BLASTX nr result

ID: Zingiber25_contig00028779 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00028779
         (606 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004960270.1| PREDICTED: transport inhibitor response 1-li...   271   1e-70
gb|EMJ02922.1| hypothetical protein PRUPE_ppa003344mg [Prunus pe...   266   4e-69
ref|NP_001054666.2| Os05g0150500 [Oryza sativa Japonica Group] g...   265   1e-68
sp|Q0DKP3.2|TIR1A_ORYSJ RecName: Full=Transport inhibitor respon...   265   1e-68
gb|AAV32196.1| putative transport inhibitor response TIR1 [Oryza...   265   1e-68
ref|XP_006654054.1| PREDICTED: transport inhibitor response 1-li...   264   1e-68
ref|XP_004309692.1| PREDICTED: protein TRANSPORT INHIBITOR RESPO...   264   1e-68
gb|EXC34697.1| Protein TRANSPORT INHIBITOR RESPONSE 1 [Morus not...   264   2e-68
gb|AFW82629.1| hypothetical protein ZEAMMB73_053611 [Zea mays]        263   3e-68
gb|ESW16555.1| hypothetical protein PHAVU_007G166200g [Phaseolus...   262   5e-68
gb|AFS44506.1| auxin receptor 1, partial [Fragaria x ananassa]        262   5e-68
ref|NP_567135.1| protein TRANSPORT INHIBITOR RESPONSE 1 [Arabido...   262   6e-68
ref|XP_006352806.1| PREDICTED: protein TRANSPORT INHIBITOR RESPO...   262   6e-68
ref|XP_003568922.1| PREDICTED: transport inhibitor response 1-li...   262   6e-68
ref|XP_006402320.1| hypothetical protein EUTSA_v10005852mg [Eutr...   261   8e-68
ref|XP_006290792.1| hypothetical protein CARUB_v10016894mg [Caps...   261   1e-67
ref|XP_006290791.1| hypothetical protein CARUB_v10016894mg [Caps...   261   1e-67
gb|EOX94947.1| F-box/RNI-like superfamily protein isoform 1 [The...   260   2e-67
ref|XP_002440601.1| hypothetical protein SORBIDRAFT_09g003870 [S...   260   2e-67
gb|ADV56682.1| F-box/leucine rich repeat protein [Phaseolus vulg...   259   3e-67

>ref|XP_004960270.1| PREDICTED: transport inhibitor response 1-like protein
           Os05g0150500-like [Setaria italica]
          Length = 590

 Score =  271 bits (693), Expect = 1e-70
 Identities = 137/199 (68%), Positives = 157/199 (78%), Gaps = 4/199 (2%)
 Frame = -3

Query: 604 GLIAVASSCKLLRKLQIVPSDP----PYCPLTEIGLIAVSSGCVMLESVLYFCRQMTNSA 437
           GL AVASSC  L++L++ PS P        LTE GL+ VS+GC MLESVLYFCR+MTN A
Sbjct: 340 GLAAVASSCNKLQELRVFPSSPFDAAEQVSLTERGLVDVSAGCPMLESVLYFCRRMTNEA 399

Query: 436 LLTIANNCPNLTCFRLCITKPYTPDYITQEPLDAGFGAIVESCKDLRRLSISGLLTDRVF 257
           L+TIA N PN TCFRLCI +P+TPDYIT +PLDAGF AIVESCK LRRLS+SGLLTDRVF
Sbjct: 400 LITIAKNRPNFTCFRLCIIEPHTPDYITHQPLDAGFSAIVESCKGLRRLSVSGLLTDRVF 459

Query: 256 ITIGTSANRLEWLSVCCAGDGDAGLHYILSGCRKLRMLEIRKCPFGIKALLDNADKLKTM 77
            +IG  A+RLE LS+  AG+ D GLHYILSGC+ L+ LEIR CPFG K LL NA KL+TM
Sbjct: 460 KSIGAHADRLEMLSIAFAGNSDLGLHYILSGCKSLKKLEIRDCPFGDKPLLANAAKLETM 519

Query: 76  RCLWMSSCSVTLGECRLLA 20
           R LWMSSCS+TLG CR LA
Sbjct: 520 RSLWMSSCSLTLGACRQLA 538


>gb|EMJ02922.1| hypothetical protein PRUPE_ppa003344mg [Prunus persica]
          Length = 584

 Score =  266 bits (679), Expect = 4e-69
 Identities = 135/198 (68%), Positives = 153/198 (77%), Gaps = 4/198 (2%)
 Frame = -3

Query: 604 GLIAVASSCKLLRKLQIVPSDP----PYCPLTEIGLIAVSSGCVMLESVLYFCRQMTNSA 437
           GL A+A SCK LR+L++ PSDP    P   LTE GLI+VS GC  L+SVLYFCRQM+N A
Sbjct: 328 GLDALAVSCKDLRELRVFPSDPFVVEPNVLLTEQGLISVSEGCPKLQSVLYFCRQMSNDA 387

Query: 436 LLTIANNCPNLTCFRLCITKPYTPDYITQEPLDAGFGAIVESCKDLRRLSISGLLTDRVF 257
           L+TIA N PN TCFRLCI +P TPDY+T EPLD GFGAIVE CKDLRRLS+SGLLTDR F
Sbjct: 388 LITIARNQPNFTCFRLCIIEPRTPDYLTLEPLDVGFGAIVEHCKDLRRLSVSGLLTDRAF 447

Query: 256 ITIGTSANRLEWLSVCCAGDGDAGLHYILSGCRKLRMLEIRKCPFGIKALLDNADKLKTM 77
             IGT   +LE LS+  AGD D GLH++LSGC  LR LEIR CPFG KALL NA KL+TM
Sbjct: 448 EYIGTHGKKLEMLSLAFAGDSDLGLHHVLSGCENLRKLEIRDCPFGDKALLANAAKLETM 507

Query: 76  RCLWMSSCSVTLGECRLL 23
           R LWMSSCSV+ G C+LL
Sbjct: 508 RSLWMSSCSVSYGACKLL 525


>ref|NP_001054666.2| Os05g0150500 [Oryza sativa Japonica Group]
           gi|255676026|dbj|BAF16580.2| Os05g0150500 [Oryza sativa
           Japonica Group]
          Length = 255

 Score =  265 bits (676), Expect = 1e-68
 Identities = 135/196 (68%), Positives = 155/196 (79%), Gaps = 1/196 (0%)
 Frame = -3

Query: 604 GLIAVASSCKLLRKLQIVPSDPPYCP-LTEIGLIAVSSGCVMLESVLYFCRQMTNSALLT 428
           GL  VASSC  L++L++ PSDP     LTE GL+ VS+ C MLESVLYFCR+MTN AL+T
Sbjct: 8   GLAVVASSCNKLQELRVFPSDPFGAGFLTERGLVDVSASCPMLESVLYFCRRMTNEALIT 67

Query: 427 IANNCPNLTCFRLCITKPYTPDYITQEPLDAGFGAIVESCKDLRRLSISGLLTDRVFITI 248
           IA N PN TCFRLCI +P+TPDYIT+EPLDAGF AIVESC+ LRRLSISGLLTD VF +I
Sbjct: 68  IAKNRPNFTCFRLCILEPHTPDYITREPLDAGFSAIVESCRGLRRLSISGLLTDLVFKSI 127

Query: 247 GTSANRLEWLSVCCAGDGDAGLHYILSGCRKLRMLEIRKCPFGIKALLDNADKLKTMRCL 68
           G  A+RLE LS+  AG+ D GLHYILSGC+ L+ LEIR CPFG K LL NA KL+TMR L
Sbjct: 128 GAHADRLEMLSIAFAGNSDLGLHYILSGCKSLKKLEIRDCPFGDKPLLANAAKLETMRSL 187

Query: 67  WMSSCSVTLGECRLLA 20
           WMSSC +TLG CR LA
Sbjct: 188 WMSSCLLTLGACRQLA 203


>sp|Q0DKP3.2|TIR1A_ORYSJ RecName: Full=Transport inhibitor response 1-like protein
           Os05g0150500; Short=TIR1-like protein
           gi|166714348|gb|ABY87942.1| transport inhibitor response
           1 [Oryza sativa Indica Group]
           gi|218196104|gb|EEC78531.1| hypothetical protein
           OsI_18478 [Oryza sativa Indica Group]
          Length = 587

 Score =  265 bits (676), Expect = 1e-68
 Identities = 135/196 (68%), Positives = 155/196 (79%), Gaps = 1/196 (0%)
 Frame = -3

Query: 604 GLIAVASSCKLLRKLQIVPSDPPYCP-LTEIGLIAVSSGCVMLESVLYFCRQMTNSALLT 428
           GL  VASSC  L++L++ PSDP     LTE GL+ VS+ C MLESVLYFCR+MTN AL+T
Sbjct: 340 GLAVVASSCNKLQELRVFPSDPFGAGFLTERGLVDVSASCPMLESVLYFCRRMTNEALIT 399

Query: 427 IANNCPNLTCFRLCITKPYTPDYITQEPLDAGFGAIVESCKDLRRLSISGLLTDRVFITI 248
           IA N PN TCFRLCI +P+TPDYIT+EPLDAGF AIVESC+ LRRLSISGLLTD VF +I
Sbjct: 400 IAKNRPNFTCFRLCILEPHTPDYITREPLDAGFSAIVESCRGLRRLSISGLLTDLVFKSI 459

Query: 247 GTSANRLEWLSVCCAGDGDAGLHYILSGCRKLRMLEIRKCPFGIKALLDNADKLKTMRCL 68
           G  A+RLE LS+  AG+ D GLHYILSGC+ L+ LEIR CPFG K LL NA KL+TMR L
Sbjct: 460 GAHADRLEMLSIAFAGNSDLGLHYILSGCKSLKKLEIRDCPFGDKPLLANAAKLETMRSL 519

Query: 67  WMSSCSVTLGECRLLA 20
           WMSSC +TLG CR LA
Sbjct: 520 WMSSCLLTLGACRQLA 535


>gb|AAV32196.1| putative transport inhibitor response TIR1 [Oryza sativa Japonica
           Group] gi|222630220|gb|EEE62352.1| hypothetical protein
           OsJ_17141 [Oryza sativa Japonica Group]
          Length = 462

 Score =  265 bits (676), Expect = 1e-68
 Identities = 135/196 (68%), Positives = 155/196 (79%), Gaps = 1/196 (0%)
 Frame = -3

Query: 604 GLIAVASSCKLLRKLQIVPSDPPYCP-LTEIGLIAVSSGCVMLESVLYFCRQMTNSALLT 428
           GL  VASSC  L++L++ PSDP     LTE GL+ VS+ C MLESVLYFCR+MTN AL+T
Sbjct: 215 GLAVVASSCNKLQELRVFPSDPFGAGFLTERGLVDVSASCPMLESVLYFCRRMTNEALIT 274

Query: 427 IANNCPNLTCFRLCITKPYTPDYITQEPLDAGFGAIVESCKDLRRLSISGLLTDRVFITI 248
           IA N PN TCFRLCI +P+TPDYIT+EPLDAGF AIVESC+ LRRLSISGLLTD VF +I
Sbjct: 275 IAKNRPNFTCFRLCILEPHTPDYITREPLDAGFSAIVESCRGLRRLSISGLLTDLVFKSI 334

Query: 247 GTSANRLEWLSVCCAGDGDAGLHYILSGCRKLRMLEIRKCPFGIKALLDNADKLKTMRCL 68
           G  A+RLE LS+  AG+ D GLHYILSGC+ L+ LEIR CPFG K LL NA KL+TMR L
Sbjct: 335 GAHADRLEMLSIAFAGNSDLGLHYILSGCKSLKKLEIRDCPFGDKPLLANAAKLETMRSL 394

Query: 67  WMSSCSVTLGECRLLA 20
           WMSSC +TLG CR LA
Sbjct: 395 WMSSCLLTLGACRQLA 410


>ref|XP_006654054.1| PREDICTED: transport inhibitor response 1-like protein
           Os05g0150500-like [Oryza brachyantha]
          Length = 462

 Score =  264 bits (675), Expect = 1e-68
 Identities = 135/196 (68%), Positives = 155/196 (79%), Gaps = 1/196 (0%)
 Frame = -3

Query: 604 GLIAVASSCKLLRKLQIVPSDPPYCP-LTEIGLIAVSSGCVMLESVLYFCRQMTNSALLT 428
           GL  VASSC  L++L++ PSDP     LTE GL+ VS+ C MLESVLYFCR+MTN AL+T
Sbjct: 215 GLAIVASSCNKLQELRVFPSDPFGAGFLTERGLVDVSASCPMLESVLYFCRRMTNEALIT 274

Query: 427 IANNCPNLTCFRLCITKPYTPDYITQEPLDAGFGAIVESCKDLRRLSISGLLTDRVFITI 248
           IA N PN TCFRLCI +P+TPDYIT+EPLDAGF AIVESC+ LRRLSISGLLTD VF +I
Sbjct: 275 IAKNRPNFTCFRLCILEPHTPDYITREPLDAGFSAIVESCRGLRRLSISGLLTDLVFKSI 334

Query: 247 GTSANRLEWLSVCCAGDGDAGLHYILSGCRKLRMLEIRKCPFGIKALLDNADKLKTMRCL 68
           G  A+RLE LS+  AG+ D GLHYILSGC+ L+ LEIR CPFG K LL NA KL+TMR L
Sbjct: 335 GAHADRLEMLSIAFAGNSDLGLHYILSGCKSLKKLEIRDCPFGDKPLLANAAKLETMRSL 394

Query: 67  WMSSCSVTLGECRLLA 20
           WMSSC +TLG CR LA
Sbjct: 395 WMSSCLLTLGACRQLA 410


>ref|XP_004309692.1| PREDICTED: protein TRANSPORT INHIBITOR RESPONSE 1-like [Fragaria
           vesca subsp. vesca]
          Length = 584

 Score =  264 bits (675), Expect = 1e-68
 Identities = 134/198 (67%), Positives = 154/198 (77%), Gaps = 4/198 (2%)
 Frame = -3

Query: 604 GLIAVASSCKLLRKLQIVPSDP----PYCPLTEIGLIAVSSGCVMLESVLYFCRQMTNSA 437
           GL A+A+SCK LR+L++ PSDP        LTE GLI+VS GC  L+SVLYFCRQM+N A
Sbjct: 328 GLDALAASCKDLRELRVFPSDPYVLEANVSLTEQGLISVSEGCPKLQSVLYFCRQMSNDA 387

Query: 436 LLTIANNCPNLTCFRLCITKPYTPDYITQEPLDAGFGAIVESCKDLRRLSISGLLTDRVF 257
           L+TIA N PN TCFRLCI +P TPDY+T+EPLD GFGAIVE CKDLRRLS+SGLLTDR F
Sbjct: 388 LITIARNQPNFTCFRLCIIEPRTPDYLTREPLDVGFGAIVERCKDLRRLSVSGLLTDRAF 447

Query: 256 ITIGTSANRLEWLSVCCAGDGDAGLHYILSGCRKLRMLEIRKCPFGIKALLDNADKLKTM 77
             IGT   +LE LSV  AG+ D GLH++LSGC  LR LEIR CPFG KALL NA KL+TM
Sbjct: 448 EYIGTYGKKLEMLSVAFAGESDLGLHHVLSGCDNLRKLEIRDCPFGDKALLANAAKLETM 507

Query: 76  RCLWMSSCSVTLGECRLL 23
           R LWMSSCSV+ G C+LL
Sbjct: 508 RSLWMSSCSVSYGACKLL 525


>gb|EXC34697.1| Protein TRANSPORT INHIBITOR RESPONSE 1 [Morus notabilis]
          Length = 582

 Score =  264 bits (674), Expect = 2e-68
 Identities = 134/198 (67%), Positives = 153/198 (77%), Gaps = 4/198 (2%)
 Frame = -3

Query: 604 GLIAVASSCKLLRKLQIVPSDP----PYCPLTEIGLIAVSSGCVMLESVLYFCRQMTNSA 437
           GL A+A+SCK LR+L++ PSDP    P   LTE GL++VS GC  L SVLYFCRQM+N+A
Sbjct: 325 GLEALAASCKDLRELRVFPSDPFVAEPNVSLTEQGLVSVSGGCPKLHSVLYFCRQMSNAA 384

Query: 436 LLTIANNCPNLTCFRLCITKPYTPDYITQEPLDAGFGAIVESCKDLRRLSISGLLTDRVF 257
           L TIA N PN TCFRLCI +P TPDY+T  PLDAGFGAIVE CKDLRRLS+SGLLTDR F
Sbjct: 385 LTTIARNRPNFTCFRLCIIEPRTPDYLTLGPLDAGFGAIVEHCKDLRRLSVSGLLTDRAF 444

Query: 256 ITIGTSANRLEWLSVCCAGDGDAGLHYILSGCRKLRMLEIRKCPFGIKALLDNADKLKTM 77
             IGT A +LE LS+  AGD D GLH++LSGC  LR LEIR CPFG KALL NA KL+TM
Sbjct: 445 EYIGTYAKKLEMLSLAFAGDSDLGLHHVLSGCENLRKLEIRDCPFGDKALLANAAKLETM 504

Query: 76  RCLWMSSCSVTLGECRLL 23
           R LWMSSC V+ G C+LL
Sbjct: 505 RSLWMSSCMVSYGACKLL 522


>gb|AFW82629.1| hypothetical protein ZEAMMB73_053611 [Zea mays]
          Length = 590

 Score =  263 bits (672), Expect = 3e-68
 Identities = 133/199 (66%), Positives = 154/199 (77%), Gaps = 4/199 (2%)
 Frame = -3

Query: 604 GLIAVASSCKLLRKLQIVPSDP----PYCPLTEIGLIAVSSGCVMLESVLYFCRQMTNSA 437
           GL  VASSC  L++L++ PS P        LTE GL+ VS+ C MLESVLYFCR+MTN A
Sbjct: 340 GLAVVASSCNKLQELRVFPSAPFEAAEQVSLTERGLVDVSASCPMLESVLYFCRRMTNEA 399

Query: 436 LLTIANNCPNLTCFRLCITKPYTPDYITQEPLDAGFGAIVESCKDLRRLSISGLLTDRVF 257
           L+TIA N PN TCFRLCI +P+TPDYIT +PLDAGF AIVESCK LRRLS+SGLLTD VF
Sbjct: 400 LITIAKNRPNFTCFRLCIIEPHTPDYITHQPLDAGFSAIVESCKGLRRLSVSGLLTDSVF 459

Query: 256 ITIGTSANRLEWLSVCCAGDGDAGLHYILSGCRKLRMLEIRKCPFGIKALLDNADKLKTM 77
            +IG  A+RLE LS+  AG+ D GLHYILSGC+ L+ LEIR CPFG K LL NA KL+TM
Sbjct: 460 KSIGAHADRLEMLSIAFAGNSDLGLHYILSGCKSLKKLEIRDCPFGDKPLLANAAKLETM 519

Query: 76  RCLWMSSCSVTLGECRLLA 20
           R LWMS+CS+TLG CR LA
Sbjct: 520 RSLWMSTCSMTLGACRQLA 538


>gb|ESW16555.1| hypothetical protein PHAVU_007G166200g [Phaseolus vulgaris]
          Length = 585

 Score =  262 bits (670), Expect = 5e-68
 Identities = 133/198 (67%), Positives = 154/198 (77%), Gaps = 4/198 (2%)
 Frame = -3

Query: 604 GLIAVASSCKLLRKLQIVPSDP----PYCPLTEIGLIAVSSGCVMLESVLYFCRQMTNSA 437
           GL  +A+SCK LR+L++ PSDP    P   LTE GL++VS GC  L+SVLYFCRQM+N+A
Sbjct: 329 GLEVIAASCKDLRELRVFPSDPFGLEPNVALTEQGLVSVSEGCSKLQSVLYFCRQMSNAA 388

Query: 436 LLTIANNCPNLTCFRLCITKPYTPDYITQEPLDAGFGAIVESCKDLRRLSISGLLTDRVF 257
           LLTIA N PN+T FRLCI +P  PDY+T +PLDAGFGAIVE CKDLRRLS+SGLLTDRVF
Sbjct: 389 LLTIARNRPNMTRFRLCIIEPQVPDYLTHDPLDAGFGAIVEHCKDLRRLSLSGLLTDRVF 448

Query: 256 ITIGTSANRLEWLSVCCAGDGDAGLHYILSGCRKLRMLEIRKCPFGIKALLDNADKLKTM 77
             IGT   +LE LSV  AGD D GLH++LSGC  LR LEIR CPFG KALL NA KL+TM
Sbjct: 449 EYIGTYGKKLEMLSVAFAGDSDLGLHHVLSGCDNLRKLEIRDCPFGDKALLANAAKLETM 508

Query: 76  RCLWMSSCSVTLGECRLL 23
           R LWMSSC V+ G C+LL
Sbjct: 509 RSLWMSSCLVSYGACKLL 526


>gb|AFS44506.1| auxin receptor 1, partial [Fragaria x ananassa]
          Length = 579

 Score =  262 bits (670), Expect = 5e-68
 Identities = 133/198 (67%), Positives = 153/198 (77%), Gaps = 4/198 (2%)
 Frame = -3

Query: 604 GLIAVASSCKLLRKLQIVPSDP----PYCPLTEIGLIAVSSGCVMLESVLYFCRQMTNSA 437
           GL A+A+SCK LR+L++ PSDP        LTE GLI+VS GC  L+SVLYFCRQM+N A
Sbjct: 325 GLDALAASCKDLRELRVFPSDPYVLEANVSLTEQGLISVSEGCPKLQSVLYFCRQMSNDA 384

Query: 436 LLTIANNCPNLTCFRLCITKPYTPDYITQEPLDAGFGAIVESCKDLRRLSISGLLTDRVF 257
           L+TIA N PN TCFRLCI +P TPDY+T+EPLD GFGAIVE CKDLRRLS+SGLLTDR F
Sbjct: 385 LITIARNQPNFTCFRLCIIEPRTPDYLTREPLDVGFGAIVERCKDLRRLSVSGLLTDRAF 444

Query: 256 ITIGTSANRLEWLSVCCAGDGDAGLHYILSGCRKLRMLEIRKCPFGIKALLDNADKLKTM 77
             IGT   +LE LSV  AG+ D GLH++LSGC  LR LEIR CPFG KALL NA KL+TM
Sbjct: 445 EYIGTYGKKLEMLSVAFAGESDLGLHHVLSGCDNLRKLEIRDCPFGDKALLANAAKLETM 504

Query: 76  RCLWMSSCSVTLGECRLL 23
           R LWMS CSV+ G C+LL
Sbjct: 505 RSLWMSPCSVSYGACKLL 522


>ref|NP_567135.1| protein TRANSPORT INHIBITOR RESPONSE 1 [Arabidopsis thaliana]
           gi|68053009|sp|Q570C0.2|TIR1_ARATH RecName: Full=Protein
           TRANSPORT INHIBITOR RESPONSE 1; AltName: Full=Weak
           ethylene-insensitive protein 1 gi|146387658|pdb|2P1M|B
           Chain B, Tir1-ask1 Complex Structure
           gi|146387660|pdb|2P1N|B Chain B, Mechanism Of Auxin
           Perception By The Tir1 Ubiqutin Ligase
           gi|146387663|pdb|2P1N|E Chain E, Mechanism Of Auxin
           Perception By The Tir1 Ubiqutin Ligase
           gi|146387666|pdb|2P1O|B Chain B, Mechanism Of Auxin
           Perception By The Tir1 Ubiquitin Ligase
           gi|146387669|pdb|2P1P|B Chain B, Mechanism Of Auxin
           Perception By The Tir1 Ubiquitin Ligase
           gi|146387671|pdb|2P1Q|B Chain B, Mechanism Of Auxin
           Perception By The Tir1 Ubiquitin Ligase
           gi|185177934|pdb|3C6N|B Chain B, Small Molecule Agonists
           And Antagonists Of F-Box Protein- Substrate Interactions
           In Auxin Perception And Signaling
           gi|185177936|pdb|3C6O|B Chain B, Small Molecule Agonists
           And Antagonists Of F-Box Protein-Substrate Interactions
           In Auxin Perception And Signaling
           gi|185177938|pdb|3C6P|B Chain B, Small Molecule Agonists
           And Antagonists Of F-Box Protein- Substrate Interactions
           In Auxin Perception And Signaling
           gi|2352492|gb|AAB69175.1| transport inhibitor response 1
           [Arabidopsis thaliana] gi|2352494|gb|AAB69176.1|
           transport inhibitor response 1 [Arabidopsis thaliana]
           gi|7573427|emb|CAB87743.1| transport inhibitor response
           1 (TIR1) [Arabidopsis thaliana]
           gi|25054937|gb|AAN71945.1| putative transport inhibitor
           response TIR1, AtFBL1 protein [Arabidopsis thaliana]
           gi|332646898|gb|AEE80419.1| protein TRANSPORT INHIBITOR
           RESPONSE 1 [Arabidopsis thaliana]
          Length = 594

 Score =  262 bits (669), Expect = 6e-68
 Identities = 132/198 (66%), Positives = 155/198 (78%), Gaps = 4/198 (2%)
 Frame = -3

Query: 604 GLIAVASSCKLLRKLQIVPSDP----PYCPLTEIGLIAVSSGCVMLESVLYFCRQMTNSA 437
           GL  +AS+CK LR+L++ PS+P    P   LTE GL++VS GC  LESVLYFCRQMTN+A
Sbjct: 329 GLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAA 388

Query: 436 LLTIANNCPNLTCFRLCITKPYTPDYITQEPLDAGFGAIVESCKDLRRLSISGLLTDRVF 257
           L+TIA N PN+T FRLCI +P  PDY+T EPLD GFGAIVE CKDLRRLS+SGLLTD+VF
Sbjct: 389 LITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSGLLTDKVF 448

Query: 256 ITIGTSANRLEWLSVCCAGDGDAGLHYILSGCRKLRMLEIRKCPFGIKALLDNADKLKTM 77
             IGT A ++E LSV  AGD D G+H++LSGC  LR LEIR CPFG KALL NA KL+TM
Sbjct: 449 EYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETM 508

Query: 76  RCLWMSSCSVTLGECRLL 23
           R LWMSSCSV+ G C+LL
Sbjct: 509 RSLWMSSCSVSFGACKLL 526


>ref|XP_006352806.1| PREDICTED: protein TRANSPORT INHIBITOR RESPONSE 1-like [Solanum
           tuberosum]
          Length = 580

 Score =  262 bits (669), Expect = 6e-68
 Identities = 131/199 (65%), Positives = 155/199 (77%), Gaps = 4/199 (2%)
 Frame = -3

Query: 604 GLIAVASSCKLLRKLQIVPSDP----PYCPLTEIGLIAVSSGCVMLESVLYFCRQMTNSA 437
           GL A+A +CK L++L++ PS+P    P   LTE GL+AVS GC  L++VLYFCRQM N+A
Sbjct: 327 GLQALAGTCKDLQELRVFPSNPFDPEPNVSLTEQGLVAVSDGCPKLQTVLYFCRQMRNAA 386

Query: 436 LLTIANNCPNLTCFRLCITKPYTPDYITQEPLDAGFGAIVESCKDLRRLSISGLLTDRVF 257
           L+TIA N PN+ CFRLCI +P TPDY+T EPLDAGFGAIVE CK+LRRLS+SGLLTDRVF
Sbjct: 387 LITIARNSPNMVCFRLCILEPRTPDYLTLEPLDAGFGAIVEQCKELRRLSLSGLLTDRVF 446

Query: 256 ITIGTSANRLEWLSVCCAGDGDAGLHYILSGCRKLRMLEIRKCPFGIKALLDNADKLKTM 77
             IGT A +LE LSV  AGD D GLH++LSGC  LR LEIR CPF   ALL NA KL+TM
Sbjct: 447 EYIGTHAKKLEMLSVAFAGDSDMGLHHVLSGCESLRKLEIRDCPFSDDALLANAAKLETM 506

Query: 76  RCLWMSSCSVTLGECRLLA 20
           R LWMSSCSV+ G C+LL+
Sbjct: 507 RSLWMSSCSVSFGACKLLS 525


>ref|XP_003568922.1| PREDICTED: transport inhibitor response 1-like protein
           Os05g0150500-like [Brachypodium distachyon]
          Length = 590

 Score =  262 bits (669), Expect = 6e-68
 Identities = 134/198 (67%), Positives = 154/198 (77%), Gaps = 3/198 (1%)
 Frame = -3

Query: 604 GLIAVASSCKLLRKLQIVPSDP---PYCPLTEIGLIAVSSGCVMLESVLYFCRQMTNSAL 434
           GL  VAS+C  L++L++ PSDP       LTE GL+ VS+ C MLESVLYFCR+MTN AL
Sbjct: 341 GLAVVASTCSKLQELRVFPSDPFGAGQVLLTERGLVDVSASCPMLESVLYFCRRMTNEAL 400

Query: 433 LTIANNCPNLTCFRLCITKPYTPDYITQEPLDAGFGAIVESCKDLRRLSISGLLTDRVFI 254
           +TIA N PN TCFRLCI +P TPDYITQ+ LDAGF AIVESCK LRRLS+SGLLTD VF 
Sbjct: 401 ITIAKNRPNFTCFRLCILEPRTPDYITQQSLDAGFSAIVESCKGLRRLSVSGLLTDLVFK 460

Query: 253 TIGTSANRLEWLSVCCAGDGDAGLHYILSGCRKLRMLEIRKCPFGIKALLDNADKLKTMR 74
           +IG  A+RLE LS+  AG+ D GLHYILSGC+ L+ LEIR CPFG K LL NA KL+TMR
Sbjct: 461 SIGEHADRLEMLSIAFAGNSDLGLHYILSGCKSLKKLEIRDCPFGNKPLLANAAKLETMR 520

Query: 73  CLWMSSCSVTLGECRLLA 20
            LWMSSCS+TLG CR LA
Sbjct: 521 SLWMSSCSLTLGACRQLA 538


>ref|XP_006402320.1| hypothetical protein EUTSA_v10005852mg [Eutrema salsugineum]
           gi|557103419|gb|ESQ43773.1| hypothetical protein
           EUTSA_v10005852mg [Eutrema salsugineum]
          Length = 594

 Score =  261 bits (668), Expect = 8e-68
 Identities = 132/198 (66%), Positives = 155/198 (78%), Gaps = 4/198 (2%)
 Frame = -3

Query: 604 GLIAVASSCKLLRKLQIVPSDP----PYCPLTEIGLIAVSSGCVMLESVLYFCRQMTNSA 437
           GL  +AS+CK LR+L++ PS+P    P   LTE GL++VS GC  LESVLYFCRQMTN+A
Sbjct: 329 GLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSVGCPKLESVLYFCRQMTNAA 388

Query: 436 LLTIANNCPNLTCFRLCITKPYTPDYITQEPLDAGFGAIVESCKDLRRLSISGLLTDRVF 257
           L+TIA N PN+T FRLCI +P  PDY+T EPLD GFGAIVE CKDLRRLS+SGLLTD+VF
Sbjct: 389 LVTIARNRPNMTRFRLCIIEPKAPDYLTLEPLDVGFGAIVEHCKDLRRLSLSGLLTDKVF 448

Query: 256 ITIGTSANRLEWLSVCCAGDGDAGLHYILSGCRKLRMLEIRKCPFGIKALLDNADKLKTM 77
             IGT A ++E LSV  AGD D G+H++LSGC  LR LEIR CPFG KALL NA KL+TM
Sbjct: 449 EYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETM 508

Query: 76  RCLWMSSCSVTLGECRLL 23
           R LWMSSCSV+ G C+LL
Sbjct: 509 RSLWMSSCSVSFGACKLL 526


>ref|XP_006290792.1| hypothetical protein CARUB_v10016894mg [Capsella rubella]
           gi|482559499|gb|EOA23690.1| hypothetical protein
           CARUB_v10016894mg [Capsella rubella]
          Length = 594

 Score =  261 bits (666), Expect = 1e-67
 Identities = 132/198 (66%), Positives = 154/198 (77%), Gaps = 4/198 (2%)
 Frame = -3

Query: 604 GLIAVASSCKLLRKLQIVPSDP----PYCPLTEIGLIAVSSGCVMLESVLYFCRQMTNSA 437
           GL  +AS+CK LR+L++ PS+P    P   LTE GL+ VS GC  LESVLYFCRQMTN+A
Sbjct: 329 GLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVYVSMGCPKLESVLYFCRQMTNAA 388

Query: 436 LLTIANNCPNLTCFRLCITKPYTPDYITQEPLDAGFGAIVESCKDLRRLSISGLLTDRVF 257
           L+TIA N PN+T FRLCI +P  PDY+T EPLD GFGAIVE CKDLRRLS+SGLLTD+VF
Sbjct: 389 LVTIARNRPNMTRFRLCIIEPKAPDYLTLEPLDVGFGAIVEHCKDLRRLSLSGLLTDKVF 448

Query: 256 ITIGTSANRLEWLSVCCAGDGDAGLHYILSGCRKLRMLEIRKCPFGIKALLDNADKLKTM 77
             IGT A ++E LSV  AGD D G+H++LSGC  LR LEIR CPFG KALL NA KL+TM
Sbjct: 449 EYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETM 508

Query: 76  RCLWMSSCSVTLGECRLL 23
           R LWMSSCSV+ G C+LL
Sbjct: 509 RSLWMSSCSVSFGACKLL 526


>ref|XP_006290791.1| hypothetical protein CARUB_v10016894mg [Capsella rubella]
           gi|482559498|gb|EOA23689.1| hypothetical protein
           CARUB_v10016894mg [Capsella rubella]
          Length = 437

 Score =  261 bits (666), Expect = 1e-67
 Identities = 132/198 (66%), Positives = 154/198 (77%), Gaps = 4/198 (2%)
 Frame = -3

Query: 604 GLIAVASSCKLLRKLQIVPSDP----PYCPLTEIGLIAVSSGCVMLESVLYFCRQMTNSA 437
           GL  +AS+CK LR+L++ PS+P    P   LTE GL+ VS GC  LESVLYFCRQMTN+A
Sbjct: 172 GLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVYVSMGCPKLESVLYFCRQMTNAA 231

Query: 436 LLTIANNCPNLTCFRLCITKPYTPDYITQEPLDAGFGAIVESCKDLRRLSISGLLTDRVF 257
           L+TIA N PN+T FRLCI +P  PDY+T EPLD GFGAIVE CKDLRRLS+SGLLTD+VF
Sbjct: 232 LVTIARNRPNMTRFRLCIIEPKAPDYLTLEPLDVGFGAIVEHCKDLRRLSLSGLLTDKVF 291

Query: 256 ITIGTSANRLEWLSVCCAGDGDAGLHYILSGCRKLRMLEIRKCPFGIKALLDNADKLKTM 77
             IGT A ++E LSV  AGD D G+H++LSGC  LR LEIR CPFG KALL NA KL+TM
Sbjct: 292 EYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETM 351

Query: 76  RCLWMSSCSVTLGECRLL 23
           R LWMSSCSV+ G C+LL
Sbjct: 352 RSLWMSSCSVSFGACKLL 369


>gb|EOX94947.1| F-box/RNI-like superfamily protein isoform 1 [Theobroma cacao]
           gi|508703052|gb|EOX94948.1| F-box/RNI-like superfamily
           protein isoform 1 [Theobroma cacao]
          Length = 587

 Score =  260 bits (664), Expect = 2e-67
 Identities = 135/198 (68%), Positives = 152/198 (76%), Gaps = 4/198 (2%)
 Frame = -3

Query: 604 GLIAVASSCKLLRKLQIVPSDP----PYCPLTEIGLIAVSSGCVMLESVLYFCRQMTNSA 437
           GL A+ASSCK L++L++ PSDP    P   LTE GL+AVS GC  L+SVLYFC QMTNSA
Sbjct: 330 GLEALASSCKDLQELRVFPSDPFGAEPNVSLTEQGLVAVSLGCPKLQSVLYFCHQMTNSA 389

Query: 436 LLTIANNCPNLTCFRLCITKPYTPDYITQEPLDAGFGAIVESCKDLRRLSISGLLTDRVF 257
           L+ IA N PNLT FRLCI  P  PDY+T EPLD GFGAIV+ CKDLRRLS+SGLLTDRVF
Sbjct: 390 LVNIAQNRPNLTRFRLCIIAPRKPDYVTLEPLDVGFGAIVQHCKDLRRLSLSGLLTDRVF 449

Query: 256 ITIGTSANRLEWLSVCCAGDGDAGLHYILSGCRKLRMLEIRKCPFGIKALLDNADKLKTM 77
             IGT A +LE LSV  AGD D GLH++LSGC  LR LEIR C FG KALL NA KL+TM
Sbjct: 450 EYIGTYAKKLEMLSVAFAGDSDLGLHHVLSGCESLRKLEIRDCSFGDKALLANAAKLETM 509

Query: 76  RCLWMSSCSVTLGECRLL 23
           R LWMSSCSV+ G C+LL
Sbjct: 510 RSLWMSSCSVSFGACKLL 527


>ref|XP_002440601.1| hypothetical protein SORBIDRAFT_09g003870 [Sorghum bicolor]
           gi|241945886|gb|EES19031.1| hypothetical protein
           SORBIDRAFT_09g003870 [Sorghum bicolor]
          Length = 591

 Score =  260 bits (664), Expect = 2e-67
 Identities = 131/199 (65%), Positives = 153/199 (76%), Gaps = 4/199 (2%)
 Frame = -3

Query: 604 GLIAVASSCKLLRKLQIVPSDP----PYCPLTEIGLIAVSSGCVMLESVLYFCRQMTNSA 437
           GL  VASSC  L++L++ PS P        LTE GL+ VS+ C MLESVLYFCR+MTN A
Sbjct: 341 GLAVVASSCNKLQELRVFPSAPFDAAEQVSLTERGLVDVSASCPMLESVLYFCRRMTNEA 400

Query: 436 LLTIANNCPNLTCFRLCITKPYTPDYITQEPLDAGFGAIVESCKDLRRLSISGLLTDRVF 257
           L+TIA N PN TCFRLCI +P+TPDY T +PLDAGF AIVESCK LRRLS+SGLLTD +F
Sbjct: 401 LITIAKNRPNFTCFRLCIIEPHTPDYTTHQPLDAGFSAIVESCKGLRRLSVSGLLTDSLF 460

Query: 256 ITIGTSANRLEWLSVCCAGDGDAGLHYILSGCRKLRMLEIRKCPFGIKALLDNADKLKTM 77
            +IG  A+RLE LS+  AG+ D GLHYILSGC+ L+ LEIR CPFG K LL NA KL+TM
Sbjct: 461 KSIGAHADRLEMLSIAFAGNSDLGLHYILSGCKSLKKLEIRDCPFGDKPLLANAAKLETM 520

Query: 76  RCLWMSSCSVTLGECRLLA 20
           R LWMS+CS+TLG CR LA
Sbjct: 521 RSLWMSTCSLTLGACRQLA 539


>gb|ADV56682.1| F-box/leucine rich repeat protein [Phaseolus vulgaris]
           gi|561036522|gb|ESW35052.1| hypothetical protein
           PHAVU_001G202600g [Phaseolus vulgaris]
          Length = 591

 Score =  259 bits (663), Expect = 3e-67
 Identities = 133/198 (67%), Positives = 155/198 (78%), Gaps = 4/198 (2%)
 Frame = -3

Query: 604 GLIAVASSCKLLRKLQIVPSDP----PYCPLTEIGLIAVSSGCVMLESVLYFCRQMTNSA 437
           GL  +A+SCK LR+L++ PSDP    P   LTE GL++VS GC  L+SVLYFCRQM+N+A
Sbjct: 330 GLYNLAASCKDLRELRVFPSDPFGLEPNVALTEKGLVSVSEGCPRLQSVLYFCRQMSNAA 389

Query: 436 LLTIANNCPNLTCFRLCITKPYTPDYITQEPLDAGFGAIVESCKDLRRLSISGLLTDRVF 257
           L TIA N PNLT FRLCI +P TPDY+T EPLD+GFGAIVE CKDL+RLS+SGLLTDRVF
Sbjct: 390 LHTIALNRPNLTRFRLCIIEPKTPDYLTHEPLDSGFGAIVEHCKDLQRLSLSGLLTDRVF 449

Query: 256 ITIGTSANRLEWLSVCCAGDGDAGLHYILSGCRKLRMLEIRKCPFGIKALLDNADKLKTM 77
             IGT   +LE LSV  AGD D GLH++LSGC  LR LEIR CPFG KALL NA KL+TM
Sbjct: 450 EYIGTYGKKLEMLSVAFAGDSDLGLHHVLSGCDNLRKLEIRDCPFGDKALLANAAKLETM 509

Query: 76  RCLWMSSCSVTLGECRLL 23
           R LWMSSCSV+ G C++L
Sbjct: 510 RSLWMSSCSVSYGACKVL 527


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