BLASTX nr result
ID: Zingiber25_contig00028671
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00028671
(409 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006660043.1| PREDICTED: CBS domain-containing protein CBS... 110 2e-22
ref|XP_003573692.1| PREDICTED: CBS domain-containing protein CBS... 108 7e-22
ref|NP_001061514.1| Os08g0313200 [Oryza sativa Japonica Group] g... 107 2e-21
ref|XP_003539349.1| PREDICTED: CBS domain-containing protein CBS... 105 6e-21
ref|XP_006412273.1| hypothetical protein EUTSA_v10026144mg [Eutr... 105 8e-21
ref|XP_003517313.1| PREDICTED: CBS domain-containing protein CBS... 104 1e-20
gb|EXB54170.1| CBS domain-containing protein CBSX1 [Morus notabi... 103 2e-20
ref|XP_006855151.1| hypothetical protein AMTR_s00051p00045410 [A... 102 7e-20
ref|NP_195409.1| CBS domain-containing protein CBSX1 [Arabidopsi... 102 7e-20
ref|XP_004304019.1| PREDICTED: CBS domain-containing protein CBS... 101 9e-20
ref|XP_004233443.1| PREDICTED: CBS domain-containing protein CBS... 101 9e-20
gb|AAQ56349.1| putative CBS domain containing protein [Oryza sat... 101 9e-20
ref|XP_006360213.1| PREDICTED: CBS domain-containing protein CBS... 101 1e-19
ref|XP_006339869.1| PREDICTED: CBS domain-containing protein CBS... 101 1e-19
pdb|4GQW|A Chain A, Crystal Structure Of Cbs-pair Protein, Cbsx1... 101 1e-19
pdb|4GQV|A Chain A, Crystal Structure Of Cbs-pair Protein, Cbsx1... 101 1e-19
gb|EOX91502.1| Cystathionine beta-synthase family protein isofor... 100 2e-19
gb|EOX91501.1| Cystathionine beta-synthase family protein isofor... 100 2e-19
gb|EOX91500.1| Cystathionine beta-synthase family protein isofor... 100 2e-19
gb|EOX91499.1| Cystathionine beta-synthase family protein isofor... 100 2e-19
>ref|XP_006660043.1| PREDICTED: CBS domain-containing protein CBSX1, chloroplastic-like
[Oryza brachyantha]
Length = 223
Score = 110 bits (275), Expect = 2e-22
Identities = 50/64 (78%), Positives = 60/64 (93%)
Frame = -3
Query: 194 HNGTVTSQDNGFYTVGDFMTKKEDLHVVKPSTSVDEALELLVENRVTGFPVIDDDWNLVG 15
H+ +V Q++G YTVGDFMTK+E+LHVVKPSTSVDEALE+LVE+R+TGFPVIDD+WNLVG
Sbjct: 50 HHTSVAGQNSGIYTVGDFMTKREELHVVKPSTSVDEALEMLVEHRITGFPVIDDEWNLVG 109
Query: 14 VVSD 3
VVSD
Sbjct: 110 VVSD 113
>ref|XP_003573692.1| PREDICTED: CBS domain-containing protein CBSX1, chloroplastic-like
[Brachypodium distachyon]
Length = 233
Score = 108 bits (270), Expect = 7e-22
Identities = 58/104 (55%), Positives = 68/104 (65%), Gaps = 2/104 (1%)
Frame = -3
Query: 308 PSLLPLHSRRP--APFLSPRRQRLFVXXXXXXXXXXXXXAHNGTVTSQDNGFYTVGDFMT 135
PS LP R AP PR + H+G+V + + YTVGDFMT
Sbjct: 20 PSRLPAGPRMAPAAPRALPRTSSVRASAGAAATAARGHLPHHGSVAGETSRTYTVGDFMT 79
Query: 134 KKEDLHVVKPSTSVDEALELLVENRVTGFPVIDDDWNLVGVVSD 3
K+E+LHVVKP+TSVDEALE LVE+R+TGFPVIDDDWNLVGVVSD
Sbjct: 80 KREELHVVKPTTSVDEALERLVEHRITGFPVIDDDWNLVGVVSD 123
>ref|NP_001061514.1| Os08g0313200 [Oryza sativa Japonica Group]
gi|50508236|dbj|BAD31758.1| putative CBS domain
containing protein [Oryza sativa Japonica Group]
gi|113623483|dbj|BAF23428.1| Os08g0313200 [Oryza sativa
Japonica Group] gi|215768507|dbj|BAH00736.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|218194170|gb|EEC76597.1| hypothetical protein
OsI_14449 [Oryza sativa Indica Group]
gi|222640324|gb|EEE68456.1| hypothetical protein
OsJ_26849 [Oryza sativa Japonica Group]
gi|258644543|dbj|BAI39797.1| CBS domain-containing
protein -like [Oryza sativa Indica Group]
gi|258644675|dbj|BAI39922.1| CBS domain-containing
protein -like [Oryza sativa Indica Group]
Length = 235
Score = 107 bits (266), Expect = 2e-21
Identities = 48/64 (75%), Positives = 59/64 (92%)
Frame = -3
Query: 194 HNGTVTSQDNGFYTVGDFMTKKEDLHVVKPSTSVDEALELLVENRVTGFPVIDDDWNLVG 15
H+ +V Q++G YTVGDFMTK+E+LHVVK +TSVDEALE+LVE+R+TGFPVIDD+WNLVG
Sbjct: 62 HHASVAGQNSGIYTVGDFMTKREELHVVKSTTSVDEALEMLVEHRITGFPVIDDEWNLVG 121
Query: 14 VVSD 3
VVSD
Sbjct: 122 VVSD 125
>ref|XP_003539349.1| PREDICTED: CBS domain-containing protein CBSX1, chloroplastic
[Glycine max] gi|255632210|gb|ACU16463.1| unknown
[Glycine max]
Length = 228
Score = 105 bits (262), Expect = 6e-21
Identities = 51/65 (78%), Positives = 58/65 (89%), Gaps = 4/65 (6%)
Frame = -3
Query: 185 TVTSQD----NGFYTVGDFMTKKEDLHVVKPSTSVDEALELLVENRVTGFPVIDDDWNLV 18
T+T+ D +G YTVGDFMTKKEDLHVVKP+TSVDEALE+LVENR+TGFPVIDD+W LV
Sbjct: 54 TLTANDVSPRSGLYTVGDFMTKKEDLHVVKPTTSVDEALEILVENRITGFPVIDDNWKLV 113
Query: 17 GVVSD 3
GVVSD
Sbjct: 114 GVVSD 118
>ref|XP_006412273.1| hypothetical protein EUTSA_v10026144mg [Eutrema salsugineum]
gi|557113443|gb|ESQ53726.1| hypothetical protein
EUTSA_v10026144mg [Eutrema salsugineum]
Length = 233
Score = 105 bits (261), Expect = 8e-21
Identities = 64/125 (51%), Positives = 75/125 (60%)
Frame = -3
Query: 377 GGDMLSMELVLVRSPPTLGVNASPSLLPLHSRRPAPFLSPRRQRLFVXXXXXXXXXXXXX 198
G LS L + R P +N LLP + LS RR+ F
Sbjct: 2 GSISLSNSLPITRLPLLTSLNQC--LLPTSTSFSLSPLSNRRRSTFSPLIAASAVFAAPA 59
Query: 197 AHNGTVTSQDNGFYTVGDFMTKKEDLHVVKPSTSVDEALELLVENRVTGFPVIDDDWNLV 18
N +V ++ NG YTVGDFMT++E LHVVKPSTSVD+ALELLVE +VTG PVIDDDWNLV
Sbjct: 60 GVNNSVPAR-NGGYTVGDFMTRREHLHVVKPSTSVDDALELLVEKKVTGLPVIDDDWNLV 118
Query: 17 GVVSD 3
GVVSD
Sbjct: 119 GVVSD 123
>ref|XP_003517313.1| PREDICTED: CBS domain-containing protein CBSX1, chloroplastic-like
[Glycine max]
Length = 228
Score = 104 bits (260), Expect = 1e-20
Identities = 49/58 (84%), Positives = 54/58 (93%)
Frame = -3
Query: 176 SQDNGFYTVGDFMTKKEDLHVVKPSTSVDEALELLVENRVTGFPVIDDDWNLVGVVSD 3
S +G YTVGDFMTKKEDLHVVKP+TSVDEALE+LVENR+TGFPVIDD+W LVGVVSD
Sbjct: 62 SPRSGLYTVGDFMTKKEDLHVVKPTTSVDEALEILVENRITGFPVIDDNWKLVGVVSD 119
>gb|EXB54170.1| CBS domain-containing protein CBSX1 [Morus notabilis]
Length = 240
Score = 103 bits (257), Expect = 2e-20
Identities = 50/67 (74%), Positives = 57/67 (85%), Gaps = 4/67 (5%)
Frame = -3
Query: 191 NGTVTSQD----NGFYTVGDFMTKKEDLHVVKPSTSVDEALELLVENRVTGFPVIDDDWN 24
NGT+T+ +G YTVGDFMTKKE LHVVKP+T+VDEALE LVENR+TGFPVIDDDW
Sbjct: 71 NGTLTANSVPAKSGLYTVGDFMTKKEHLHVVKPTTTVDEALETLVENRITGFPVIDDDWK 130
Query: 23 LVGVVSD 3
LVG+VSD
Sbjct: 131 LVGLVSD 137
>ref|XP_006855151.1| hypothetical protein AMTR_s00051p00045410 [Amborella trichopoda]
gi|548858904|gb|ERN16618.1| hypothetical protein
AMTR_s00051p00045410 [Amborella trichopoda]
Length = 243
Score = 102 bits (253), Expect = 7e-20
Identities = 46/55 (83%), Positives = 52/55 (94%)
Frame = -3
Query: 167 NGFYTVGDFMTKKEDLHVVKPSTSVDEALELLVENRVTGFPVIDDDWNLVGVVSD 3
NG YTVG+FMT+KED+HVVKP+T+VDEALE LVENR+TGFPVIDDDW LVGVVSD
Sbjct: 77 NGVYTVGEFMTRKEDMHVVKPTTTVDEALEALVENRITGFPVIDDDWKLVGVVSD 131
>ref|NP_195409.1| CBS domain-containing protein CBSX1 [Arabidopsis thaliana]
gi|75219197|sp|O23193.2|CBSX1_ARATH RecName: Full=CBS
domain-containing protein CBSX1, chloroplastic; AltName:
Full=CBS domain-containing protein 2; Short=AtCDCP2;
AltName: Full=Protein LOSS OF THE TIMING OF ET AND JA
BIOSYNTHESIS 2; Short=AtLEJ2; Flags: Precursor
gi|4006881|emb|CAB16799.1| putative protein [Arabidopsis
thaliana] gi|7270640|emb|CAB80357.1| putative protein
[Arabidopsis thaliana] gi|21537376|gb|AAM61717.1|
unknown [Arabidopsis thaliana]
gi|28392900|gb|AAO41886.1| unknown protein [Arabidopsis
thaliana] gi|28827758|gb|AAO50723.1| unknown protein
[Arabidopsis thaliana] gi|332661316|gb|AEE86716.1|
cystathionine beta-synthase domain-containing protein
[Arabidopsis thaliana]
Length = 236
Score = 102 bits (253), Expect = 7e-20
Identities = 47/59 (79%), Positives = 55/59 (93%)
Frame = -3
Query: 179 TSQDNGFYTVGDFMTKKEDLHVVKPSTSVDEALELLVENRVTGFPVIDDDWNLVGVVSD 3
+S +G YTVG+FMTKKEDLHVVKP+T+VDEALELLVENR+TGFPVID+DW LVG+VSD
Sbjct: 68 SSPRSGVYTVGEFMTKKEDLHVVKPTTTVDEALELLVENRITGFPVIDEDWKLVGLVSD 126
>ref|XP_004304019.1| PREDICTED: CBS domain-containing protein CBSX1, chloroplastic-like
[Fragaria vesca subsp. vesca]
Length = 239
Score = 101 bits (252), Expect = 9e-20
Identities = 63/125 (50%), Positives = 74/125 (59%)
Frame = -3
Query: 377 GGDMLSMELVLVRSPPTLGVNASPSLLPLHSRRPAPFLSPRRQRLFVXXXXXXXXXXXXX 198
G + L + + L PTL S SL PL S P+P L Q L +
Sbjct: 3 GSNSLQIPIALPNHTPTLFSPLSFSL-PLLS--PSPLLRRPFQTLPLSIRPRRASTLASS 59
Query: 197 AHNGTVTSQDNGFYTVGDFMTKKEDLHVVKPSTSVDEALELLVENRVTGFPVIDDDWNLV 18
A + Q NG YTVGDFMT KE LHVVKPST+VD+AL+ LVE R+TGFPV+DDDW LV
Sbjct: 60 AAGVANSVQRNGHYTVGDFMTTKESLHVVKPSTTVDQALDFLVEKRITGFPVVDDDWKLV 119
Query: 17 GVVSD 3
GVVSD
Sbjct: 120 GVVSD 124
>ref|XP_004233443.1| PREDICTED: CBS domain-containing protein CBSX1, chloroplastic-like
[Solanum lycopersicum]
Length = 236
Score = 101 bits (252), Expect = 9e-20
Identities = 46/55 (83%), Positives = 51/55 (92%)
Frame = -3
Query: 167 NGFYTVGDFMTKKEDLHVVKPSTSVDEALELLVENRVTGFPVIDDDWNLVGVVSD 3
NG YTVGDFMT+K+DLHVVKPSTSVDEALE LVE R+TGFPV+DDDW LVG+VSD
Sbjct: 70 NGVYTVGDFMTRKDDLHVVKPSTSVDEALETLVERRITGFPVVDDDWKLVGLVSD 124
>gb|AAQ56349.1| putative CBS domain containing protein [Oryza sativa Japonica
Group]
Length = 190
Score = 101 bits (252), Expect = 9e-20
Identities = 46/57 (80%), Positives = 55/57 (96%)
Frame = -3
Query: 173 QDNGFYTVGDFMTKKEDLHVVKPSTSVDEALELLVENRVTGFPVIDDDWNLVGVVSD 3
Q++G YTVGDFMTK+E+LHVVK +TSVDEALE+LVE+R+TGFPVIDD+WNLVGVVSD
Sbjct: 24 QNSGIYTVGDFMTKREELHVVKSTTSVDEALEMLVEHRITGFPVIDDEWNLVGVVSD 80
>ref|XP_006360213.1| PREDICTED: CBS domain-containing protein CBSX1, chloroplastic-like
[Solanum tuberosum]
Length = 236
Score = 101 bits (251), Expect = 1e-19
Identities = 45/55 (81%), Positives = 52/55 (94%)
Frame = -3
Query: 167 NGFYTVGDFMTKKEDLHVVKPSTSVDEALELLVENRVTGFPVIDDDWNLVGVVSD 3
NG YTVGDFMT+K++LHVVKPSTSVDEALE+LVE R+TGFPV+DDDW LVG+VSD
Sbjct: 70 NGVYTVGDFMTRKDELHVVKPSTSVDEALEILVERRITGFPVVDDDWKLVGLVSD 124
>ref|XP_006339869.1| PREDICTED: CBS domain-containing protein CBSX1, chloroplastic-like
[Solanum tuberosum]
Length = 232
Score = 101 bits (251), Expect = 1e-19
Identities = 47/61 (77%), Positives = 54/61 (88%)
Frame = -3
Query: 185 TVTSQDNGFYTVGDFMTKKEDLHVVKPSTSVDEALELLVENRVTGFPVIDDDWNLVGVVS 6
T S NG YTVGDFMT+KE+LHVVKP+TSVDEALE LVE+R+TGFPVIDD+W LVG+VS
Sbjct: 62 TANSPRNGVYTVGDFMTRKEELHVVKPTTSVDEALEALVEHRITGFPVIDDNWKLVGLVS 121
Query: 5 D 3
D
Sbjct: 122 D 122
>pdb|4GQW|A Chain A, Crystal Structure Of Cbs-pair Protein, Cbsx1 (loop
Deletion) From Arabidopsis Thaliana
Length = 152
Score = 101 bits (251), Expect = 1e-19
Identities = 46/55 (83%), Positives = 53/55 (96%)
Frame = -3
Query: 167 NGFYTVGDFMTKKEDLHVVKPSTSVDEALELLVENRVTGFPVIDDDWNLVGVVSD 3
+G YTVG+FMTKKEDLHVVKP+T+VDEALELLVENR+TGFPVID+DW LVG+VSD
Sbjct: 2 SGVYTVGEFMTKKEDLHVVKPTTTVDEALELLVENRITGFPVIDEDWKLVGLVSD 56
>pdb|4GQV|A Chain A, Crystal Structure Of Cbs-pair Protein, Cbsx1 From
Arabidopsis Thaliana
Length = 166
Score = 101 bits (251), Expect = 1e-19
Identities = 46/55 (83%), Positives = 53/55 (96%)
Frame = -3
Query: 167 NGFYTVGDFMTKKEDLHVVKPSTSVDEALELLVENRVTGFPVIDDDWNLVGVVSD 3
+G YTVG+FMTKKEDLHVVKP+T+VDEALELLVENR+TGFPVID+DW LVG+VSD
Sbjct: 2 SGVYTVGEFMTKKEDLHVVKPTTTVDEALELLVENRITGFPVIDEDWKLVGLVSD 56
>gb|EOX91502.1| Cystathionine beta-synthase family protein isoform 4 [Theobroma
cacao]
Length = 230
Score = 100 bits (250), Expect = 2e-19
Identities = 49/67 (73%), Positives = 57/67 (85%), Gaps = 4/67 (5%)
Frame = -3
Query: 191 NGTVT----SQDNGFYTVGDFMTKKEDLHVVKPSTSVDEALELLVENRVTGFPVIDDDWN 24
NGT+T S G YTVGDFMT+KE+LHVVKP+T+VDEALE LVE+R+TGFPVIDDDW
Sbjct: 66 NGTLTANSVSPTGGVYTVGDFMTRKENLHVVKPTTTVDEALETLVEHRITGFPVIDDDWK 125
Query: 23 LVGVVSD 3
LVG+VSD
Sbjct: 126 LVGLVSD 132
>gb|EOX91501.1| Cystathionine beta-synthase family protein isoform 3 [Theobroma
cacao]
Length = 187
Score = 100 bits (250), Expect = 2e-19
Identities = 49/67 (73%), Positives = 57/67 (85%), Gaps = 4/67 (5%)
Frame = -3
Query: 191 NGTVT----SQDNGFYTVGDFMTKKEDLHVVKPSTSVDEALELLVENRVTGFPVIDDDWN 24
NGT+T S G YTVGDFMT+KE+LHVVKP+T+VDEALE LVE+R+TGFPVIDDDW
Sbjct: 66 NGTLTANSVSPTGGVYTVGDFMTRKENLHVVKPTTTVDEALETLVEHRITGFPVIDDDWK 125
Query: 23 LVGVVSD 3
LVG+VSD
Sbjct: 126 LVGLVSD 132
>gb|EOX91500.1| Cystathionine beta-synthase family protein isoform 2 [Theobroma
cacao]
Length = 198
Score = 100 bits (250), Expect = 2e-19
Identities = 49/67 (73%), Positives = 57/67 (85%), Gaps = 4/67 (5%)
Frame = -3
Query: 191 NGTVT----SQDNGFYTVGDFMTKKEDLHVVKPSTSVDEALELLVENRVTGFPVIDDDWN 24
NGT+T S G YTVGDFMT+KE+LHVVKP+T+VDEALE LVE+R+TGFPVIDDDW
Sbjct: 66 NGTLTANSVSPTGGVYTVGDFMTRKENLHVVKPTTTVDEALETLVEHRITGFPVIDDDWK 125
Query: 23 LVGVVSD 3
LVG+VSD
Sbjct: 126 LVGLVSD 132
>gb|EOX91499.1| Cystathionine beta-synthase family protein isoform 1 [Theobroma
cacao]
Length = 241
Score = 100 bits (250), Expect = 2e-19
Identities = 49/67 (73%), Positives = 57/67 (85%), Gaps = 4/67 (5%)
Frame = -3
Query: 191 NGTVT----SQDNGFYTVGDFMTKKEDLHVVKPSTSVDEALELLVENRVTGFPVIDDDWN 24
NGT+T S G YTVGDFMT+KE+LHVVKP+T+VDEALE LVE+R+TGFPVIDDDW
Sbjct: 66 NGTLTANSVSPTGGVYTVGDFMTRKENLHVVKPTTTVDEALETLVEHRITGFPVIDDDWK 125
Query: 23 LVGVVSD 3
LVG+VSD
Sbjct: 126 LVGLVSD 132