPRRILH 323
+ AP ++ + + P + P + Q A + +Q D I MKPRDPRRILH
Sbjct: 727 PLGNAPKTTEVAAV--PSVRPQVPMQSAPMHSQNDTGVIRMKPRDPRRILH 775
>ref|XP_006662962.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase II C-terminal domain
phosphatase-like 3-like [Oryza brachyantha]
Length = 1267
Score = 67.8 bits (164), Expect = 1e-09
Identities = 46/110 (41%), Positives = 65/110 (59%), Gaps = 3/110 (2%)
Frame = +3
Query: 3 PTISLPSLLK--AVNPTILMHLHPLEQQRL-AGENQKKNTVSTSESANVLSDSGLPGTVA 173
P++SLP++LK AVNPT+LM +EQQ++ A E +K T S ++N + LP + A
Sbjct: 685 PSVSLPAMLKDIAVNPTMLMQWIQMEQQKMSATEPLQKVTASVGMTSNETAGMVLPLSCA 744
Query: 174 SVNYAPLKSKESGLKHPGISPIASQIASLSTQTDAARIHMKPRDPRRILH 323
S K+ E+ S + Q A++ +Q DA I MKPRDPRRILH
Sbjct: 745 S------KTTEAAPVPSVRSQVPMQTAAVHSQNDAGVIRMKPRDPRRILH 788
>ref|XP_003577532.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
3-like [Brachypodium distachyon]
Length = 1259
Score = 67.4 bits (163), Expect = 2e-09
Identities = 51/112 (45%), Positives = 69/112 (61%), Gaps = 5/112 (4%)
Frame = +3
Query: 3 PTISLPSLLK--AVNPTILMHLHPLEQQ-RLAGENQKK-NTVSTSESANVLSDSGLPGTV 170
P++SLP++LK AVNPT+LMH +EQQ R A E Q+ NT+ S + +D+ G V
Sbjct: 667 PSVSLPAVLKDIAVNPTVLMHWIQMEQQKRSASEPQQTVNTLGGISSGMINNDTA--GMV 724
Query: 171 ASVNYAPLKSKESGLKHPGISP-IASQIASLSTQTDAARIHMKPRDPRRILH 323
A LK+ ++ + P I P +Q A + +QTDA I MKPRDPRRILH
Sbjct: 725 IPPGSA-LKTADAA-QIPSIRPQCPTQTAPVISQTDAGVIRMKPRDPRRILH 774
>ref|XP_004492029.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
3-like isoform X2 [Cicer arietinum]
Length = 1227
Score = 65.9 bits (159), Expect = 6e-09
Identities = 43/108 (39%), Positives = 64/108 (59%), Gaps = 4/108 (3%)
Frame = +3
Query: 12 SLPSLLK--AVNPTILMHLHPLEQQRLAGENQKKNTVSTSESANVLSDSGLPGTVASVNY 185
+LP LLK AVNPT+L+++ +QQRLA E KK S + + ++ + + P A+VN
Sbjct: 634 ALPGLLKNIAVNPTMLLNILLEQQQRLAAEANKKPVDSATSTMHLTNSARGPD--ATVNT 691
Query: 186 APLKSKESGLKHPGISPIASQIASLSTQT--DAARIHMKPRDPRRILH 323
P + G+ P ++Q AS++ D+ +I MKPRDPRRILH
Sbjct: 692 GPAMTAGLPQSSVGMLPASTQAASMAHTLLEDSGKIRMKPRDPRRILH 739
>ref|XP_004492028.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
3-like isoform X1 [Cicer arietinum]
Length = 1247
Score = 65.9 bits (159), Expect = 6e-09
Identities = 43/108 (39%), Positives = 64/108 (59%), Gaps = 4/108 (3%)
Frame = +3
Query: 12 SLPSLLK--AVNPTILMHLHPLEQQRLAGENQKKNTVSTSESANVLSDSGLPGTVASVNY 185
+LP LLK AVNPT+L+++ +QQRLA E KK S + + ++ + + P A+VN
Sbjct: 654 ALPGLLKNIAVNPTMLLNILLEQQQRLAAEANKKPVDSATSTMHLTNSARGPD--ATVNT 711
Query: 186 APLKSKESGLKHPGISPIASQIASLSTQT--DAARIHMKPRDPRRILH 323
P + G+ P ++Q AS++ D+ +I MKPRDPRRILH
Sbjct: 712 GPAMTAGLPQSSVGMLPASTQAASMAHTLLEDSGKIRMKPRDPRRILH 759
>ref|XP_002449554.1| hypothetical protein SORBIDRAFT_05g019010 [Sorghum bicolor]
gi|241935397|gb|EES08542.1| hypothetical protein
SORBIDRAFT_05g019010 [Sorghum bicolor]
Length = 1197
Score = 65.1 bits (157), Expect = 9e-09
Identities = 40/111 (36%), Positives = 65/111 (58%), Gaps = 4/111 (3%)
Frame = +3
Query: 3 PTISLPSLLK---AVNPTILMHLHPLEQQRLAGENQKKNTVSTSESANVLSDSGLPGTVA 173
P + +PS+L AVNPT+LMHL +E Q+ K + + ++ +S++G+ G V
Sbjct: 629 PAVPVPSMLLKDIAVNPTLLMHLIQMEHQK------KSASETQGGMSSGMSNNGIAGMVF 682
Query: 174 SVNYAPLKSKESGLKHPGISP-IASQIASLSTQTDAARIHMKPRDPRRILH 323
+ AP ++ + + P + P + +Q SL++Q D + MKPRDPRRILH
Sbjct: 683 TPGNAPKTTEAAQV--PSVRPQVPAQTPSLNSQNDGGILRMKPRDPRRILH 731
>ref|XP_002297869.2| CTD phosphatase-like protein 3 [Populus trichocarpa]
gi|550347145|gb|EEE82674.2| CTD phosphatase-like protein
3 [Populus trichocarpa]
Length = 1190
Score = 63.5 bits (153), Expect = 3e-08
Identities = 44/110 (40%), Positives = 67/110 (60%), Gaps = 4/110 (3%)
Frame = +3
Query: 6 TISLPSLLK--AVNPTILMHLHPL-EQQRLAGENQKKNTVSTSESANVLSDSGLPGTVAS 176
T SLP LLK AVNPT+L+++ + +QQRLA + Q+ + +++ + + G + +
Sbjct: 610 TTSLPDLLKDIAVNPTMLINILKMGQQQRLALDGQQTLSDPAKSTSHPPISNTVLGAIPT 669
Query: 177 VNYAPLKSKESGL-KHPGISPIASQIASLSTQTDAARIHMKPRDPRRILH 323
VN A S+ SG+ P +P+ SQIA T ++ +I MKPRDPRR LH
Sbjct: 670 VNVA--SSQPSGIFPRPAGTPVPSQIA---TSDESGKIRMKPRDPRRFLH 714
>gb|EOX99661.1| RNA polymerase II C-terminal domain phosphatase-like 3, putative
[Theobroma cacao]
Length = 1290
Score = 62.0 bits (149), Expect = 8e-08
Identities = 42/110 (38%), Positives = 63/110 (57%), Gaps = 4/110 (3%)
Frame = +3
Query: 6 TISLPSLLK--AVNPTILMHLHPL-EQQRLAGENQKKNTVSTSESANVLSDSGLPGTVAS 176
T SLP+LLK AVNPT+L+++ + +QQRL E Q+K+ + + S + L G V+S
Sbjct: 698 TPSLPALLKDIAVNPTMLINILKMGQQQRLGAEAQQKSPDPVKSTFHQPSSNSLLGVVSS 757
Query: 177 VNYAPLKSKESGLK-HPGISPIASQIASLSTQTDAARIHMKPRDPRRILH 323
N P S + GIS + + + ++ +I MKPRDPRR+LH
Sbjct: 758 TNVIPSPSVNNVPSISSGISSKPAGNLQVPSPDESGKIRMKPRDPRRVLH 807
>dbj|BAK05207.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 891
Score = 61.6 bits (148), Expect = 1e-07
Identities = 39/111 (35%), Positives = 62/111 (55%), Gaps = 4/111 (3%)
Frame = +3
Query: 3 PTISLPSLLK--AVNPTILMHLHPLEQQRLAGENQKKNTVSTSESANVLSDSGLPGTVAS 176
P +SLP++LK AVNPT+LMH +E +QK++ ++ ++S + A
Sbjct: 308 PIVSLPAVLKDIAVNPTVLMHWIQME-------HQKRSPSEPQPASGIISSGMINNVTAG 360
Query: 177 VNYAPLKS-KESGLKH-PGISPIASQIASLSTQTDAARIHMKPRDPRRILH 323
+ +P + K + + H P P A+ AS+++Q D I MK RDPRR+LH
Sbjct: 361 MVISPGNALKTAEVAHIPSYRPQATSTASVNSQNDPGVIRMKSRDPRRVLH 411
>emb|CBI35661.3| unnamed protein product [Vitis vinifera]
Length = 1184
Score = 61.2 bits (147), Expect = 1e-07
Identities = 42/108 (38%), Positives = 59/108 (54%), Gaps = 2/108 (1%)
Frame = +3
Query: 6 TISLPSLLK--AVNPTILMHLHPLEQQRLAGENQKKNTVSTSESANVLSDSGLPGTVASV 179
T SL SLLK AVNP + M++ +Q+ +G+ KNTV S ++L G V
Sbjct: 617 TASLQSLLKDIAVNPAVWMNIFNKVEQQKSGD-PAKNTVLPPTSNSIL------GVVPPA 669
Query: 180 NYAPLKSKESGLKHPGISPIASQIASLSTQTDAARIHMKPRDPRRILH 323
+ APLK G K G + Q ++ Q ++ ++ MKPRDPRRILH
Sbjct: 670 SVAPLKPSALGQKPAGALQVP-QTGPMNPQDESGKVRMKPRDPRRILH 716
>ref|XP_004980548.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
3-like [Setaria italica]
Length = 1074
Score = 60.5 bits (145), Expect = 2e-07
Identities = 40/111 (36%), Positives = 63/111 (56%), Gaps = 4/111 (3%)
Frame = +3
Query: 3 PTISLPS-LLKAV--NPTILMHLHPLEQQRLAGENQKKNTVSTSESANVLSDSGLPGTVA 173
P +SLPS LLK + NPT+LM+ +EQQ+++ ++ +S+ + G+ GTV
Sbjct: 507 PAVSLPSSLLKDIAGNPTVLMNWIKMEQQKMSASEPQQVAMSSGTIS-----IGIAGTVL 561
Query: 174 SVNYAPLKSKESGLKHPGISP-IASQIASLSTQTDAARIHMKPRDPRRILH 323
AP ++ + + P + P + Q L++Q D + MKPRDPRRILH
Sbjct: 562 PPGSAPKTTEAAQV--PSVRPQVLMQTPPLNSQNDTGILRMKPRDPRRILH 610
>gb|EMS65645.1| RNA polymerase II C-terminal domain phosphatase-like 3 [Triticum
urartu]
Length = 1119
Score = 60.5 bits (145), Expect = 2e-07
Identities = 44/113 (38%), Positives = 62/113 (54%), Gaps = 6/113 (5%)
Frame = +3
Query: 3 PTISLPSLLK--AVNPTILMHLHPLEQQRLAGENQKKNTVSTSESANVLSDSGLPGTVAS 176
P +SLP++LK AVNPT+LMH +E Q K + S + A+ + SG+ V +
Sbjct: 585 PIVSLPAVLKDIAVNPTVLMHWIQMEHQ--------KRSASEPQPASGIISSGMINNVTA 636
Query: 177 VNYAPLKS--KESGLKH-PGISPIA-SQIASLSTQTDAARIHMKPRDPRRILH 323
P + K + + H P P A SQ AS+++Q D I MK RDPRR+LH
Sbjct: 637 GMVIPPGNALKTAEVAHIPSYRPQATSQTASVNSQNDPGVIRMKARDPRRVLH 689
>ref|XP_002512650.1| RNA polymerase II ctd phosphatase, putative [Ricinus communis]
gi|223548611|gb|EEF50102.1| RNA polymerase II ctd
phosphatase, putative [Ricinus communis]
Length = 1195
Score = 60.5 bits (145), Expect = 2e-07
Identities = 43/113 (38%), Positives = 60/113 (53%), Gaps = 7/113 (6%)
Frame = +3
Query: 6 TISLPSLLK--AVNPTILMHLHPL-EQQRLAGENQKKNTVSTSESANVLSDSGLPGTVAS 176
T ++P LLK AVNPT+L+++ + +QQRLA E Q+K + L+ + + GTV
Sbjct: 617 TAAIPDLLKNIAVNPTMLINILKMGQQQRLALEAQQKPVDPAKSTTYPLNSNSMLGTVPV 676
Query: 177 VNYAPLKSKESGLKHPGISPIASQIASLSTQT----DAARIHMKPRDPRRILH 323
V G H GI P + +S Q D +I MKPRDPRR+LH
Sbjct: 677 V----------GAAHSGILPRPAGTVQVSPQLGTADDLGKIRMKPRDPRRVLH 719
>ref|XP_002266931.2| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
3-like [Vitis vinifera]
Length = 1238
Score = 59.7 bits (143), Expect = 4e-07
Identities = 42/108 (38%), Positives = 57/108 (52%), Gaps = 2/108 (1%)
Frame = +3
Query: 6 TISLPSLLK--AVNPTILMHLHPLEQQRLAGENQKKNTVSTSESANVLSDSGLPGTVASV 179
T SL SLLK AVNP + M++ +Q+ +G+ KNTV S ++L G V
Sbjct: 674 TASLQSLLKDIAVNPAVWMNIFNKVEQQKSGD-PAKNTVLPPTSNSIL------GVVPPA 726
Query: 180 NYAPLKSKESGLKHPGISPIASQIASLSTQTDAARIHMKPRDPRRILH 323
+ APLK G K G A Q+ ++ ++ MKPRDPRRILH
Sbjct: 727 SVAPLKPSALGQKPAG----ALQVPQTGPMDESGKVRMKPRDPRRILH 770
>gb|AFW60862.1| hypothetical protein ZEAMMB73_799152, partial [Zea mays]
Length = 1234
Score = 58.9 bits (141), Expect = 7e-07
Identities = 38/111 (34%), Positives = 61/111 (54%), Gaps = 4/111 (3%)
Frame = +3
Query: 3 PTISLPSLLK---AVNPTILMHLHPLEQQRLAGENQKKNTVSTSESANVLSDSGLPGTVA 173
P + LP +L AVNP +LMHL +E Q+ K + S ++ ++++G+ G V
Sbjct: 669 PAVPLPPMLLKDIAVNPALLMHLIQMEHQK------KSASESQGGMSSGMTNNGIAGMVF 722
Query: 174 SVNYAPLKSKESGLKHPGISP-IASQIASLSTQTDAARIHMKPRDPRRILH 323
+ AP ++ + + P + P + Q L++Q D + MKPRDPRRILH
Sbjct: 723 TPGNAPKITEAAQV--PSVRPQVPVQTPPLNSQNDGGIVRMKPRDPRRILH 771
>ref|XP_002304648.2| hypothetical protein POPTR_0003s16280g [Populus trichocarpa]
gi|550343308|gb|EEE79627.2| hypothetical protein
POPTR_0003s16280g [Populus trichocarpa]
Length = 1247
Score = 58.5 bits (140), Expect = 9e-07
Identities = 40/109 (36%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Frame = +3
Query: 6 TISLPSLLK--AVNPTILMHLHPL-EQQRLAGENQKKNTVSTSESANVLSDSGLPGTVAS 176
T SLP LLK VNPT+L+++ + +QQRLA + Q+K +++ S + + G +
Sbjct: 666 TASLPDLLKDITVNPTMLINILKMGQQQRLALDGQQKLADPAKSTSHPPSSNTVLGAIPE 725
Query: 177 VNYAPLKSKESGLKHPGISPIASQIASLSTQTDAARIHMKPRDPRRILH 323
VN + S SG+ P + A + ++T ++ +I MKPRDPRR+LH
Sbjct: 726 VN--AVSSLPSGIL-PRSAGKAQGPSQIATTDESGKIRMKPRDPRRVLH 771