BLASTX nr result
ID: Zingiber25_contig00028717
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00028717
(341 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006409305.1| hypothetical protein EUTSA_v10023141mg [Eutr... 66 4e-09
ref|XP_006298646.1| hypothetical protein CARUB_v10014735mg [Caps... 66 4e-09
gb|AAM63811.1| putative RING zinc finger protein [Arabidopsis th... 66 5e-09
ref|NP_177767.1| RING-H2 finger protein ATL8 [Arabidopsis thalia... 66 5e-09
ref|XP_002274304.1| PREDICTED: RING-H2 finger protein ATL80 [Vit... 66 5e-09
emb|CAN59779.1| hypothetical protein VITISV_024654 [Vitis vinifera] 66 5e-09
ref|XP_004232585.1| PREDICTED: RING-H2 finger protein ATL80-like... 65 7e-09
gb|EXB56281.1| RING-H2 finger protein ATL80 [Morus notabilis] 65 9e-09
ref|XP_004966533.1| PREDICTED: RING-H2 finger protein ATL45-like... 65 9e-09
dbj|BAK02775.1| predicted protein [Hordeum vulgare subsp. vulgare] 64 2e-08
ref|NP_179337.1| RING-H2 finger protein ATL44 [Arabidopsis thali... 64 3e-08
dbj|BAK02242.1| predicted protein [Hordeum vulgare subsp. vulgare] 64 3e-08
ref|XP_002886113.1| ring-H2 finger A3A [Arabidopsis lyrata subsp... 64 3e-08
ref|NP_001047768.1| Os02g0686100 [Oryza sativa Japonica Group] g... 63 4e-08
ref|XP_002887637.1| hypothetical protein ARALYDRAFT_316562 [Arab... 63 4e-08
ref|XP_006435418.1| hypothetical protein CICLE_v10004041mg [Citr... 63 5e-08
ref|XP_006302871.1| hypothetical protein CARUB_v10021002mg [Caps... 62 6e-08
gb|AFK44145.1| unknown [Medicago truncatula] 62 6e-08
ref|XP_003612411.1| Ring finger protein [Medicago truncatula] gi... 62 6e-08
gb|EMS54362.1| RING-H2 finger protein ATL80 [Triticum urartu] 62 8e-08
>ref|XP_006409305.1| hypothetical protein EUTSA_v10023141mg [Eutrema salsugineum]
gi|557110467|gb|ESQ50758.1| hypothetical protein
EUTSA_v10023141mg [Eutrema salsugineum]
Length = 185
Score = 66.2 bits (160), Expect = 4e-09
Identities = 41/98 (41%), Positives = 55/98 (56%), Gaps = 2/98 (2%)
Frame = +1
Query: 52 MRSPARFLLSSQ--PAQEAERMDAALVFHSDVILTLAVLLCAFICVLGLGLVARCAWLRR 225
M P+RFL +++ P Q +E+M AA SD+++ L+ LLCA ICV GL V RCAWLRR
Sbjct: 1 MTRPSRFLETAETPPPQPSEQMLAA---ESDMVVILSALLCALICVAGLAAVLRCAWLRR 57
Query: 226 SFNASDSSYDXXXXXXXXXXXXXGIKKKTLRALPTVSF 339
DS G+KKK L++LP +F
Sbjct: 58 FTTGGDS-----------PSPNKGLKKKVLQSLPRSTF 84
>ref|XP_006298646.1| hypothetical protein CARUB_v10014735mg [Capsella rubella]
gi|482567355|gb|EOA31544.1| hypothetical protein
CARUB_v10014735mg [Capsella rubella]
Length = 187
Score = 66.2 bits (160), Expect = 4e-09
Identities = 41/97 (42%), Positives = 53/97 (54%), Gaps = 1/97 (1%)
Frame = +1
Query: 52 MRSPARFL-LSSQPAQEAERMDAALVFHSDVILTLAVLLCAFICVLGLGLVARCAWLRRS 228
M P+R L ++ P Q +E M AA SD+++ L+ LLCA ICV GL V RCAWLRR
Sbjct: 1 MTRPSRLLETAAPPPQPSEEMIAA---ESDMVVILSALLCALICVAGLAAVVRCAWLRRF 57
Query: 229 FNASDSSYDXXXXXXXXXXXXXGIKKKTLRALPTVSF 339
DSS G+KKK L++LP +F
Sbjct: 58 TGGGDSS---------SPSPNKGLKKKALQSLPRSTF 85
>gb|AAM63811.1| putative RING zinc finger protein [Arabidopsis thaliana]
Length = 186
Score = 65.9 bits (159), Expect = 5e-09
Identities = 37/87 (42%), Positives = 52/87 (59%), Gaps = 2/87 (2%)
Frame = +1
Query: 85 QPAQEAERMDAALVFHSDVILTLAVLLCAFICVLGLGLVARCAWLRR--SFNASDSSYDX 258
Q A +A+ F+SD++L LAVLLCA C++GL V+RCAWLRR S N SD ++
Sbjct: 10 QEANSTSPAEASPPFNSDLVLILAVLLCALTCIIGLIAVSRCAWLRRIASRNRSDQTH-- 67
Query: 259 XXXXXXXXXXXXGIKKKTLRALPTVSF 339
G+KKK LR+LP +++
Sbjct: 68 ---PPPVAAANKGLKKKVLRSLPKLTY 91
>ref|NP_177767.1| RING-H2 finger protein ATL8 [Arabidopsis thaliana]
gi|68565205|sp|Q8LC69.2|ATL8_ARATH RecName: Full=RING-H2
finger protein ATL8 gi|6554478|gb|AAF16660.1|AC012394_9
putative RING zinc finger protein; 36546-35989
[Arabidopsis thaliana]
gi|12323975|gb|AAG51946.1|AC015450_7 putative RING zinc
finger protein; 5217-5774 [Arabidopsis thaliana]
gi|26452794|dbj|BAC43477.1| putative RING finger protein
[Arabidopsis thaliana] gi|28973309|gb|AAO63979.1|
putative RING zinc finger protein [Arabidopsis thaliana]
gi|332197717|gb|AEE35838.1| RING-H2 finger protein ATL8
[Arabidopsis thaliana]
Length = 185
Score = 65.9 bits (159), Expect = 5e-09
Identities = 37/87 (42%), Positives = 52/87 (59%), Gaps = 2/87 (2%)
Frame = +1
Query: 85 QPAQEAERMDAALVFHSDVILTLAVLLCAFICVLGLGLVARCAWLRR--SFNASDSSYDX 258
Q A +A+ F+SD++L LAVLLCA C++GL V+RCAWLRR S N SD ++
Sbjct: 10 QEANSTSPAEASPPFNSDLVLILAVLLCALTCIIGLIAVSRCAWLRRIASRNRSDQTH-- 67
Query: 259 XXXXXXXXXXXXGIKKKTLRALPTVSF 339
G+KKK LR+LP +++
Sbjct: 68 ---PPPVAAANKGLKKKVLRSLPKLTY 91
>ref|XP_002274304.1| PREDICTED: RING-H2 finger protein ATL80 [Vitis vinifera]
Length = 184
Score = 65.9 bits (159), Expect = 5e-09
Identities = 41/96 (42%), Positives = 53/96 (55%)
Frame = +1
Query: 52 MRSPARFLLSSQPAQEAERMDAALVFHSDVILTLAVLLCAFICVLGLGLVARCAWLRRSF 231
M P+RFL + A + AA+ SD ++ LA LLCA ICVLGL VARCAWLRR
Sbjct: 1 MTHPSRFLGGVNSSATASQESAAV--DSDFVVILAALLCALICVLGLVAVARCAWLRRIS 58
Query: 232 NASDSSYDXXXXXXXXXXXXXGIKKKTLRALPTVSF 339
A+ + G+KKK LR+LP V++
Sbjct: 59 GAA----NLPGGSAPQTPANKGLKKKILRSLPKVTY 90
>emb|CAN59779.1| hypothetical protein VITISV_024654 [Vitis vinifera]
Length = 312
Score = 65.9 bits (159), Expect = 5e-09
Identities = 41/96 (42%), Positives = 53/96 (55%)
Frame = +1
Query: 52 MRSPARFLLSSQPAQEAERMDAALVFHSDVILTLAVLLCAFICVLGLGLVARCAWLRRSF 231
M P+RFL + A + AA+ SD ++ LA LLCA ICVLGL VARCAWLRR
Sbjct: 1 MTHPSRFLGGVNSSATASQESAAV--DSDFVVILAALLCALICVLGLVAVARCAWLRRIS 58
Query: 232 NASDSSYDXXXXXXXXXXXXXGIKKKTLRALPTVSF 339
A+ + G+KKK LR+LP V++
Sbjct: 59 GAA----NLPGGSAPQTPANKGLKKKILRSLPKVTY 90
>ref|XP_004232585.1| PREDICTED: RING-H2 finger protein ATL80-like [Solanum lycopersicum]
Length = 193
Score = 65.5 bits (158), Expect = 7e-09
Identities = 38/97 (39%), Positives = 52/97 (53%), Gaps = 1/97 (1%)
Frame = +1
Query: 52 MRSPARFLLSSQPAQE-AERMDAALVFHSDVILTLAVLLCAFICVLGLGLVARCAWLRRS 228
M P+RFLLS+ + A + + SD ++ LA LLCA ICV+GL VARCAWLRR
Sbjct: 1 MTRPSRFLLSTNSSSTPAAEPPSTVTVESDFVVILAALLCALICVVGLIAVARCAWLRRG 60
Query: 229 FNASDSSYDXXXXXXXXXXXXXGIKKKTLRALPTVSF 339
A + G+KKK L++LP ++
Sbjct: 61 IGAGGNG-------GSQPSANKGLKKKVLQSLPKFTY 90
>gb|EXB56281.1| RING-H2 finger protein ATL80 [Morus notabilis]
Length = 186
Score = 65.1 bits (157), Expect = 9e-09
Identities = 33/69 (47%), Positives = 40/69 (57%)
Frame = +1
Query: 133 SDVILTLAVLLCAFICVLGLGLVARCAWLRRSFNASDSSYDXXXXXXXXXXXXXGIKKKT 312
SD ++ LA LLCA ICVLGL +ARCAWLRR S+ G+KKK
Sbjct: 26 SDFVVILAALLCALICVLGLVAIARCAWLRRLSGGGSSAASASSSRPPPPPPNKGLKKKI 85
Query: 313 LRALPTVSF 339
LR+LP +SF
Sbjct: 86 LRSLPKLSF 94
>ref|XP_004966533.1| PREDICTED: RING-H2 finger protein ATL45-like [Setaria italica]
Length = 191
Score = 65.1 bits (157), Expect = 9e-09
Identities = 43/99 (43%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Frame = +1
Query: 52 MRSPARFLLSSQP--AQEAERMDAALVFHSDVILTLAVLLCAFICVLGLGLVARCAW-LR 222
MR+PAR L QP A A + A + SD+++ LA LCA +CVLGL L++RCA LR
Sbjct: 1 MRAPARLLHVEQPPPAPPAAQNQAVVPADSDMVVILASFLCALVCVLGLALISRCACRLR 60
Query: 223 RSFNASDSSYDXXXXXXXXXXXXXGIKKKTLRALPTVSF 339
R +S SS G+KKK + ALPTV F
Sbjct: 61 RGRGSSPSS----SSEAHPPPPPRGLKKKAIDALPTVPF 95
>dbj|BAK02775.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 211
Score = 63.9 bits (154), Expect = 2e-08
Identities = 36/94 (38%), Positives = 50/94 (53%)
Frame = +1
Query: 58 SPARFLLSSQPAQEAERMDAALVFHSDVILTLAVLLCAFICVLGLGLVARCAWLRRSFNA 237
SP Q + ++ + +SD++L LA LLCA +CVLGL LV+RC RR +A
Sbjct: 26 SPVSMKAPEQRQKRQQQTAPVMAVNSDMVLILASLLCALVCVLGLALVSRCTCRRRRRSA 85
Query: 238 SDSSYDXXXXXXXXXXXXXGIKKKTLRALPTVSF 339
+ S + G+KKK + ALPTVSF
Sbjct: 86 TSSDH--------APPPPKGLKKKAIHALPTVSF 111
>ref|NP_179337.1| RING-H2 finger protein ATL44 [Arabidopsis thaliana]
gi|51316192|sp|O22755.1|ATL44_ARATH RecName:
Full=RING-H2 finger protein ATL44; AltName: Full=RING-H2
zinc finger protein RHA3a
gi|13877953|gb|AAK44054.1|AF370239_1 putative RING zinc
finger protein [Arabidopsis thaliana]
gi|3790573|gb|AAC68673.1| RING-H2 finger protein RHA3a
[Arabidopsis thaliana] gi|4914367|gb|AAD32903.1|
putative RING zinc finger protein [Arabidopsis thaliana]
gi|17065626|gb|AAL33807.1| putative RING zinc finger
protein [Arabidopsis thaliana]
gi|330251537|gb|AEC06631.1| RING-H2 finger protein ATL44
[Arabidopsis thaliana]
Length = 185
Score = 63.5 bits (153), Expect = 3e-08
Identities = 40/97 (41%), Positives = 52/97 (53%), Gaps = 1/97 (1%)
Frame = +1
Query: 52 MRSPARFL-LSSQPAQEAERMDAALVFHSDVILTLAVLLCAFICVLGLGLVARCAWLRRS 228
M P+R L ++ P Q +E M AA SD+++ L+ LLCA ICV GL V RCAWLRR
Sbjct: 1 MTRPSRLLETAAPPPQPSEEMIAA---ESDMVVILSALLCALICVAGLAAVVRCAWLRRF 57
Query: 229 FNASDSSYDXXXXXXXXXXXXXGIKKKTLRALPTVSF 339
DS G+KKK L++LP +F
Sbjct: 58 TAGGDS-----------PSPNKGLKKKALQSLPRSTF 83
>dbj|BAK02242.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 203
Score = 63.5 bits (153), Expect = 3e-08
Identities = 44/108 (40%), Positives = 58/108 (53%), Gaps = 12/108 (11%)
Frame = +1
Query: 52 MRSPARFL------------LSSQPAQEAERMDAALVFHSDVILTLAVLLCAFICVLGLG 195
MR+PA L SS P Q+ E+ + +SD+++ LA LLCA +CVLGL
Sbjct: 1 MRAPASLLHRTALAAAGTGHTSSSPQQQ-EQTAPVMAVNSDMVVILASLLCALVCVLGLA 59
Query: 196 LVARCAWLRRSFNASDSSYDXXXXXXXXXXXXXGIKKKTLRALPTVSF 339
LV+RCA RR +AS S + G+KKK + ALPTVSF
Sbjct: 60 LVSRCA-CRRRRSASSSEHS--------PPPPKGLKKKAIDALPTVSF 98
>ref|XP_002886113.1| ring-H2 finger A3A [Arabidopsis lyrata subsp. lyrata]
gi|297331953|gb|EFH62372.1| ring-H2 finger A3A
[Arabidopsis lyrata subsp. lyrata]
Length = 185
Score = 63.5 bits (153), Expect = 3e-08
Identities = 40/97 (41%), Positives = 52/97 (53%), Gaps = 1/97 (1%)
Frame = +1
Query: 52 MRSPARFL-LSSQPAQEAERMDAALVFHSDVILTLAVLLCAFICVLGLGLVARCAWLRRS 228
M P+R L ++ P Q +E M AA SD+++ L+ LLCA ICV GL V RCAWLRR
Sbjct: 1 MTRPSRLLETAAPPPQPSEEMIAA---ESDMVVILSALLCALICVAGLAAVVRCAWLRRF 57
Query: 229 FNASDSSYDXXXXXXXXXXXXXGIKKKTLRALPTVSF 339
DS G+KKK L++LP +F
Sbjct: 58 TAGGDS-----------PSPNKGLKKKALQSLPRSTF 83
>ref|NP_001047768.1| Os02g0686100 [Oryza sativa Japonica Group]
gi|41052716|dbj|BAD07573.1| putative ring finger protein
[Oryza sativa Japonica Group]
gi|113537299|dbj|BAF09682.1| Os02g0686100 [Oryza sativa
Japonica Group]
Length = 189
Score = 63.2 bits (152), Expect = 4e-08
Identities = 38/92 (41%), Positives = 50/92 (54%)
Frame = +1
Query: 64 ARFLLSSQPAQEAERMDAALVFHSDVILTLAVLLCAFICVLGLGLVARCAWLRRSFNASD 243
AR LL + + E +SD+++ LA LLCA ICVLGLGLVARCA RR A+
Sbjct: 2 ARMLLEAAASGSVEDS-----LNSDLVVILAGLLCALICVLGLGLVARCACTRRWARAAG 56
Query: 244 SSYDXXXXXXXXXXXXXGIKKKTLRALPTVSF 339
G+KK+ LR+LPTV++
Sbjct: 57 GGTAAGGGGGGAAAANKGVKKEVLRSLPTVTY 88
>ref|XP_002887637.1| hypothetical protein ARALYDRAFT_316562 [Arabidopsis lyrata subsp.
lyrata] gi|297333478|gb|EFH63896.1| hypothetical protein
ARALYDRAFT_316562 [Arabidopsis lyrata subsp. lyrata]
Length = 186
Score = 63.2 bits (152), Expect = 4e-08
Identities = 34/73 (46%), Positives = 47/73 (64%), Gaps = 2/73 (2%)
Frame = +1
Query: 127 FHSDVILTLAVLLCAFICVLGLGLVARCAWLRR--SFNASDSSYDXXXXXXXXXXXXXGI 300
F+SD++L LAVLLCA C++GL V+RCAWLRR S N SD ++ G+
Sbjct: 24 FNSDLVLILAVLLCALTCIIGLIAVSRCAWLRRIASRNRSDQTH-----PPPVAAANKGL 78
Query: 301 KKKTLRALPTVSF 339
KKK LR+LP +++
Sbjct: 79 KKKVLRSLPKLTY 91
>ref|XP_006435418.1| hypothetical protein CICLE_v10004041mg [Citrus clementina]
gi|568839917|ref|XP_006473922.1| PREDICTED: RING-H2
finger protein ATL80-like [Citrus sinensis]
gi|557537540|gb|ESR48658.1| hypothetical protein
CICLE_v10004041mg [Citrus clementina]
Length = 198
Score = 62.8 bits (151), Expect = 5e-08
Identities = 39/91 (42%), Positives = 46/91 (50%)
Frame = +1
Query: 67 RFLLSSQPAQEAERMDAALVFHSDVILTLAVLLCAFICVLGLGLVARCAWLRRSFNASDS 246
RFL A AA V SD ++ LA LLCA ICVLGL VARCAWLRR +
Sbjct: 6 RFLSGVNATATASPPPAATV-DSDYVVILAALLCALICVLGLIAVARCAWLRRLSGGGAA 64
Query: 247 SYDXXXXXXXXXXXXXGIKKKTLRALPTVSF 339
+ + G+KKK LR LP +F
Sbjct: 65 ATNPSGTSTRNSPANKGLKKKILRTLPKQTF 95
>ref|XP_006302871.1| hypothetical protein CARUB_v10021002mg [Capsella rubella]
gi|482571581|gb|EOA35769.1| hypothetical protein
CARUB_v10021002mg [Capsella rubella]
Length = 186
Score = 62.4 bits (150), Expect = 6e-08
Identities = 40/93 (43%), Positives = 52/93 (55%), Gaps = 2/93 (2%)
Frame = +1
Query: 67 RFLLSSQPAQEAERMDAALVFHSDVILTLAVLLCAFICVLGLGLVARCAWLRR--SFNAS 240
R L + P AE + +SD++L LAVLLCA CVLGL V+RCAWLRR S N S
Sbjct: 7 RLLQEASPPSPAE---GSPPINSDLVLILAVLLCALTCVLGLIAVSRCAWLRRIASRNRS 63
Query: 241 DSSYDXXXXXXXXXXXXXGIKKKTLRALPTVSF 339
D + G+KKK LR+LP +++
Sbjct: 64 DQT-----DQPPVAAANKGLKKKVLRSLPKLTY 91
>gb|AFK44145.1| unknown [Medicago truncatula]
Length = 116
Score = 62.4 bits (150), Expect = 6e-08
Identities = 39/99 (39%), Positives = 50/99 (50%), Gaps = 3/99 (3%)
Frame = +1
Query: 52 MRSPARFLLSSQPAQEAERM---DAALVFHSDVILTLAVLLCAFICVLGLGLVARCAWLR 222
M P R LLS + + A+ SD ++ LA LLCA ICV+GL VARCAWLR
Sbjct: 1 MTRPLRILLSMETTPTTVVVAPPPEAVAIESDFVVILAALLCALICVVGLIAVARCAWLR 60
Query: 223 RSFNASDSSYDXXXXXXXXXXXXXGIKKKTLRALPTVSF 339
R A +S G+KKK L++LP S+
Sbjct: 61 RDSGAGNSPQQ--------ALANKGLKKKVLQSLPKFSY 91
>ref|XP_003612411.1| Ring finger protein [Medicago truncatula]
gi|355513746|gb|AES95369.1| Ring finger protein
[Medicago truncatula] gi|388496508|gb|AFK36320.1|
unknown [Medicago truncatula]
Length = 215
Score = 62.4 bits (150), Expect = 6e-08
Identities = 39/99 (39%), Positives = 50/99 (50%), Gaps = 3/99 (3%)
Frame = +1
Query: 52 MRSPARFLLSSQPAQEAERM---DAALVFHSDVILTLAVLLCAFICVLGLGLVARCAWLR 222
M P R LLS + + A+ SD ++ LA LLCA ICV+GL VARCAWLR
Sbjct: 1 MTRPLRILLSMETTPTTVVVAPPPEAVAIESDFVVILAALLCALICVVGLIAVARCAWLR 60
Query: 223 RSFNASDSSYDXXXXXXXXXXXXXGIKKKTLRALPTVSF 339
R A +S G+KKK L++LP S+
Sbjct: 61 RDSGAGNSPQQ--------ALANKGLKKKVLQSLPKFSY 91
>gb|EMS54362.1| RING-H2 finger protein ATL80 [Triticum urartu]
Length = 208
Score = 62.0 bits (149), Expect = 8e-08
Identities = 36/93 (38%), Positives = 53/93 (56%)
Frame = +1
Query: 61 PARFLLSSQPAQEAERMDAALVFHSDVILTLAVLLCAFICVLGLGLVARCAWLRRSFNAS 240
P+ +S + ++ ++ + +SD++L LA LLCA +CVLGL L++RC RR S
Sbjct: 21 PSSSPVSMKAPEQQQQTAPPMAVNSDMVLILASLLCALVCVLGLALISRCTCRRR---RS 77
Query: 241 DSSYDXXXXXXXXXXXXXGIKKKTLRALPTVSF 339
SS+D G+KKK + ALPTVSF
Sbjct: 78 ASSFD------DAPPPPKGLKKKVIHALPTVSF 104