BLASTX nr result
ID: Zingiber25_contig00028713
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00028713
(272 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMJ21416.1| hypothetical protein PRUPE_ppa002304mg [Prunus pe... 80 4e-13
ref|XP_004172086.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 77 2e-12
ref|XP_004143712.1| PREDICTED: uncharacterized protein LOC101209... 77 2e-12
ref|XP_004308148.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 77 2e-12
ref|XP_006660856.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 77 2e-12
ref|XP_002322430.2| DEAD box RNA helicase family protein [Populu... 76 4e-12
ref|XP_006421777.1| hypothetical protein CICLE_v10004459mg [Citr... 76 5e-12
gb|EPS64456.1| hypothetical protein M569_10323 [Genlisea aurea] 76 5e-12
ref|XP_003536498.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 76 5e-12
ref|XP_002510890.1| dead box ATP-dependent RNA helicase, putativ... 76 5e-12
ref|XP_006357902.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 75 7e-12
gb|AAR83896.1| RNA helicase PRH75 [Capsicum annuum] 75 7e-12
gb|EOY22996.1| DEAD-box ATP-dependent RNA helicase 7 [Theobroma ... 75 9e-12
ref|NP_201025.1| DEAD/DEAH box RNA helicase PRH75 [Arabidopsis t... 75 9e-12
gb|AAK62631.1| AT5g62190/mmi9_10 [Arabidopsis thaliana] 75 9e-12
emb|CAA68194.1| RNA helicase [Arabidopsis thaliana] 75 9e-12
gb|EXC20882.1| DEAD-box ATP-dependent RNA helicase 7 [Morus nota... 75 1e-11
ref|XP_002318863.2| DEAD box RNA helicase family protein [Populu... 74 2e-11
ref|XP_006279587.1| hypothetical protein CARUB_v10026032mg [Caps... 74 2e-11
gb|AAF40306.1|AF156667_1 RNA helicase [Vigna radiata] 74 2e-11
>gb|EMJ21416.1| hypothetical protein PRUPE_ppa002304mg [Prunus persica]
Length = 690
Score = 79.7 bits (195), Expect = 4e-13
Identities = 36/61 (59%), Positives = 50/61 (81%)
Frame = +2
Query: 50 GFLDIKKRSLLSSLENYVTVILQTGNTIYSPSFVFSVLGRHLPEEKIQNLENVSLTEDGY 229
G+ +IKKRSLLSS+EN+VTV+L+ G IYSPSF + VL R LPEEK+++++ ++LT DG
Sbjct: 545 GYTEIKKRSLLSSMENHVTVLLEAGKPIYSPSFAYGVLRRFLPEEKVESVKGMALTADGK 604
Query: 230 G 232
G
Sbjct: 605 G 605
>ref|XP_004172086.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 7-like [Cucumis
sativus]
Length = 696
Score = 77.4 bits (189), Expect = 2e-12
Identities = 34/59 (57%), Positives = 49/59 (83%)
Frame = +2
Query: 50 GFLDIKKRSLLSSLENYVTVILQTGNTIYSPSFVFSVLGRHLPEEKIQNLENVSLTEDG 226
G+ +IK RSLL+S+ENYVT+IL+ G +YSPSF +S+L R LPEEK+++++ +SLT DG
Sbjct: 540 GYTEIKSRSLLTSMENYVTLILEPGKPMYSPSFAYSILRRFLPEEKVESVKGMSLTADG 598
>ref|XP_004143712.1| PREDICTED: uncharacterized protein LOC101209696 [Cucumis sativus]
Length = 1247
Score = 77.4 bits (189), Expect = 2e-12
Identities = 34/59 (57%), Positives = 49/59 (83%)
Frame = +2
Query: 50 GFLDIKKRSLLSSLENYVTVILQTGNTIYSPSFVFSVLGRHLPEEKIQNLENVSLTEDG 226
G+ +IK RSLL+S+ENYVT+IL+ G +YSPSF +S+L R LPEEK+++++ +SLT DG
Sbjct: 1091 GYTEIKSRSLLTSMENYVTLILEPGKPMYSPSFAYSILRRFLPEEKVESVKGMSLTADG 1149
>ref|XP_004308148.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 7-like [Fragaria
vesca subsp. vesca]
Length = 680
Score = 77.0 bits (188), Expect = 2e-12
Identities = 37/77 (48%), Positives = 52/77 (67%)
Frame = +2
Query: 2 GLSPXXXXXXXXXXXXGFLDIKKRSLLSSLENYVTVILQTGNTIYSPSFVFSVLGRHLPE 181
GLS G+ D+KKRSLLSS+EN+VTV+L+ G IY+ SF +S L R LPE
Sbjct: 526 GLSAVDLLSKALAKAAGYTDVKKRSLLSSMENHVTVLLEAGKPIYTASFAYSALRRFLPE 585
Query: 182 EKIQNLENVSLTEDGYG 232
EK+++++ ++LT DG G
Sbjct: 586 EKVESVKGMALTTDGKG 602
>ref|XP_006660856.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 7-like [Oryza
brachyantha] gi|110430646|gb|ABG73436.1| DEAD/DEAH box
helicase family protein [Oryza brachyantha]
Length = 688
Score = 77.0 bits (188), Expect = 2e-12
Identities = 33/61 (54%), Positives = 49/61 (80%)
Frame = +2
Query: 50 GFLDIKKRSLLSSLENYVTVILQTGNTIYSPSFVFSVLGRHLPEEKIQNLENVSLTEDGY 229
G+ DIKKRSLLSS+EN+ T++LQTG ++Y+P FV S L R +PEE++ +++ ++LT DG
Sbjct: 540 GYTDIKKRSLLSSMENHTTLLLQTGRSVYAPGFVLSTLKRFMPEERLADVKGITLTADGT 599
Query: 230 G 232
G
Sbjct: 600 G 600
>ref|XP_002322430.2| DEAD box RNA helicase family protein [Populus trichocarpa]
gi|550322689|gb|EEF06557.2| DEAD box RNA helicase family
protein [Populus trichocarpa]
Length = 680
Score = 76.3 bits (186), Expect = 4e-12
Identities = 37/77 (48%), Positives = 53/77 (68%)
Frame = +2
Query: 2 GLSPXXXXXXXXXXXXGFLDIKKRSLLSSLENYVTVILQTGNTIYSPSFVFSVLGRHLPE 181
GLS G+ +IK RSLLSS+EN+VT++L++G IY+PSF FSVL R LPE
Sbjct: 520 GLSAVELLAKALAKATGYTEIKSRSLLSSMENHVTLLLESGKPIYTPSFAFSVLRRILPE 579
Query: 182 EKIQNLENVSLTEDGYG 232
+K++++ ++LT DG G
Sbjct: 580 DKVESVTGMTLTTDGNG 596
>ref|XP_006421777.1| hypothetical protein CICLE_v10004459mg [Citrus clementina]
gi|568874330|ref|XP_006490269.1| PREDICTED: DEAD-box
ATP-dependent RNA helicase 7-like [Citrus sinensis]
gi|557523650|gb|ESR35017.1| hypothetical protein
CICLE_v10004459mg [Citrus clementina]
Length = 695
Score = 75.9 bits (185), Expect = 5e-12
Identities = 38/77 (49%), Positives = 51/77 (66%)
Frame = +2
Query: 2 GLSPXXXXXXXXXXXXGFLDIKKRSLLSSLENYVTVILQTGNTIYSPSFVFSVLGRHLPE 181
GLS G+ +IK RSLLSSLE++VTV+L+ G IY+PSF F VL R LPE
Sbjct: 527 GLSAAELLAKALAKAVGYTEIKSRSLLSSLEDHVTVVLEAGKPIYTPSFAFGVLRRFLPE 586
Query: 182 EKIQNLENVSLTEDGYG 232
EK++ ++ ++LT DG G
Sbjct: 587 EKVELVKGMALTADGNG 603
>gb|EPS64456.1| hypothetical protein M569_10323 [Genlisea aurea]
Length = 693
Score = 75.9 bits (185), Expect = 5e-12
Identities = 35/61 (57%), Positives = 48/61 (78%)
Frame = +2
Query: 50 GFLDIKKRSLLSSLENYVTVILQTGNTIYSPSFVFSVLGRHLPEEKIQNLENVSLTEDGY 229
G+ +IK RSLLSS+ENYVTV+L+ G+ I+SPSF F VL R LPE K+ +++ ++LT DG
Sbjct: 536 GYTEIKTRSLLSSMENYVTVVLECGSQIHSPSFAFGVLRRFLPEGKVDSIKGLALTADGR 595
Query: 230 G 232
G
Sbjct: 596 G 596
>ref|XP_003536498.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 7-like [Glycine max]
Length = 697
Score = 75.9 bits (185), Expect = 5e-12
Identities = 33/61 (54%), Positives = 50/61 (81%)
Frame = +2
Query: 50 GFLDIKKRSLLSSLENYVTVILQTGNTIYSPSFVFSVLGRHLPEEKIQNLENVSLTEDGY 229
G+ D+K+RSLL+S+ENYVT++L+TG IY+ S+ +S+L R LPEEK++ ++ +SLT DG
Sbjct: 552 GYTDVKQRSLLTSMENYVTLVLETGKPIYTQSYGYSILRRFLPEEKVEAVKGLSLTADGN 611
Query: 230 G 232
G
Sbjct: 612 G 612
>ref|XP_002510890.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223550005|gb|EEF51492.1| dead box ATP-dependent RNA
helicase, putative [Ricinus communis]
Length = 690
Score = 75.9 bits (185), Expect = 5e-12
Identities = 36/77 (46%), Positives = 52/77 (67%)
Frame = +2
Query: 2 GLSPXXXXXXXXXXXXGFLDIKKRSLLSSLENYVTVILQTGNTIYSPSFVFSVLGRHLPE 181
GLS G+ +IK RSLLSS+EN+VT++L+ G IY+PSF F VL R LPE
Sbjct: 523 GLSAVELLAKALANAAGYTEIKSRSLLSSMENHVTLLLEAGRPIYTPSFAFGVLRRFLPE 582
Query: 182 EKIQNLENVSLTEDGYG 232
+K+++++ ++LT DG G
Sbjct: 583 DKVESVKGMTLTADGKG 599
>ref|XP_006357902.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 7-like [Solanum
tuberosum]
Length = 679
Score = 75.5 bits (184), Expect = 7e-12
Identities = 37/76 (48%), Positives = 52/76 (68%)
Frame = +2
Query: 5 LSPXXXXXXXXXXXXGFLDIKKRSLLSSLENYVTVILQTGNTIYSPSFVFSVLGRHLPEE 184
LSP G+ +IK RSLL+S+EN VT++L+ G I+SPSFV+SVL R LPEE
Sbjct: 529 LSPAELLAKALAKAAGYSEIKTRSLLTSMENCVTLLLECGRPIFSPSFVYSVLRRFLPEE 588
Query: 185 KIQNLENVSLTEDGYG 232
K++++ ++LT DG G
Sbjct: 589 KVESINGLTLTADGKG 604
>gb|AAR83896.1| RNA helicase PRH75 [Capsicum annuum]
Length = 212
Score = 75.5 bits (184), Expect = 7e-12
Identities = 37/76 (48%), Positives = 52/76 (68%)
Frame = +2
Query: 5 LSPXXXXXXXXXXXXGFLDIKKRSLLSSLENYVTVILQTGNTIYSPSFVFSVLGRHLPEE 184
LSP G+ +IK RSLL+S+EN VT++L+ G I+SPSFV+SVL R LPEE
Sbjct: 68 LSPAELLAKALAKAAGYSEIKTRSLLTSMENCVTLLLECGRPIFSPSFVYSVLRRFLPEE 127
Query: 185 KIQNLENVSLTEDGYG 232
K++++ ++LT DG G
Sbjct: 128 KVESINGLTLTADGKG 143
>gb|EOY22996.1| DEAD-box ATP-dependent RNA helicase 7 [Theobroma cacao]
Length = 1077
Score = 75.1 bits (183), Expect = 9e-12
Identities = 37/77 (48%), Positives = 52/77 (67%)
Frame = +2
Query: 2 GLSPXXXXXXXXXXXXGFLDIKKRSLLSSLENYVTVILQTGNTIYSPSFVFSVLGRHLPE 181
GLS G+ +IK RSLL+S+EN+VT++L+ G IY+ SFVF VL R LPE
Sbjct: 901 GLSAEDLLAKALAKAAGYSEIKSRSLLTSMENHVTLLLEAGKPIYTLSFVFGVLKRFLPE 960
Query: 182 EKIQNLENVSLTEDGYG 232
EK+Q+++ ++LT DG G
Sbjct: 961 EKVQSVQGMTLTADGMG 977
>ref|NP_201025.1| DEAD/DEAH box RNA helicase PRH75 [Arabidopsis thaliana]
gi|108861902|sp|Q39189.2|RH7_ARATH RecName:
Full=DEAD-box ATP-dependent RNA helicase 7
gi|8809632|dbj|BAA97183.1| RNA helicase [Arabidopsis
thaliana] gi|15810145|gb|AAL07216.1| putative RNA
helicase [Arabidopsis thaliana]
gi|30793911|gb|AAP40408.1| putative DEAD/DEAH box RNA
helicase PRH75 [Arabidopsis thaliana]
gi|332010196|gb|AED97579.1| DEAD/DEAH box RNA helicase
PRH75 [Arabidopsis thaliana]
Length = 671
Score = 75.1 bits (183), Expect = 9e-12
Identities = 38/77 (49%), Positives = 51/77 (66%)
Frame = +2
Query: 2 GLSPXXXXXXXXXXXXGFLDIKKRSLLSSLENYVTVILQTGNTIYSPSFVFSVLGRHLPE 181
GLS GF +IKKRSLL+S+ENYVT+ L+ G IYSPSFV+ +L R LP+
Sbjct: 514 GLSAEVLLAKALAKTAGFTEIKKRSLLTSMENYVTLHLEAGKPIYSPSFVYGLLRRVLPD 573
Query: 182 EKIQNLENVSLTEDGYG 232
+K++ +E +SLT D G
Sbjct: 574 DKVEMIEGLSLTADKTG 590
>gb|AAK62631.1| AT5g62190/mmi9_10 [Arabidopsis thaliana]
Length = 671
Score = 75.1 bits (183), Expect = 9e-12
Identities = 38/77 (49%), Positives = 51/77 (66%)
Frame = +2
Query: 2 GLSPXXXXXXXXXXXXGFLDIKKRSLLSSLENYVTVILQTGNTIYSPSFVFSVLGRHLPE 181
GLS GF +IKKRSLL+S+ENYVT+ L+ G IYSPSFV+ +L R LP+
Sbjct: 514 GLSAEVLLAKALAKTAGFTEIKKRSLLTSMENYVTLHLEAGKPIYSPSFVYGLLRRVLPD 573
Query: 182 EKIQNLENVSLTEDGYG 232
+K++ +E +SLT D G
Sbjct: 574 DKVEMIEGLSLTADKTG 590
>emb|CAA68194.1| RNA helicase [Arabidopsis thaliana]
Length = 671
Score = 75.1 bits (183), Expect = 9e-12
Identities = 38/77 (49%), Positives = 51/77 (66%)
Frame = +2
Query: 2 GLSPXXXXXXXXXXXXGFLDIKKRSLLSSLENYVTVILQTGNTIYSPSFVFSVLGRHLPE 181
GLS GF +IKKRSLL+S+ENYVT+ L+ G IYSPSFV+ +L R LP+
Sbjct: 514 GLSAEVLLAKALAKTAGFTEIKKRSLLTSMENYVTLHLEAGKPIYSPSFVYGLLRRVLPD 573
Query: 182 EKIQNLENVSLTEDGYG 232
+K++ +E +SLT D G
Sbjct: 574 DKVEMIEGLSLTADKTG 590
>gb|EXC20882.1| DEAD-box ATP-dependent RNA helicase 7 [Morus notabilis]
Length = 703
Score = 74.7 bits (182), Expect = 1e-11
Identities = 36/77 (46%), Positives = 51/77 (66%)
Frame = +2
Query: 2 GLSPXXXXXXXXXXXXGFLDIKKRSLLSSLENYVTVILQTGNTIYSPSFVFSVLGRHLPE 181
GLS G+ +IK RSLL+S+ENYVTV+L+ G IY+PS+ + VL R LPE
Sbjct: 532 GLSAVELLAKALAKAAGYSEIKSRSLLTSMENYVTVLLEAGRPIYTPSYAYGVLRRFLPE 591
Query: 182 EKIQNLENVSLTEDGYG 232
EK ++++ ++LT DG G
Sbjct: 592 EKAESVKGLTLTADGRG 608
>ref|XP_002318863.2| DEAD box RNA helicase family protein [Populus trichocarpa]
gi|550327101|gb|EEE97083.2| DEAD box RNA helicase family
protein [Populus trichocarpa]
Length = 687
Score = 74.3 bits (181), Expect = 2e-11
Identities = 35/77 (45%), Positives = 53/77 (68%)
Frame = +2
Query: 2 GLSPXXXXXXXXXXXXGFLDIKKRSLLSSLENYVTVILQTGNTIYSPSFVFSVLGRHLPE 181
GLS G+ +IK RSLL+S++N+VT++L++G IY+PSF FSV+ R LPE
Sbjct: 516 GLSAVELLAKALAKATGYTEIKSRSLLTSMDNHVTLLLESGKPIYTPSFAFSVMRRILPE 575
Query: 182 EKIQNLENVSLTEDGYG 232
+K++++ +SLT DG G
Sbjct: 576 DKVESVTGMSLTADGNG 592
>ref|XP_006279587.1| hypothetical protein CARUB_v10026032mg [Capsella rubella]
gi|482548291|gb|EOA12485.1| hypothetical protein
CARUB_v10026032mg [Capsella rubella]
Length = 668
Score = 74.3 bits (181), Expect = 2e-11
Identities = 36/77 (46%), Positives = 52/77 (67%)
Frame = +2
Query: 2 GLSPXXXXXXXXXXXXGFLDIKKRSLLSSLENYVTVILQTGNTIYSPSFVFSVLGRHLPE 181
GLS GF +IKKRSLL+S+EN+VT+ L+ G I+SPSFV+ +L R++PE
Sbjct: 514 GLSAEVLLAKALAKTAGFTEIKKRSLLTSMENHVTLHLEAGKPIFSPSFVYGMLRRNIPE 573
Query: 182 EKIQNLENVSLTEDGYG 232
+K++ +E +SLT D G
Sbjct: 574 DKVERIEGLSLTADKTG 590
>gb|AAF40306.1|AF156667_1 RNA helicase [Vigna radiata]
Length = 713
Score = 74.3 bits (181), Expect = 2e-11
Identities = 32/61 (52%), Positives = 49/61 (80%)
Frame = +2
Query: 50 GFLDIKKRSLLSSLENYVTVILQTGNTIYSPSFVFSVLGRHLPEEKIQNLENVSLTEDGY 229
G+ +IK+RSLL+S+ENYVT++L+ G I++PSF + +L R LPEEK++ ++ +SLT DG
Sbjct: 563 GYTEIKQRSLLTSMENYVTLLLEIGKPIFTPSFAYGILRRFLPEEKVEAVKGLSLTADGN 622
Query: 230 G 232
G
Sbjct: 623 G 623