BLASTX nr result

ID: Zingiber25_contig00029611 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00029611
         (300 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006828877.1| hypothetical protein AMTR_s00001p00177580 [A...   134   1e-29
ref|XP_004145526.1| PREDICTED: high mobility group B protein 9-l...   120   2e-25
gb|ADN34129.1| high mobility group family [Cucumis melo subsp. m...   120   2e-25
ref|XP_002307758.1| hypothetical protein POPTR_0005s26800g [Popu...   120   2e-25
gb|ABK95398.1| unknown [Populus trichocarpa]                          120   2e-25
ref|XP_004292927.1| PREDICTED: high mobility group B protein 9-l...   119   4e-25
gb|EXB88223.1| High mobility group B protein 9 [Morus notabilis]      118   7e-25
gb|EOY15159.1| High mobility group family isoform 2 [Theobroma c...   118   7e-25
gb|EOY15158.1| High mobility group family isoform 1 [Theobroma c...   118   7e-25
ref|XP_002510615.1| transcription factor, putative [Ricinus comm...   118   7e-25
ref|XP_006473735.1| PREDICTED: high mobility group B protein 9-l...   118   9e-25
ref|XP_006435276.1| hypothetical protein CICLE_v10001816mg [Citr...   118   9e-25
ref|XP_006300534.1| hypothetical protein CARUB_v10020597mg [Caps...   118   9e-25
ref|NP_177738.1| high mobility group B protein 9 [Arabidopsis th...   118   9e-25
gb|ADE77776.1| unknown [Picea sitchensis]                             118   9e-25
ref|XP_006390237.1| hypothetical protein EUTSA_v10018826mg [Eutr...   117   1e-24
ref|XP_002889059.1| high mobility group family protein [Arabidop...   117   1e-24
gb|EPS62946.1| high mobility group family, partial [Genlisea aurea]   116   4e-24
gb|EMJ24408.1| hypothetical protein PRUPE_ppa009338mg [Prunus pe...   115   8e-24
ref|XP_004253204.1| PREDICTED: high mobility group B protein 9-l...   115   8e-24

>ref|XP_006828877.1| hypothetical protein AMTR_s00001p00177580 [Amborella trichopoda]
           gi|548833856|gb|ERM96293.1| hypothetical protein
           AMTR_s00001p00177580 [Amborella trichopoda]
          Length = 367

 Score =  134 bits (338), Expect = 1e-29
 Identities = 60/70 (85%), Positives = 65/70 (92%)
 Frame = -1

Query: 210 DPAHPKPNRSAYNFFFAEKHSKLKALYPHREREFSKMIGESWSKLSEEERTVYQDCGSKD 31
           DP HPKPNRSAYNFFF EKH+KLK LYPHREREFSKMIGESW+KL+EEER VYQDCG +D
Sbjct: 247 DPGHPKPNRSAYNFFFKEKHAKLKLLYPHREREFSKMIGESWNKLTEEERLVYQDCGLQD 306

Query: 30  KERYKREMQE 1
           KERY+REMQE
Sbjct: 307 KERYRREMQE 316


>ref|XP_004145526.1| PREDICTED: high mobility group B protein 9-like [Cucumis sativus]
           gi|449519744|ref|XP_004166894.1| PREDICTED: high
           mobility group B protein 9-like [Cucumis sativus]
          Length = 324

 Score =  120 bits (300), Expect = 2e-25
 Identities = 54/70 (77%), Positives = 62/70 (88%)
 Frame = -1

Query: 210 DPAHPKPNRSAYNFFFAEKHSKLKALYPHREREFSKMIGESWSKLSEEERTVYQDCGSKD 31
           DP HPKPNRS YNFFFAEKH KLK+LYP+REREF+KMIGESW+ LS EER VYQ+ G KD
Sbjct: 234 DPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKD 293

Query: 30  KERYKREMQE 1
           KERY+RE++E
Sbjct: 294 KERYRRELKE 303


>gb|ADN34129.1| high mobility group family [Cucumis melo subsp. melo]
          Length = 324

 Score =  120 bits (300), Expect = 2e-25
 Identities = 54/70 (77%), Positives = 62/70 (88%)
 Frame = -1

Query: 210 DPAHPKPNRSAYNFFFAEKHSKLKALYPHREREFSKMIGESWSKLSEEERTVYQDCGSKD 31
           DP HPKPNRS YNFFFAEKH KLK+LYP+REREF+KMIGESW+ LS EER VYQ+ G KD
Sbjct: 234 DPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKD 293

Query: 30  KERYKREMQE 1
           KERY+RE++E
Sbjct: 294 KERYRRELKE 303


>ref|XP_002307758.1| hypothetical protein POPTR_0005s26800g [Populus trichocarpa]
           gi|222857207|gb|EEE94754.1| hypothetical protein
           POPTR_0005s26800g [Populus trichocarpa]
          Length = 329

 Score =  120 bits (300), Expect = 2e-25
 Identities = 54/70 (77%), Positives = 63/70 (90%)
 Frame = -1

Query: 210 DPAHPKPNRSAYNFFFAEKHSKLKALYPHREREFSKMIGESWSKLSEEERTVYQDCGSKD 31
           DP++PKPNRS YNFFFAEKH KLK+LYP+REREF+KMIG+SWS LS EER VYQ+ G KD
Sbjct: 236 DPSYPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGQSWSSLSAEERMVYQNIGLKD 295

Query: 30  KERYKREMQE 1
           KERYKRE++E
Sbjct: 296 KERYKRELKE 305


>gb|ABK95398.1| unknown [Populus trichocarpa]
          Length = 317

 Score =  120 bits (300), Expect = 2e-25
 Identities = 54/70 (77%), Positives = 63/70 (90%)
 Frame = -1

Query: 210 DPAHPKPNRSAYNFFFAEKHSKLKALYPHREREFSKMIGESWSKLSEEERTVYQDCGSKD 31
           DP++PKPNRS YNFFFAEKH KLK+LYP+REREF+KMIG+SWS LS EER VYQ+ G KD
Sbjct: 224 DPSYPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGQSWSSLSAEERMVYQNIGLKD 283

Query: 30  KERYKREMQE 1
           KERYKRE++E
Sbjct: 284 KERYKRELKE 293


>ref|XP_004292927.1| PREDICTED: high mobility group B protein 9-like [Fragaria vesca
           subsp. vesca]
          Length = 346

 Score =  119 bits (298), Expect = 4e-25
 Identities = 53/70 (75%), Positives = 61/70 (87%)
 Frame = -1

Query: 210 DPAHPKPNRSAYNFFFAEKHSKLKALYPHREREFSKMIGESWSKLSEEERTVYQDCGSKD 31
           DP HPKPNRS YNFFFAEKH K K+LYP+REREF+KMIGESW+ L+ EER VYQ+ G KD
Sbjct: 249 DPNHPKPNRSGYNFFFAEKHCKFKSLYPNREREFTKMIGESWTNLTAEERMVYQNIGVKD 308

Query: 30  KERYKREMQE 1
           KERYKRE++E
Sbjct: 309 KERYKRELEE 318


>gb|EXB88223.1| High mobility group B protein 9 [Morus notabilis]
          Length = 277

 Score =  118 bits (296), Expect = 7e-25
 Identities = 54/70 (77%), Positives = 62/70 (88%)
 Frame = -1

Query: 210 DPAHPKPNRSAYNFFFAEKHSKLKALYPHREREFSKMIGESWSKLSEEERTVYQDCGSKD 31
           DP +PKPNRS YNFFFAEKH KLKAL+P+REREF+KMIGESWS LS EER VYQ+ G KD
Sbjct: 190 DPNYPKPNRSGYNFFFAEKHYKLKALFPNREREFTKMIGESWSNLSPEERMVYQNIGLKD 249

Query: 30  KERYKREMQE 1
           KERY+RE++E
Sbjct: 250 KERYRRELKE 259


>gb|EOY15159.1| High mobility group family isoform 2 [Theobroma cacao]
          Length = 330

 Score =  118 bits (296), Expect = 7e-25
 Identities = 53/70 (75%), Positives = 62/70 (88%)
 Frame = -1

Query: 210 DPAHPKPNRSAYNFFFAEKHSKLKALYPHREREFSKMIGESWSKLSEEERTVYQDCGSKD 31
           DP++PKPNRS YNFFFAEKH KLK+LYP+REREF+KMIGESW+ L  EER VYQ+ G KD
Sbjct: 243 DPSYPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNSLGPEERMVYQNIGLKD 302

Query: 30  KERYKREMQE 1
           KERYKRE++E
Sbjct: 303 KERYKRELKE 312


>gb|EOY15158.1| High mobility group family isoform 1 [Theobroma cacao]
          Length = 336

 Score =  118 bits (296), Expect = 7e-25
 Identities = 53/70 (75%), Positives = 62/70 (88%)
 Frame = -1

Query: 210 DPAHPKPNRSAYNFFFAEKHSKLKALYPHREREFSKMIGESWSKLSEEERTVYQDCGSKD 31
           DP++PKPNRS YNFFFAEKH KLK+LYP+REREF+KMIGESW+ L  EER VYQ+ G KD
Sbjct: 249 DPSYPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNSLGPEERMVYQNIGLKD 308

Query: 30  KERYKREMQE 1
           KERYKRE++E
Sbjct: 309 KERYKRELKE 318


>ref|XP_002510615.1| transcription factor, putative [Ricinus communis]
           gi|223551316|gb|EEF52802.1| transcription factor,
           putative [Ricinus communis]
          Length = 338

 Score =  118 bits (296), Expect = 7e-25
 Identities = 53/70 (75%), Positives = 63/70 (90%)
 Frame = -1

Query: 210 DPAHPKPNRSAYNFFFAEKHSKLKALYPHREREFSKMIGESWSKLSEEERTVYQDCGSKD 31
           DP++PKPNRS YNFFFAEKH KLK+LYP+REREF+K+IG+SWS LS EER VYQ+ G KD
Sbjct: 246 DPSYPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKIIGQSWSNLSAEERMVYQNIGLKD 305

Query: 30  KERYKREMQE 1
           KERYKRE++E
Sbjct: 306 KERYKRELKE 315


>ref|XP_006473735.1| PREDICTED: high mobility group B protein 9-like isoform X2 [Citrus
           sinensis]
          Length = 327

 Score =  118 bits (295), Expect = 9e-25
 Identities = 53/70 (75%), Positives = 62/70 (88%)
 Frame = -1

Query: 210 DPAHPKPNRSAYNFFFAEKHSKLKALYPHREREFSKMIGESWSKLSEEERTVYQDCGSKD 31
           DP++PKPNRS YNFFFAEKH KLK+LYP+REREF+KMIGESW+ LS EER VYQ+ G KD
Sbjct: 243 DPSYPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWTNLSPEERKVYQNIGLKD 302

Query: 30  KERYKREMQE 1
           KERY RE++E
Sbjct: 303 KERYNRELKE 312


>ref|XP_006435276.1| hypothetical protein CICLE_v10001816mg [Citrus clementina]
           gi|568839528|ref|XP_006473734.1| PREDICTED: high
           mobility group B protein 9-like isoform X1 [Citrus
           sinensis] gi|557537398|gb|ESR48516.1| hypothetical
           protein CICLE_v10001816mg [Citrus clementina]
          Length = 328

 Score =  118 bits (295), Expect = 9e-25
 Identities = 53/70 (75%), Positives = 62/70 (88%)
 Frame = -1

Query: 210 DPAHPKPNRSAYNFFFAEKHSKLKALYPHREREFSKMIGESWSKLSEEERTVYQDCGSKD 31
           DP++PKPNRS YNFFFAEKH KLK+LYP+REREF+KMIGESW+ LS EER VYQ+ G KD
Sbjct: 244 DPSYPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWTNLSPEERKVYQNIGLKD 303

Query: 30  KERYKREMQE 1
           KERY RE++E
Sbjct: 304 KERYNRELKE 313


>ref|XP_006300534.1| hypothetical protein CARUB_v10020597mg [Capsella rubella]
           gi|482569244|gb|EOA33432.1| hypothetical protein
           CARUB_v10020597mg [Capsella rubella]
          Length = 342

 Score =  118 bits (295), Expect = 9e-25
 Identities = 53/70 (75%), Positives = 62/70 (88%)
 Frame = -1

Query: 210 DPAHPKPNRSAYNFFFAEKHSKLKALYPHREREFSKMIGESWSKLSEEERTVYQDCGSKD 31
           DP +PKPNRS YNFFFAEKH KLK+LYP++EREF+K+IGESWS LS EERTVYQ+ G KD
Sbjct: 255 DPNYPKPNRSGYNFFFAEKHCKLKSLYPNKEREFTKIIGESWSNLSTEERTVYQNIGLKD 314

Query: 30  KERYKREMQE 1
           KERY+RE+ E
Sbjct: 315 KERYQRELNE 324


>ref|NP_177738.1| high mobility group B protein 9 [Arabidopsis thaliana]
           gi|75265821|sp|Q9SGS2.1|HMGB9_ARATH RecName: Full=High
           mobility group B protein 9; AltName:
           Full=Nucleosome/chromatin assembly factor group D 09;
           Short=Nucleosome/chromatin assembly factor group D 9
           gi|6573729|gb|AAF17649.1|AC009978_25 T23E18.4
           [Arabidopsis thaliana] gi|20466328|gb|AAM20481.1|
           unknown protein [Arabidopsis thaliana]
           gi|31711812|gb|AAP68262.1| At1g76110 [Arabidopsis
           thaliana] gi|332197676|gb|AEE35797.1| high mobility
           group B protein 9 [Arabidopsis thaliana]
          Length = 338

 Score =  118 bits (295), Expect = 9e-25
 Identities = 53/70 (75%), Positives = 61/70 (87%)
 Frame = -1

Query: 210 DPAHPKPNRSAYNFFFAEKHSKLKALYPHREREFSKMIGESWSKLSEEERTVYQDCGSKD 31
           DP +PKPNRS YNFFFAEKH KLK+LYP++EREF+K+IGESWS LS EER VYQD G KD
Sbjct: 251 DPNYPKPNRSGYNFFFAEKHCKLKSLYPNKEREFTKLIGESWSNLSTEERMVYQDIGLKD 310

Query: 30  KERYKREMQE 1
           KERY+RE+ E
Sbjct: 311 KERYQRELNE 320


>gb|ADE77776.1| unknown [Picea sitchensis]
          Length = 351

 Score =  118 bits (295), Expect = 9e-25
 Identities = 53/70 (75%), Positives = 62/70 (88%)
 Frame = -1

Query: 210 DPAHPKPNRSAYNFFFAEKHSKLKALYPHREREFSKMIGESWSKLSEEERTVYQDCGSKD 31
           DP HPKPNRS YNFFFAE+H++LKAL+P ++RE SKMIGE W+KL+EEER VYQD G KD
Sbjct: 206 DPNHPKPNRSGYNFFFAEQHARLKALHPDKDREISKMIGELWNKLNEEERGVYQDFGLKD 265

Query: 30  KERYKREMQE 1
           KERYK+EMQE
Sbjct: 266 KERYKKEMQE 275


>ref|XP_006390237.1| hypothetical protein EUTSA_v10018826mg [Eutrema salsugineum]
           gi|557086671|gb|ESQ27523.1| hypothetical protein
           EUTSA_v10018826mg [Eutrema salsugineum]
          Length = 338

 Score =  117 bits (294), Expect = 1e-24
 Identities = 53/70 (75%), Positives = 61/70 (87%)
 Frame = -1

Query: 210 DPAHPKPNRSAYNFFFAEKHSKLKALYPHREREFSKMIGESWSKLSEEERTVYQDCGSKD 31
           DP +PKPNRS YNFFFAEKH KLK+LYP++EREF+K+IGESWS LS EER VYQD G KD
Sbjct: 251 DPNYPKPNRSGYNFFFAEKHCKLKSLYPNKEREFTKIIGESWSNLSTEERMVYQDIGLKD 310

Query: 30  KERYKREMQE 1
           KERY+RE+ E
Sbjct: 311 KERYQRELNE 320


>ref|XP_002889059.1| high mobility group family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297334900|gb|EFH65318.1| high mobility group
           family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 338

 Score =  117 bits (294), Expect = 1e-24
 Identities = 53/70 (75%), Positives = 61/70 (87%)
 Frame = -1

Query: 210 DPAHPKPNRSAYNFFFAEKHSKLKALYPHREREFSKMIGESWSKLSEEERTVYQDCGSKD 31
           DP +PKPNRS YNFFFAEKH KLK+LYP++EREF+K+IGESWS LS EER VYQD G KD
Sbjct: 251 DPNYPKPNRSGYNFFFAEKHCKLKSLYPNKEREFTKIIGESWSNLSTEERMVYQDIGLKD 310

Query: 30  KERYKREMQE 1
           KERY+RE+ E
Sbjct: 311 KERYQRELNE 320


>gb|EPS62946.1| high mobility group family, partial [Genlisea aurea]
          Length = 278

 Score =  116 bits (290), Expect = 4e-24
 Identities = 52/70 (74%), Positives = 61/70 (87%)
 Frame = -1

Query: 210 DPAHPKPNRSAYNFFFAEKHSKLKALYPHREREFSKMIGESWSKLSEEERTVYQDCGSKD 31
           DP  PKPNRS YNFFF+EKHS LK+LYP+REREF+KMIGESW+ LS EER VYQ+ G KD
Sbjct: 203 DPGRPKPNRSGYNFFFSEKHSTLKSLYPNREREFTKMIGESWNSLSPEERVVYQNYGLKD 262

Query: 30  KERYKREMQE 1
           KERY++EM+E
Sbjct: 263 KERYQKEMKE 272


>gb|EMJ24408.1| hypothetical protein PRUPE_ppa009338mg [Prunus persica]
          Length = 296

 Score =  115 bits (287), Expect = 8e-24
 Identities = 51/70 (72%), Positives = 62/70 (88%)
 Frame = -1

Query: 210 DPAHPKPNRSAYNFFFAEKHSKLKALYPHREREFSKMIGESWSKLSEEERTVYQDCGSKD 31
           DP +PKPNRS YNF+FAEKH KLK+LYP+REREF+KMIGESWS L+ EER VYQ+ G +D
Sbjct: 209 DPNYPKPNRSGYNFYFAEKHYKLKSLYPNREREFTKMIGESWSNLTAEERLVYQNIGLQD 268

Query: 30  KERYKREMQE 1
           KERYK+E++E
Sbjct: 269 KERYKKELKE 278


>ref|XP_004253204.1| PREDICTED: high mobility group B protein 9-like [Solanum
           lycopersicum]
          Length = 285

 Score =  115 bits (287), Expect = 8e-24
 Identities = 51/70 (72%), Positives = 61/70 (87%)
 Frame = -1

Query: 210 DPAHPKPNRSAYNFFFAEKHSKLKALYPHREREFSKMIGESWSKLSEEERTVYQDCGSKD 31
           DP  PKPNRS YNFFFAEKH+ LK+L+PHREREF+KMIGESW+ LS EE+ VYQ+ G KD
Sbjct: 204 DPNRPKPNRSGYNFFFAEKHAMLKSLHPHREREFTKMIGESWNNLSPEEKMVYQEYGVKD 263

Query: 30  KERYKREMQE 1
           KERY+RE++E
Sbjct: 264 KERYQRELKE 273


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