BLASTX nr result
ID: Zingiber25_contig00028999
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00028999
(387 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004510759.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B... 109 4e-22
ref|XP_006829099.1| hypothetical protein AMTR_s00001p00263220 [A... 105 8e-21
ref|XP_004976579.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B... 100 3e-19
ref|XP_002448374.1| hypothetical protein SORBIDRAFT_06g026220 [S... 100 3e-19
ref|NP_001150789.1| RING zinc finger protein-like [Zea mays] gi|... 98 1e-18
gb|ESW07097.1| hypothetical protein PHAVU_010G101100g [Phaseolus... 98 1e-18
ref|XP_003622508.1| RING-H2 finger protein ATL2C [Medicago trunc... 97 3e-18
ref|XP_006652684.1| PREDICTED: RING-H2 finger protein ATL11-like... 96 5e-18
ref|NP_001147218.1| RING zinc finger protein-like [Zea mays] gi|... 96 5e-18
ref|XP_002278353.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B... 96 5e-18
ref|XP_003580376.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B... 96 6e-18
ref|NP_001151235.1| RING zinc finger protein-like [Zea mays] gi|... 96 6e-18
gb|EAZ31735.1| hypothetical protein OsJ_15887 [Oryza sativa Japo... 96 6e-18
gb|EAY95267.1| hypothetical protein OsI_17090 [Oryza sativa Indi... 96 6e-18
ref|NP_001053644.1| Os04g0579200 [Oryza sativa Japonica Group] g... 96 6e-18
gb|EMJ19724.1| hypothetical protein PRUPE_ppa012584mg [Prunus pe... 95 8e-18
gb|ESW30511.1| hypothetical protein PHAVU_002G158800g [Phaseolus... 95 1e-17
ref|XP_004143977.1| PREDICTED: RING-H2 zinc finger protein RHA1a... 95 1e-17
ref|XP_002452752.1| hypothetical protein SORBIDRAFT_04g031790 [S... 94 1e-17
ref|XP_004953456.1| PREDICTED: probable E3 ubiquitin-protein lig... 94 2e-17
>ref|XP_004510759.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B-like [Cicer arietinum]
Length = 173
Score = 109 bits (272), Expect = 4e-22
Identities = 46/74 (62%), Positives = 58/74 (78%), Gaps = 1/74 (1%)
Frame = -1
Query: 267 PVVPAELIQEVSPATRFGDLAG-GESCCCAVCLSEFEPADEVRRMSDCRHVFHRHCVDRW 91
P V A LIQE+ PA++FGDL G E CCCAVCL EF +E+R + +CRH+FHR+CVDRW
Sbjct: 66 PSVSALLIQELLPASKFGDLVGVEEGCCCAVCLFEFSEEEEIRCLRNCRHIFHRNCVDRW 125
Query: 90 LEHGQRTCPLCRAP 49
++H Q+TCPLCR P
Sbjct: 126 IDHDQKTCPLCRTP 139
>ref|XP_006829099.1| hypothetical protein AMTR_s00001p00263220 [Amborella trichopoda]
gi|548834078|gb|ERM96515.1| hypothetical protein
AMTR_s00001p00263220 [Amborella trichopoda]
Length = 166
Score = 105 bits (261), Expect = 8e-21
Identities = 50/105 (47%), Positives = 69/105 (65%), Gaps = 5/105 (4%)
Frame = -1
Query: 345 NWISRCLGLSDSDADLHQAVGICLLLPVVP---AELIQEVSPATRFGDLAGG--ESCCCA 181
+WI RCLGL+D + + ++ PV P A LI+E+ P RF +L S CA
Sbjct: 31 SWICRCLGLNDFLDSANPQIERPVISPVFPSVSAILIREILPVVRFEELTDAFHASESCA 90
Query: 180 VCLSEFEPADEVRRMSDCRHVFHRHCVDRWLEHGQRTCPLCRAPL 46
VCL EFE +E+RR+++C H+FHR C+DRW++H Q+TCPLCR PL
Sbjct: 91 VCLYEFEGREEIRRLANCCHIFHRSCLDRWMDHDQKTCPLCRTPL 135
>ref|XP_004976579.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B-like [Setaria italica]
Length = 218
Score = 99.8 bits (247), Expect = 3e-19
Identities = 48/77 (62%), Positives = 56/77 (72%), Gaps = 5/77 (6%)
Frame = -1
Query: 261 VPAELIQEVSPATRFGDLA-----GGESCCCAVCLSEFEPADEVRRMSDCRHVFHRHCVD 97
VPA +I+EV P RF +LA GG+ CAVCLS DEVRR+S+CRH FHR C+D
Sbjct: 91 VPAMVIEEVLPVVRFDELAAACAGGGD---CAVCLSGIGGGDEVRRLSNCRHAFHRGCLD 147
Query: 96 RWLEHGQRTCPLCRAPL 46
RW+EH QRTCPLCRAPL
Sbjct: 148 RWMEHDQRTCPLCRAPL 164
>ref|XP_002448374.1| hypothetical protein SORBIDRAFT_06g026220 [Sorghum bicolor]
gi|241939557|gb|EES12702.1| hypothetical protein
SORBIDRAFT_06g026220 [Sorghum bicolor]
Length = 194
Score = 99.8 bits (247), Expect = 3e-19
Identities = 48/76 (63%), Positives = 56/76 (73%), Gaps = 4/76 (5%)
Frame = -1
Query: 261 VPAELIQEVSPATRFGDL----AGGESCCCAVCLSEFEPADEVRRMSDCRHVFHRHCVDR 94
VPA +I+EV P RF +L GG+ CAVCLS DEVRR+S+CRHVFHR C+DR
Sbjct: 66 VPAMVIEEVLPVVRFDELEEARVGGD---CAVCLSGIGGRDEVRRLSNCRHVFHRACLDR 122
Query: 93 WLEHGQRTCPLCRAPL 46
W+EH QRTCPLCRAPL
Sbjct: 123 WMEHDQRTCPLCRAPL 138
>ref|NP_001150789.1| RING zinc finger protein-like [Zea mays]
gi|195641850|gb|ACG40393.1| RING zinc finger
protein-like [Zea mays] gi|414585776|tpg|DAA36347.1|
TPA: putative RING zinc finger domain superfamily
protein [Zea mays]
Length = 213
Score = 98.2 bits (243), Expect = 1e-18
Identities = 47/73 (64%), Positives = 54/73 (73%), Gaps = 1/73 (1%)
Frame = -1
Query: 261 VPAELIQEVSPATRFGDLA-GGESCCCAVCLSEFEPADEVRRMSDCRHVFHRHCVDRWLE 85
VPA +I+EV P RF +L E CAVCLS DEVRR+S+CRHVFHR C+DRW+E
Sbjct: 87 VPAMVIEEVLPVVRFDELELEPEPGDCAVCLSGIGGRDEVRRLSNCRHVFHRACLDRWME 146
Query: 84 HGQRTCPLCRAPL 46
H QRTCPLCRAPL
Sbjct: 147 HDQRTCPLCRAPL 159
>gb|ESW07097.1| hypothetical protein PHAVU_010G101100g [Phaseolus vulgaris]
Length = 207
Score = 97.8 bits (242), Expect = 1e-18
Identities = 40/73 (54%), Positives = 54/73 (73%)
Frame = -1
Query: 267 PVVPAELIQEVSPATRFGDLAGGESCCCAVCLSEFEPADEVRRMSDCRHVFHRHCVDRWL 88
P V A LI+++ P +FG+ +G SC CAVCL EF +E+R M +C+H+FHR CVDRW+
Sbjct: 105 PSVSALLIRDILPVAKFGE-SGENSCACAVCLFEFSEEEEIRCMRNCKHIFHRACVDRWI 163
Query: 87 EHGQRTCPLCRAP 49
+H Q+TCPLCR P
Sbjct: 164 DHDQKTCPLCRTP 176
>ref|XP_003622508.1| RING-H2 finger protein ATL2C [Medicago truncatula]
gi|355497523|gb|AES78726.1| RING-H2 finger protein ATL2C
[Medicago truncatula]
Length = 381
Score = 96.7 bits (239), Expect = 3e-18
Identities = 41/72 (56%), Positives = 54/72 (75%), Gaps = 1/72 (1%)
Frame = -1
Query: 267 PVVPAELIQEVSPATRFGDLAGGES-CCCAVCLSEFEPADEVRRMSDCRHVFHRHCVDRW 91
P V A LI+E PAT++G+L E CCCAVCL EF +E+R + +CRH+FHR+CVDRW
Sbjct: 64 PSVSALLIREFLPATKYGELTDTEEGCCCAVCLFEFSEEEEIRCLKNCRHIFHRNCVDRW 123
Query: 90 LEHGQRTCPLCR 55
++ Q+TCPLCR
Sbjct: 124 IDLDQKTCPLCR 135
>ref|XP_006652684.1| PREDICTED: RING-H2 finger protein ATL11-like, partial [Oryza
brachyantha]
Length = 183
Score = 95.9 bits (237), Expect = 5e-18
Identities = 48/77 (62%), Positives = 57/77 (74%), Gaps = 5/77 (6%)
Frame = -1
Query: 261 VPAELIQEVSPATRFGDLA----GGESCCCAVCLSEFEPADEVRRMSDCRHVFHRHCVDR 94
VPA +I+EV P RF +LA GG+ CAVCLS DEVRR+++CRHVFHR C+DR
Sbjct: 57 VPAMVIEEVLPVVRFDELATVCGGGD---CAVCLSGIGGGDEVRRLTNCRHVFHRGCLDR 113
Query: 93 WLEH-GQRTCPLCRAPL 46
W+EH QRTCPLCRAPL
Sbjct: 114 WMEHDDQRTCPLCRAPL 130
>ref|NP_001147218.1| RING zinc finger protein-like [Zea mays]
gi|195608648|gb|ACG26154.1| RING zinc finger
protein-like [Zea mays] gi|413923449|gb|AFW63381.1|
putative RING zinc finger domain superfamily protein
[Zea mays]
Length = 220
Score = 95.9 bits (237), Expect = 5e-18
Identities = 45/80 (56%), Positives = 51/80 (63%), Gaps = 8/80 (10%)
Frame = -1
Query: 261 VPAELIQEVSPATRFGDLA--------GGESCCCAVCLSEFEPADEVRRMSDCRHVFHRH 106
VPA I+E P RF +LA G C CAVCL DEVRR+ +CRH FHR
Sbjct: 84 VPAVRIEEALPVVRFDELAAAARGDGYGDCDCDCAVCLDGIGGGDEVRRLGNCRHAFHRA 143
Query: 105 CVDRWLEHGQRTCPLCRAPL 46
C+DRW+ HGQRTCPLCRAPL
Sbjct: 144 CLDRWMAHGQRTCPLCRAPL 163
>ref|XP_002278353.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B [Vitis vinifera]
Length = 167
Score = 95.9 bits (237), Expect = 5e-18
Identities = 45/98 (45%), Positives = 66/98 (67%), Gaps = 5/98 (5%)
Frame = -1
Query: 327 LGLSD---SDADLHQAVGICLLLPVVPAELIQEVSPATRFGD-LAGGESC-CCAVCLSEF 163
LGLSD +D + P V A LI+E+ P +FG+ + GG++ CAVCL +F
Sbjct: 37 LGLSDFLETDVSWSETQAQVPEYPPVSAVLIREILPVMKFGEAVCGGDAPESCAVCLYDF 96
Query: 162 EPADEVRRMSDCRHVFHRHCVDRWLEHGQRTCPLCRAP 49
E +E+RR+++C+H+FHR C+DRW++H Q+TCPLCR P
Sbjct: 97 EVGEEIRRLTNCKHIFHRSCLDRWMDHDQKTCPLCRTP 134
>ref|XP_003580376.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B-like [Brachypodium
distachyon]
Length = 216
Score = 95.5 bits (236), Expect = 6e-18
Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 5/82 (6%)
Frame = -1
Query: 276 LLLPVVPAELIQEVSPATRFGDLA-----GGESCCCAVCLSEFEPADEVRRMSDCRHVFH 112
LL V A +I+EV P R+ +LA GG+ CAVCLS DEVRR+++CRH FH
Sbjct: 82 LLFRPVSALVIEEVLPVVRYDELAPAQCGGGD---CAVCLSGIGGGDEVRRLTNCRHAFH 138
Query: 111 RHCVDRWLEHGQRTCPLCRAPL 46
R C+DRW+EH QRTCPLCRAPL
Sbjct: 139 RACLDRWMEHDQRTCPLCRAPL 160
>ref|NP_001151235.1| RING zinc finger protein-like [Zea mays]
gi|195645232|gb|ACG42084.1| RING zinc finger
protein-like [Zea mays] gi|223949791|gb|ACN28979.1|
unknown [Zea mays] gi|413953531|gb|AFW86180.1| putative
RING zinc finger domain superfamily protein [Zea mays]
Length = 154
Score = 95.5 bits (236), Expect = 6e-18
Identities = 51/112 (45%), Positives = 61/112 (54%), Gaps = 12/112 (10%)
Frame = -1
Query: 345 NWISRCLGLSDSDADLHQAVGICLLLPVVPAELIQEVSPATRFGDLAGG----------- 199
+W+ R G +D+DAD P A+ ++E SPA RF L+ G
Sbjct: 31 SWLLRLAGAADADADTDAGHP---RHPCAAAQRLEEHSPAVRFDSLSCGSGGGVTAPRPL 87
Query: 198 -ESCCCAVCLSEFEPADEVRRMSDCRHVFHRHCVDRWLEHGQRTCPLCRAPL 46
E CC VCL +F A EVRR CRHVFHR C+DRW HG RTCPLCR PL
Sbjct: 88 PEGCC--VCLGDFHAAAEVRRARGCRHVFHRACLDRWAAHGHRTCPLCRTPL 137
>gb|EAZ31735.1| hypothetical protein OsJ_15887 [Oryza sativa Japonica Group]
Length = 212
Score = 95.5 bits (236), Expect = 6e-18
Identities = 48/78 (61%), Positives = 56/78 (71%), Gaps = 6/78 (7%)
Frame = -1
Query: 261 VPAELIQEVSPATRFGDL-AGGESCC----CAVCLSEFEPADEVRRMSDCRHVFHRHCVD 97
VPA +I+EV P RF +L A + C CAVCLS DEVRR+S+CRHVFHR C+D
Sbjct: 82 VPAMVIEEVLPVVRFDELVAAAPAVCGGGDCAVCLSGIGGGDEVRRLSNCRHVFHRGCLD 141
Query: 96 RWLEH-GQRTCPLCRAPL 46
RW+EH QRTCPLCRAPL
Sbjct: 142 RWMEHDDQRTCPLCRAPL 159
>gb|EAY95267.1| hypothetical protein OsI_17090 [Oryza sativa Indica Group]
Length = 212
Score = 95.5 bits (236), Expect = 6e-18
Identities = 48/78 (61%), Positives = 56/78 (71%), Gaps = 6/78 (7%)
Frame = -1
Query: 261 VPAELIQEVSPATRFGDL-AGGESCC----CAVCLSEFEPADEVRRMSDCRHVFHRHCVD 97
VPA +I+EV P RF +L A + C CAVCLS DEVRR+S+CRHVFHR C+D
Sbjct: 82 VPAMVIEEVLPVVRFDELVAAAPAVCGGGDCAVCLSGIGGGDEVRRLSNCRHVFHRGCLD 141
Query: 96 RWLEH-GQRTCPLCRAPL 46
RW+EH QRTCPLCRAPL
Sbjct: 142 RWMEHDDQRTCPLCRAPL 159
>ref|NP_001053644.1| Os04g0579200 [Oryza sativa Japonica Group]
gi|32488512|emb|CAE03264.1| OSJNBa0011J08.19 [Oryza
sativa Japonica Group] gi|113565215|dbj|BAF15558.1|
Os04g0579200 [Oryza sativa Japonica Group]
gi|215713537|dbj|BAG94674.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 212
Score = 95.5 bits (236), Expect = 6e-18
Identities = 48/78 (61%), Positives = 56/78 (71%), Gaps = 6/78 (7%)
Frame = -1
Query: 261 VPAELIQEVSPATRFGDL-AGGESCC----CAVCLSEFEPADEVRRMSDCRHVFHRHCVD 97
VPA +I+EV P RF +L A + C CAVCLS DEVRR+S+CRHVFHR C+D
Sbjct: 82 VPAMVIEEVLPVVRFDELVAAAPAVCGGGDCAVCLSGIGGGDEVRRLSNCRHVFHRGCLD 141
Query: 96 RWLEH-GQRTCPLCRAPL 46
RW+EH QRTCPLCRAPL
Sbjct: 142 RWMEHDDQRTCPLCRAPL 159
>gb|EMJ19724.1| hypothetical protein PRUPE_ppa012584mg [Prunus persica]
Length = 163
Score = 95.1 bits (235), Expect = 8e-18
Identities = 40/73 (54%), Positives = 53/73 (72%)
Frame = -1
Query: 267 PVVPAELIQEVSPATRFGDLAGGESCCCAVCLSEFEPADEVRRMSDCRHVFHRHCVDRWL 88
P V A LI+E P +F DLAG CAVCL EFE +E+R +++C+H+FHR C+DRW+
Sbjct: 60 PPVSALLIREFLPVIKFRDLAGDRPENCAVCLYEFEVEEEIRCLTNCKHIFHRACLDRWM 119
Query: 87 EHGQRTCPLCRAP 49
+H Q+TCPLCR P
Sbjct: 120 DHDQKTCPLCRTP 132
>gb|ESW30511.1| hypothetical protein PHAVU_002G158800g [Phaseolus vulgaris]
Length = 227
Score = 94.7 bits (234), Expect = 1e-17
Identities = 40/75 (53%), Positives = 55/75 (73%), Gaps = 1/75 (1%)
Frame = -1
Query: 270 LPVVPAELIQEVSPATRFGDLAGGESC-CCAVCLSEFEPADEVRRMSDCRHVFHRHCVDR 94
L + A LI+E+ P +F ++A E+ CAVCL EFE DE+RR+++CRH+FHR C+DR
Sbjct: 125 LQSMSAVLIREILPVVKFSEMAAAEAAESCAVCLYEFEGEDEIRRLTNCRHIFHRGCLDR 184
Query: 93 WLEHGQRTCPLCRAP 49
W+ + QRTCPLCR P
Sbjct: 185 WMGYDQRTCPLCRTP 199
>ref|XP_004143977.1| PREDICTED: RING-H2 zinc finger protein RHA1a-like, partial [Cucumis
sativus]
Length = 117
Score = 94.7 bits (234), Expect = 1e-17
Identities = 40/72 (55%), Positives = 53/72 (73%)
Frame = -1
Query: 270 LPVVPAELIQEVSPATRFGDLAGGESCCCAVCLSEFEPADEVRRMSDCRHVFHRHCVDRW 91
L + A L++E+ P +F DL CC AVCL EFE DE+RR+++CRH+FHR C+DRW
Sbjct: 2 LDPLSAALLREILPVVKFSDLLDPPDCC-AVCLYEFESDDEIRRLANCRHIFHRGCLDRW 60
Query: 90 LEHGQRTCPLCR 55
+ +GQRTCPLCR
Sbjct: 61 IGYGQRTCPLCR 72
>ref|XP_002452752.1| hypothetical protein SORBIDRAFT_04g031790 [Sorghum bicolor]
gi|241932583|gb|EES05728.1| hypothetical protein
SORBIDRAFT_04g031790 [Sorghum bicolor]
Length = 221
Score = 94.4 bits (233), Expect = 1e-17
Identities = 46/77 (59%), Positives = 52/77 (67%), Gaps = 5/77 (6%)
Frame = -1
Query: 261 VPAELIQEVSPATRFGDLAGGE----SCCCAVCLSEFEPADEVRRMSDCRHVFHRHCVDR 94
VP+ LI+E P RF +L G C CAVCLS DEVRR+S+CRH FHR C+DR
Sbjct: 81 VPSVLIEEALPVVRFDELGGTACGDGDCDCAVCLSGIGARDEVRRLSNCRHAFHRACLDR 140
Query: 93 W-LEHGQRTCPLCRAPL 46
W L H QRTCPLCRAPL
Sbjct: 141 WMLAHDQRTCPLCRAPL 157
>ref|XP_004953456.1| PREDICTED: probable E3 ubiquitin-protein ligase RHA2B-like [Setaria
italica]
Length = 212
Score = 94.0 bits (232), Expect = 2e-17
Identities = 45/76 (59%), Positives = 52/76 (68%), Gaps = 4/76 (5%)
Frame = -1
Query: 261 VPAELIQEVSPATRFGDLAGGESCC----CAVCLSEFEPADEVRRMSDCRHVFHRHCVDR 94
VPA I+E P RF +LAG + C CAVCLS DEVRR+S+CRH FHR C+D
Sbjct: 83 VPAVHIEEALPVVRFEELAG--TACGGGDCAVCLSGIGAGDEVRRLSNCRHAFHRGCLDH 140
Query: 93 WLEHGQRTCPLCRAPL 46
W+ H QRTCPLCRAPL
Sbjct: 141 WMAHDQRTCPLCRAPL 156