BLASTX nr result

ID: Zingiber25_contig00029021 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00029021
         (548 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tpg|DAA42495.1| TPA: hypothetical protein ZEAMMB73_459348 [Zea m...    59   1e-06
gb|EXB96180.1| Uncharacterized protein ycf45 [Morus notabilis]         58   1e-06
ref|XP_006361691.1| PREDICTED: uncharacterized protein ycf45-lik...    57   4e-06
gb|ESW14879.1| hypothetical protein PHAVU_007G025200g [Phaseolus...    55   8e-06

>tpg|DAA42495.1| TPA: hypothetical protein ZEAMMB73_459348 [Zea mays]
          Length = 696

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 31/62 (50%), Positives = 35/62 (56%)
 Frame = +1

Query: 355 PRPDEGASPSAPAVHDGLELFLELVSPRMXXXXXXXXXXXXXXXVVMDLGRKPIARFPSG 534
           P PD GA+  AP     LE FLE+V  RM               V+MDLGR+PIARFPSG
Sbjct: 66  PAPDVGAA--APGARGELEAFLEIVPARMRRGLARHQELRDLVEVIMDLGRRPIARFPSG 123

Query: 535 DW 540
           DW
Sbjct: 124 DW 125


>gb|EXB96180.1| Uncharacterized protein ycf45 [Morus notabilis]
          Length = 688

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 33/71 (46%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
 Frame = +1

Query: 340 SSTMRPRPDEGASPSAPAVHDG--LELFLELVSPRMXXXXXXXXXXXXXXXVVMDLGRKP 513
           SS+        +SP      D   LE+FLEL+ PRM               VVMDLGRKP
Sbjct: 69  SSSPNAASTSSSSPPRSEASDATELEMFLELLPPRMRRELYGHEEIEELIEVVMDLGRKP 128

Query: 514 IARFPSGDWIM 546
           IARFPSGDWI+
Sbjct: 129 IARFPSGDWII 139


>ref|XP_006361691.1| PREDICTED: uncharacterized protein ycf45-like [Solanum tuberosum]
          Length = 762

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 36/79 (45%), Positives = 42/79 (53%), Gaps = 14/79 (17%)
 Frame = +1

Query: 352 RPRPDEGA-------SPSAPA-------VHDGLELFLELVSPRMXXXXXXXXXXXXXXXV 489
           RPR   GA       SP++P+       V   L+LFLELV  RM               V
Sbjct: 69  RPRERSGAGNGLSLFSPNSPSTSCSGDEVVSDLDLFLELVPLRMRNELFMHQEIGKLVEV 128

Query: 490 VMDLGRKPIARFPSGDWIM 546
           VMDLGRKP+ARFPSGDWI+
Sbjct: 129 VMDLGRKPLARFPSGDWII 147


>gb|ESW14879.1| hypothetical protein PHAVU_007G025200g [Phaseolus vulgaris]
          Length = 666

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 32/67 (47%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
 Frame = +1

Query: 352 RPRPDE--GASPSAPAVHDGLELFLELVSPRMXXXXXXXXXXXXXXXVVMDLGRKPIARF 525
           RP  D   G+SPS     D L LFLEL+  +M               VVMDLGRKP+ARF
Sbjct: 53  RPSSDRFYGSSPSTSRPED-LSLFLELLPLKMRRELYRHREIGGLIEVVMDLGRKPLARF 111

Query: 526 PSGDWIM 546
           PSGDW++
Sbjct: 112 PSGDWVI 118


Top