BLASTX nr result
ID: Zingiber25_contig00028668
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00028668
(697 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002283507.1| PREDICTED: E3 ubiquitin-protein ligase RHA2A... 92 1e-16
ref|XP_006416944.1| hypothetical protein EUTSA_v10008995mg [Eutr... 89 1e-15
ref|XP_006303368.1| hypothetical protein CARUB_v10010511mg [Caps... 89 1e-15
ref|XP_002312419.1| RING-H2 zinc finger protein RHA2a [Populus t... 87 7e-15
ref|NP_172962.1| E3 ubiquitin-protein ligase RHA2A [Arabidopsis ... 86 9e-15
ref|XP_006468778.1| PREDICTED: E3 ubiquitin-protein ligase RHA2A... 84 4e-14
ref|XP_006448343.1| hypothetical protein CICLE_v10016906mg [Citr... 84 4e-14
gb|EXB65574.1| E3 ubiquitin-protein ligase RHA2A [Morus notabilis] 84 6e-14
gb|EOX99992.1| RING-H2 finger A2A, putative [Theobroma cacao] 83 7e-14
ref|XP_002892849.1| ring-H2 finger A2A [Arabidopsis lyrata subsp... 83 1e-13
ref|XP_002526304.1| conserved hypothetical protein [Ricinus comm... 82 1e-13
ref|XP_004300948.1| PREDICTED: E3 ubiquitin-protein ligase RHA2A... 82 2e-13
ref|XP_006344186.1| PREDICTED: E3 ubiquitin-protein ligase RHA2A... 80 6e-13
ref|XP_003536661.1| PREDICTED: E3 ubiquitin-protein ligase RHA2A... 80 8e-13
ref|XP_004239405.1| PREDICTED: E3 ubiquitin-protein ligase RHA2A... 79 1e-12
ref|XP_003638419.1| RING finger protein [Medicago truncatula] gi... 79 1e-12
gb|ESW14973.1| hypothetical protein PHAVU_007G033500g [Phaseolus... 78 3e-12
ref|XP_002314830.2| hypothetical protein POPTR_0010s12800g, part... 78 3e-12
gb|EMJ24790.1| hypothetical protein PRUPE_ppa012394mg [Prunus pe... 77 7e-12
ref|XP_004497019.1| PREDICTED: E3 ubiquitin-protein ligase RHA2A... 75 2e-11
>ref|XP_002283507.1| PREDICTED: E3 ubiquitin-protein ligase RHA2A-like [Vitis vinifera]
Length = 162
Score = 92.4 bits (228), Expect = 1e-16
Identities = 44/93 (47%), Positives = 57/93 (61%)
Frame = +2
Query: 215 DRLAADRAFPFLLSSRGEAEAPRPLCAVCLCDLADGDRVRRIPCGHVFHRDCLDGWLLQL 394
++L +R F + G A + C VCLC L DGD+VRR+ C HVFH++C DGWL L
Sbjct: 71 EQLNLNRVFSYRYGEDGGAASD---CVVCLCRLRDGDQVRRLACRHVFHKECFDGWLDHL 127
Query: 395 NLSCPLCRYRLVAPELRAAADRRIGAELVACLS 493
N +CPLCR LV+ E A RR+G +LV S
Sbjct: 128 NFNCPLCRSPLVSDERVALTQRRVGGDLVTWFS 160
>ref|XP_006416944.1| hypothetical protein EUTSA_v10008995mg [Eutrema salsugineum]
gi|557094715|gb|ESQ35297.1| hypothetical protein
EUTSA_v10008995mg [Eutrema salsugineum]
Length = 153
Score = 89.4 bits (220), Expect = 1e-15
Identities = 41/95 (43%), Positives = 56/95 (58%)
Frame = +2
Query: 215 DRLAADRAFPFLLSSRGEAEAPRPLCAVCLCDLADGDRVRRIPCGHVFHRDCLDGWLLQL 394
D+L +R F + G +E C VCL L +G+ VR++ C HVFH+ CL+GWL L
Sbjct: 64 DQLNLNRLFSYRCGDEGGSE-----CVVCLSKLKEGEEVRKLECRHVFHKQCLEGWLHHL 118
Query: 395 NLSCPLCRYRLVAPELRAAADRRIGAELVACLSHH 499
N CPLCR LVA + RR+G +L++C S H
Sbjct: 119 NFICPLCRSALVADGCVSRTQRRVGTDLISCFSLH 153
>ref|XP_006303368.1| hypothetical protein CARUB_v10010511mg [Capsella rubella]
gi|482572079|gb|EOA36266.1| hypothetical protein
CARUB_v10010511mg [Capsella rubella]
Length = 160
Score = 89.0 bits (219), Expect = 1e-15
Identities = 39/95 (41%), Positives = 57/95 (60%)
Frame = +2
Query: 215 DRLAADRAFPFLLSSRGEAEAPRPLCAVCLCDLADGDRVRRIPCGHVFHRDCLDGWLLQL 394
D+L+ +R F + + G C VCL L +G+ VR++ C HVFH+ CL+GWL L
Sbjct: 66 DQLSLNRLFSYRCDADGGGGGGGSDCVVCLSKLKEGEEVRKLECRHVFHKQCLEGWLHHL 125
Query: 395 NLSCPLCRYRLVAPELRAAADRRIGAELVACLSHH 499
N +CPLCR LV+ + RR+G +L++C S H
Sbjct: 126 NFTCPLCRSALVSDLSVSKTQRRVGTDLISCFSLH 160
>ref|XP_002312419.1| RING-H2 zinc finger protein RHA2a [Populus trichocarpa]
gi|222852239|gb|EEE89786.1| RING-H2 zinc finger protein
RHA2a [Populus trichocarpa]
Length = 168
Score = 86.7 bits (213), Expect = 7e-15
Identities = 37/68 (54%), Positives = 46/68 (67%)
Frame = +2
Query: 290 CAVCLCDLADGDRVRRIPCGHVFHRDCLDGWLLQLNLSCPLCRYRLVAPELRAAADRRIG 469
C VCLC L DGD+VR++ C HVFH++C DGWL LN +CPLCR+ LV+ E RR+G
Sbjct: 99 CVVCLCTLRDGDQVRKLDCRHVFHKECFDGWLDHLNFNCPLCRWPLVSDERVEETRRRVG 158
Query: 470 AELVACLS 493
LV S
Sbjct: 159 ENLVEWFS 166
>ref|NP_172962.1| E3 ubiquitin-protein ligase RHA2A [Arabidopsis thaliana]
gi|50401214|sp|Q9ZT50.1|RHA2A_ARATH RecName: Full=E3
ubiquitin-protein ligase RHA2A; AltName: Full=RING-H2
zinc finger protein RHA2a
gi|5103808|gb|AAD39638.1|AC007591_3 Identical to
gb|AF078822 RING-H2 finger RHA2a protein from
Arabidopsis thaliana. ESTs gb|N37587, gb|T04684,
gb|AA394318, gb|Z35014 and gb|AA713343 come from this
gene [Arabidopsis thaliana] gi|3790569|gb|AAC68671.1|
RING-H2 finger protein RHA2a [Arabidopsis thaliana]
gi|19715570|gb|AAL91611.1| At1g15100/F9L1_3 [Arabidopsis
thaliana] gi|20334914|gb|AAM16213.1| At1g15100/F9L1_3
[Arabidopsis thaliana] gi|21593875|gb|AAM65842.1|
putative RING-H2 zinc finger protein [Arabidopsis
thaliana] gi|66865898|gb|AAY57583.1| RING finger family
protein [Arabidopsis thaliana]
gi|332191143|gb|AEE29264.1| E3 ubiquitin-protein ligase
RHA2A [Arabidopsis thaliana]
Length = 155
Score = 86.3 bits (212), Expect = 9e-15
Identities = 38/95 (40%), Positives = 57/95 (60%)
Frame = +2
Query: 215 DRLAADRAFPFLLSSRGEAEAPRPLCAVCLCDLADGDRVRRIPCGHVFHRDCLDGWLLQL 394
D+L+ +R F + G + C VCL L +G+ VR++ C HVFH+ CL+GWL Q
Sbjct: 64 DQLSLNRLFSYRCGDGGGGGSD---CVVCLSKLKEGEEVRKLECRHVFHKKCLEGWLHQF 120
Query: 395 NLSCPLCRYRLVAPELRAAADRRIGAELVACLSHH 499
N +CPLCR LV+ + + R +G +L++C S H
Sbjct: 121 NFTCPLCRSALVSDDCVSKTQRSVGRDLISCFSLH 155
>ref|XP_006468778.1| PREDICTED: E3 ubiquitin-protein ligase RHA2A-like [Citrus sinensis]
Length = 179
Score = 84.0 bits (206), Expect = 4e-14
Identities = 36/68 (52%), Positives = 46/68 (67%)
Frame = +2
Query: 290 CAVCLCDLADGDRVRRIPCGHVFHRDCLDGWLLQLNLSCPLCRYRLVAPELRAAADRRIG 469
C VCLC L DG+ VR++ C HVFH+DCLDGWL LN +CPLCR +V+ E RR+G
Sbjct: 110 CMVCLCTLRDGELVRKLDCRHVFHKDCLDGWLHHLNFNCPLCRSPVVSEERVWNTRRRVG 169
Query: 470 AELVACLS 493
+L+ S
Sbjct: 170 GDLIQWFS 177
>ref|XP_006448343.1| hypothetical protein CICLE_v10016906mg [Citrus clementina]
gi|567912061|ref|XP_006448344.1| hypothetical protein
CICLE_v10016906mg [Citrus clementina]
gi|557550954|gb|ESR61583.1| hypothetical protein
CICLE_v10016906mg [Citrus clementina]
gi|557550955|gb|ESR61584.1| hypothetical protein
CICLE_v10016906mg [Citrus clementina]
Length = 178
Score = 84.0 bits (206), Expect = 4e-14
Identities = 36/68 (52%), Positives = 46/68 (67%)
Frame = +2
Query: 290 CAVCLCDLADGDRVRRIPCGHVFHRDCLDGWLLQLNLSCPLCRYRLVAPELRAAADRRIG 469
C VCLC L DG+ VR++ C HVFH+DCLDGWL LN +CPLCR +V+ E RR+G
Sbjct: 109 CMVCLCTLRDGELVRKLDCRHVFHKDCLDGWLHHLNFNCPLCRSPVVSEERVWNTRRRVG 168
Query: 470 AELVACLS 493
+L+ S
Sbjct: 169 GDLIQWFS 176
>gb|EXB65574.1| E3 ubiquitin-protein ligase RHA2A [Morus notabilis]
Length = 161
Score = 83.6 bits (205), Expect = 6e-14
Identities = 47/101 (46%), Positives = 58/101 (57%), Gaps = 8/101 (7%)
Frame = +2
Query: 215 DRLAADRAFPFLLSSRGEAEAPRPLCAVCLCDLADGDRVRRIPCGHVFHRDCLDGWLLQL 394
++L +R F + S G C VCL L GD+VRR+ C HVFH+DC DGWL L
Sbjct: 64 EQLNLNRVFSYRYSDGGAGGGSD--CVVCLSTLTPGDQVRRLSCRHVFHKDCFDGWLGHL 121
Query: 395 NLSCPLCRYRLVAPELRAAAD--------RRIGAELVACLS 493
N SCPLCR LV+ AAAD RR+G++LVA S
Sbjct: 122 NFSCPLCRSPLVS---AAAADESVELTRRRRVGSDLVAWFS 159
>gb|EOX99992.1| RING-H2 finger A2A, putative [Theobroma cacao]
Length = 164
Score = 83.2 bits (204), Expect = 7e-14
Identities = 35/68 (51%), Positives = 45/68 (66%)
Frame = +2
Query: 290 CAVCLCDLADGDRVRRIPCGHVFHRDCLDGWLLQLNLSCPLCRYRLVAPELRAAADRRIG 469
C VCLC L DG++VR++ C HVFH+DC DGWL LN +CPLCR L + RR+G
Sbjct: 95 CVVCLCTLRDGEQVRKLDCCHVFHKDCFDGWLDHLNFNCPLCRSPLKTDQRVKTTPRRVG 154
Query: 470 AELVACLS 493
+L+A S
Sbjct: 155 EDLLAWFS 162
>ref|XP_002892849.1| ring-H2 finger A2A [Arabidopsis lyrata subsp. lyrata]
gi|297338691|gb|EFH69108.1| ring-H2 finger A2A
[Arabidopsis lyrata subsp. lyrata]
Length = 146
Score = 82.8 bits (203), Expect = 1e-13
Identities = 37/88 (42%), Positives = 55/88 (62%)
Frame = +2
Query: 215 DRLAADRAFPFLLSSRGEAEAPRPLCAVCLCDLADGDRVRRIPCGHVFHRDCLDGWLLQL 394
D+L+ +R F + G ++ C VCL L +G+ VR++ C HVFH+ CL+GWL QL
Sbjct: 64 DQLSLNRLFSYRCGDGGGSD-----CVVCLSKLKEGEEVRKLECRHVFHKKCLEGWLHQL 118
Query: 395 NLSCPLCRYRLVAPELRAAADRRIGAEL 478
N +CPLCR LV+ + + RR+G +L
Sbjct: 119 NFTCPLCRSALVSDDCVSKTQRRVGRDL 146
>ref|XP_002526304.1| conserved hypothetical protein [Ricinus communis]
gi|223534385|gb|EEF36093.1| conserved hypothetical
protein [Ricinus communis]
Length = 183
Score = 82.4 bits (202), Expect = 1e-13
Identities = 35/68 (51%), Positives = 46/68 (67%)
Frame = +2
Query: 290 CAVCLCDLADGDRVRRIPCGHVFHRDCLDGWLLQLNLSCPLCRYRLVAPELRAAADRRIG 469
C VCLC L+DGD+VR++ C HVFH+DC D WL QL +CPLCR LV+ + + R+
Sbjct: 114 CVVCLCALSDGDQVRKLDCRHVFHKDCFDDWLRQLKFNCPLCRSPLVSGQRVLSTRSRVA 173
Query: 470 AELVACLS 493
+LVA S
Sbjct: 174 GDLVAWFS 181
>ref|XP_004300948.1| PREDICTED: E3 ubiquitin-protein ligase RHA2A-like [Fragaria vesca
subsp. vesca]
Length = 170
Score = 81.6 bits (200), Expect = 2e-13
Identities = 39/89 (43%), Positives = 50/89 (56%)
Frame = +2
Query: 215 DRLAADRAFPFLLSSRGEAEAPRPLCAVCLCDLADGDRVRRIPCGHVFHRDCLDGWLLQL 394
++L + F + E P C VCL + DGDRVR + C H+FH+ C DGWL QL
Sbjct: 74 EQLNLNSLFSYRYDHSRHREGAVPDCIVCLSAMKDGDRVRMLHCRHLFHKHCFDGWLDQL 133
Query: 395 NLSCPLCRYRLVAPELRAAADRRIGAELV 481
N SCP+CR LV E RR+G +LV
Sbjct: 134 NFSCPICRSPLVHEERVNQTRRRVGGDLV 162
>ref|XP_006344186.1| PREDICTED: E3 ubiquitin-protein ligase RHA2A-like [Solanum
tuberosum]
Length = 169
Score = 80.1 bits (196), Expect = 6e-13
Identities = 36/68 (52%), Positives = 44/68 (64%)
Frame = +2
Query: 290 CAVCLCDLADGDRVRRIPCGHVFHRDCLDGWLLQLNLSCPLCRYRLVAPELRAAADRRIG 469
C VCL L DGDRVR++ C HVFH +CLDGW LN +CPLCR V+ E A RR+
Sbjct: 100 CVVCLNRLGDGDRVRKLACRHVFHMECLDGWFNTLNFNCPLCRSTSVSGERVVRARRRVA 159
Query: 470 AELVACLS 493
+L+A S
Sbjct: 160 GDLLAWFS 167
>ref|XP_003536661.1| PREDICTED: E3 ubiquitin-protein ligase RHA2A-like [Glycine max]
Length = 169
Score = 79.7 bits (195), Expect = 8e-13
Identities = 34/70 (48%), Positives = 43/70 (61%)
Frame = +2
Query: 290 CAVCLCDLADGDRVRRIPCGHVFHRDCLDGWLLQLNLSCPLCRYRLVAPELRAAADRRIG 469
C VC DGD+VR +PC HVFHR C DGWL +CPLCR L + E A +RR+G
Sbjct: 100 CVVCQATFEDGDQVRMLPCRHVFHRRCFDGWLHHYKFNCPLCRSPLFSDERVALTERRLG 159
Query: 470 AELVACLSHH 499
+L++ S H
Sbjct: 160 QQLISWFSLH 169
>ref|XP_004239405.1| PREDICTED: E3 ubiquitin-protein ligase RHA2A-like [Solanum
lycopersicum]
Length = 171
Score = 79.3 bits (194), Expect = 1e-12
Identities = 36/68 (52%), Positives = 43/68 (63%)
Frame = +2
Query: 290 CAVCLCDLADGDRVRRIPCGHVFHRDCLDGWLLQLNLSCPLCRYRLVAPELRAAADRRIG 469
C VCL L DGDRVR++ C HVFH +CLDGW LN +CPLCR VA E RR+
Sbjct: 102 CVVCLNRLGDGDRVRKLACRHVFHTECLDGWFNTLNFNCPLCRSTSVAGERVVRERRRVA 161
Query: 470 AELVACLS 493
+L+A S
Sbjct: 162 GDLLAWFS 169
>ref|XP_003638419.1| RING finger protein [Medicago truncatula]
gi|355504354|gb|AES85557.1| RING finger protein
[Medicago truncatula] gi|388513305|gb|AFK44714.1|
unknown [Medicago truncatula]
Length = 164
Score = 79.0 bits (193), Expect = 1e-12
Identities = 35/90 (38%), Positives = 54/90 (60%)
Frame = +2
Query: 215 DRLAADRAFPFLLSSRGEAEAPRPLCAVCLCDLADGDRVRRIPCGHVFHRDCLDGWLLQL 394
D+L+ + F + A+ R C C + +GD VR++PC HVFHR CL+GW +
Sbjct: 72 DQLSLNNQFFYKYEDAASADNHR--CVFCQSNFENGDHVRKLPCRHVFHRHCLNGWFHRF 129
Query: 395 NLSCPLCRYRLVAPELRAAADRRIGAELVA 484
N +CPLCR L + E A +RR+G++L++
Sbjct: 130 NFNCPLCRCSLHSDERVALTERRVGSQLIS 159
>gb|ESW14973.1| hypothetical protein PHAVU_007G033500g [Phaseolus vulgaris]
Length = 161
Score = 77.8 bits (190), Expect = 3e-12
Identities = 32/70 (45%), Positives = 44/70 (62%)
Frame = +2
Query: 290 CAVCLCDLADGDRVRRIPCGHVFHRDCLDGWLLQLNLSCPLCRYRLVAPELRAAADRRIG 469
C VC DGD++R +PC HVFHR C DGWL +CPLCR L++ + A +RR+G
Sbjct: 92 CVVCQAAFQDGDQLRMLPCRHVFHRRCFDGWLHHYKFNCPLCRSPLLSDDRVALTERRLG 151
Query: 470 AELVACLSHH 499
+L++ S H
Sbjct: 152 QQLISWFSLH 161
>ref|XP_002314830.2| hypothetical protein POPTR_0010s12800g, partial [Populus
trichocarpa] gi|550329677|gb|EEF01001.2| hypothetical
protein POPTR_0010s12800g, partial [Populus trichocarpa]
Length = 135
Score = 77.8 bits (190), Expect = 3e-12
Identities = 31/50 (62%), Positives = 38/50 (76%)
Frame = +2
Query: 290 CAVCLCDLADGDRVRRIPCGHVFHRDCLDGWLLQLNLSCPLCRYRLVAPE 439
C VCLC L GD+VRR+ C HVFH++C DGWL LN +CPLCR+ LV+ E
Sbjct: 85 CVVCLCTLRHGDQVRRLDCCHVFHKECFDGWLDHLNFNCPLCRWPLVSDE 134
>gb|EMJ24790.1| hypothetical protein PRUPE_ppa012394mg [Prunus persica]
Length = 171
Score = 76.6 bits (187), Expect = 7e-12
Identities = 33/64 (51%), Positives = 43/64 (67%)
Frame = +2
Query: 290 CAVCLCDLADGDRVRRIPCGHVFHRDCLDGWLLQLNLSCPLCRYRLVAPELRAAADRRIG 469
C VCL L DGD+VR + C H+FH+ C DGWL LN +CP+CR LV +L A RR+
Sbjct: 102 CVVCLSTLRDGDQVRMLNCRHLFHKSCFDGWLDHLNFNCPICRSPLVHRDLVAHRGRRLA 161
Query: 470 AELV 481
A+L+
Sbjct: 162 ADLL 165
>ref|XP_004497019.1| PREDICTED: E3 ubiquitin-protein ligase RHA2A-like [Cicer arietinum]
Length = 164
Score = 75.5 bits (184), Expect = 2e-11
Identities = 35/93 (37%), Positives = 50/93 (53%)
Frame = +2
Query: 215 DRLAADRAFPFLLSSRGEAEAPRPLCAVCLCDLADGDRVRRIPCGHVFHRDCLDGWLLQL 394
D+L + F + +E R C C +GD VR +PC HVFHR CL+GW +
Sbjct: 72 DQLTLNNQFYYTYEDAASSENHR--CVFCQATFENGDHVRMLPCRHVFHRHCLNGWFHRY 129
Query: 395 NLSCPLCRYRLVAPELRAAADRRIGAELVACLS 493
+CPLCR L + E A +RR+G +L++ S
Sbjct: 130 KFNCPLCRSPLFSDERVALTERRVGRQLISWFS 162