BLASTX nr result

ID: Zingiber25_contig00029000 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00029000
         (342 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD35259.1| unknown protein [Oryza sativa Japonica Group] gi...    56   4e-06
ref|XP_002452944.1| hypothetical protein SORBIDRAFT_04g035360 [S...    55   1e-05

>dbj|BAD35259.1| unknown protein [Oryza sativa Japonica Group]
           gi|51091118|dbj|BAD35815.1| unknown protein [Oryza
           sativa Japonica Group]
          Length = 777

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 38/85 (44%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
 Frame = +3

Query: 12  RRPRSQLRVGPDAAQVGG--LLHRK*VLLRLAGQHRNLIVVANGRSGRRDEEIKAGAEAY 185
           R+ R QLR   D A   G  LL R+   L L  QH  L++  +GR G  DEE  AGAEA 
Sbjct: 275 RKLRPQLR---DVAHAVGRRLLRRQRPHLLLPEQHLLLLLHRHGRRGDGDEEASAGAEAD 331

Query: 186 NGYVQQRLQGSKHGQSKGEGAAEVE 260
           +G+VQ  +QG    +++G+GAA VE
Sbjct: 332 HGHVQHGVQGGAEREAEGDGAAAVE 356


>ref|XP_002452944.1| hypothetical protein SORBIDRAFT_04g035360 [Sorghum bicolor]
           gi|241932775|gb|EES05920.1| hypothetical protein
           SORBIDRAFT_04g035360 [Sorghum bicolor]
          Length = 781

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 37/91 (40%), Positives = 44/91 (48%), Gaps = 3/91 (3%)
 Frame = +1

Query: 1   SNGSDGLDR---SFESVPTPLKSVDYSTGNEFSYXXXXXXXXXXXXXXXXXXXXXXXXXX 171
           SNGSDGLD    SFE+  TP +  D S GNE +                           
Sbjct: 262 SNGSDGLDHQQHSFEASRTPSRWGD-SFGNESTSHSQTSTSSWCSQPSDEMEAEMKRLRL 320

Query: 172 XXXHTMDMYNNACKEANTANQKARELQKWKI 264
               TMDMY+ ACKEA +A QKA ELQ+WK+
Sbjct: 321 ELKQTMDMYSTACKEALSAKQKAMELQRWKM 351


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