BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00029538
         (1266 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004973867.1| PREDICTED: transcription factor bHLH130-like...   198   3e-48
ref|XP_004957993.1| PREDICTED: transcription factor bHLH130-like...   196   1e-47
ref|NP_001148741.1| DNA binding protein [Zea mays] gi|195621758|...   193   1e-46
tpg|DAA41104.1| TPA: putative HLH DNA-binding domain superfamily...   188   4e-45
ref|NP_001062190.1| Os08g0506700 [Oryza sativa Japonica Group] g...   187   6e-45
ref|XP_003574744.1| PREDICTED: transcription factor bHLH130-like...   187   1e-44
dbj|BAJ85853.1| predicted protein [Hordeum vulgare subsp. vulgare]    185   3e-44
gb|EAZ07555.1| hypothetical protein OsI_29809 [Oryza sativa Indi...   182   2e-43
ref|XP_004957992.1| PREDICTED: transcription factor bHLH130-like...   179   2e-42
ref|XP_002445905.1| hypothetical protein SORBIDRAFT_07g027810 [S...   174   9e-41
tpg|DAA47960.1| TPA: putative HLH DNA-binding domain superfamily...   171   4e-40
ref|NP_001147910.1| DNA binding protein [Zea mays] gi|195614520|...   171   4e-40
tpg|DAA41105.1| TPA: putative HLH DNA-binding domain superfamily...   171   8e-40
gb|EAZ09563.1| hypothetical protein OsI_31842 [Oryza sativa Indi...   165   3e-38
ref|XP_004957991.1| PREDICTED: transcription factor bHLH130-like...   165   4e-38
ref|XP_004957179.1| PREDICTED: transcription factor bHLH130-like...   164   9e-38
dbj|BAK02702.1| predicted protein [Hordeum vulgare subsp. vulgare]    158   5e-36
ref|XP_002304761.1| basic helix-loop-helix family protein [Popul...   158   5e-36
ref|NP_001151233.1| helix-loop-helix DNA-binding domain containi...   158   5e-36
ref|XP_006660262.1| PREDICTED: transcription factor bHLH130-like...   156   2e-35

>ref|XP_004973867.1| PREDICTED: transcription factor bHLH130-like [Setaria italica]
          Length = 371

 Score =  198 bits (504), Expect = 3e-48
 Identities = 152/393 (38%), Positives = 191/393 (48%), Gaps = 31/393 (7%)
 Frame = +2

Query: 17   MYGATAVTSKEDLNLPYRSRDVLSESNSNLLRYQSAPSSLLGELCDDFLPXXXXXXXXXX 196
            MYG+      +DLNLP +       ++S LLRY+SAPS+LLGE+C+DFL           
Sbjct: 1    MYGSPV---SKDLNLPVQP----PMTSSGLLRYRSAPSTLLGEVCEDFLQPGPRAGSPDA 53

Query: 197  XXXXXXP----DLQIEDRTXXXXXXXXXXHGLLPLPPQKQQIAMPMFHPXXXXXXXXXXX 364
                       D QI D+                L  Q+QQ    MFH            
Sbjct: 54   GAADVFSRFLADHQIRDKPHTHFPDTAA------LASQQQQQQQMMFHSQQQQQQMAA-- 105

Query: 365  MANHAYSVAGSSSMRVDTAEQFHKRSNSSHPNLIARQSSSPAGLFSHLHVDNSTGFGYGT 544
            + +  Y    SS M   TA      + +   +LI RQSSSPAG  +HL++DN  G   G 
Sbjct: 106  VESGLYRTV-SSGMEAPTAG-----AGAGGSSLI-RQSSSPAGFLNHLNMDNGYG---GM 155

Query: 545  VRGGLGNEXXXXXXXXXXXXXXXXXXXXXXXEAAA-----------------SGNSPEES 673
            +R G+G                           ++                  G+SPE +
Sbjct: 156  LRAGMGVGFRNGASAAAAADSTAGGRLKGQLSFSSRQGSLMSQISEMGSEELGGSSPEGA 215

Query: 674  GSF-GAFRGNNNYSAWEINSSLQLQN---------GDRNHVSGLSPQFSLPNTSSEMANL 823
            G   G   G    S WE +SSL  ++               SGL+ QFSLP TSSEMA +
Sbjct: 216  GGGRGYIPGYPMSSGWEDSSSLMSESLSGMKRPRDSSEPGQSGLTQQFSLPKTSSEMAAI 275

Query: 824  ERYWEFQDAMPCKVRAKRGCATHPRSIAXXXXXXXXXXXXXKLQELVPNMDKQTNTSDML 1003
            E++ +FQDA+PCK+RAKRGCATHPRSIA             KLQELVPNMDKQTNTSDML
Sbjct: 276  EKFLQFQDAVPCKIRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMDKQTNTSDML 335

Query: 1004 DLAVSYIQDLQKQVKVLSEKGASCSCSAGKQ*Q 1102
            DLAV YI+DLQKQVKVL+E  A+C+CSA K  Q
Sbjct: 336  DLAVDYIKDLQKQVKVLNESRANCTCSASKNPQ 368


>ref|XP_004957993.1| PREDICTED: transcription factor bHLH130-like isoform X5 [Setaria
            italica]
          Length = 381

 Score =  196 bits (499), Expect = 1e-47
 Identities = 151/399 (37%), Positives = 186/399 (46%), Gaps = 37/399 (9%)
 Frame = +2

Query: 17   MYGATAVTSKEDLNLPYRSRDVLSESNSNLLRYQSAPSSLLGELCDDFLPXXXXXXXXXX 196
            MYG+      +DLNLP +       ++S LLRY+SAPS++LGELC+DFLP          
Sbjct: 1    MYGSPV---SKDLNLPVQP----PMASSGLLRYRSAPSTVLGELCEDFLPPGPRAASPDA 53

Query: 197  XXXXXXP----DLQIEDRTXXXXXXXXXXH--GLLPLPPQKQQIAMPMFHPXXXXXXXXX 358
                       D  I D            H  G   +  Q+QQ+     H          
Sbjct: 54   GADNVFARFLADHHIRDDKPSPPPPPPAPHFPGEAGMASQQQQMMFQSQHQQQQEMVDAK 113

Query: 359  XXMANHAYSVAGSSSMRVDTAEQFHKRSNSSHPNLIARQSSSPAGLFSHLHVDNSTGFGY 538
              +    Y    S       A      SN      +ARQSSSPAG   +L++DN    GY
Sbjct: 114  SGL----YRTVSSGMEPASAAAAGVGASN------LARQSSSPAGFLDNLNMDN----GY 159

Query: 539  GTV-RGGL--------------------GNEXXXXXXXXXXXXXXXXXXXXXXXEAAASG 655
            G + R G+                    G                              G
Sbjct: 160  GAMLRAGMSMGFRDGSSAAAATADSLAGGGSRLKGQLSFSSRQGSLMSQISEMDSEEVGG 219

Query: 656  NSPEESGSF-GAFRGNNNYSAWEINSSLQLQN-----GDRNHV----SGLSPQFSLPNTS 805
            +SPE +G   G   G    S WE +SSL  +N       R+ +    +GL  QFSLP TS
Sbjct: 220  SSPEAAGGGRGYIPGYPMGSGWEDSSSLMSENLSGMKRPRDSLEPGQNGLMHQFSLPKTS 279

Query: 806  SEMANLERYWEFQDAMPCKVRAKRGCATHPRSIAXXXXXXXXXXXXXKLQELVPNMDKQT 985
            SEMAN+E++ +FQDA+PCK+RAKRGCATHPRSIA             KLQELVPNMDKQT
Sbjct: 280  SEMANIEKFLQFQDAVPCKIRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMDKQT 339

Query: 986  NTSDMLDLAVSYIQDLQKQVKVLSEKGASCSCSAGKQ*Q 1102
            NTSDMLDLAV YI+DLQKQVKVL E  A+C+CSA K  Q
Sbjct: 340  NTSDMLDLAVDYIKDLQKQVKVLKESHANCTCSASKNQQ 378


>ref|NP_001148741.1| DNA binding protein [Zea mays] gi|195621758|gb|ACG32709.1| DNA
            binding protein [Zea mays] gi|414887073|tpg|DAA63087.1|
            TPA: putative HLH DNA-binding domain superfamily protein
            isoform 1 [Zea mays] gi|414887074|tpg|DAA63088.1| TPA:
            putative HLH DNA-binding domain superfamily protein
            isoform 2 [Zea mays]
          Length = 374

 Score =  193 bits (491), Expect = 1e-46
 Identities = 144/386 (37%), Positives = 180/386 (46%), Gaps = 24/386 (6%)
 Frame = +2

Query: 17   MYGATAVTSKEDLNLPYRSRDVLSESNSNLLRYQSAPSSLLGELCDDFLPXXXXXXXXXX 196
            MYG+      +DLNLP +       ++S LLRY+SAPS++LG+LC+DFL           
Sbjct: 1    MYGSPV---SKDLNLPVQP----PMASSGLLRYRSAPSTVLGDLCEDFLSSAPRAASPDA 53

Query: 197  XXXXXXP----DLQIEDRTXXXXXXXXXXHGLLPLPPQKQQIAMPMFHPXXXXXXXXXXX 364
                       D  I D                     +QQ    MFH            
Sbjct: 54   GADNVFSRFLADHHIRDDKPSPLASAAVHFPTETDTASQQQQQQMMFHSQQQQEMVS--- 110

Query: 365  MANHAYSVAGSSSMRVDTAEQFHKRSNSSHPNLIARQSSSPAGLFSHLHVDNSTGFGYGT 544
             A        +S +    A      S+S + + + RQSSSPAG   HL+++N    GYG 
Sbjct: 111  -AKSGLYRTVNSGVETAAAAGAGGASSSDNASNLIRQSSSPAGFLDHLNMEN----GYGA 165

Query: 545  V-RGGL--------GNEXXXXXXXXXXXXXXXXXXXXXXXEAAASGNSPEESGSFGA--F 691
            + R G+        G                              G+SPE SG  G    
Sbjct: 166  MLRAGMATADSLAGGGSRLKGQLSFSSRQGSLMSQISEMDSEEVGGSSPEASGGGGRGYI 225

Query: 692  RGNNNYSAWEINSSLQLQN---------GDRNHVSGLSPQFSLPNTSSEMANLERYWEFQ 844
             G    S WE +S+L   N               SGL+ QFS+P TSSEMA +E++ +FQ
Sbjct: 226  PGYPMGSGWEDSSALLSDNLSGVKRPRDSSEPGQSGLTHQFSVPKTSSEMATIEKFLQFQ 285

Query: 845  DAMPCKVRAKRGCATHPRSIAXXXXXXXXXXXXXKLQELVPNMDKQTNTSDMLDLAVSYI 1024
            DA+PCK+RAKRGCATHPRSIA             KLQELVPNMDKQTNTSDMLDLAV YI
Sbjct: 286  DAVPCKIRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMDKQTNTSDMLDLAVDYI 345

Query: 1025 QDLQKQVKVLSEKGASCSCSAGKQ*Q 1102
            +DLQKQVKVL E   +C+CSA K  Q
Sbjct: 346  KDLQKQVKVLKESQDNCTCSASKNQQ 371


>tpg|DAA41104.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
          Length = 367

 Score =  188 bits (478), Expect = 4e-45
 Identities = 142/383 (37%), Positives = 178/383 (46%), Gaps = 21/383 (5%)
 Frame = +2

Query: 17   MYGATAVTSKEDLNLPYRSRDVLSESNSNLLRYQSAPSSLLGELCDDFLPXXXXXXXXXX 196
            MYG+      +DLN+P +   +    +S LLRY+SAPS++LG+LC+DFLP          
Sbjct: 1    MYGSPV---SKDLNVPVQPPMI----SSGLLRYRSAPSTVLGDLCEDFLPSASGAASPDN 53

Query: 197  XXXXXXPDLQIEDRTXXXXXXXXXXHGLLPLPPQKQQIAMPMFHPXXXXXXXXXXXMANH 376
                   +    D            H         QQ    MFH              + 
Sbjct: 54   VFSRFLAEHHTRD-DKPSPPPPAAVHFPSEADMASQQQQQMMFHSHHHQQQQQMVGAKSG 112

Query: 377  AYSVAGSSSMRVDTAEQFHKRSNSSHPNLIARQSSSPAGLFSHLHVDNSTGFGYGTV-RG 553
             Y    S    ++TA        S   NLI RQSSSPAG   HL++DN    GYG + R 
Sbjct: 113  LYRTVSSD---IETAAAVGTGGAS---NLI-RQSSSPAGFLDHLNMDN----GYGAMLRA 161

Query: 554  GLGNEXXXXXXXXXXXXXXXXXXXXXXXEAAASGNSPEESGSFG--AFRGNNNY------ 709
            G+                           +  S    EE G     A  G   Y      
Sbjct: 162  GMATADSLAGSGSRLKGQLSFSSRQGSLMSQISEMDSEEVGGSSPEAAGGGRGYIPGYPM 221

Query: 710  ---SAWEINSSLQLQN---------GDRNHVSGLSPQFSLPNTSSEMANLERYWEFQDAM 853
               S WE +S+L   N               S ++ QFSLP TSSEMA+++++ +FQDA+
Sbjct: 222  GSGSGWEDSSALMSDNLSGLKRPRDSSEPGQSRITHQFSLPKTSSEMASIDKFLQFQDAV 281

Query: 854  PCKVRAKRGCATHPRSIAXXXXXXXXXXXXXKLQELVPNMDKQTNTSDMLDLAVSYIQDL 1033
            PCK+RAKRGCATHPRSIA             KLQELVPNMDKQTNTSDMLDLAV YI++L
Sbjct: 282  PCKIRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMDKQTNTSDMLDLAVDYIKEL 341

Query: 1034 QKQVKVLSEKGASCSCSAGKQ*Q 1102
            QKQVKVL E  A+C+C A K  Q
Sbjct: 342  QKQVKVLKETQANCTCPASKSQQ 364


>ref|NP_001062190.1| Os08g0506700 [Oryza sativa Japonica Group]
            gi|42408931|dbj|BAD10188.1| putative transcription factor
            RAU1 [Oryza sativa Japonica Group]
            gi|113624159|dbj|BAF24104.1| Os08g0506700 [Oryza sativa
            Japonica Group] gi|125603951|gb|EAZ43276.1| hypothetical
            protein OsJ_27873 [Oryza sativa Japonica Group]
            gi|215712322|dbj|BAG94449.1| unnamed protein product
            [Oryza sativa Japonica Group]
          Length = 399

 Score =  187 bits (476), Expect = 6e-45
 Identities = 144/407 (35%), Positives = 183/407 (44%), Gaps = 47/407 (11%)
 Frame = +2

Query: 17   MYGATAVTSKEDLNLPYRSRDVLSESNSNLLRYQSAPSSLLGELCDDFLPXXXXXXXXXX 196
            MYG+      +DLNLP +   +   S+S LLRY+SAPS+LL E CDDFLP          
Sbjct: 1    MYGSPV---SKDLNLPVQPPAM---SSSGLLRYRSAPSTLLAEFCDDFLPPAAAPRAASP 54

Query: 197  XXXXXXP----DLQIEDRTXXXXXXXXXXHGLLPLPPQKQQIAMPMFHPXXXXXXXXXXX 364
                       D QI D++              P  P    +A    H            
Sbjct: 55   DADNVFSRFLADHQIRDKSPPATAAAAAAAAHFPDDPT---MATQHHHQQQMMFQHHPQQ 111

Query: 365  MANHAYSVAGSSSMRVDTAEQFHKRSNSSHPNLIARQSSSPAGLFSHLHVDNSTGF---- 532
            MA+        SS  +D A      +      L+ RQSSSPAG  +HL++DN  G     
Sbjct: 112  MASVEGLYRTVSSTGIDAATAAANAAGGGGGGLL-RQSSSPAGFLNHLNMDNGYGSMLRA 170

Query: 533  GYGTVRGGLGNEXXXXXXXXXXXXXXXXXXXXXXXEAAA-----------------SGNS 661
            G     GG+G                           ++                  G+S
Sbjct: 171  GMAAAGGGVGFRNGANAAAAADSPGGSGGRLKGQLSFSSRQGSLMSQISEMDSEELGGSS 230

Query: 662  PEESGSFGAFRGNNNYSAWEINSSLQ----------------------LQNGDRNHVSGL 775
            PE +G  G   G    S + ++S  +                       QNG      GL
Sbjct: 231  PEGAGGGGGGGGRGYLSGYPMSSGWEESSLMSDTNISGVKRQRDSSEPSQNGGGG--GGL 288

Query: 776  SPQFSLPNTSSEMANLERYWEFQDAMPCKVRAKRGCATHPRSIAXXXXXXXXXXXXXKLQ 955
            + QFSLP TSSEMA +E++ +FQDA+PCK+RAKRGCATHPRSIA             KLQ
Sbjct: 289  AHQFSLPKTSSEMAAIEKFLQFQDAVPCKIRAKRGCATHPRSIAERVRRTRISERIRKLQ 348

Query: 956  ELVPNMDKQTNTSDMLDLAVSYIQDLQKQVKVLSEKGASCSCSAGKQ 1096
            ELVPNMDKQTNT+DMLDLAV YI+DLQKQVK L++  A+C+CSA  Q
Sbjct: 349  ELVPNMDKQTNTADMLDLAVDYIKDLQKQVKGLNDSRANCTCSAKHQ 395


>ref|XP_003574744.1| PREDICTED: transcription factor bHLH130-like [Brachypodium
            distachyon]
          Length = 377

 Score =  187 bits (474), Expect = 1e-44
 Identities = 142/393 (36%), Positives = 178/393 (45%), Gaps = 34/393 (8%)
 Frame = +2

Query: 17   MYGATAVTSKEDLNLPYRSRDVLSESNSNLLRYQSAPSSLLGELCDDFLPXXXXXXXXXX 196
            MYG+      +DLN P         ++S LLRY+SAPS+LLGE+C++FLP          
Sbjct: 1    MYGSPV---SKDLNQPPPP----PMNSSGLLRYRSAPSTLLGEVCEEFLPRAASPDAGAD 53

Query: 197  XXXXXX-PDLQIEDR--------TXXXXXXXXXXHGLLPLPPQKQQIAMPMFHPXXXXXX 349
                    D QI D                       +    Q+QQ    MFH       
Sbjct: 54   NVFSRFLADHQIRDSKPPAPPPPVPVPAGGHFPDEAAMASQQQQQQQQQMMFHSQQQQQQ 113

Query: 350  XXXXXMANHAYSVAGSSSMRVDTAEQFHKRSNSSHPNLIARQSSSPAGLFSHLHVDNS-- 523
                       S  G  S     A         +  + + RQSSSPAG  +HL++DN   
Sbjct: 114  MGGVEGLYRTVSSGGMDSAAAAAA---------AGASSLIRQSSSPAGFLNHLNMDNGYE 164

Query: 524  ----TGFGYGTVRG---------GLGNEXXXXXXXXXXXXXXXXXXXXXXXEAAASGNSP 664
                 G G G   G         G G                              G+SP
Sbjct: 165  SMLRAGMGMGFRNGSTPAAVDSSGSGGSRLKGQLSFSSRQGSLMSQISEMGSEDLGGSSP 224

Query: 665  EESGSF-GAFRGNNNYSAWEINSSLQLQN---------GDRNHVSGLSPQFSLPNTSSEM 814
            E +G   G   G    S WE  SSL  +N               +GL+ QFSLP TSSEM
Sbjct: 225  EAAGGGRGYMPGYPMSSGWE-ESSLMSENMSGMKRPRDSSEPAQNGLAHQFSLPKTSSEM 283

Query: 815  ANLERYWEFQDAMPCKVRAKRGCATHPRSIAXXXXXXXXXXXXXKLQELVPNMDKQTNTS 994
            A +E++ +FQDA+PCK+RAKRGCATHPRSIA             KLQELVPNMDKQTNT+
Sbjct: 284  AAIEKFLQFQDAVPCKIRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTA 343

Query: 995  DMLDLAVSYIQDLQKQVKVLSEKGASCSCSAGK 1093
            DMLDLAV YI++LQ+QVKV++E  A+C+CSA K
Sbjct: 344  DMLDLAVDYIKELQEQVKVINESRANCTCSASK 376


>dbj|BAJ85853.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 391

 Score =  185 bits (470), Expect = 3e-44
 Identities = 147/399 (36%), Positives = 183/399 (45%), Gaps = 39/399 (9%)
 Frame = +2

Query: 17   MYGATAVTSKEDLNLPYRSRDVLSESNSNLLRYQSAPSSLLGELCDDFL--------PXX 172
            MYG+ A    +DLN P    +     +S LLRY+SAPS+LLGE+C++FL        P  
Sbjct: 1    MYGSPA---SKDLNQPPPPMN-----SSGLLRYRSAPSTLLGEVCEEFLQPGPRAASPDA 52

Query: 173  XXXXXXXXXXXXXXPDLQIEDRTXXXXXXXXXXH---GLLPLPPQKQQIAMPMFHPXXXX 343
                           D QI D                  +       Q    MFH     
Sbjct: 53   AAAAAADNVFSRFLADHQIRDTKPPPPPPVAHFPDDAAAMASQHHHHQQQQMMFHSHQQQ 112

Query: 344  XXXXXXXMANHA-YSVAGSSSMRVDTAEQFHKRSNSSHPNLIARQSSSPAGLFSHLHVDN 520
                   +     Y    S+ M  D+A       +SS    + RQSSSPAG  +HL++DN
Sbjct: 113  QQQQMPPVGVEGLYRTVSSAGM--DSAAAATVGGSSS----LLRQSSSPAGFLNHLNMDN 166

Query: 521  S------TGFGYGTVRG-----------GLGNEXXXXXXXXXXXXXXXXXXXXXXXEAAA 649
                    G G G   G           G G                             
Sbjct: 167  GYESMLRQGMGVGFRNGATNAAAAVDSSGSGGGRLKGQLSFSSRQGSLMSQISEMGSEDL 226

Query: 650  SGNSPEESG-SFGAFRGNNNYSAWEINSSLQLQN---------GDRNHVSGLSPQFSLPN 799
             G+SPE +G S G   G    S WE  SSL  +N               +GL+ QFSLP 
Sbjct: 227  GGSSPEGAGGSRGYIPGYPMSSGWE-ESSLMSENMSGMKRPRDSSEPAQNGLAHQFSLPK 285

Query: 800  TSSEMANLERYWEFQDAMPCKVRAKRGCATHPRSIAXXXXXXXXXXXXXKLQELVPNMDK 979
            TSSEMA +E++ +FQDA+PCK+RAKRGCATHPRSIA             KLQELVPNMDK
Sbjct: 286  TSSEMAAIEKFLQFQDAVPCKIRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDK 345

Query: 980  QTNTSDMLDLAVSYIQDLQKQVKVLSEKGASCSCSAGKQ 1096
            QTNT+DMLDLAV YI++LQ+QVKV++E  ASC+CSA KQ
Sbjct: 346  QTNTADMLDLAVDYIKELQEQVKVINESRASCTCSASKQ 384


>gb|EAZ07555.1| hypothetical protein OsI_29809 [Oryza sativa Indica Group]
          Length = 403

 Score =  182 bits (463), Expect = 2e-43
 Identities = 144/409 (35%), Positives = 182/409 (44%), Gaps = 49/409 (11%)
 Frame = +2

Query: 17   MYGATAVTSKEDLNLPYRSRDVLSESNSNLLRYQSAPSSLLGELCDDFLPXXXXXXXXXX 196
            MYG+      +DLNLP +   +   S+S LLRY+SAPS+LL E CDDFLP          
Sbjct: 1    MYGSPV---SKDLNLPVQPPAM---SSSGLLRYRSAPSTLLAEFCDDFLPPAAAPRAASP 54

Query: 197  XXXXXXP----DLQIEDRTXXXXXXXXXXHGLLPLPPQKQQIAMPMFHPXXXXXXXXXXX 364
                       D QI D++                 P    +A    H            
Sbjct: 55   DADNVFSRFLADHQIRDKSPPANGDADGDAAAHF--PDDPTMATQHHHQQQMMFQHHPQQ 112

Query: 365  MANHAYSVAGSSSMRVDTAEQFHKRSNSSHPNLIARQSSSPAGLFSHLHVDNSTGF---- 532
            MA+        SS  +D A      +      L+ RQSSSPAG  +HL++DN  G     
Sbjct: 113  MASGEGLYRTVSSTGIDAATAAANAAGGGGGGLL-RQSSSPAGFLNHLNMDNGYGSMLRA 171

Query: 533  GYGTVRGGLGNEXXXXXXXXXXXXXXXXXXXXXXXEAAAS-------------------G 655
            G     GG G                         + + S                   G
Sbjct: 172  GMAAAGGGGGVGFRNGANAAAAADSPGGSGGRLKGQLSFSSRQGSLMSQISEMDSEELGG 231

Query: 656  NSPEESGSFGAFRGNNNYSAWEINSSLQ----------------------LQNGDRNHVS 769
            +SPE +G  G   G    S + ++S  +                       QNG      
Sbjct: 232  SSPEGAGGGGGGGGRGYLSGYPMSSGWEESSLMSDTNISGVKRQRDSSEPSQNGGGGG-G 290

Query: 770  GLSPQFSLPNTSSEMANLERYWEFQDAMPCKVRAKRGCATHPRSIAXXXXXXXXXXXXXK 949
            GL+ QFSLP TSSEMA +E++ +FQDA+PCK+RAKRGCATHPRSIA             K
Sbjct: 291  GLAHQFSLPKTSSEMAAIEKFLQFQDAVPCKIRAKRGCATHPRSIAERVRRTRISERIRK 350

Query: 950  LQELVPNMDKQTNTSDMLDLAVSYIQDLQKQVKVLSEKGASCSCSAGKQ 1096
            LQELVPNMDKQTNT+DMLDLAV YI+DLQKQVK L++  A+C+CSA  Q
Sbjct: 351  LQELVPNMDKQTNTADMLDLAVDYIKDLQKQVKGLNDSRANCTCSAKHQ 399


>ref|XP_004957992.1| PREDICTED: transcription factor bHLH130-like isoform X4 [Setaria
            italica]
          Length = 388

 Score =  179 bits (454), Expect = 2e-42
 Identities = 142/382 (37%), Positives = 175/382 (45%), Gaps = 37/382 (9%)
 Frame = +2

Query: 17   MYGATAVTSKEDLNLPYRSRDVLSESNSNLLRYQSAPSSLLGELCDDFLPXXXXXXXXXX 196
            MYG+      +DLNLP +       ++S LLRY+SAPS++LGELC+DFLP          
Sbjct: 1    MYGSPV---SKDLNLPVQP----PMASSGLLRYRSAPSTVLGELCEDFLPPGPRAASPDA 53

Query: 197  XXXXXXP----DLQIEDRTXXXXXXXXXXH--GLLPLPPQKQQIAMPMFHPXXXXXXXXX 358
                       D  I D            H  G   +  Q+QQ+     H          
Sbjct: 54   GADNVFARFLADHHIRDDKPSPPPPPPAPHFPGEAGMASQQQQMMFQSQHQQQQEMVDAK 113

Query: 359  XXMANHAYSVAGSSSMRVDTAEQFHKRSNSSHPNLIARQSSSPAGLFSHLHVDNSTGFGY 538
              +    Y    S       A      SN      +ARQSSSPAG   +L++DN    GY
Sbjct: 114  SGL----YRTVSSGMEPASAAAAGVGASN------LARQSSSPAGFLDNLNMDN----GY 159

Query: 539  GTV-RGGL--------------------GNEXXXXXXXXXXXXXXXXXXXXXXXEAAASG 655
            G + R G+                    G                              G
Sbjct: 160  GAMLRAGMSMGFRDGSSAAAATADSLAGGGSRLKGQLSFSSRQGSLMSQISEMDSEEVGG 219

Query: 656  NSPEESGSF-GAFRGNNNYSAWEINSSLQLQN-----GDRNHV----SGLSPQFSLPNTS 805
            +SPE +G   G   G    S WE +SSL  +N       R+ +    +GL  QFSLP TS
Sbjct: 220  SSPEAAGGGRGYIPGYPMGSGWEDSSSLMSENLSGMKRPRDSLEPGQNGLMHQFSLPKTS 279

Query: 806  SEMANLERYWEFQDAMPCKVRAKRGCATHPRSIAXXXXXXXXXXXXXKLQELVPNMDKQT 985
            SEMAN+E++ +FQDA+PCK+RAKRGCATHPRSIA             KLQELVPNMDKQT
Sbjct: 280  SEMANIEKFLQFQDAVPCKIRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMDKQT 339

Query: 986  NTSDMLDLAVSYIQDLQKQVKV 1051
            NTSDMLDLAV YI+DLQKQVKV
Sbjct: 340  NTSDMLDLAVDYIKDLQKQVKV 361


>ref|XP_002445905.1| hypothetical protein SORBIDRAFT_07g027810 [Sorghum bicolor]
            gi|241942255|gb|EES15400.1| hypothetical protein
            SORBIDRAFT_07g027810 [Sorghum bicolor]
          Length = 399

 Score =  174 bits (440), Expect = 9e-41
 Identities = 143/402 (35%), Positives = 172/402 (42%), Gaps = 61/402 (15%)
 Frame = +2

Query: 92   SNSNLLRYQSAPSSLLGELCDDFLPXXXXXXXXXXXXXXXXPDL------QIEDRTXXXX 253
            ++S LLRY+SAPS++LG+LC+D LP                          I D      
Sbjct: 2    TSSGLLRYRSAPSTVLGDLCEDLLPPAPGAGPPRDGADNVISRFLADHHHHIRDDKPSPP 61

Query: 254  XXXXXXHGLLP----LPPQKQQIAMPMFHPXXXXXXXXXXXMANHAYSVAGSSSMRVDTA 421
                      P    +  Q+ Q    MFH                 Y     SS   D A
Sbjct: 62   PPPAAAPAHFPSAADMASQQHQHQQMMFHSQSQQQHMVDANKPGGLYRTV--SSGMEDAA 119

Query: 422  EQFHKRSNSSHPNLIARQSSSPAGLFSHLHVDN--------STGFGY------------- 538
                     +  NLI RQSSSPAG   H  +DN        S G G+             
Sbjct: 120  GTGAGVGVGAASNLI-RQSSSPAGFLDHFSMDNGYGAMLRASMGMGFRDGSGGVGGAGGA 178

Query: 539  -------GTVRGGLGNEXXXXXXXXXXXXXXXXXXXXXXXEAAASGNSPEES--GSFGAF 691
                   G   GG G+                             G+SPE +  G  G  
Sbjct: 179  ATDSLAGGGGGGGSGSGRLKGQLSFSSRQGSLMSQISEMDSEEIGGSSPEAAAGGRGGYI 238

Query: 692  RGNNNYSA-WEINSSL--------------------QLQNGDRNHVSGLSPQFSLPNTSS 808
             G    SA W+ +SS                     Q Q   +N   GL+ QFSLP TSS
Sbjct: 239  PGYPMSSAGWDDSSSALMSDSLSGMKRPRDSSEPGGQQQQQQQNGGGGLAHQFSLPKTSS 298

Query: 809  EMANLERYWEFQDAMPCKVRAKRGCATHPRSIAXXXXXXXXXXXXXKLQELVPNMDKQTN 988
            EMA +E++ +FQDA+PCK+RAKRGCATHPRSIA             KLQELVPNMDKQTN
Sbjct: 299  EMAAIEKFLQFQDAVPCKIRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMDKQTN 358

Query: 989  TSDMLDLAVSYIQDLQKQVKVLSEKGASCSCSAGKQ*QIFNG 1114
            TSDMLDLAV YI+DLQKQVK L+E  ASC+C A K  Q F+G
Sbjct: 359  TSDMLDLAVDYIKDLQKQVKALNESRASCTCPASKH-QQFSG 399


>tpg|DAA47960.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
          Length = 380

 Score =  171 bits (434), Expect = 4e-40
 Identities = 139/400 (34%), Positives = 174/400 (43%), Gaps = 34/400 (8%)
 Frame = +2

Query: 17   MYGATAVTSKEDLNLPYRSRDVLSESNSNLLRYQSAPSSLLGELCDDFLPXXXXXXXXXX 196
            MYG+      +DLNLP +   + S   S LLRY+SAPS++LG LC+D L           
Sbjct: 1    MYGSPV---SKDLNLPAQPPPMAS---SGLLRYRSAPSAVLGGLCEDQLQLPAAAPSAAD 54

Query: 197  XXXXXX-PDLQIEDRTXXXXXXXXXXHGLLPLPPQKQQIAMPMFHPXXXXXXXXXXXMAN 373
                   PD  I D                P P      A    H             + 
Sbjct: 55   NVFSRFLPDHHIRDDK--------------PSPAHFPSAADMASHHQQEQMMFHSQSQSQ 100

Query: 374  HAYSV--AGSSSMRVDTAEQFHKRSNSSHPNLIARQSSSPAGLFSHLHVDN--------S 523
            H      +G    R  ++      +     + + RQSSSPAG   H  +DN        S
Sbjct: 101  HQQETGRSGGGLYRTVSSGMEAGGTGVGAASSLIRQSSSPAGFLDHFGMDNGYGAMLRAS 160

Query: 524  TGFGY---------GTVRGGLGNEXXXXXXXXXXXXXXXXXXXXXXXEAAASGNSPEESG 676
             G G+             GG G                         E     +SP+  G
Sbjct: 161  MGMGFQDGGASDSLAGGGGGSGRLGGQLSFSSRQGSLMSQISEMDSQEDVVGASSPDAGG 220

Query: 677  SFGAFRGNN---NYSAWEINSSLQLQNG----------DRNHVSGLSPQFSLPNTSS-EM 814
               A        +   W+ +SS  L +              H  GL+ QFSLP TSS E+
Sbjct: 221  GGDAAYMPGYPMSSGGWDDSSSALLPDSLPATNKRPRDSLEHGGGLAHQFSLPKTSSSEV 280

Query: 815  ANLERYWEFQDAMPCKVRAKRGCATHPRSIAXXXXXXXXXXXXXKLQELVPNMDKQTNTS 994
            A +E++ +FQDA+PCKVRAKRGCATHPRSIA             KLQELVP+MDKQTNTS
Sbjct: 281  AAIEKFLQFQDAVPCKVRAKRGCATHPRSIAERVRRTKISERIRKLQELVPDMDKQTNTS 340

Query: 995  DMLDLAVSYIQDLQKQVKVLSEKGASCSCSAGKQ*QIFNG 1114
            DMLDLAV YI+DLQKQVK L+E  ASC+C A K  Q F+G
Sbjct: 341  DMLDLAVDYIKDLQKQVKALNESRASCTCPASKHQQRFSG 380


>ref|NP_001147910.1| DNA binding protein [Zea mays] gi|195614520|gb|ACG29090.1| DNA
            binding protein [Zea mays]
          Length = 380

 Score =  171 bits (434), Expect = 4e-40
 Identities = 139/400 (34%), Positives = 174/400 (43%), Gaps = 34/400 (8%)
 Frame = +2

Query: 17   MYGATAVTSKEDLNLPYRSRDVLSESNSNLLRYQSAPSSLLGELCDDFLPXXXXXXXXXX 196
            MYG+      +DLNLP +   + S   S LLRY+SAPS++LG LC+D L           
Sbjct: 1    MYGSPV---SKDLNLPTQPPPMAS---SGLLRYRSAPSAVLGGLCEDQLQLPAAAPSAAD 54

Query: 197  XXXXXX-PDLQIEDRTXXXXXXXXXXHGLLPLPPQKQQIAMPMFHPXXXXXXXXXXXMAN 373
                   PD  I D                P P      A    H             + 
Sbjct: 55   NVFSRFLPDHHIRDDK--------------PSPAHFPSAADMASHHQQEQMMFHSQSQSQ 100

Query: 374  HAYSV--AGSSSMRVDTAEQFHKRSNSSHPNLIARQSSSPAGLFSHLHVDN--------S 523
            H      +G    R  ++      +     + + RQSSSPAG   H  +DN        S
Sbjct: 101  HQQETGRSGGGLYRTVSSGMEAGGTGVGAASSLIRQSSSPAGFLDHFGMDNGYGAMLRAS 160

Query: 524  TGFGY---------GTVRGGLGNEXXXXXXXXXXXXXXXXXXXXXXXEAAASGNSPEESG 676
             G G+             GG G                         E     +SP+  G
Sbjct: 161  MGMGFQDGGASDSLAGGGGGSGRLGGQLSFSSRQGSLMSQISEMDSQEDVVGASSPDAGG 220

Query: 677  SFGAFRGNN---NYSAWEINSSLQLQNG----------DRNHVSGLSPQFSLPNTSS-EM 814
               A        +   W+ +SS  L +              H  GL+ QFSLP TSS E+
Sbjct: 221  GGDAAYMPGYPMSSGGWDDSSSALLPDSLPATNKRPRDSLEHGGGLAHQFSLPKTSSSEV 280

Query: 815  ANLERYWEFQDAMPCKVRAKRGCATHPRSIAXXXXXXXXXXXXXKLQELVPNMDKQTNTS 994
            A +E++ +FQDA+PCKVRAKRGCATHPRSIA             KLQELVP+MDKQTNTS
Sbjct: 281  AAIEKFLQFQDAVPCKVRAKRGCATHPRSIAERVRRTKISERIRKLQELVPDMDKQTNTS 340

Query: 995  DMLDLAVSYIQDLQKQVKVLSEKGASCSCSAGKQ*QIFNG 1114
            DMLDLAV YI+DLQKQVK L+E  ASC+C A K  Q F+G
Sbjct: 341  DMLDLAVDYIKDLQKQVKALNESRASCTCPASKHQQRFSG 380


>tpg|DAA41105.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
          Length = 391

 Score =  171 bits (432), Expect = 8e-40
 Identities = 133/368 (36%), Positives = 169/368 (45%), Gaps = 24/368 (6%)
 Frame = +2

Query: 17   MYGATAVTSKEDLNLPYRSRDVLSESNSNLLRYQSAPSSLLGELCDDFLPXXXXXXXXXX 196
            MYG+      +DLN+P +   +    +S LLRY+SAPS++LG+LC+DFLP          
Sbjct: 1    MYGSPV---SKDLNVPVQPPMI----SSGLLRYRSAPSTVLGDLCEDFLPSASGAASPDN 53

Query: 197  XXXXXXPDLQIEDRTXXXXXXXXXXHGLLPLPPQKQQIAMPMFHPXXXXXXXXXXXMANH 376
                   +    D            H         QQ    MFH              + 
Sbjct: 54   VFSRFLAEHHTRD-DKPSPPPPAAVHFPSEADMASQQQQQMMFHSHHHQQQQQMVGAKSG 112

Query: 377  AYSVAGSSSMRVDTAEQFHKRSNSSHPNLIARQSSSPAGLFSHLHVDNSTGFGYGTV-RG 553
             Y    S    ++TA        S   NLI RQSSSPAG   HL++DN    GYG + R 
Sbjct: 113  LYRTVSSD---IETAAAVGTGGAS---NLI-RQSSSPAGFLDHLNMDN----GYGAMLRA 161

Query: 554  GLGNEXXXXXXXXXXXXXXXXXXXXXXXEAAASGNSPEESGSFG--AFRGNNNY------ 709
            G+                           +  S    EE G     A  G   Y      
Sbjct: 162  GMATADSLAGSGSRLKGQLSFSSRQGSLMSQISEMDSEEVGGSSPEAAGGGRGYIPGYPM 221

Query: 710  ---SAWEINSSLQLQN------------GDRNHVSGLSPQFSLPNTSSEMANLERYWEFQ 844
               S WE +S+L   N              ++  S ++ QFSLP TSSEMA+++++ +FQ
Sbjct: 222  GSGSGWEDSSALMSDNLSGLKRPRDSSEPGQSVQSRITHQFSLPKTSSEMASIDKFLQFQ 281

Query: 845  DAMPCKVRAKRGCATHPRSIAXXXXXXXXXXXXXKLQELVPNMDKQTNTSDMLDLAVSYI 1024
            DA+PCK+RAKRGCATHPRSIA             KLQELVPNMDKQTNTSDMLDLAV YI
Sbjct: 282  DAVPCKIRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMDKQTNTSDMLDLAVDYI 341

Query: 1025 QDLQKQVK 1048
            ++LQKQVK
Sbjct: 342  KELQKQVK 349


>gb|EAZ09563.1| hypothetical protein OsI_31842 [Oryza sativa Indica Group]
          Length = 400

 Score =  165 bits (418), Expect = 3e-38
 Identities = 134/400 (33%), Positives = 171/400 (42%), Gaps = 40/400 (10%)
 Frame = +2

Query: 17   MYGATAVTSKEDLNL-PYRSRDVLSESNSNLLRYQSAPSSLLGELCDDFLPXXXXXXXXX 193
            MYGA      +DL+L P   R     S+  LLRY+SAPS+LLGE+C DF+          
Sbjct: 1    MYGAPV---SKDLSLQPAGVRTPPQMSSPGLLRYRSAPSTLLGEVCGDFVLPGGGGGGGQ 57

Query: 194  XXXXXXXPDLQIEDRTXXXXXXXXXXHGLLPLPPQKQQIAMPMFHPXXXXXXXXXXXMAN 373
                   P                   G    PP+      P                  
Sbjct: 58   LQLQQQRPGSPDHAADTVLARFLAGHGGHDNKPPRPAAHFAPPEDSMASHQQQLMYQSHQ 117

Query: 374  HAYSVAGSSSMRVDTAEQFHKRSNSSHP-NLIARQSSSPAGLFSHLHVDNSTGFGYGTVR 550
                +A +      T       S ++   N + RQSSSPAG  +HL +DN  G+G   +R
Sbjct: 118  QQQQMASAMEGLYRTVSSGGTESTAAAAGNSLLRQSSSPAGFLNHLTMDN--GYGRNMLR 175

Query: 551  GGLGN---------EXXXXXXXXXXXXXXXXXXXXXXXEAAASGNSPEESGSFGAFRGNN 703
             G+G          +                       E  A G    E+GS G      
Sbjct: 176  AGMGGGGGGGDPRLKGQLSFSSRQGSVMSQISEMGSEDEELAGGGGSPEAGSNGGGAARG 235

Query: 704  NY--------SAWEI----------NSSL-----------QLQNGDRNHVSGLSPQFSLP 796
             Y        SAWE           +SSL           QL     +  S   P  +  
Sbjct: 236  GYGGGYAMGSSAWEEPSPPATSLLPDSSLPSKRPRDDLPRQLSLPAASKSSSKPPSSASA 295

Query: 797  NTSSEMANLERYWEFQDAMPCKVRAKRGCATHPRSIAXXXXXXXXXXXXXKLQELVPNMD 976
              S EMA +E++ +FQDA+PCK+RAKRGCATHPRSIA             KLQELVPNM+
Sbjct: 296  AASPEMAAIEKFLQFQDAVPCKIRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNME 355

Query: 977  KQTNTSDMLDLAVSYIQDLQKQVKVLSEKGASCSCSAGKQ 1096
            KQTNT+DMLDLAV YI++LQKQVKVL++  +SC+CSA KQ
Sbjct: 356  KQTNTADMLDLAVDYIKELQKQVKVLNDSRSSCTCSASKQ 395


>ref|XP_004957991.1| PREDICTED: transcription factor bHLH130-like isoform X3 [Setaria
            italica]
          Length = 438

 Score =  165 bits (417), Expect = 4e-38
 Identities = 93/160 (58%), Positives = 109/160 (68%), Gaps = 10/160 (6%)
 Frame = +2

Query: 653  GNSPEESGSF-GAFRGNNNYSAWEINSSLQLQN-----GDRNHV----SGLSPQFSLPNT 802
            G+SPE +G   G   G    S WE +SSL  +N       R+ +    +GL  QFSLP T
Sbjct: 276  GSSPEAAGGGRGYIPGYPMGSGWEDSSSLMSENLSGMKRPRDSLEPGQNGLMHQFSLPKT 335

Query: 803  SSEMANLERYWEFQDAMPCKVRAKRGCATHPRSIAXXXXXXXXXXXXXKLQELVPNMDKQ 982
            SSEMAN+E++ +FQDA+PCK+RAKRGCATHPRSIA             KLQELVPNMDKQ
Sbjct: 336  SSEMANIEKFLQFQDAVPCKIRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMDKQ 395

Query: 983  TNTSDMLDLAVSYIQDLQKQVKVLSEKGASCSCSAGKQ*Q 1102
            TNTSDMLDLAV YI+DLQKQVKVL E  A+C+CSA K  Q
Sbjct: 396  TNTSDMLDLAVDYIKDLQKQVKVLKESHANCTCSASKNQQ 435


>ref|XP_004957179.1| PREDICTED: transcription factor bHLH130-like isoform X2 [Setaria
            italica]
          Length = 397

 Score =  164 bits (414), Expect = 9e-38
 Identities = 106/245 (43%), Positives = 129/245 (52%), Gaps = 33/245 (13%)
 Frame = +2

Query: 458  NLIARQSSSPAGLFSHLHVDNSTG-------FGYGTVRGGLGN-EXXXXXXXXXXXXXXX 613
            N + RQSSSPAG  +HL++DN  G        G G  R G+ +                 
Sbjct: 145  NSLLRQSSSPAGFLNHLNMDNGYGNMLRAGMAGAGGFRNGVSDARLKGQLSFSSRQGSVM 204

Query: 614  XXXXXXXXEAAASGNSPEESGSFGAFR------GNNNYSAWEINSSLQLQNGDRNHVSG- 772
                    E    G+SPE +GS GA R      G     AW   SS       R   SG 
Sbjct: 205  SQISEVGSEELDGGSSPEAAGSNGAPRSYSGIPGGYPMGAWPDESSPTSSGAKRPRDSGG 264

Query: 773  ----------LSPQFSLPN--------TSSEMANLERYWEFQDAMPCKVRAKRGCATHPR 898
                      L+PQ S+P          S+EMA +E++ +FQDA+PCK+RAKRGCATHPR
Sbjct: 265  PAPQNGQRQPLAPQLSVPGGSNGTGKPASAEMAAIEKFLQFQDAVPCKIRAKRGCATHPR 324

Query: 899  SIAXXXXXXXXXXXXXKLQELVPNMDKQTNTSDMLDLAVSYIQDLQKQVKVLSEKGASCS 1078
            SIA             KLQELVPNM+KQTNT+DMLDLAV YI+DLQKQVKVL++   SC+
Sbjct: 325  SIAERVRRTKISERIRKLQELVPNMEKQTNTADMLDLAVDYIKDLQKQVKVLNDGRISCT 384

Query: 1079 CSAGK 1093
            CSAGK
Sbjct: 385  CSAGK 389


>dbj|BAK02702.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 407

 Score =  158 bits (399), Expect = 5e-36
 Identities = 136/416 (32%), Positives = 182/416 (43%), Gaps = 50/416 (12%)
 Frame = +2

Query: 17   MYGATAVTSKEDLNLPYRSRDVLSE-------SNSNLLRYQSAPSSLLGELCDDFLPXXX 175
            MYGA      +DLNLP +     +        S+  LLRY+SAPS++ G+ C D LP   
Sbjct: 1    MYGAPL---SKDLNLPAQQHPAANGVRTPPQMSSPGLLRYRSAPSAMFGDACGDLLPAPA 57

Query: 176  XXXXXXXXXXXXXPDLQIEDRTXXXXXXXXXXHGLLPLPPQK------QQIAMPMFHPXX 337
                         PD   +               +   PP+       +  A  M     
Sbjct: 58   GAGHRPGS-----PDHAADTSFARLLSGHHHHPEMRDKPPRPVASHFAEDAAASMASQQQ 112

Query: 338  XXXXXXXXXMANHAYSVAGSSSMRVDTAEQFHKRSNSSHPNLIARQSSSPAGLFSHLHVD 517
                     MA        +SS   D        +   + +L+ RQSSSPAG  +HL +D
Sbjct: 113  QLMYQSQQQMAAMEGLFRTASSGVTDPVVAGGAANGIGNDSLL-RQSSSPAGFLNHLSMD 171

Query: 518  N----------STGFGYGTVRGGLGNEXXXXXXXXXXXXXXXXXXXXXXXEAAASGNS-- 661
            N          + G G G  R G                           E    G+S  
Sbjct: 172  NGYASMLRAGMAGGGGGGGYRNGDARLKGQLSFSSRQGSVMSQISEMVGEEMGGGGSSGD 231

Query: 662  PEESGSFGAFRGNN----NYSAWEINS-----SLQLQNG---------DRNHVSG----L 775
             +E+GS+G   G      + + W+  S     SL   +G          R   +G    L
Sbjct: 232  DDEAGSYGGIPGYPVVAPSGTGWDEPSPSPPPSLLTSDGMSGPAAKRRPREAANGRSGQL 291

Query: 776  SPQFSLP---NTSSEMANLERYWEFQDAMPCKVRAKRGCATHPRSIAXXXXXXXXXXXXX 946
             PQFSLP     S E+A +E++ +FQD++PCK+RAKRGCATHPRSIA             
Sbjct: 292  KPQFSLPAGSKPSPEIAAIEKFLQFQDSVPCKIRAKRGCATHPRSIAERVRRTKISERIR 351

Query: 947  KLQELVPNMDKQTNTSDMLDLAVSYIQDLQKQVKVLSEKGASCSCSAGKQ*QIFNG 1114
            KLQELVPNM+KQTNTSDMLDLAV YI++LQ QVKV+++  A C+CSAG+  + F G
Sbjct: 352  KLQELVPNMEKQTNTSDMLDLAVDYIKELQMQVKVMNDGRAGCTCSAGRPQKHFAG 407


>ref|XP_002304761.1| basic helix-loop-helix family protein [Populus trichocarpa]
            gi|222842193|gb|EEE79740.1| basic helix-loop-helix family
            protein [Populus trichocarpa]
          Length = 422

 Score =  158 bits (399), Expect = 5e-36
 Identities = 100/249 (40%), Positives = 130/249 (52%), Gaps = 28/249 (11%)
 Frame = +2

Query: 434  KRSNSSHPNLIARQSSSPAGLFSHLHVDNSTGFGYGTVRG--GLGNEXXXXXXXXXXXXX 607
            K S+ ++PNL+ R SSSPAGLFS+++++   G+      G  G GN              
Sbjct: 174  KPSSGNNPNLV-RHSSSPAGLFSNINIEFENGYAVLRDVGDLGAGNRDTTYSAAGRPPSS 232

Query: 608  XXXXXXXXXXEAAASGNSPEESGSFGAFRGNNN---YSAWE------------------- 721
                           G +  +SG FG   GNN      +W+                   
Sbjct: 233  SGIRSTIAEMGNKNMGENSPDSGGFGETPGNNYDYPIGSWDDSAVMSTGSKRYLTDDDRT 292

Query: 722  ---INSSLQLQNGDR-NHVSGLSPQFSLPNTSSEMANLERYWEFQDAMPCKVRAKRGCAT 889
               +NSS   QN +  N    L+   SLP TS+EM+ +E + +FQD++PCK+RAKRGCAT
Sbjct: 293  LSGLNSSETQQNEEAGNRPPMLAHHLSLPKTSAEMSTIENFLQFQDSVPCKIRAKRGCAT 352

Query: 890  HPRSIAXXXXXXXXXXXXXKLQELVPNMDKQTNTSDMLDLAVSYIQDLQKQVKVLSEKGA 1069
            HPRSIA             KLQ+LVPNMDKQTNTSDMLDLAV YI+DLQ+Q K LSE  A
Sbjct: 353  HPRSIAERVRRTRISERMRKLQDLVPNMDKQTNTSDMLDLAVDYIKDLQRQFKALSENRA 412

Query: 1070 SCSCSAGKQ 1096
             C+C   +Q
Sbjct: 413  RCTCLKKQQ 421


>ref|NP_001151233.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
            gi|195645224|gb|ACG42080.1| helix-loop-helix DNA-binding
            domain containing protein [Zea mays]
            gi|414886017|tpg|DAA62031.1| TPA: putative HLH
            DNA-binding domain superfamily protein [Zea mays]
          Length = 408

 Score =  158 bits (399), Expect = 5e-36
 Identities = 106/249 (42%), Positives = 132/249 (53%), Gaps = 37/249 (14%)
 Frame = +2

Query: 458  NLIARQSSSPAGLFSHLHVDNS------TGFGYGTVRGGLGNEXXXXXXXXXXXXXXXXX 619
            N + RQSSSPAG  +HL++DN        G G G  R G+ +                  
Sbjct: 153  NSLIRQSSSPAGFLNHLNMDNGYGSMLRVGMGGGGFRNGVSDARLKGQLSFSSRQGSVMS 212

Query: 620  XXXXXXEAAASGN----SPEESGS--FGAFRGNNNY----------SAWEINSSLQLQNG 751
                       G     SPE +GS   GA RG +             AW   +S    +G
Sbjct: 213  QISEVGSEELDGGGGSGSPEAAGSNASGAARGYSGIPGYPMGGLASGAWPDEASPSPTSG 272

Query: 752  -DRNHVSG------LSPQFSLPN--------TSSEMANLERYWEFQDAMPCKVRAKRGCA 886
              R   SG      L+PQ SLP+         S+EMA +E++ +FQDA+PCK+RAKRGCA
Sbjct: 273  AKRPRDSGPALQQPLAPQLSLPSGKNKGGRAASAEMAAIEKFLQFQDAVPCKIRAKRGCA 332

Query: 887  THPRSIAXXXXXXXXXXXXXKLQELVPNMDKQTNTSDMLDLAVSYIQDLQKQVKVLSEKG 1066
            THPRSIA             KLQELVPNM+KQTNT+DMLDLAV YI+DLQKQVKVL++  
Sbjct: 333  THPRSIAERVRRTKISERIRKLQELVPNMEKQTNTADMLDLAVDYIKDLQKQVKVLNDGR 392

Query: 1067 ASCSCSAGK 1093
            ASC+CSAG+
Sbjct: 393  ASCTCSAGE 401


>ref|XP_006660262.1| PREDICTED: transcription factor bHLH130-like [Oryza brachyantha]
          Length = 226

 Score =  156 bits (394), Expect = 2e-35
 Identities = 82/125 (65%), Positives = 93/125 (74%)
 Frame = +2

Query: 728  SSLQLQNGDRNHVSGLSPQFSLPNTSSEMANLERYWEFQDAMPCKVRAKRGCATHPRSIA 907
            SS   QNG      GL+ QFSLP TSSEMA +E++ +FQDA+PCK+RAKRGCATHPRSIA
Sbjct: 103  SSEPAQNGG----GGLAHQFSLPKTSSEMAAIEKFLQFQDAVPCKIRAKRGCATHPRSIA 158

Query: 908  XXXXXXXXXXXXXKLQELVPNMDKQTNTSDMLDLAVSYIQDLQKQVKVLSEKGASCSCSA 1087
                         KLQELVPNMDKQTNT+DMLDLAV YI+DLQKQVKVLS+  ASC+CSA
Sbjct: 159  ERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQVKVLSDSRASCTCSA 218

Query: 1088 GKQ*Q 1102
             K  Q
Sbjct: 219  SKHQQ 223