BLASTX nr result
ID: Zingiber25_contig00029676
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00029676
(1676 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004246209.1| PREDICTED: pentatricopeptide repeat-containi... 218 8e-54
ref|NP_001059279.1| Os07g0244400 [Oryza sativa Japonica Group] g... 211 1e-51
gb|EAZ03360.1| hypothetical protein OsI_25499 [Oryza sativa Indi... 208 5e-51
ref|XP_006657585.1| PREDICTED: pentatricopeptide repeat-containi... 199 4e-48
gb|EOY32970.1| Pentatricopeptide repeat-containing protein, puta... 198 5e-48
ref|XP_006437483.1| hypothetical protein CICLE_v10033975mg [Citr... 194 1e-46
ref|XP_002461747.1| hypothetical protein SORBIDRAFT_02g007340 [S... 194 1e-46
gb|AFK33630.1| unknown [Lotus japonicus] 193 2e-46
ref|XP_003557346.1| PREDICTED: pentatricopeptide repeat-containi... 192 3e-46
ref|NP_001131386.1| hypothetical protein [Zea mays] gi|194691388... 192 3e-46
ref|XP_004955884.1| PREDICTED: pentatricopeptide repeat-containi... 192 5e-46
ref|XP_003631528.1| PREDICTED: pentatricopeptide repeat-containi... 190 1e-45
ref|XP_004512307.1| PREDICTED: pentatricopeptide repeat-containi... 189 4e-45
gb|ESW30051.1| hypothetical protein PHAVU_002G120500g [Phaseolus... 186 3e-44
ref|XP_003612457.1| Pentatricopeptide repeat-containing protein ... 184 1e-43
ref|XP_006303657.1| hypothetical protein CARUB_v10011695mg [Caps... 182 3e-43
ref|XP_003516509.1| PREDICTED: pentatricopeptide repeat-containi... 182 3e-43
ref|XP_002893686.1| pentatricopeptide repeat-containing protein ... 181 1e-42
ref|NP_174459.1| pentatricopeptide repeat-containing protein [Ar... 178 5e-42
ref|XP_002519945.1| pentatricopeptide repeat-containing protein,... 176 3e-41
>ref|XP_004246209.1| PREDICTED: pentatricopeptide repeat-containing protein At1g31790-like
[Solanum lycopersicum]
Length = 465
Score = 218 bits (554), Expect = 8e-54
Identities = 125/350 (35%), Positives = 200/350 (57%), Gaps = 2/350 (0%)
Frame = +2
Query: 302 MDALRLPVEEDLYLSLIKECAESKNASHGAALYSHVRRTCXXXXXXXXXXXXXNRFLQLF 481
MD+L + D+Y+SLIKEC ES++ + +Y HV ++ NR L +
Sbjct: 1 MDSLGFNIPVDVYVSLIKECTESRDPLNAVEVYEHVCKS-----DVIPSLPLLNRLLLML 55
Query: 482 AAYGCSSAVLRLFDQMPLRDATSFAVVISSLSADGSHRQALHVFVEMHMRTGD--RCLPV 655
GC +LFD+M +R++ S+A +I+ +G AL +F+EM G+ +C +
Sbjct: 56 VLCGCFEQARQLFDKMRVRNSQSWAAMIAGCVENGECVGALRLFMEMQSEAGNLCKCGDL 115
Query: 656 LEPRVCWLAALGVILRSCVHAGELYFGLQLHGLVIKVLGSCEGAVFGDLEDSLLQFYSKF 835
++ + L +L++CV L FG Q+HG ++K LG+CE V L L++FY +F
Sbjct: 116 IDDGI-----LVCVLKACVELMNLEFGRQIHGWLLK-LGNCESMV---LNSFLIKFYGEF 166
Query: 836 QHQENAMSVFKRAISVSRSAGSWTSMITGYYRQGQFKEAIYLFREMGRAGKKRNFYILSS 1015
+ E+A +VF + WT+ I ++ QF+ AI +FREM G K+N + SS
Sbjct: 167 GYLESADNVFDHVPHCNTVV--WTARIGNLCKEEQFEGAIRIFREMVSEGVKKNSFTFSS 224
Query: 1016 TLPACAKMRDAGWSGKQVHAIAIKLGASSDKFVCSSLVDMYMKHELPIEGQRAFDSMDGL 1195
L AC K+RDAG G+Q+HA ++K+G +D +V SL+DMY K+ L + +R F++ +
Sbjct: 225 ILKACGKLRDAGCCGQQIHATSVKVGLDTDSYVLCSLIDMYGKYGLLKDARRVFNAREDK 284
Query: 1196 RDYVCWNALLIGYAQRGYVVDAAKLLNKMKANGIEPQESTVNHFLMAFNG 1345
+ CWNA+L+G Q G+ V+A K+L +MK G++P ES +N L+A G
Sbjct: 285 SNIACWNAMLMGCIQHGFGVEAMKVLYEMKEAGLQPHESLINEVLLASTG 334
>ref|NP_001059279.1| Os07g0244400 [Oryza sativa Japonica Group]
gi|24417179|dbj|BAC22540.1| putative pentatricopeptide
repeat-containing protein [Oryza sativa Japonica Group]
gi|50508329|dbj|BAD30147.1| putative pentatricopeptide
repeat-containing protein [Oryza sativa Japonica Group]
gi|113610815|dbj|BAF21193.1| Os07g0244400 [Oryza sativa
Japonica Group] gi|125599686|gb|EAZ39262.1| hypothetical
protein OsJ_23686 [Oryza sativa Japonica Group]
Length = 435
Score = 211 bits (536), Expect = 1e-51
Identities = 142/436 (32%), Positives = 223/436 (51%), Gaps = 15/436 (3%)
Frame = +2
Query: 74 ATRWSPTSRK----SLSRPTAQESFQLISLRRPRQPPTGNQPIPLPDNP----SSQKKVF 229
A R SP R+ + + TA+ + L +LR+P +PP P P P SS
Sbjct: 18 APRLSPRRRRRRLLAANATTARGALPLPALRKPTKPPPPPPLHPRPSLPVPTTSSDDDGD 77
Query: 230 EICNXXXXXXXXXXXXXXXXVLMLMDALRLPVEEDLYLSLIKECAESKNASHGAALYSHV 409
VL L+DALRLP +ED+Y+SL+++CA+ A+ A++++H+
Sbjct: 78 IRRKPATGATASLCSSGAGDVLRLLDALRLPPDEDVYVSLLRDCAD---AAEVASVHAHI 134
Query: 410 RRTCXXXXXXXXXXXXXNRFLQLFAAYGCSSAVLRLFDQMPLRDATSFAVVISSLSADGS 589
NR + +AA G A ++FD+MP+++ ++A ++S+ S
Sbjct: 135 ---AGKFAVSGLPLPLANRLVLAYAACGDIGAARQVFDEMPVKNGITWATMVSAYSDGCF 191
Query: 590 HRQALHVFVEMHMR----TGDRCLPVLEPRVCWLAALGVILRSCVHAGELYFGLQLHGLV 757
H AL +FV+M + TGD + A+ +LRSC EL FG Q+H V
Sbjct: 192 HHDALQLFVQMCHQVRGITGDH----------YTHAIVAVLRSCARVNELQFGEQVHAFV 241
Query: 758 IKVLGSCEGAVFGDLEDSLLQFY---SKFQHQENAMSVFKRAISVSRSAGSWTSMITGYY 928
+K G C GD+ SLLQ Y + + + + + + +WTS+IT Y+
Sbjct: 242 VKKNGVC-----GDVGSSLLQLYCDSGQLSSARHVLEMMRFSCQEPVPEAAWTSLITAYH 296
Query: 929 RQGQFKEAIYLFREMGRAGKKRNFYILSSTLPACAKMRDAGWSGKQVHAIAIKLGASSDK 1108
R G +AI +FR M +G R+ + LSS L CA+ ++ G G+QVHA AIK G ++
Sbjct: 297 RDGILDDAIDVFRGMASSGIARSSFSLSSILAVCAEAKNKGCYGQQVHADAIKRGLDMNQ 356
Query: 1109 FVCSSLVDMYMKHELPIEGQRAFDSMDGLRDYVCWNALLIGYAQRGYVVDAAKLLNKMKA 1288
FV S L+ MY K + RAF+++DG D VCWNA+ + YA+ G +A +++ +MKA
Sbjct: 357 FVGSGLLHMYAKEGQLADAARAFEAIDGKPDAVCWNAMAMAYARGGMYREATRVVYQMKA 416
Query: 1289 NGIEPQESTVNHFLMA 1336
G+ P + T+N +A
Sbjct: 417 AGMNPSKLTMNEVKLA 432
>gb|EAZ03360.1| hypothetical protein OsI_25499 [Oryza sativa Indica Group]
Length = 436
Score = 208 bits (530), Expect = 5e-51
Identities = 141/440 (32%), Positives = 223/440 (50%), Gaps = 19/440 (4%)
Frame = +2
Query: 74 ATRWSPTSRK-----SLSRPTAQESFQLISLRRPRQPPTGNQPIPLPDNPSSQKKVFEIC 238
A R SP R+ + + TA+ + L +LR+P +PP P PLP PS
Sbjct: 18 APRLSPRRRRRRRLLAANVTTARGALPLPALRKPTKPPL---PPPLPPRPSLPVPTTSSD 74
Query: 239 NXXXXXXXXXXXXXXXX-------VLMLMDALRLPVEEDLYLSLIKECAESKNASHGAAL 397
+ VL L+DALRLP +ED+Y+SL+++CA+ A+ A++
Sbjct: 75 DDGDIRRKPATGATASLCSSGAGDVLRLLDALRLPPDEDVYVSLLRDCAD---AAEVASV 131
Query: 398 YSHVRRTCXXXXXXXXXXXXXNRFLQLFAAYGCSSAVLRLFDQMPLRDATSFAVVISSLS 577
++H+ NR + +AA G A ++FD+ P+++ ++A ++S+ S
Sbjct: 132 HAHI---AGKFAVSGLPLPLANRLVLAYAACGDIGAARQVFDETPVKNGITWATMVSAYS 188
Query: 578 ADGSHRQALHVFVEMHMR----TGDRCLPVLEPRVCWLAALGVILRSCVHAGELYFGLQL 745
H AL +F +M + TGD + A+ +LRSC EL FG Q+
Sbjct: 189 DGCFHHDALQLFAQMCHQVRGITGDH----------YTHAIVAVLRSCARVNELQFGEQV 238
Query: 746 HGLVIKVLGSCEGAVFGDLEDSLLQFY---SKFQHQENAMSVFKRAISVSRSAGSWTSMI 916
H V+K G C GD+ SLLQ Y + + + + + + +WTS+I
Sbjct: 239 HAFVVKKNGVC-----GDVGSSLLQLYCDSGQLSSARHVLEMMRFSCQEPVPEAAWTSLI 293
Query: 917 TGYYRQGQFKEAIYLFREMGRAGKKRNFYILSSTLPACAKMRDAGWSGKQVHAIAIKLGA 1096
T Y+R G +AI +FR M +G R+ + LSS L CA+ ++ G G+QVHA AIK G
Sbjct: 294 TAYHRDGILDDAIDVFRGMASSGIARSSFSLSSILAVCAEAKNKGCYGQQVHADAIKRGL 353
Query: 1097 SSDKFVCSSLVDMYMKHELPIEGQRAFDSMDGLRDYVCWNALLIGYAQRGYVVDAAKLLN 1276
++FV S L+ MY K + RAF+++DG D VCWNA+ + YA+ G +A +++
Sbjct: 354 DMNQFVGSGLLHMYAKEGQLADAARAFEAIDGKPDAVCWNAMAMAYARGGMYREATRVVY 413
Query: 1277 KMKANGIEPQESTVNHFLMA 1336
+MKA G+ P + T+N +A
Sbjct: 414 QMKAAGMNPSKLTMNEVKLA 433
>ref|XP_006657585.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18520-like
[Oryza brachyantha]
Length = 437
Score = 199 bits (505), Expect = 4e-48
Identities = 122/356 (34%), Positives = 196/356 (55%), Gaps = 7/356 (1%)
Frame = +2
Query: 290 VLMLMDALRLPVEEDLYLSLIKECAESKNASHGAALYSHVRRTCXXXXXXXXXXXXXNRF 469
VL L+DALRLP +ED+Y+SL+++CA+ A+ A++++H+ + NR
Sbjct: 100 VLRLLDALRLPPDEDVYVSLLRDCAD---AAEVASVHAHIAGSLAVSGLPLPLA---NRL 153
Query: 470 LQLFAAYGCSSAVLRLFDQMPLRDATSFAVVISSLSADGSHRQALHVFVEMHMR----TG 637
+ +AA G + ++FD+MP+++ ++A ++S+ S H AL +F +M + TG
Sbjct: 154 VLAYAACGDTGTARQVFDEMPVKNGITWATMVSAYSDGCFHHDALRLFAQMCHQVQGLTG 213
Query: 638 DRCLPVLEPRVCWLAALGVILRSCVHAGELYFGLQLHGLVIKVLGSCEGAVFGDLEDSLL 817
D + A+ +LRSC EL FG Q+H ++K G C GD+ SLL
Sbjct: 214 DH----------YTHAIVAVLRSCARVDELDFGEQVHAFLVKKNGVC-----GDVGSSLL 258
Query: 818 QFYSKFQHQENAMSVFKRAISVSRSA---GSWTSMITGYYRQGQFKEAIYLFREMGRAGK 988
Q Y + Q +A V + S S +WTS+I + G +AI +FR+M +G
Sbjct: 259 QLYCHCRQQSSARHVLQMMRSSSEEPVPEAAWTSLIKASHHDGCLDDAIDIFRDMASSGI 318
Query: 989 KRNFYILSSTLPACAKMRDAGWSGKQVHAIAIKLGASSDKFVCSSLVDMYMKHELPIEGQ 1168
R+ + LSS L CA+ + G G+QVHA AIK G ++FV S L+ MY K +
Sbjct: 319 LRSSFSLSSILAVCAEAKGKGCYGQQVHADAIKRGLDMNQFVGSGLLHMYAKQGQLEDAA 378
Query: 1169 RAFDSMDGLRDYVCWNALLIGYAQRGYVVDAAKLLNKMKANGIEPQESTVNHFLMA 1336
RAFD++ G D VCW+A+ + YA+ G +A +++ +MKA+G++P E +N +A
Sbjct: 379 RAFDAIGGTPDAVCWSAMAMAYARGGMYREATRVVYQMKASGMDPSELMMNEVKLA 434
>gb|EOY32970.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
cacao]
Length = 413
Score = 198 bits (504), Expect = 5e-48
Identities = 139/429 (32%), Positives = 210/429 (48%), Gaps = 6/429 (1%)
Frame = +2
Query: 68 LPATRWSPTSRKSLSRPTAQESFQLI------SLRRPRQPPTGNQPIPLPDNPSSQKKVF 229
LP+ + + S+ + + P +Q QL S + P P + P+ NP S
Sbjct: 19 LPSNKLTFRSQATPAPPISQLHSQLPLRITKQSSKTPPPPTPISTSKPISSNPCSSHTTS 78
Query: 230 EICNXXXXXXXXXXXXXXXXVLMLMDALRLPVEEDLYLSLIKECAESKNASHGAALYSHV 409
+I L LMD+L LP+ D+Y SL+KEC ++++ L+SH+
Sbjct: 79 DI-------------------LRLMDSLSLPIPPDIYASLVKECTVTRHSRRALELHSHI 119
Query: 410 RRTCXXXXXXXXXXXXXNRFLQLFAAYGCSSAVLRLFDQMPLRDATSFAVVISSLSADGS 589
R + NR L + + G LFDQM LRD S+A++I + G
Sbjct: 120 RNS-----RIKPSLPLLNRLLLMHVSCGHLDIARHLFDQMLLRDFNSWAIMIVACLHAGD 174
Query: 590 HRQALHVFVEMHMRTGDRCLPVLEPRVCWLAALGVILRSCVHAGELYFGLQLHGLVIKVL 769
QA+ FV M +L W+ +L+SCV + G Q+HG ++K+
Sbjct: 175 SEQAIAYFVRMERHN------LLFKCPSWIIVC--LLKSCVVTKNMGLGKQVHGQLLKLG 226
Query: 770 GSCEGAVFGDLEDSLLQFYSKFQHQENAMSVFKRAISVSRSAGSWTSMITGYYRQGQFKE 949
S + ++ G SL+ FY KF+ ++A VF + R+ +WT+ I R+ QF +
Sbjct: 227 ASNDSSLSG----SLINFYGKFRCLDDADFVFNQLSR--RNTVTWTARIVNSCREDQFGK 280
Query: 950 AIYLFREMGRAGKKRNFYILSSTLPACAKMRDAGWSGKQVHAIAIKLGASSDKFVCSSLV 1129
I F EMGR G K+N + S ACA+M D G SG+QVHA A+KLG SD FV L+
Sbjct: 281 VIDDFNEMGRQGIKKNNFTFSGVFKACARMDDDGMSGRQVHANALKLGLESDVFVQCGLI 340
Query: 1130 DMYMKHELPIEGQRAFDSMDGLRDYVCWNALLIGYAQRGYVVDAAKLLNKMKANGIEPQE 1309
+Y K + ++AF+ + R+ CWNA+L+GY + A KLL +MK GI+ QE
Sbjct: 341 HLYGKCGSVRDAEKAFEIVGDKRNIACWNAMLMGYVHNELCLRAIKLLYRMKEAGIKVQE 400
Query: 1310 STVNHFLMA 1336
S +N +A
Sbjct: 401 SLINDVRIA 409
>ref|XP_006437483.1| hypothetical protein CICLE_v10033975mg [Citrus clementina]
gi|557539679|gb|ESR50723.1| hypothetical protein
CICLE_v10033975mg [Citrus clementina]
Length = 425
Score = 194 bits (493), Expect = 1e-46
Identities = 125/349 (35%), Positives = 182/349 (52%)
Frame = +2
Query: 290 VLMLMDALRLPVEEDLYLSLIKECAESKNASHGAALYSHVRRTCXXXXXXXXXXXXXNRF 469
+L LMD L LP+ D+Y LIKEC K+++ L +H+R+ NR
Sbjct: 72 ILHLMDNLCLPITTDMYTCLIKECTFQKDSAGAFELLNHIRKRVNIKPTLLFL----NRL 127
Query: 470 LQLFAAYGCSSAVLRLFDQMPLRDATSFAVVISSLSADGSHRQALHVFVEMHMRTGDRCL 649
L + + G +LFD+MPLRD S+AV+I +++ + +F EM R L
Sbjct: 128 LLMHVSCGQLDTARQLFDEMPLRDFNSWAVMIVGYVDVADYQECITLFAEMMKRKKGHML 187
Query: 650 PVLEPRVCWLAALGVILRSCVHAGELYFGLQLHGLVIKVLGSCEGAVFGDLEDSLLQFYS 829
V W+ +L++CV + G Q+HGL+ K LGS L SL+ FY
Sbjct: 188 LVFP---AWIIVC--VLKACVCTMNMELGKQVHGLLFK-LGSSRNI---SLTGSLINFYG 238
Query: 830 KFQHQENAMSVFKRAISVSRSAGSWTSMITGYYRQGQFKEAIYLFREMGRAGKKRNFYIL 1009
KF+ E+A VF + + WT+ I R+G F + F+EMGR K+N Y
Sbjct: 239 KFRCLEDADFVFSQL--KRHNTVVWTAKIVNNCREGHFHQVFNDFKEMGRERIKKNSYTF 296
Query: 1010 SSTLPACAKMRDAGWSGKQVHAIAIKLGASSDKFVCSSLVDMYMKHELPIEGQRAFDSMD 1189
SS L AC + D G G+QVHA +K+G SD++V LVDMY K L + +R F+ +
Sbjct: 297 SSVLKACGGVDDDGNCGRQVHANIVKIGLESDEYVQCGLVDMYGKCRLLRDAKRVFELIV 356
Query: 1190 GLRDYVCWNALLIGYAQRGYVVDAAKLLNKMKANGIEPQESTVNHFLMA 1336
++ WNA+L+GY + G V+A K L MKA+GI+ QES +N +A
Sbjct: 357 DKKNIASWNAMLMGYIRNGLYVEATKFLYLMKASGIQIQESLINDLRIA 405
>ref|XP_002461747.1| hypothetical protein SORBIDRAFT_02g007340 [Sorghum bicolor]
gi|241925124|gb|EER98268.1| hypothetical protein
SORBIDRAFT_02g007340 [Sorghum bicolor]
Length = 442
Score = 194 bits (493), Expect = 1e-46
Identities = 128/355 (36%), Positives = 194/355 (54%), Gaps = 6/355 (1%)
Frame = +2
Query: 290 VLMLMDALRLPVEEDLYLSLIKECAESKNASHGAALYSHVRRTCXXXXXXXXXXXXXNRF 469
VL LMDAL +P +ED+Y+SL++ECA+ A+ A++++H+ C NR
Sbjct: 102 VLRLMDALGIPPDEDIYISLLRECAD---AAEVASVHAHMTACCASDALPSPVA---NRV 155
Query: 470 LQLFAAYGCSSAVLRLFDQMPLRDATSFAVVISSLSADGSHRQALHVFVEMHMRTGDRCL 649
L +AA G A R+FD MP R+ ++A ++S+ S H +A+ +F M RT
Sbjct: 156 LLSYAACGDIEAARRVFDGMPDRNGMAWATMVSAYSDGCFHHEAMRLFAHMCHRT----- 210
Query: 650 PVLEPRVCWLAALGVILRSCVHAGELYFGLQLHGLVIKVLGSCEGAVFGDLEDSLLQFYS 829
VL+ C A L V LRSC+ AGEL G Q+H LVIK +G + GD+ SL+Q Y
Sbjct: 211 LVLDGDCCSHAILAV-LRSCIRAGELRLGEQVHALVIK-----KGRILGDIGSSLVQLYC 264
Query: 830 KFQHQENA-----MSVFKRAISVSRSAGSWTSMITGYYRQGQFKEAIYLFREMGRAGKKR 994
+ + + + + +WTS+IT +R GQ EAI +FR+M +G R
Sbjct: 265 ESSGLHRSARRVLVMMMQHHCQEPVPEAAWTSLITCCHRDGQLSEAIDVFRDMASSGVPR 324
Query: 995 NFYILSSTLPACAKMRDAGWS-GKQVHAIAIKLGASSDKFVCSSLVDMYMKHELPIEGQR 1171
+ + LSS L A+ ++ G G+QVHA AIK G +++FV S LV MY K + R
Sbjct: 325 SSFSLSSILAVFAESQNQGCCCGQQVHADAIKRGVDTNQFVGSGLVHMYAKQGWLADAVR 384
Query: 1172 AFDSMDGLRDYVCWNALLIGYAQRGYVVDAAKLLNKMKANGIEPQESTVNHFLMA 1336
AF ++ G D CW+AL + YA+ G +A +++ +MKA G+ P + + +A
Sbjct: 385 AFGAIGGKPDTACWSALALAYARGGRYREATRVMYQMKAAGMTPSQEMADAVRLA 439
>gb|AFK33630.1| unknown [Lotus japonicus]
Length = 356
Score = 193 bits (490), Expect = 2e-46
Identities = 119/350 (34%), Positives = 190/350 (54%), Gaps = 1/350 (0%)
Frame = +2
Query: 290 VLMLMDALRLPVEEDLYLSLIKECAESKNASHGAALYSHVRRTCXXXXXXXXXXXXXNRF 469
+L LMD L P+ D+Y SLIKEC S + L++H+ + NR
Sbjct: 17 ILHLMDVLPFPIPIDIYTSLIKECTLSPDPQTAIELHTHIAHS-----GIKPPLSFINRI 71
Query: 470 LQLFAAYGCSSAVLRLFDQMPLRDATSFAVVISSLSADGSHRQALHVFVEMHMRTGDRCL 649
L +F + G +LFD MP++D S+A + + + + +A+ VF+ M + G
Sbjct: 72 LVMFVSCGLLDYACQLFDAMPVKDFNSWATLFIAYYDNADYEEAIDVFLAMLHQLGMSEF 131
Query: 650 PVLEPRVCWLAALGVILRSCVHAGELYFGLQLHGLVIKVLGSCEGAVFGDLEDSLLQFYS 829
P P +C L++C + G+Q+HG ++K LG+C+ + L SL++FY
Sbjct: 132 P---PWIC-----ACFLKACACIENIPLGMQVHGWLLK-LGTCDHVL---LSSSLIRFYG 179
Query: 830 KFQHQENAMSVFKRAISVSR-SAGSWTSMITGYYRQGQFKEAIYLFREMGRAGKKRNFYI 1006
+F ++A +VF + +SR + +WT+ I R+ F E F+EMGR G K++ Y
Sbjct: 180 RFTCVKDANAVFNK---LSRHNTSTWTAKIVSGCREMDFPEVFNDFKEMGRQGIKKDTYT 236
Query: 1007 LSSTLPACAKMRDAGWSGKQVHAIAIKLGASSDKFVCSSLVDMYMKHELPIEGQRAFDSM 1186
SS L AC KM D G G+QVHA A+KLG +SD +V SL+ MY + L + ++ F++
Sbjct: 237 FSSVLKACGKMMDHGRCGEQVHADAMKLGLASDNYVQCSLIAMYGRSGLLRDAKQVFETS 296
Query: 1187 DGLRDYVCWNALLIGYAQRGYVVDAAKLLNKMKANGIEPQESTVNHFLMA 1336
R+ WNA+L+GY + G ++A K L +MKA G++P ES ++ +A
Sbjct: 297 RSERNVDSWNAMLMGYLENGLYIEAVKFLYQMKAAGLKPHESLLDKVRIA 346
>ref|XP_003557346.1| PREDICTED: pentatricopeptide repeat-containing protein At1g31790-like
[Brachypodium distachyon]
Length = 435
Score = 192 bits (489), Expect = 3e-46
Identities = 124/356 (34%), Positives = 191/356 (53%), Gaps = 7/356 (1%)
Frame = +2
Query: 290 VLMLMDALRLPVEEDLYLSLIKECAESKNASHGAALYSHVRRTCXXXXXXXXXXXXXNRF 469
VL LMDAL++ +E +Y+SL+++ A+ A+ AA+++H+ NR
Sbjct: 98 VLRLMDALQVAPDEAVYVSLLRDSAD---AAEVAAVHAHI---AGRRDAFGLLRPLANRL 151
Query: 470 LQLFAAYGCSSAVLRLFDQMPLRDATSFAVVISSLSADGSHRQALHVFVEM----HMRTG 637
L +A+ G ++A ++FD+MP++D ++A ++S+ S H +A+ +F M TG
Sbjct: 152 LHSYASCGDTAAARKVFDEMPVKDDIAWATMVSAYSDGCFHNEAIRLFTRMCHEAQELTG 211
Query: 638 DRCLPVLEPRVCWLAALGVILRSCVHAGELYFGLQLHGLVIKVLGSCEGAVFGDLEDSLL 817
D C A+ +LRSC ++ FG Q+H LV+K G C GD SLL
Sbjct: 212 D----------CHDRAIVAVLRSCARVSKISFGEQVHALVVKKKGVC-----GDAGSSLL 256
Query: 818 QFYSKFQHQENAMSVFKRAISVSRSA---GSWTSMITGYYRQGQFKEAIYLFREMGRAGK 988
Q Y + ++A V + + +WTS IT +R GQ EAI FR+M +G
Sbjct: 257 QLYCESNRHDSARQVLEMMRCSCQEPVPEAAWTSFITACHRVGQLDEAIDAFRDMVSSGV 316
Query: 989 KRNFYILSSTLPACAKMRDAGWSGKQVHAIAIKLGASSDKFVCSSLVDMYMKHELPIEGQ 1168
R+ + LSS L CA+ + G+QVHA AIK +++FV S LV MY K +
Sbjct: 317 TRSSFSLSSILTVCAESDNHRCYGQQVHADAIKHSLETNQFVMSGLVHMYAKQGRLADAA 376
Query: 1169 RAFDSMDGLRDYVCWNALLIGYAQRGYVVDAAKLLNKMKANGIEPQESTVNHFLMA 1336
RAF++ G D VCWNA+ +GYA+ G +A +++ +MKA GI+P T+N MA
Sbjct: 377 RAFETSGGEPDAVCWNAMAMGYARGGCYREATRMMYQMKAAGIDPPGPTMNVVRMA 432
>ref|NP_001131386.1| hypothetical protein [Zea mays] gi|194691388|gb|ACF79778.1| unknown
[Zea mays] gi|414884126|tpg|DAA60140.1| TPA: hypothetical
protein ZEAMMB73_895402 [Zea mays]
Length = 438
Score = 192 bits (489), Expect = 3e-46
Identities = 137/449 (30%), Positives = 220/449 (48%), Gaps = 16/449 (3%)
Frame = +2
Query: 38 CNGGSPLVVRLPATRWSPTSRKSLSRPT----AQESFQLISLRRPRQPPT---GNQPIPL 196
C+ PL R + R+ + T A +L +L +P +PP +P+
Sbjct: 4 CSVAKPLCATTATPRLTRRCRQLSANATTPAMATSKARLPALNKPAKPPPPLLSRPKLPV 63
Query: 197 PDNPSSQKKVFEICNXXXXXXXXXXXXXXXX---VLMLMDALRLPVEEDLYLSLIKECAE 367
P N ++ + C VL LMDAL +P +ED+Y+SL++ECA+
Sbjct: 64 PTNTATDTTSGKDCTKKPPPEATDSHPPSSGAGDVLRLMDALGIPPDEDIYISLLRECAD 123
Query: 368 SKNASHGAALYSHVRRTCXXXXXXXXXXXXXNRFLQLFAAYGCSSAVLRLFDQMPLRDAT 547
A+ A++++H+ NR L +AA G A R+FD MP +
Sbjct: 124 ---AAEVASVHAHITAR---RASDGLPSPVANRLLLSYAACGDIEAARRVFDGMPTTNGM 177
Query: 548 SFAVVISSLSADGSHRQALHVFVEMHMRTGDRCLPVLEPRVCWLAALGVILRSCVHAGEL 727
++A ++S+ S H +A+ +F M T PVL+ C+ A+ +LRSC AGEL
Sbjct: 178 AWATMVSAYSDGCLHHEAMRLFAHMCHGT-----PVLDGD-CYSHAIVAVLRSCTRAGEL 231
Query: 728 YFGLQLHGLVIKVLGSCEGAVFGDLEDSLLQFYSK---FQHQENAM--SVFKRAISVSRS 892
G Q+H LV+K +G + GD+ SL+Q Y F + + +
Sbjct: 232 RLGEQVHALVVK-----KGRIHGDIGSSLVQLYCDGGGFHRSARRVLATTMQHHCQEPVP 286
Query: 893 AGSWTSMITGYYRQGQFKEAIYLFREMGRAGKKRNFYILSSTLPACAKMRDAGWS-GKQV 1069
+WTS+IT +R+ EA+ +FR+M +G R+ + LSS L A+ +D G G+QV
Sbjct: 287 EAAWTSLITSCHRESLLSEAVDVFRDMASSGVPRSSFSLSSILAVFAESQDPGCCCGQQV 346
Query: 1070 HAIAIKLGASSDKFVCSSLVDMYMKHELPIEGQRAFDSMDGLRDYVCWNALLIGYAQRGY 1249
HA AIK G +++FV S L+ MY K + RAF+++ G D CW+AL + YA+ G
Sbjct: 347 HADAIKRGVDTNQFVGSGLIHMYAKQGQLADATRAFETIGGKPDAACWSALAMAYARGGR 406
Query: 1250 VVDAAKLLNKMKANGIEPQESTVNHFLMA 1336
+A +++ +MKA G+ P + + +A
Sbjct: 407 YREATRIMYQMKAAGMNPSKEMADAVRLA 435
>ref|XP_004955884.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18520-like
[Setaria italica]
Length = 444
Score = 192 bits (487), Expect = 5e-46
Identities = 147/455 (32%), Positives = 221/455 (48%), Gaps = 21/455 (4%)
Frame = +2
Query: 35 FCNGGSPLVVR----LPATRWSPTSRKSLSRPTAQESFQLISLRRPRQPPTGNQP-IPLP 199
FC +P + R L A SP S S R A L +P PP ++P +P+P
Sbjct: 10 FCATATPRLSRRRRHLSANATSPASSTSKPRFPA-----LNKPAKPPPPPLLSRPKLPVP 64
Query: 200 DNPSSQKKVFEICNXXXXXXXXXXXXXXXX---VLMLMDALRLPVEEDLYLSLIKECAES 370
+ ++ + C VL LMDAL LP +ED+Y+SL+++CA S
Sbjct: 65 NLTTTDTADDKDCTKKPPPESAAAPPSSSGAGDVLRLMDALGLPPDEDVYISLLRDCASS 124
Query: 371 KNASHGAALYSHVRRTCXXXXXXXXXXXXX-NRFLQLFAAYGCSSAVLRLFDQMPLRDAT 547
AA+++H+ R C NR L +AA G A R+FD+MP R++
Sbjct: 125 AEV---AAVHAHLARRCACAPAGGGLPLPLSNRVLLSYAACGDIGAARRVFDEMPARNSM 181
Query: 548 SFAVVISSLSADGSHRQALHVFV----EMHMRTGDRCLPVLEPRVCWLAALGVILRSCVH 715
++A ++S+ S H A+ +F E TGD + A +LRSC
Sbjct: 182 AWATMVSAYSDARFHHDAMRLFALMCHEARDLTGDG----------FAHATVAVLRSCTR 231
Query: 716 AGELYFGLQLHGLVIKVLGSCEGAVFGDLEDSLLQFYSKF-----QHQENAMSVFKRAIS 880
AGEL G Q+ LV+K EG V GD+ +L+Q Y + + ++ + +R
Sbjct: 232 AGELRLGEQVQALVVK-----EGRVCGDIGSALVQLYCESGSLHRRARQVLAMMMERHCH 286
Query: 881 VSRSAGSWTSMITGYYRQGQFKEAIYLFREMGRAGKKRNFYILSSTLPACAKMRDA---G 1051
+ +WTS+IT +R G EA +FR+M AG R+ + LSS L A+ + G
Sbjct: 287 ETVPEAAWTSLITACHRDGLLDEATDVFRDMASAGVPRSSFSLSSILAVFAESENQQHQG 346
Query: 1052 WSGKQVHAIAIKLGASSDKFVCSSLVDMYMKHELPIEGQRAFDSMDGLRDYVCWNALLIG 1231
G+QVHA IK G +++FV S LV MY K + RAF+++ G D VCWNA+ +
Sbjct: 347 CCGEQVHADTIKRGVDTNQFVGSGLVHMYAKQGRLADAARAFEAIGGRPDAVCWNAMAMA 406
Query: 1232 YAQRGYVVDAAKLLNKMKANGIEPQESTVNHFLMA 1336
YA+ G AA+++ +MKA G+ P E + +A
Sbjct: 407 YARGGRYKQAARVMYQMKAAGMNPSEEMTDAVRLA 441
>ref|XP_003631528.1| PREDICTED: pentatricopeptide repeat-containing protein At1g31790-like
[Vitis vinifera]
Length = 414
Score = 190 bits (483), Expect = 1e-45
Identities = 121/353 (34%), Positives = 191/353 (54%), Gaps = 4/353 (1%)
Frame = +2
Query: 290 VLMLMDALRLPVEEDLYLSLIKECAESKNASHGAALYSHVRRTCXXXXXXXXXXXXXNRF 469
+L LMD L LP+ D+Y SLIKE + + +A+ L +H+ R+ NR
Sbjct: 64 ILRLMDGLGLPIPPDIYASLIKESSTTGDATQATQLLAHINRS-----GLPLSSALLNRI 118
Query: 470 LQLFAAYGCSSAVLRLFDQMPL--RDATSFAVVISSLSADGSHRQALHVFVEMHMRTGDR 643
L ++ + G +FD+M + +++ S+A+++++ +G + +A+ +FV+M
Sbjct: 119 LLMYVSCGLIHTARHMFDKMNVLNKNSISWAIMLAAYMDNGFYEEAIFLFVQMMELHSTI 178
Query: 644 CLPVLEPRVCWLAALGVILRSCVHAGELYFGLQLHGLVIKVLGSCEGAVFGDLEDSLLQF 823
L + W+ +L++CVH L G Q+HG ++KV G L L+ F
Sbjct: 179 MLEL----PAWIFIC--VLKACVHTMNLTLGKQVHGWLLKV-GYATNLF---LSCYLISF 228
Query: 824 YSKFQHQENAMSVFKRAISVSRSAGSWTSMITGYYRQGQFKEAIYLFREMGRAGKKRNFY 1003
Y KF+ ++A VF + + R+ WT+ + + EA+ F EMGRAG KRN +
Sbjct: 229 YGKFRCLDDADFVFDQ--TSERNTVIWTAKMVNKCQGEYMHEALVAFTEMGRAGVKRNEF 286
Query: 1004 ILSSTLPACAKMRDAGWSGKQVHAIAIKLGASSDKFVCSSLVDMYMKHELPIEGQRAFDS 1183
SS L AC +M+D G G+ +HA IKLG SD +V LVDMY K L +E +R F++
Sbjct: 287 TYSSVLRACGRMKDHGRCGRLIHASTIKLGLESDIYVQCGLVDMYGKCGLLVEARRVFET 346
Query: 1184 MDGLR--DYVCWNALLIGYAQRGYVVDAAKLLNKMKANGIEPQESTVNHFLMA 1336
+ + VCWNA+L GY + G ++A K L +MKA GI+PQES +N +A
Sbjct: 347 VSDTNKTNIVCWNAMLTGYIRHGLYIEAIKFLYQMKAAGIQPQESLLNELRIA 399
>ref|XP_004512307.1| PREDICTED: pentatricopeptide repeat-containing protein At1g31790-like
[Cicer arietinum]
Length = 418
Score = 189 bits (479), Expect = 4e-45
Identities = 118/350 (33%), Positives = 189/350 (54%), Gaps = 1/350 (0%)
Frame = +2
Query: 290 VLMLMDALRLPVEEDLYLSLIKECAESKNASHGAALYSHVRRTCXXXXXXXXXXXXXNRF 469
+L LMDAL P+ D+Y SL+KEC S + L+SH+ R+ NR
Sbjct: 77 ILPLMDALHFPIPIDIYTSLVKECTLSGDPETATELHSHITRS-----GIGPPLTLLNRI 131
Query: 470 LQLFAAYGCSSAVLRLFDQMPLRDATSFAVVISSLSADGSHRQALHVFVEMHMRTGDRCL 649
L +F + G + +FD+MP+R+ S+A++ + + + A+ VF+ M + G
Sbjct: 132 LIMFVSCGLLQSARHVFDEMPVRNFHSWAILFVAYYENSDYENAIDVFMRMLRQLGVMEF 191
Query: 650 PVLEPRVCWLAALGVILRSCVHAGELYFGLQLHGLVIKVLGSCEGAVFGDLEDSLLQFYS 829
P L W + +L +C + G+Q+HG + K LG+C+ + + SL++FY
Sbjct: 192 PFLP----WFWSC--LLTACACTVNVPLGMQVHGSLTK-LGACDHVL---ISSSLIRFYG 241
Query: 830 KFQHQENAMSVFKRAISVSR-SAGSWTSMITGYYRQGQFKEAIYLFREMGRAGKKRNFYI 1006
+F+ E+A VF R VSR + +WT+ I R+ F + + F+EMGR G K++ +
Sbjct: 242 RFKCLEDANVVFNR---VSRHNTLTWTAKIVSGCRERHFTQVLGDFKEMGRVGIKKDSFT 298
Query: 1007 LSSTLPACAKMRDAGWSGKQVHAIAIKLGASSDKFVCSSLVDMYMKHELPIEGQRAFDSM 1186
SS L AC +M++ G G+QVHA +IKLG SD +V SL+ MY + L + + F++
Sbjct: 299 FSSVLKACGRMQNYGSCGEQVHADSIKLGLDSDNYVQCSLIAMYGRSGLLRDAKLVFETT 358
Query: 1187 DGLRDYVCWNALLIGYAQRGYVVDAAKLLNKMKANGIEPQESTVNHFLMA 1336
R+ WNA+L+GY Q G + A K + +MKA G+ P ES + +A
Sbjct: 359 LNERNVDSWNAMLMGYIQNGLYIKAVKFVYQMKAAGVHPHESLLEKLRIA 408
>gb|ESW30051.1| hypothetical protein PHAVU_002G120500g [Phaseolus vulgaris]
Length = 420
Score = 186 bits (472), Expect = 3e-44
Identities = 125/360 (34%), Positives = 187/360 (51%), Gaps = 1/360 (0%)
Frame = +2
Query: 290 VLMLMDALRLPVEEDLYLSLIKECAESKNASHGAALYSHVRRTCXXXXXXXXXXXXXNRF 469
+L LMDAL P+ D+Y SLIKEC S + LY+H+ ++ NR
Sbjct: 81 ILHLMDALPFPITIDIYTSLIKECTVSGDPETAIELYTHISKS-----DIKPPLPFLNRI 135
Query: 470 LQLFAAYGCSSAVLRLFDQMPLRDATSFAVVISSLSADGSHRQALHVFVEMHMRTGDRCL 649
L +F + G +F++M +RD S+A + + + + +A VFV M + G
Sbjct: 136 LIMFVSCGMLENARHMFEKMRVRDFNSWATLFVAYYDNAEYEEATAVFVNMLGQLGMLQF 195
Query: 650 PVLEPRVCWLAALGVILRSCVHAGELYFGLQLHGLVIKVLGSCEGAVFGDLEDSLLQFYS 829
P W+ A +LR+C + GLQ+HG ++K LG+C+ + L SL+ FY
Sbjct: 196 PP------WIWAC--LLRACACTLNVPLGLQVHGWLLK-LGACDHVL---LSSSLINFYG 243
Query: 830 KFQHQENAMSVFKRAISVSR-SAGSWTSMITGYYRQGQFKEAIYLFREMGRAGKKRNFYI 1006
+F E+A +VF VSR + +WT+ I R+ F E FREMG G K++ +
Sbjct: 244 RFTCLEDASAVFN---GVSRHNTLTWTAKIVSGCRERHFSEVFGDFREMGMRGVKKDCFT 300
Query: 1007 LSSTLPACAKMRDAGWSGKQVHAIAIKLGASSDKFVCSSLVDMYMKHELPIEGQRAFDSM 1186
SS L AC KM + G+QVHA AIKLG SD +V SL+ MY + L + + F+
Sbjct: 301 FSSVLKACGKMLNQERCGEQVHADAIKLGLISDHYVQCSLIAMYGRCGLLTDAKDVFEMT 360
Query: 1187 DGLRDYVCWNALLIGYAQRGYVVDAAKLLNKMKANGIEPQESTVNHFLMAFNGAL*WNMD 1366
R CWNA+L+GY Q G+ ++A K L +M+A G++P ES + +A NM+
Sbjct: 361 REERKVDCWNAMLMGYTQNGFHIEAVKFLYQMQAAGMQPWESLLKKLRIACGSITYSNMN 420
>ref|XP_003612457.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513792|gb|AES95415.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 418
Score = 184 bits (466), Expect = 1e-43
Identities = 132/427 (30%), Positives = 204/427 (47%), Gaps = 5/427 (1%)
Frame = +2
Query: 71 PATRWSPTSRKSLSRPTAQESFQLISLRRPRQPPTGN----QPIPLPDNPSSQKKVFEIC 238
P TR S + P + L+ L R P N P P P + K C
Sbjct: 12 PPTRRRNADTTSTTSPPSNHQPHLLRLPLRRNPKPKNLSLIHPSSQPITPPKKSKRRRKC 71
Query: 239 NXXXXXXXXXXXXXXXXVLMLMDALRLPVEEDLYLSLIKECAESKNASHGAALYSHVRRT 418
+ +L LMDAL P+ D+Y SL+KEC S + L++ +
Sbjct: 72 DTTSH------------ILPLMDALHFPITIDIYTSLVKECTLSTDPETAIELHTQI--- 116
Query: 419 CXXXXXXXXXXXXXNRFLQLFAAYGCSSAVLRLFDQMPLRDATSFAVVISSLSADGSHRQ 598
NR L +F + G R+FD M +RD S+A + S +G +
Sbjct: 117 --ITRGIELPLTLLNRILIMFVSCGLLENARRVFDVMSVRDFHSWATLFVSYYENGEYEN 174
Query: 599 ALHVFVEMHMRTGDRCLPVLEPRVCWLAALGVILRSCVHAGELYFGLQLHGLVIKVLGSC 778
A+ VFV M + + P W +L++C + G+Q+HG ++K LG+C
Sbjct: 175 AIDVFVSMLCQLD--VMGFSFPPWIW----SCLLKACACTMNVPLGMQVHGCLLK-LGAC 227
Query: 779 EGAVFGDLEDSLLQFYSKFQHQENAMSVFKRAISVSR-SAGSWTSMITGYYRQGQFKEAI 955
+ + + SL++FY +F+ E+A VF R VSR + +WT+ I R+ F EA+
Sbjct: 228 DHVL---ISSSLIRFYGRFKCLEDANMVFNR---VSRHNTLTWTAKIVSSCRERHFSEAL 281
Query: 956 YLFREMGRAGKKRNFYILSSTLPACAKMRDAGWSGKQVHAIAIKLGASSDKFVCSSLVDM 1135
F++MGR G K++ + SS L AC +M++ G G+QVHA AIKLG SD +V SL+ M
Sbjct: 282 GDFKKMGRVGVKKDSFTFSSVLKACGRMQNRGSCGEQVHADAIKLGLDSDSYVQCSLIAM 341
Query: 1136 YMKHELPIEGQRAFDSMDGLRDYVCWNALLIGYAQRGYVVDAAKLLNKMKANGIEPQEST 1315
Y + L + + F+ R+ NA+L+GY Q G ++A K + +MKA G++P E
Sbjct: 342 YGRSGLLRDAELVFEMTRNERNVDSLNAMLMGYIQNGLYIEAVKFVYQMKAAGVQPHEPL 401
Query: 1316 VNHFLMA 1336
+ +A
Sbjct: 402 LEKLRIA 408
>ref|XP_006303657.1| hypothetical protein CARUB_v10011695mg [Capsella rubella]
gi|482572368|gb|EOA36555.1| hypothetical protein
CARUB_v10011695mg [Capsella rubella]
Length = 411
Score = 182 bits (463), Expect = 3e-43
Identities = 120/353 (33%), Positives = 182/353 (51%), Gaps = 7/353 (1%)
Frame = +2
Query: 290 VLMLMDALRLPVEEDLYLSLIKECAESKNASHGAALYSHVRRTCXXXXXXXXXXXXXNRF 469
+L LMD L LP EDLY L KE A + L H+ ++ NR
Sbjct: 76 ILRLMDTLSLPGNEDLYSCLAKESARENDRRGAYELQVHIMKSSIRPSTTFV-----NRL 130
Query: 470 LQLFAAYGCSSAVLRLFDQMPLRDATSFAVVISSLSADGSHRQALHVFVEM--HMRTGDR 643
L + + G +FD+MP RD S+A+V G + A +FV M H + G
Sbjct: 131 LLMHVSCGRLDITRNMFDKMPHRDFHSWAIVFLGCIEMGDYEDAALLFVAMLKHSKNGGA 190
Query: 644 C-LPVLEPRVCWLAALGVILRSCVHAGELYFGLQLHGLVIKV--LGSCEGAVFGDLEDSL 814
+P W+ +G +L++C +L G Q+HGL K+ +G + + G SL
Sbjct: 191 FKIP------SWI--MGCVLKACAMIRDLALGKQVHGLCQKLGFIGEEDSYLLG----SL 238
Query: 815 LQFYSKFQHQENAMSVFKRAISVSRSAGSWTSMITGYYRQGQFKEAIYLFREMGRAGKKR 994
++FY +F+ E+A V + + + W + +T YR+G+F+E I F EMG+ G K+
Sbjct: 239 IRFYGEFRCLEDANLVLHQLSNANTVV--WAAKVTNDYREGEFQEVIRDFIEMGKLGVKK 296
Query: 995 NFYILSSTLPACAKMRDAGWSGKQVHAIAIKLGASSDKFVCSSLVDMYMKHELPIEGQRA 1174
N ++S+ L AC + D G SG+QVHA AIKLG SD + L++MY K+E + ++
Sbjct: 297 NVSVVSNVLKACTWVSDGGRSGQQVHANAIKLGFESDCLIRCQLIEMYGKYEKVKDAEKV 356
Query: 1175 FDSMDGLRDYVCWNALLIGYAQRGYVVDAAKLLNKMKANGIEPQESTVN--HF 1327
F S CWNA++ GY Q G+ ++A KLL +MKA GI+ + +N HF
Sbjct: 357 FKSRKDETSVSCWNAMVAGYMQNGFYIEAIKLLYQMKATGIKADDMLLNEAHF 409
>ref|XP_003516509.1| PREDICTED: pentatricopeptide repeat-containing protein At1g31790-like
[Glycine max]
Length = 423
Score = 182 bits (463), Expect = 3e-43
Identities = 134/414 (32%), Positives = 201/414 (48%), Gaps = 2/414 (0%)
Frame = +2
Query: 101 KSLSRPTAQESFQLISLRRP-RQPPTGNQPIPLPDNPSSQKKVFEICNXXXXXXXXXXXX 277
++L P Q F+L LR P P P PL + KK
Sbjct: 30 RTLPSPNHQLEFRL-PLRHPIHNFPNHTSPQPLTQTTTFTKK---------KKKKKRKGA 79
Query: 278 XXXXVLMLMDALRLPVEEDLYLSLIKECAESKNASHGAALYSHVRRTCXXXXXXXXXXXX 457
+L LM+AL PV D+Y SLIKEC S + L +H+ ++
Sbjct: 80 TTSDILHLMEALPFPVPIDIYTSLIKECTVSGDPETAIELATHISKS-----GIKPPLPF 134
Query: 458 XNRFLQLFAAYGCSSAVLRLFDQMPLRDATSFAVVISSLSADGSHRQALHVFVEMHMRTG 637
NR L +F + G +FD+M +RD ++A + + + + +A +VFV M + G
Sbjct: 135 LNRILVMFVSCGLLENARHMFDKMRVRDFNTWATLFVAYYDNTDYEEATNVFVNMLTQLG 194
Query: 638 DRCLPVLEPRVCWLAALGVILRSCVHAGELYFGLQLHGLVIKVLGSCEGAVFGDLEDSLL 817
P W+ A +LR+C + G+Q+HG ++K LG+C+ + L SL+
Sbjct: 195 MMEFPP------WIWAC--LLRACACTVNVPLGMQVHGWLLK-LGTCDHVL---LSSSLI 242
Query: 818 QFYSKFQHQENAMSVFKRAISVSR-SAGSWTSMITGYYRQGQFKEAIYLFREMGRAGKKR 994
FY +F E+A VF VSR + +WT+ I R+ F E F+EMG G K+
Sbjct: 243 NFYGRFTCLEDASVVFD---GVSRHNTLTWTAKIVSGCRERHFSEVFDDFKEMGMRGVKK 299
Query: 995 NFYILSSTLPACAKMRDAGWSGKQVHAIAIKLGASSDKFVCSSLVDMYMKHELPIEGQRA 1174
+ + SS L AC +M + G+QVH AIKLG SD +V SL+ MY + L + +R
Sbjct: 300 DCFTFSSVLKACGRMLNQERCGEQVHVDAIKLGLVSDHYVQCSLIAMYGRCGLLEDAKRV 359
Query: 1175 FDSMDGLRDYVCWNALLIGYAQRGYVVDAAKLLNKMKANGIEPQESTVNHFLMA 1336
F+ R CWNA+L+GY Q G ++A K L +M+A G++P+ES + MA
Sbjct: 360 FEMSQEERKVDCWNAMLMGYIQNGLYIEAVKFLYQMQAAGMQPRESLLKKLRMA 413
>ref|XP_002893686.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297339528|gb|EFH69945.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 410
Score = 181 bits (458), Expect = 1e-42
Identities = 119/350 (34%), Positives = 178/350 (50%), Gaps = 4/350 (1%)
Frame = +2
Query: 290 VLMLMDALRLPVEEDLYLSLIKECAESKNASHGAALYSHVRRTCXXXXXXXXXXXXXNRF 469
+L LMD+L LP EDLY L KE A + L H+ ++ NR
Sbjct: 75 ILRLMDSLSLPGNEDLYSCLAKESARENDRRGAYELQVHIMKSSIRRPTTTFV----NRL 130
Query: 470 LQLFAAYGCSSAVLRLFDQMPLRDATSFAVVISSLSADGSHRQALHVFVEM--HMRTGDR 643
L + + G +FD+MP RD S+A+V G + A +FV M H + G
Sbjct: 131 LLMHVSCGRLDITRHMFDKMPHRDFHSWAIVFLGCIEMGDYEDAALLFVSMLKHSQNGAF 190
Query: 644 CLPVLEPRVCWLAALGVILRSCVHAGELYFGLQLHGLVIKVLGSCEGAVFGDLEDSLLQF 823
+P W+ +G +L++C + G Q+H L K+ C L SL++F
Sbjct: 191 KIP------SWI--MGCVLKACAMIRDFELGKQVHALCHKL--GCIDEEDSYLSGSLIRF 240
Query: 824 YSKFQHQENAMSVFKRAISVSRSAGSWTSMITGYYRQGQFKEAIYLFREMGRAGKKRNFY 1003
Y +F+ E+A V + + + A W + +T YR+G+F+E I F EMG ++N
Sbjct: 241 YGEFRCLEDANLVLHQLSNANTVA--WAAKVTNDYREGEFQEVIRDFIEMGNHRIRKNVS 298
Query: 1004 ILSSTLPACAKMRDAGWSGKQVHAIAIKLGASSDKFVCSSLVDMYMKHELPIEGQRAFDS 1183
+ S+ L AC + D G SGKQVHA+AIKLG SD + L++MY K+ + ++ F S
Sbjct: 299 VFSNVLKACTWVSDGGRSGKQVHAVAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKS 358
Query: 1184 MDGLRDYVCWNALLIGYAQRGYVVDAAKLLNKMKANGIEPQESTVN--HF 1327
+ CWNA++ GY Q G V+A KLL +MKA GI+ Q++ +N HF
Sbjct: 359 SKDETNVNCWNAMVAGYMQNGIYVEAIKLLCQMKATGIKAQDTLLNEAHF 408
>ref|NP_174459.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169166|sp|Q9C6R9.1|PPR66_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g31790 gi|12321298|gb|AAG50719.1|AC079041_12
hypothetical protein [Arabidopsis thaliana]
gi|111074348|gb|ABH04547.1| At1g31790 [Arabidopsis
thaliana] gi|332193272|gb|AEE31393.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 409
Score = 178 bits (452), Expect = 5e-42
Identities = 133/430 (30%), Positives = 202/430 (46%), Gaps = 12/430 (2%)
Frame = +2
Query: 68 LPATRWSPTSRKSLSRPTAQESFQLISLRRPRQPPTG-----NQPIPLPDNPSSQKKVFE 232
+P+ ++ T+R + QL LR+P+ + QP P NPSS+ +
Sbjct: 16 VPSFNYNSTARSVGNDVRTNFDVQLF-LRKPKHQKSEPVVVIQQPQIQPQNPSSRCSTSD 74
Query: 233 ICNXXXXXXXXXXXXXXXXVLMLMDALRLPVEEDLYLSLIKECAESKNASHGAALYSHVR 412
I L LMD+L LP ED+Y L KE A + L H+
Sbjct: 75 I-------------------LRLMDSLSLPGNEDIYSCLAKESARENDQRGAHELQVHIM 115
Query: 413 RTCXXXXXXXXXXXXXNRFLQLFAAYGCSSAVLRLFDQMPLRDATSFAVVISSLSADGSH 592
++ NR L + + G ++FD+MP RD S+A+V G +
Sbjct: 116 KSSIRPTITFI-----NRLLLMHVSCGRLDITRQMFDRMPHRDFHSWAIVFLGCIEMGDY 170
Query: 593 RQALHVFVEM--HMRTGDRCLPVLEPRVCWLAALGVILRSCVHAGELYFGLQLHGLVIKV 766
A +FV M H + G +P W+ LG +L++C + G Q+H L
Sbjct: 171 EDAAFLFVSMLKHSQKGAFKIP------SWI--LGCVLKACAMIRDFELGKQVHAL---- 218
Query: 767 LGSCEGAVFGDLEDS-----LLQFYSKFQHQENAMSVFKRAISVSRSAGSWTSMITGYYR 931
C F D EDS L++FY +F+ E+A V + + + A W + +T YR
Sbjct: 219 ---CHKLGFIDEEDSYLSGSLIRFYGEFRCLEDANLVLHQLSNANTVA--WAAKVTNDYR 273
Query: 932 QGQFKEAIYLFREMGRAGKKRNFYILSSTLPACAKMRDAGWSGKQVHAIAIKLGASSDKF 1111
+G+F+E I F EMG G K+N + S+ L AC+ + D G SG+QVHA AIKLG SD
Sbjct: 274 EGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACSWVSDGGRSGQQVHANAIKLGFESDCL 333
Query: 1112 VCSSLVDMYMKHELPIEGQRAFDSMDGLRDYVCWNALLIGYAQRGYVVDAAKLLNKMKAN 1291
+ L++MY K+ + ++ F S CWNA++ Y Q G ++A KLL +MKA
Sbjct: 334 IRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCWNAMVASYMQNGIYIEAIKLLYQMKAT 393
Query: 1292 GIEPQESTVN 1321
GI+ ++ +N
Sbjct: 394 GIKAHDTLLN 403
>ref|XP_002519945.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223540991|gb|EEF42549.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 403
Score = 176 bits (446), Expect = 3e-41
Identities = 114/352 (32%), Positives = 185/352 (52%), Gaps = 3/352 (0%)
Frame = +2
Query: 290 VLMLMDALRLPVEEDLYLSLIKECAESKNASHGAALYSHVRRTCXXXXXXXXXXXXXNRF 469
++ LMD+L P+ D+Y SLIKEC + +++ L+SH+ +R
Sbjct: 60 IMRLMDSLCHPIPPDIYTSLIKECTLTSDSTEALCLHSHL----ISQTNLKLTPPLVHRL 115
Query: 470 LQLFAAYGCSSAVLRLFDQMPLR-DATSFAVVISSLSADGSHRQALHVFVEMHMRTG--D 640
L + + G LFD+MPL+ D S+ +VI ++ + +++F++M ++ D
Sbjct: 116 LLMHVSCGQLDIARNLFDKMPLKKDFISWVIVIVGCFSNSKYEAGINLFIDMLLQHSVYD 175
Query: 641 RCLPVLEPRVCWLAALGVILRSCVHAGELYFGLQLHGLVIKVLGSCEGAVFGDLEDSLLQ 820
+ L W + I++ C+++ + G Q+HG++ KV + E + SL+
Sbjct: 176 GLMFDLNT---WNIIILCIIKCCIYSMNISLGKQVHGILFKVGLTSEIS----FNVSLMD 228
Query: 821 FYSKFQHQENAMSVFKRAISVSRSAGSWTSMITGYYRQGQFKEAIYLFREMGRAGKKRNF 1000
FY K E+ SVF + + + +WT+ I R +F E I F+EMG AG KRN
Sbjct: 229 FYGKLGCLEDVNSVFNKLDN--HNTATWTAKIVNSCRNQRFYEVIEDFKEMGEAGIKRNS 286
Query: 1001 YILSSTLPACAKMRDAGWSGKQVHAIAIKLGASSDKFVCSSLVDMYMKHELPIEGQRAFD 1180
+ +SS L ACA+M D G GKQVH I IKLG SD FV L+ MY K + + ++ F+
Sbjct: 287 FTVSSVLRACARMGDGGNCGKQVHVIVIKLGLESDAFVQCGLIAMYGKCGMIRKAKKVFE 346
Query: 1181 SMDGLRDYVCWNALLIGYAQRGYVVDAAKLLNKMKANGIEPQESTVNHFLMA 1336
+ + CWNALL+ Y + ++A KLL +M+A I+ ES ++H +A
Sbjct: 347 LVIDKTNTACWNALLMAYVRNELFIEAMKLLYQMEAAKIQVNESLLDHVRIA 398