BLASTX nr result
ID: Zingiber25_contig00029678
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00029678
(662 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006656638.1| PREDICTED: uncharacterized protein LOC102719... 157 3e-36
ref|XP_002308540.2| hypothetical protein POPTR_0006s24130g [Popu... 155 1e-35
ref|XP_006474441.1| PREDICTED: U1 small nuclear ribonucleoprotei... 153 4e-35
ref|XP_006474439.1| PREDICTED: U1 small nuclear ribonucleoprotei... 153 4e-35
gb|AFK48970.1| unknown [Lotus japonicus] 153 5e-35
ref|XP_002280068.1| PREDICTED: uncharacterized protein LOC100257... 153 5e-35
ref|XP_002516098.1| conserved hypothetical protein [Ricinus comm... 152 7e-35
ref|XP_006453055.1| hypothetical protein CICLE_v10009319mg [Citr... 150 3e-34
gb|EEC80002.1| hypothetical protein OsI_21654 [Oryza sativa Indi... 150 4e-34
ref|XP_004303492.1| PREDICTED: uncharacterized protein LOC101308... 149 6e-34
ref|XP_003557195.1| PREDICTED: uncharacterized protein LOC100823... 148 1e-33
gb|EOY29962.1| RNA-binding family protein isoform 1 [Theobroma c... 145 1e-32
ref|XP_003526036.1| PREDICTED: uncharacterized protein LOC100809... 145 1e-32
ref|XP_003603172.1| RNA-binding protein with multiple splicing [... 144 3e-32
ref|XP_004141330.1| PREDICTED: uncharacterized protein LOC101211... 143 4e-32
gb|ESW08854.1| hypothetical protein PHAVU_009G079800g [Phaseolus... 143 5e-32
ref|XP_004501453.1| PREDICTED: U1 small nuclear ribonucleoprotei... 142 7e-32
ref|XP_004964565.1| PREDICTED: U1 small nuclear ribonucleoprotei... 141 2e-31
ref|XP_004964564.1| PREDICTED: U1 small nuclear ribonucleoprotei... 141 2e-31
ref|NP_001242381.1| uncharacterized protein LOC100816255 [Glycin... 139 6e-31
>ref|XP_006656638.1| PREDICTED: uncharacterized protein LOC102719305 [Oryza brachyantha]
Length = 231
Score = 157 bits (397), Expect = 3e-36
Identities = 71/97 (73%), Positives = 86/97 (88%)
Frame = +3
Query: 3 SNILFVDCLPTDCTRREVSHLFRPFIGFKEIRVLHKEPRGAGDKAKVLCFVEFDDAKCAS 182
SNILFVDCLPTDCTRREV+HLFRPF+GFK+IR++HKEPR +GDKA VLCFVEF DAKCA
Sbjct: 126 SNILFVDCLPTDCTRREVAHLFRPFVGFKDIRLVHKEPRHSGDKAYVLCFVEFSDAKCAL 185
Query: 183 TALNALQGYKFDDKKSNAPVLQIQFVKFPFRPASLPN 293
TA+ ALQ Y FD+KK ++ VL+I+F +FPFRPA+ P+
Sbjct: 186 TAMEALQEYHFDEKKPDSAVLKIKFARFPFRPAAAPH 222
>ref|XP_002308540.2| hypothetical protein POPTR_0006s24130g [Populus trichocarpa]
gi|550336974|gb|EEE92063.2| hypothetical protein
POPTR_0006s24130g [Populus trichocarpa]
Length = 476
Score = 155 bits (392), Expect = 1e-35
Identities = 72/94 (76%), Positives = 82/94 (87%)
Frame = +3
Query: 3 SNILFVDCLPTDCTRREVSHLFRPFIGFKEIRVLHKEPRGAGDKAKVLCFVEFDDAKCAS 182
SNILFVD LPTDCTRREV HLFRPFIG+KEIRV+HKE R +GD+A VLCFVEF DA CA+
Sbjct: 173 SNILFVDGLPTDCTRREVGHLFRPFIGYKEIRVVHKEARKSGDRATVLCFVEFTDANCAA 232
Query: 183 TALNALQGYKFDDKKSNAPVLQIQFVKFPFRPAS 284
TA+ ALQGYKFDDKK ++P L+IQF +FPFRP S
Sbjct: 233 TAMEALQGYKFDDKKPDSPTLKIQFARFPFRPPS 266
>ref|XP_006474441.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like isoform X3
[Citrus sinensis]
Length = 242
Score = 153 bits (387), Expect = 4e-35
Identities = 69/91 (75%), Positives = 81/91 (89%)
Frame = +3
Query: 3 SNILFVDCLPTDCTRREVSHLFRPFIGFKEIRVLHKEPRGAGDKAKVLCFVEFDDAKCAS 182
SN+LFVD LPTDCTRREVSHLFRPF+G++EIRV+HKEPR +GD+A VLCFVEFDD KCA
Sbjct: 140 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRSGDRAMVLCFVEFDDPKCAR 199
Query: 183 TALNALQGYKFDDKKSNAPVLQIQFVKFPFR 275
TA++AL GYKFDDKK ++P L+IQF FPFR
Sbjct: 200 TAMDALHGYKFDDKKPDSPALKIQFAHFPFR 230
>ref|XP_006474439.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like isoform X1
[Citrus sinensis]
Length = 287
Score = 153 bits (387), Expect = 4e-35
Identities = 69/91 (75%), Positives = 81/91 (89%)
Frame = +3
Query: 3 SNILFVDCLPTDCTRREVSHLFRPFIGFKEIRVLHKEPRGAGDKAKVLCFVEFDDAKCAS 182
SN+LFVD LPTDCTRREVSHLFRPF+G++EIRV+HKEPR +GD+A VLCFVEFDD KCA
Sbjct: 185 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRSGDRAMVLCFVEFDDPKCAR 244
Query: 183 TALNALQGYKFDDKKSNAPVLQIQFVKFPFR 275
TA++AL GYKFDDKK ++P L+IQF FPFR
Sbjct: 245 TAMDALHGYKFDDKKPDSPALKIQFAHFPFR 275
>gb|AFK48970.1| unknown [Lotus japonicus]
Length = 229
Score = 153 bits (386), Expect = 5e-35
Identities = 70/92 (76%), Positives = 80/92 (86%)
Frame = +3
Query: 3 SNILFVDCLPTDCTRREVSHLFRPFIGFKEIRVLHKEPRGAGDKAKVLCFVEFDDAKCAS 182
SN+LFVD LP DCTRREV HLFRPFIG+K+IRV+HKEPR +GDKA VLCFVEFDD+KCA
Sbjct: 129 SNVLFVDVLPRDCTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAMVLCFVEFDDSKCAL 188
Query: 183 TALNALQGYKFDDKKSNAPVLQIQFVKFPFRP 278
TA+ ALQGYKFDDKK ++ L+IQF FPFRP
Sbjct: 189 TAMEALQGYKFDDKKPDSRTLKIQFAHFPFRP 220
>ref|XP_002280068.1| PREDICTED: uncharacterized protein LOC100257637 isoform 1 [Vitis
vinifera] gi|296081671|emb|CBI20676.3| unnamed protein
product [Vitis vinifera]
Length = 239
Score = 153 bits (386), Expect = 5e-35
Identities = 72/91 (79%), Positives = 79/91 (86%)
Frame = +3
Query: 3 SNILFVDCLPTDCTRREVSHLFRPFIGFKEIRVLHKEPRGAGDKAKVLCFVEFDDAKCAS 182
SNILFVD LP DCTRREV HLFRPFIGFKEIRV+HKEPR +GDKA VLCFVEF+DA C+
Sbjct: 138 SNILFVDGLPKDCTRREVGHLFRPFIGFKEIRVVHKEPRHSGDKAMVLCFVEFNDASCSR 197
Query: 183 TALNALQGYKFDDKKSNAPVLQIQFVKFPFR 275
TAL ALQGYKFDDKK ++P L+IQF FPFR
Sbjct: 198 TALEALQGYKFDDKKPDSPTLRIQFAHFPFR 228
>ref|XP_002516098.1| conserved hypothetical protein [Ricinus communis]
gi|223544584|gb|EEF46100.1| conserved hypothetical
protein [Ricinus communis]
Length = 243
Score = 152 bits (385), Expect = 7e-35
Identities = 71/99 (71%), Positives = 82/99 (82%)
Frame = +3
Query: 3 SNILFVDCLPTDCTRREVSHLFRPFIGFKEIRVLHKEPRGAGDKAKVLCFVEFDDAKCAS 182
SNILFVD LPTDCTRREV HLFRPFIG+K+I+V+H+EPR GDKA V CFVEF DAKCA
Sbjct: 139 SNILFVDGLPTDCTRREVGHLFRPFIGYKDIKVIHREPRRDGDKAMVYCFVEFADAKCAI 198
Query: 183 TALNALQGYKFDDKKSNAPVLQIQFVKFPFRPASLPNSQ 299
TA+ ALQGYKFDD++SN+PVL+I +FPFRP N Q
Sbjct: 199 TAMEALQGYKFDDRRSNSPVLRIHLARFPFRPPHDRNEQ 237
>ref|XP_006453055.1| hypothetical protein CICLE_v10009319mg [Citrus clementina]
gi|557556281|gb|ESR66295.1| hypothetical protein
CICLE_v10009319mg [Citrus clementina]
Length = 242
Score = 150 bits (380), Expect = 3e-34
Identities = 68/90 (75%), Positives = 79/90 (87%)
Frame = +3
Query: 3 SNILFVDCLPTDCTRREVSHLFRPFIGFKEIRVLHKEPRGAGDKAKVLCFVEFDDAKCAS 182
SN+LFVD LPTDCTRREVSHLFRPF+G++EIRV+HKEPR GD+A VLCFVEFDD KCA
Sbjct: 140 SNLLFVDGLPTDCTRREVSHLFRPFVGYREIRVIHKEPRRTGDRAMVLCFVEFDDPKCAR 199
Query: 183 TALNALQGYKFDDKKSNAPVLQIQFVKFPF 272
TA++AL GYKFDDKK ++P L+IQF FPF
Sbjct: 200 TAMDALYGYKFDDKKPDSPTLKIQFAHFPF 229
>gb|EEC80002.1| hypothetical protein OsI_21654 [Oryza sativa Indica Group]
Length = 232
Score = 150 bits (378), Expect = 4e-34
Identities = 68/97 (70%), Positives = 84/97 (86%)
Frame = +3
Query: 3 SNILFVDCLPTDCTRREVSHLFRPFIGFKEIRVLHKEPRGAGDKAKVLCFVEFDDAKCAS 182
SNILFVD LPTDCTRREV+HLFRPF+GFK+IR++HKEPR + D+A VLCFVEF DAKCA
Sbjct: 127 SNILFVDGLPTDCTRREVAHLFRPFVGFKDIRLVHKEPRHSSDRAYVLCFVEFSDAKCAI 186
Query: 183 TALNALQGYKFDDKKSNAPVLQIQFVKFPFRPASLPN 293
TA+ ALQ Y+FD++K +A VL I+F +FPFRPA+ P+
Sbjct: 187 TAMEALQEYRFDERKPDAAVLNIKFARFPFRPAAAPH 223
>ref|XP_004303492.1| PREDICTED: uncharacterized protein LOC101308481 [Fragaria vesca
subsp. vesca]
Length = 288
Score = 149 bits (377), Expect = 6e-34
Identities = 73/99 (73%), Positives = 81/99 (81%)
Frame = +3
Query: 3 SNILFVDCLPTDCTRREVSHLFRPFIGFKEIRVLHKEPRGAGDKAKVLCFVEFDDAKCAS 182
SNILFVD LPTDCTRREV HLFRPFIG++EIRV+HKEPR +GDKA VLCFVEF D KCA
Sbjct: 184 SNILFVDGLPTDCTRREVGHLFRPFIGYREIRVVHKEPRRSGDKAMVLCFVEFVDPKCAL 243
Query: 183 TALNALQGYKFDDKKSNAPVLQIQFVKFPFRPASLPNSQ 299
TA+ ALQGYKFDDKK N+ L+IQF FPFR S N +
Sbjct: 244 TAMEALQGYKFDDKKPNSLPLRIQFAHFPFRLPSDSNQK 282
>ref|XP_003557195.1| PREDICTED: uncharacterized protein LOC100823400 [Brachypodium
distachyon]
Length = 209
Score = 148 bits (374), Expect = 1e-33
Identities = 67/91 (73%), Positives = 82/91 (90%)
Frame = +3
Query: 3 SNILFVDCLPTDCTRREVSHLFRPFIGFKEIRVLHKEPRGAGDKAKVLCFVEFDDAKCAS 182
SNILFVD LPTDC RREV+HLFRPF+GFK++R++HKEPR +GDKA VLCFVEF+DAKCA
Sbjct: 105 SNILFVDGLPTDCKRREVAHLFRPFVGFKDLRLVHKEPRRSGDKAYVLCFVEFNDAKCAF 164
Query: 183 TALNALQGYKFDDKKSNAPVLQIQFVKFPFR 275
TA+ ALQ Y+FD++K +APVL+IQF +FPFR
Sbjct: 165 TAMQALQEYRFDERKPDAPVLKIQFARFPFR 195
>gb|EOY29962.1| RNA-binding family protein isoform 1 [Theobroma cacao]
Length = 410
Score = 145 bits (366), Expect = 1e-32
Identities = 66/91 (72%), Positives = 78/91 (85%)
Frame = +3
Query: 3 SNILFVDCLPTDCTRREVSHLFRPFIGFKEIRVLHKEPRGAGDKAKVLCFVEFDDAKCAS 182
SNILFVD LPTDCTRREV HLFRPF+G+KEI+V+HKEPR +GD+A VLCFVEF D+K A
Sbjct: 308 SNILFVDGLPTDCTRREVGHLFRPFLGYKEIKVIHKEPRHSGDRAMVLCFVEFHDSKFAR 367
Query: 183 TALNALQGYKFDDKKSNAPVLQIQFVKFPFR 275
A+ ALQGYKFDDKK ++P L++QF FPFR
Sbjct: 368 AAMQALQGYKFDDKKPDSPALRVQFAHFPFR 398
>ref|XP_003526036.1| PREDICTED: uncharacterized protein LOC100809186 [Glycine max]
Length = 228
Score = 145 bits (365), Expect = 1e-32
Identities = 67/91 (73%), Positives = 77/91 (84%)
Frame = +3
Query: 3 SNILFVDCLPTDCTRREVSHLFRPFIGFKEIRVLHKEPRGAGDKAKVLCFVEFDDAKCAS 182
SNILFV LP DCTRREV HLFRPFIG+K+IRV+HKEPR +GDKA LCFVEF D+KCA
Sbjct: 120 SNILFVGGLPNDCTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAMTLCFVEFVDSKCAL 179
Query: 183 TALNALQGYKFDDKKSNAPVLQIQFVKFPFR 275
TA+ ALQGYKFDDKK ++P L+I+F FPFR
Sbjct: 180 TAMEALQGYKFDDKKPDSPTLKIEFAHFPFR 210
>ref|XP_003603172.1| RNA-binding protein with multiple splicing [Medicago truncatula]
gi|355492220|gb|AES73423.1| RNA-binding protein with
multiple splicing [Medicago truncatula]
Length = 229
Score = 144 bits (362), Expect = 3e-32
Identities = 65/92 (70%), Positives = 77/92 (83%)
Frame = +3
Query: 3 SNILFVDCLPTDCTRREVSHLFRPFIGFKEIRVLHKEPRGAGDKAKVLCFVEFDDAKCAS 182
SNILFV LP DCTRREV HLFRPFIG+K+I+V+HKEPR +GDKA + CFVEF + KCA
Sbjct: 132 SNILFVGGLPKDCTRREVGHLFRPFIGYKDIKVVHKEPRRSGDKAMIFCFVEFTEPKCAL 191
Query: 183 TALNALQGYKFDDKKSNAPVLQIQFVKFPFRP 278
TA+ ALQGYKFDDKK ++P L+I+F FPFRP
Sbjct: 192 TAMEALQGYKFDDKKPDSPTLKIKFAHFPFRP 223
>ref|XP_004141330.1| PREDICTED: uncharacterized protein LOC101211987 [Cucumis sativus]
gi|449486681|ref|XP_004157367.1| PREDICTED:
uncharacterized protein LOC101228687 [Cucumis sativus]
Length = 246
Score = 143 bits (361), Expect = 4e-32
Identities = 69/103 (66%), Positives = 83/103 (80%)
Frame = +3
Query: 3 SNILFVDCLPTDCTRREVSHLFRPFIGFKEIRVLHKEPRGAGDKAKVLCFVEFDDAKCAS 182
SN+LFVD LPTDCTRREV HLFRPF+G+K+IRV+HKEPR GDKA VLCFVEF +AK +
Sbjct: 147 SNVLFVDGLPTDCTRREVGHLFRPFMGYKDIRVVHKEPRRTGDKAMVLCFVEFVEAKFSQ 206
Query: 183 TALNALQGYKFDDKKSNAPVLQIQFVKFPFRPASLPNSQT*RK 311
A+ ALQGYKFDDKK ++PVL+IQF FPF LP++ R+
Sbjct: 207 AAMEALQGYKFDDKKPDSPVLKIQFAHFPFH---LPSNHDDRR 246
>gb|ESW08854.1| hypothetical protein PHAVU_009G079800g [Phaseolus vulgaris]
Length = 218
Score = 143 bits (360), Expect = 5e-32
Identities = 71/101 (70%), Positives = 81/101 (80%), Gaps = 1/101 (0%)
Frame = +3
Query: 3 SNILFVDCLPTDCTRREVSHLFRPFIGFKEIRVLHKEPRGAGDKAKVLCFVEFDDAKCAS 182
SNILFV LP +CTRREV HLFRPFIG+K+IRV+HKEPR +GDKA LCFVEF D+KCA
Sbjct: 117 SNILFVGGLPNNCTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAVTLCFVEFLDSKCAL 176
Query: 183 TALNALQGYKFDDKKSNAPVLQIQFVKFPFR-PASLPNSQT 302
TAL ALQGYKFDDK ++P L+IQF FPFR P+ NS T
Sbjct: 177 TALEALQGYKFDDKLPDSPTLKIQFAHFPFRLPSEHGNSLT 217
>ref|XP_004501453.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Cicer
arietinum]
Length = 226
Score = 142 bits (359), Expect = 7e-32
Identities = 64/92 (69%), Positives = 78/92 (84%)
Frame = +3
Query: 3 SNILFVDCLPTDCTRREVSHLFRPFIGFKEIRVLHKEPRGAGDKAKVLCFVEFDDAKCAS 182
SNILFV LP DCTRREV HLFRPFIG+K+I+++HKEPR +GDK+ +LCFVEF + KCA
Sbjct: 129 SNILFVGGLPKDCTRREVGHLFRPFIGYKDIKLVHKEPRRSGDKSMILCFVEFTEPKCAL 188
Query: 183 TALNALQGYKFDDKKSNAPVLQIQFVKFPFRP 278
TA+ ALQGYKFDDKK ++ +L+IQF FPFRP
Sbjct: 189 TAMEALQGYKFDDKKPDSSILKIQFAHFPFRP 220
>ref|XP_004964565.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like isoform X3
[Setaria italica]
Length = 256
Score = 141 bits (355), Expect = 2e-31
Identities = 66/91 (72%), Positives = 79/91 (86%)
Frame = +3
Query: 3 SNILFVDCLPTDCTRREVSHLFRPFIGFKEIRVLHKEPRGAGDKAKVLCFVEFDDAKCAS 182
SNILFVD LPTDCTRREV+HLFR F GFK+IRV+HKEPR +GDKA VLCFVEFDDAK A
Sbjct: 152 SNILFVDGLPTDCTRREVAHLFRLFDGFKDIRVVHKEPRHSGDKAYVLCFVEFDDAKRAR 211
Query: 183 TALNALQGYKFDDKKSNAPVLQIQFVKFPFR 275
TA+ L+ Y+FDD+K ++P+L+IQF +FPFR
Sbjct: 212 TAMEKLRAYRFDDRKPDSPLLEIQFARFPFR 242
>ref|XP_004964564.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like isoform X2
[Setaria italica]
Length = 257
Score = 141 bits (355), Expect = 2e-31
Identities = 66/91 (72%), Positives = 79/91 (86%)
Frame = +3
Query: 3 SNILFVDCLPTDCTRREVSHLFRPFIGFKEIRVLHKEPRGAGDKAKVLCFVEFDDAKCAS 182
SNILFVD LPTDCTRREV+HLFR F GFK+IRV+HKEPR +GDKA VLCFVEFDDAK A
Sbjct: 153 SNILFVDGLPTDCTRREVAHLFRLFDGFKDIRVVHKEPRHSGDKAYVLCFVEFDDAKRAR 212
Query: 183 TALNALQGYKFDDKKSNAPVLQIQFVKFPFR 275
TA+ L+ Y+FDD+K ++P+L+IQF +FPFR
Sbjct: 213 TAMEKLRAYRFDDRKPDSPLLEIQFARFPFR 243
>ref|NP_001242381.1| uncharacterized protein LOC100816255 [Glycine max]
gi|255647054|gb|ACU23995.1| unknown [Glycine max]
Length = 220
Score = 139 bits (351), Expect = 6e-31
Identities = 69/99 (69%), Positives = 78/99 (78%), Gaps = 1/99 (1%)
Frame = +3
Query: 3 SNILFVDCLPTDCTRREVSHLFRPFIGFKEIRVLHKEPRGAGDKAKVLCFVEFDDAKCAS 182
SNILFV LP DCTRREV HLFRPFIG+K+IRV+HKEPR +GDKA LCFVEF D+ CA
Sbjct: 119 SNILFVGGLPKDCTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAMTLCFVEFVDSNCAL 178
Query: 183 TALNALQGYKFDDKKSNAPVLQIQFVKFPFR-PASLPNS 296
TAL LQGYKFDDKK ++P L+IQ FPFR P+ NS
Sbjct: 179 TALETLQGYKFDDKKPDSPTLKIQPAHFPFRLPSDHGNS 217