BLASTX nr result
ID: Zingiber25_contig00028647
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00028647
(1056 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002276964.1| PREDICTED: peptide deformylase 1B, chloropla... 326 1e-86
ref|XP_002521451.1| polypeptide deformylase, putative [Ricinus c... 324 3e-86
gb|EOY02424.1| Polypeptide deformylase, putative isoform 1 [Theo... 323 5e-86
ref|XP_004306350.1| PREDICTED: peptide deformylase 1B, chloropla... 323 5e-86
ref|XP_004158319.1| PREDICTED: peptide deformylase 1B, chloropla... 323 9e-86
ref|XP_002300047.2| hypothetical protein POPTR_0001s35190g [Popu... 320 5e-85
ref|XP_006470303.1| PREDICTED: peptide deformylase 1B, chloropla... 319 1e-84
gb|EOY02428.1| Polypeptide deformylase, putative isoform 5 [Theo... 319 1e-84
gb|EMJ17002.1| hypothetical protein PRUPE_ppa009947mg [Prunus pe... 318 2e-84
ref|XP_006840722.1| hypothetical protein AMTR_s00096p00105910 [A... 316 9e-84
ref|XP_006369928.1| hypothetical protein POPTR_0001s35190g [Popu... 315 1e-83
ref|XP_006446529.1| hypothetical protein CICLE_v10016231mg [Citr... 313 7e-83
ref|NP_001043669.1| Os01g0637600 [Oryza sativa Japonica Group] g... 305 2e-80
ref|XP_004969271.1| PREDICTED: peptide deformylase 1B, chloropla... 304 3e-80
gb|EXC20304.1| Peptide deformylase 1B [Morus notabilis] 303 6e-80
ref|XP_002458212.1| hypothetical protein SORBIDRAFT_03g029040 [S... 303 6e-80
ref|XP_006338575.1| PREDICTED: peptide deformylase 1B, chloropla... 302 1e-79
gb|ESW24670.1| hypothetical protein PHAVU_004G149800g [Phaseolus... 302 2e-79
ref|NP_001234441.1| peptide deformylase 1B, chloroplastic [Solan... 300 5e-79
dbj|BAJ91971.1| predicted protein [Hordeum vulgare subsp. vulgare] 299 1e-78
>ref|XP_002276964.1| PREDICTED: peptide deformylase 1B, chloroplastic [Vitis vinifera]
gi|296087647|emb|CBI34903.3| unnamed protein product
[Vitis vinifera]
Length = 275
Score = 326 bits (835), Expect = 1e-86
Identities = 160/225 (71%), Positives = 188/225 (83%)
Frame = -3
Query: 871 PFADVSVQARRGPSSQVEDLASPADLCFESPLKIVEYPDPILRARNKRISAFDENLRKLV 692
P V VQA+RG S + E +ASPADL FE+PLKIVEYPDPILRA+NK IS FD+NL+KLV
Sbjct: 52 PLMQVQVQAKRGFSFKEEVIASPADLSFEAPLKIVEYPDPILRAKNKLISTFDDNLKKLV 111
Query: 691 DEMFDIMYKTDGVGLSAPQVGVNVQLMVFNPAGERGEGEEIVLVNPKMYKASTRTFFYNE 512
DEMFD+MYKTDG+GLSAPQVG+NVQLMVFNP GERGEGEEIVLVNP++ K S + +NE
Sbjct: 112 DEMFDVMYKTDGIGLSAPQVGINVQLMVFNPVGERGEGEEIVLVNPRVNKYSKKIVLFNE 171
Query: 511 GCLSFPGIYADVERPASIKVDARDINGARFRVNLSGLPARIFQHEFDHLQGILFFDRMTE 332
GCLSFPGIYADVERP S+K+DARDI GARF +NLSGLPAR+FQHEFDHLQG LFFDRMTE
Sbjct: 172 GCLSFPGIYADVERPESVKIDARDITGARFMINLSGLPARVFQHEFDHLQGTLFFDRMTE 231
Query: 331 DVLETIRSQLKLLEKKYENTTGLESPESIDKNISGQRKEIAGFAQ 197
+VL++I + L+ LE+KYE+ TG SPE I+ +RK AGF +
Sbjct: 232 EVLDSIHANLQDLERKYEDRTGFPSPERIETR--KRRKVAAGFGK 274
>ref|XP_002521451.1| polypeptide deformylase, putative [Ricinus communis]
gi|223539350|gb|EEF40941.1| polypeptide deformylase,
putative [Ricinus communis]
Length = 282
Score = 324 bits (831), Expect = 3e-86
Identities = 157/236 (66%), Positives = 193/236 (81%)
Frame = -3
Query: 904 SSQPLAVVRDSPFADVSVQARRGPSSQVEDLASPADLCFESPLKIVEYPDPILRARNKRI 725
S+ + + P V QA+R S + E++A+PADLCFE PLKIVEYPDPILR +NKRI
Sbjct: 48 STARFSSIAKPPSIPVRAQAKRSFSFKEEEIATPADLCFEEPLKIVEYPDPILRRKNKRI 107
Query: 724 SAFDENLRKLVDEMFDIMYKTDGVGLSAPQVGVNVQLMVFNPAGERGEGEEIVLVNPKMY 545
FD+NL+KLVDEMFD+MYKTDG+GLSAPQVG+NVQLMVFNP GERGEGEEIVL+NP++
Sbjct: 108 DTFDDNLKKLVDEMFDVMYKTDGIGLSAPQVGINVQLMVFNPVGERGEGEEIVLINPRLN 167
Query: 544 KASTRTFFYNEGCLSFPGIYADVERPASIKVDARDINGARFRVNLSGLPARIFQHEFDHL 365
K S + +NEGCLSFPGIYADV RP S+K+DARDINGARF VNLSGLPAR+FQHE+DHL
Sbjct: 168 KYSKKIVPFNEGCLSFPGIYADVLRPESVKIDARDINGARFTVNLSGLPARVFQHEYDHL 227
Query: 364 QGILFFDRMTEDVLETIRSQLKLLEKKYENTTGLESPESIDKNISGQRKEIAGFAQ 197
+GILFFDRMT++VL++IR+QL+ LEKK+E+ TG SPE I+ + +K AGF +
Sbjct: 228 EGILFFDRMTDEVLDSIRAQLQALEKKFEDKTGYASPEKIETRKT--KKAAAGFGK 281
>gb|EOY02424.1| Polypeptide deformylase, putative isoform 1 [Theobroma cacao]
gi|508710528|gb|EOY02425.1| Polypeptide deformylase,
putative isoform 1 [Theobroma cacao]
gi|508710529|gb|EOY02426.1| Polypeptide deformylase,
putative isoform 1 [Theobroma cacao]
gi|508710530|gb|EOY02427.1| Polypeptide deformylase,
putative isoform 1 [Theobroma cacao]
Length = 278
Score = 323 bits (829), Expect = 5e-86
Identities = 161/221 (72%), Positives = 188/221 (85%)
Frame = -3
Query: 859 VSVQARRGPSSQVEDLASPADLCFESPLKIVEYPDPILRARNKRISAFDENLRKLVDEMF 680
V QA+RG S+ +++AS DL F+SPLKIVEYPDPILR RNKRI FDENL+KLVDEMF
Sbjct: 59 VHAQAKRGFLSKDDEVASMEDLRFDSPLKIVEYPDPILRKRNKRIDTFDENLKKLVDEMF 118
Query: 679 DIMYKTDGVGLSAPQVGVNVQLMVFNPAGERGEGEEIVLVNPKMYKASTRTFFYNEGCLS 500
D+MYKTDG+GLSAPQVGVNVQLMVFNP GERGEG+EIVLVNP++ K S +T +NEGCLS
Sbjct: 119 DVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGQEIVLVNPRVNKYSKKTVLFNEGCLS 178
Query: 499 FPGIYADVERPASIKVDARDINGARFRVNLSGLPARIFQHEFDHLQGILFFDRMTEDVLE 320
FP IYADVERP SIK+DARD+NGARF VNLSGL ARIFQHEFDHLQGILFFDRMT +VL+
Sbjct: 179 FPRIYADVERPESIKIDARDVNGARFTVNLSGLRARIFQHEFDHLQGILFFDRMTGEVLD 238
Query: 319 TIRSQLKLLEKKYENTTGLESPESIDKNISGQRKEIAGFAQ 197
+IR+QL+ LEKKYE+TTGL SPE ++ ++K AGF +
Sbjct: 239 SIRAQLEALEKKYEDTTGLPSPEKVE--TQKRKKAAAGFGK 277
>ref|XP_004306350.1| PREDICTED: peptide deformylase 1B, chloroplastic-like [Fragaria
vesca subsp. vesca]
Length = 275
Score = 323 bits (829), Expect = 5e-86
Identities = 160/237 (67%), Positives = 193/237 (81%)
Frame = -3
Query: 907 FSSQPLAVVRDSPFADVSVQARRGPSSQVEDLASPADLCFESPLKIVEYPDPILRARNKR 728
FSS + + F V QA+RG S + + +AS AD+ FE+PL+IVEYPDPILRA+NKR
Sbjct: 38 FSSADRPLSTANRFTAVRAQAKRGFSLKEDQVASAADVEFETPLEIVEYPDPILRAKNKR 97
Query: 727 ISAFDENLRKLVDEMFDIMYKTDGVGLSAPQVGVNVQLMVFNPAGERGEGEEIVLVNPKM 548
+ FD+NL+KLV+EMFDIMY+TDG+GLSAPQVG+NVQLMVFNP GERGEGEEIVLVNP++
Sbjct: 98 LDTFDDNLKKLVEEMFDIMYRTDGIGLSAPQVGINVQLMVFNPVGERGEGEEIVLVNPRV 157
Query: 547 YKASTRTFFYNEGCLSFPGIYADVERPASIKVDARDINGARFRVNLSGLPARIFQHEFDH 368
+ S +T +NEGCLSFPGIYADV+RP S+K+DARDI+GARF VNLSGLPAR+FQHEFDH
Sbjct: 158 SRYSQKTRLFNEGCLSFPGIYADVQRPESVKIDARDISGARFTVNLSGLPARVFQHEFDH 217
Query: 367 LQGILFFDRMTEDVLETIRSQLKLLEKKYENTTGLESPESIDKNISGQRKEIAGFAQ 197
LQGILFFDRMTE VLE+I QL+ LEKKYE+ TGL SPE I+ + K AGF +
Sbjct: 218 LQGILFFDRMTEGVLESISEQLQALEKKYEDKTGLPSPERIESRKRMKLKAAAGFGK 274
>ref|XP_004158319.1| PREDICTED: peptide deformylase 1B, chloroplastic-like [Cucumis
sativus]
Length = 273
Score = 323 bits (827), Expect = 9e-86
Identities = 168/244 (68%), Positives = 195/244 (79%), Gaps = 4/244 (1%)
Frame = -3
Query: 916 LRGFSSQPLAVVRDSPFADVSV----QARRGPSSQVEDLASPADLCFESPLKIVEYPDPI 749
L GFSS S F S QA+RG S++ +D+AS DL FE+PLKIVEYPDPI
Sbjct: 32 LSGFSSTCKLFSHSSKFKAPSTLVYAQAKRGFSAKEDDVASSVDLEFEAPLKIVEYPDPI 91
Query: 748 LRARNKRISAFDENLRKLVDEMFDIMYKTDGVGLSAPQVGVNVQLMVFNPAGERGEGEEI 569
LRA+NKRI +FD+NL+KLV EMFD+MYKTDG+GLSAPQVGVNVQLMVFN GERGEGEEI
Sbjct: 92 LRAKNKRIGSFDDNLKKLVQEMFDVMYKTDGIGLSAPQVGVNVQLMVFNSVGERGEGEEI 151
Query: 568 VLVNPKMYKASTRTFFYNEGCLSFPGIYADVERPASIKVDARDINGARFRVNLSGLPARI 389
VLVNPK+Y+ S +T +NEGCLSFP IYADVERP SIK+DARDI+G RF VNLSGL AR+
Sbjct: 152 VLVNPKVYRYSKKTVLFNEGCLSFPMIYADVERPESIKIDARDISGTRFMVNLSGLSARV 211
Query: 388 FQHEFDHLQGILFFDRMTEDVLETIRSQLKLLEKKYENTTGLESPESIDKNISGQRKEIA 209
FQHEFDHLQG LFFDRMT++VLETIR QL+ LEKKYE+ TGL SPE I+ + +RK A
Sbjct: 212 FQHEFDHLQGTLFFDRMTDEVLETIRPQLQALEKKYEDRTGLPSPERIE---NFRRKVGA 268
Query: 208 GFAQ 197
GF +
Sbjct: 269 GFGK 272
>ref|XP_002300047.2| hypothetical protein POPTR_0001s35190g [Populus trichocarpa]
gi|566152890|ref|XP_006369926.1| hypothetical protein
POPTR_0001s35190g [Populus trichocarpa]
gi|566152892|ref|XP_006369927.1| hypothetical protein
POPTR_0001s35190g [Populus trichocarpa]
gi|550348928|gb|EEE84852.2| hypothetical protein
POPTR_0001s35190g [Populus trichocarpa]
gi|550348929|gb|ERP66495.1| hypothetical protein
POPTR_0001s35190g [Populus trichocarpa]
gi|550348930|gb|ERP66496.1| hypothetical protein
POPTR_0001s35190g [Populus trichocarpa]
Length = 268
Score = 320 bits (821), Expect = 5e-85
Identities = 165/264 (62%), Positives = 203/264 (76%), Gaps = 8/264 (3%)
Frame = -3
Query: 964 SSCFPRSFPFPYSGAALRGFSSQPLAVVRDS--------PFADVSVQARRGPSSQVEDLA 809
SS R+ PY + + +P+ + R S P V QA+RGP + + +A
Sbjct: 7 SSSLSRALLLPYLHSRTQTLC-EPIRLARFSSTMKQPRPPSLFVRSQAKRGPFLKQDQVA 65
Query: 808 SPADLCFESPLKIVEYPDPILRARNKRISAFDENLRKLVDEMFDIMYKTDGVGLSAPQVG 629
+ +DL FE+PLKIVEYPDPILRA+NKRI +FD+NL+KLVDEMFD+MYKTDG+GLSAPQVG
Sbjct: 66 ATSDLEFEAPLKIVEYPDPILRAKNKRIDSFDDNLKKLVDEMFDVMYKTDGIGLSAPQVG 125
Query: 628 VNVQLMVFNPAGERGEGEEIVLVNPKMYKASTRTFFYNEGCLSFPGIYADVERPASIKVD 449
+NVQLMVFNPA E GEG+EIVLVNP++ K S +T +NEGCLSFPGIYADV+RP S+K+D
Sbjct: 126 INVQLMVFNPADEHGEGDEIVLVNPRVNKYSKKTVLFNEGCLSFPGIYADVKRPESVKID 185
Query: 448 ARDINGARFRVNLSGLPARIFQHEFDHLQGILFFDRMTEDVLETIRSQLKLLEKKYENTT 269
ARDINGARF VNLSGLPAR+FQHEFDHLQGILFFDRMTE+VL++IR L+ LEKKYE+ T
Sbjct: 186 ARDINGARFTVNLSGLPARVFQHEFDHLQGILFFDRMTEEVLDSIRPGLQALEKKYEDKT 245
Query: 268 GLESPESIDKNISGQRKEIAGFAQ 197
G SPE I+ + +K AGF +
Sbjct: 246 GFPSPERIETH--RLKKVAAGFGK 267
>ref|XP_006470303.1| PREDICTED: peptide deformylase 1B, chloroplastic-like isoform X1
[Citrus sinensis] gi|568832146|ref|XP_006470304.1|
PREDICTED: peptide deformylase 1B, chloroplastic-like
isoform X2 [Citrus sinensis]
gi|568832148|ref|XP_006470305.1| PREDICTED: peptide
deformylase 1B, chloroplastic-like isoform X3 [Citrus
sinensis]
Length = 282
Score = 319 bits (817), Expect = 1e-84
Identities = 157/216 (72%), Positives = 184/216 (85%)
Frame = -3
Query: 844 RRGPSSQVEDLASPADLCFESPLKIVEYPDPILRARNKRISAFDENLRKLVDEMFDIMYK 665
R G S++ + +ASPADL FE PLKIVEYPDPILRA+NKRI FD+NL+KLVDEMFD MYK
Sbjct: 68 RYGFSTKEDPVASPADLRFERPLKIVEYPDPILRAKNKRIDTFDDNLKKLVDEMFDFMYK 127
Query: 664 TDGVGLSAPQVGVNVQLMVFNPAGERGEGEEIVLVNPKMYKASTRTFFYNEGCLSFPGIY 485
TDG+GLSAPQVG+NVQLMVFNP GERGEGEEIVLVNP++ K S + Y EGCLSFPGI+
Sbjct: 128 TDGIGLSAPQVGINVQLMVFNPVGERGEGEEIVLVNPRVNKYSNKMIPYEEGCLSFPGIH 187
Query: 484 ADVERPASIKVDARDINGARFRVNLSGLPARIFQHEFDHLQGILFFDRMTEDVLETIRSQ 305
ADVERP S+K+DARDINGARF V+LS LPAR+FQHEFDHLQGILFF+RMT+DVL++IR Q
Sbjct: 188 ADVERPESVKIDARDINGARFSVSLSDLPARVFQHEFDHLQGILFFERMTDDVLDSIREQ 247
Query: 304 LKLLEKKYENTTGLESPESIDKNISGQRKEIAGFAQ 197
L+ LEKKYE+ TGL+SPE I+ S +RK GF +
Sbjct: 248 LEALEKKYEDKTGLQSPEKIE--ASKRRKAAVGFGK 281
>gb|EOY02428.1| Polypeptide deformylase, putative isoform 5 [Theobroma cacao]
Length = 279
Score = 319 bits (817), Expect = 1e-84
Identities = 161/222 (72%), Positives = 188/222 (84%), Gaps = 1/222 (0%)
Frame = -3
Query: 859 VSVQARRGPSSQVEDLASPADLCFESPLKIVEYPDPILRARNKRISAFDENLRKLVDEMF 680
V QA+RG S+ +++AS DL F+SPLKIVEYPDPILR RNKRI FDENL+KLVDEMF
Sbjct: 59 VHAQAKRGFLSKDDEVASMEDLRFDSPLKIVEYPDPILRKRNKRIDTFDENLKKLVDEMF 118
Query: 679 DIMYKTDGVGLSAPQVGVNVQLMVFNPAGERGEGEEIVLVNPKMYKASTRTFFYNEGCLS 500
D+MYKTDG+GLSAPQVGVNVQLMVFNP GERGEG+EIVLVNP++ K S +T +NEGCLS
Sbjct: 119 DVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGQEIVLVNPRVNKYSKKTVLFNEGCLS 178
Query: 499 FPGIYADVERPASIKVDARDINGARFRVNLSGLPARIFQHEFDHL-QGILFFDRMTEDVL 323
FP IYADVERP SIK+DARD+NGARF VNLSGL ARIFQHEFDHL QGILFFDRMT +VL
Sbjct: 179 FPRIYADVERPESIKIDARDVNGARFTVNLSGLRARIFQHEFDHLQQGILFFDRMTGEVL 238
Query: 322 ETIRSQLKLLEKKYENTTGLESPESIDKNISGQRKEIAGFAQ 197
++IR+QL+ LEKKYE+TTGL SPE ++ ++K AGF +
Sbjct: 239 DSIRAQLEALEKKYEDTTGLPSPEKVE--TQKRKKAAAGFGK 278
>gb|EMJ17002.1| hypothetical protein PRUPE_ppa009947mg [Prunus persica]
Length = 271
Score = 318 bits (816), Expect = 2e-84
Identities = 163/231 (70%), Positives = 189/231 (81%)
Frame = -3
Query: 937 FPYSGAALRGFSSQPLAVVRDSPFADVSVQARRGPSSQVEDLASPADLCFESPLKIVEYP 758
FP L FSS V + V QA+RG S + +++A+ AD+ FE+PLKIVEYP
Sbjct: 26 FPPIFHRLTRFSSTVRLVSTMNRSTPVHAQAKRGFSVKEDEVATAADVEFETPLKIVEYP 85
Query: 757 DPILRARNKRISAFDENLRKLVDEMFDIMYKTDGVGLSAPQVGVNVQLMVFNPAGERGEG 578
DPILRA+NKRI +FDENL+ LVDEMFDIMYKTDG+GLSAPQVG+NVQLMVFNP GERGEG
Sbjct: 86 DPILRAKNKRIDSFDENLKILVDEMFDIMYKTDGIGLSAPQVGINVQLMVFNPVGERGEG 145
Query: 577 EEIVLVNPKMYKASTRTFFYNEGCLSFPGIYADVERPASIKVDARDINGARFRVNLSGLP 398
EEIVLVNP++ + S +T +NEGCLSFPGIYADV RP S+K+DARDINGARF VNLSGLP
Sbjct: 146 EEIVLVNPRVSRYSQKTRPFNEGCLSFPGIYADVVRPESVKIDARDINGARFTVNLSGLP 205
Query: 397 ARIFQHEFDHLQGILFFDRMTEDVLETIRSQLKLLEKKYENTTGLESPESI 245
AR+FQHEFDHLQGILFFDRM+E VLETI +QL+ LEKKYE+ TGL SPE I
Sbjct: 206 ARVFQHEFDHLQGILFFDRMSEGVLETICAQLQTLEKKYEDKTGLPSPERI 256
>ref|XP_006840722.1| hypothetical protein AMTR_s00096p00105910 [Amborella trichopoda]
gi|548842467|gb|ERN02397.1| hypothetical protein
AMTR_s00096p00105910 [Amborella trichopoda]
Length = 273
Score = 316 bits (810), Expect = 9e-84
Identities = 155/217 (71%), Positives = 183/217 (84%)
Frame = -3
Query: 853 VQARRGPSSQVEDLASPADLCFESPLKIVEYPDPILRARNKRISAFDENLRKLVDEMFDI 674
+QARR + + +A+PADL +E+PLKIVEYPDP LR RNKR+S FDENL++LV EMFD+
Sbjct: 56 MQARREFCLEEDGIATPADLSYEAPLKIVEYPDPRLRVRNKRVSVFDENLKELVAEMFDV 115
Query: 673 MYKTDGVGLSAPQVGVNVQLMVFNPAGERGEGEEIVLVNPKMYKASTRTFFYNEGCLSFP 494
MYKTDG+GLSAPQVG+NVQLMVFNPAGERGEGEE+VL+NPK+YK S + ++EGCLSFP
Sbjct: 116 MYKTDGIGLSAPQVGINVQLMVFNPAGERGEGEELVLINPKVYKYSKKLVLFDEGCLSFP 175
Query: 493 GIYADVERPASIKVDARDINGARFRVNLSGLPARIFQHEFDHLQGILFFDRMTEDVLETI 314
GIYADVERP S+K+DARDI GA+F V+L GLPAR+FQHEFDHLQGILFF+RMTE+VLE+I
Sbjct: 176 GIYADVERPTSVKIDARDITGAKFSVHLKGLPARVFQHEFDHLQGILFFERMTEEVLESI 235
Query: 313 RSQLKLLEKKYENTTGLESPESIDKNISGQRKEIAGF 203
R L+ LEKKYE TGL SPESI K K IAGF
Sbjct: 236 RPGLQALEKKYETLTGLPSPESITKRQG--IKAIAGF 270
>ref|XP_006369928.1| hypothetical protein POPTR_0001s35190g [Populus trichocarpa]
gi|550348931|gb|ERP66497.1| hypothetical protein
POPTR_0001s35190g [Populus trichocarpa]
Length = 269
Score = 315 bits (808), Expect = 1e-83
Identities = 165/265 (62%), Positives = 202/265 (76%), Gaps = 9/265 (3%)
Frame = -3
Query: 964 SSCFPRSFPFPYSGAALRGFSSQPLAVVRDS--------PFADVSVQARRGPSSQVEDLA 809
SS R+ PY + + +P+ + R S P V QA+RGP + + +A
Sbjct: 7 SSSLSRALLLPYLHSRTQTLC-EPIRLARFSSTMKQPRPPSLFVRSQAKRGPFLKQDQVA 65
Query: 808 SPA-DLCFESPLKIVEYPDPILRARNKRISAFDENLRKLVDEMFDIMYKTDGVGLSAPQV 632
+ DL FE+PLKIVEYPDPILRA+NKRI +FD+NL+KLVDEMFD+MYKTDG+GLSAPQV
Sbjct: 66 ATTGDLEFEAPLKIVEYPDPILRAKNKRIDSFDDNLKKLVDEMFDVMYKTDGIGLSAPQV 125
Query: 631 GVNVQLMVFNPAGERGEGEEIVLVNPKMYKASTRTFFYNEGCLSFPGIYADVERPASIKV 452
G+NVQLMVFNPA E GEG+EIVLVNP++ K S +T +NEGCLSFPGIYADV+RP S+K+
Sbjct: 126 GINVQLMVFNPADEHGEGDEIVLVNPRVNKYSKKTVLFNEGCLSFPGIYADVKRPESVKI 185
Query: 451 DARDINGARFRVNLSGLPARIFQHEFDHLQGILFFDRMTEDVLETIRSQLKLLEKKYENT 272
DARDINGARF VNLSGLPAR+FQHEFDHLQGILFFDRMTE+VL++IR L+ LEKKYE+
Sbjct: 186 DARDINGARFTVNLSGLPARVFQHEFDHLQGILFFDRMTEEVLDSIRPGLQALEKKYEDK 245
Query: 271 TGLESPESIDKNISGQRKEIAGFAQ 197
TG SPE I+ + +K AGF +
Sbjct: 246 TGFPSPERIETH--RLKKVAAGFGK 268
>ref|XP_006446529.1| hypothetical protein CICLE_v10016231mg [Citrus clementina]
gi|567908433|ref|XP_006446530.1| hypothetical protein
CICLE_v10016231mg [Citrus clementina]
gi|567908435|ref|XP_006446531.1| hypothetical protein
CICLE_v10016231mg [Citrus clementina]
gi|557549140|gb|ESR59769.1| hypothetical protein
CICLE_v10016231mg [Citrus clementina]
gi|557549141|gb|ESR59770.1| hypothetical protein
CICLE_v10016231mg [Citrus clementina]
gi|557549142|gb|ESR59771.1| hypothetical protein
CICLE_v10016231mg [Citrus clementina]
Length = 274
Score = 313 bits (802), Expect = 7e-83
Identities = 155/216 (71%), Positives = 181/216 (83%)
Frame = -3
Query: 844 RRGPSSQVEDLASPADLCFESPLKIVEYPDPILRARNKRISAFDENLRKLVDEMFDIMYK 665
R G S++ + +ASPADL FE PLKIVEYPDPILRA+NKRI FD NL+KLVDEMFD+MYK
Sbjct: 60 RYGFSTKEDSVASPADLRFERPLKIVEYPDPILRAKNKRIDTFDYNLKKLVDEMFDVMYK 119
Query: 664 TDGVGLSAPQVGVNVQLMVFNPAGERGEGEEIVLVNPKMYKASTRTFFYNEGCLSFPGIY 485
TDG+GLSAPQVG+NVQLMVFNP GERGEGEEIVLVNP++ K S + Y EGCLSFPGI+
Sbjct: 120 TDGIGLSAPQVGINVQLMVFNPVGERGEGEEIVLVNPRVNKYSNKMIPYEEGCLSFPGIH 179
Query: 484 ADVERPASIKVDARDINGARFRVNLSGLPARIFQHEFDHLQGILFFDRMTEDVLETIRSQ 305
ADVERP S+K+DARDINGARF V+LS LPAR+FQHEFDHLQGILFF+RMT DVL+ I+ Q
Sbjct: 180 ADVERPESVKIDARDINGARFSVSLSDLPARVFQHEFDHLQGILFFERMTGDVLDGIQEQ 239
Query: 304 LKLLEKKYENTTGLESPESIDKNISGQRKEIAGFAQ 197
L+ LEKKYE+ TGL+SPE I+ +RK GF +
Sbjct: 240 LEALEKKYEDKTGLQSPEKIEAR--KRRKAAVGFGK 273
>ref|NP_001043669.1| Os01g0637600 [Oryza sativa Japonica Group]
gi|75251983|sp|Q5VNN5.1|DEF1B_ORYSJ RecName:
Full=Peptide deformylase 1B, chloroplastic;
Short=OsPDF1B; Short=PDF 1B; Flags: Precursor
gi|55297005|dbj|BAD68576.1| putative polygalacturonase
[Oryza sativa Japonica Group]
gi|55297594|dbj|BAD68940.1| putative polygalacturonase
[Oryza sativa Japonica Group]
gi|113533200|dbj|BAF05583.1| Os01g0637600 [Oryza sativa
Japonica Group] gi|164633054|gb|ABY64740.1| peptide
deformylase 1B1 [Oryza sativa Japonica Group]
gi|215741408|dbj|BAG97903.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 269
Score = 305 bits (781), Expect = 2e-80
Identities = 161/262 (61%), Positives = 195/262 (74%), Gaps = 19/262 (7%)
Frame = -3
Query: 925 GAALRGFSSQPLAVVRDSPFAD-----------VSVQARRG--------PSSQVEDLASP 803
G LRGF+S ++ P A + +ARRG P ++ ED A+
Sbjct: 10 GPRLRGFASSFAPLLAAHPRALPLSRMGSVAPLAAARARRGFGSAVATAPPAEDEDFATA 69
Query: 802 ADLCFESPLKIVEYPDPILRARNKRISAFDENLRKLVDEMFDIMYKTDGVGLSAPQVGVN 623
ADL FE PLK+V+YPDPILRARNKRI+ FD+NLR L DEMFD+MYKTDG+GLSAPQVGVN
Sbjct: 70 ADLQFEPPLKVVKYPDPILRARNKRINTFDDNLRSLTDEMFDVMYKTDGIGLSAPQVGVN 129
Query: 622 VQLMVFNPAGERGEGEEIVLVNPKMYKASTRTFFYNEGCLSFPGIYADVERPASIKVDAR 443
VQLMVFNPAG +GEGEEIVLVNP +YK S R Y EGCLSFPGIYA+V RP ++K+DA+
Sbjct: 130 VQLMVFNPAGVKGEGEEIVLVNPVVYKMSKRLLVYEEGCLSFPGIYANVVRPDNVKIDAQ 189
Query: 442 DINGARFRVNLSGLPARIFQHEFDHLQGILFFDRMTEDVLETIRSQLKLLEKKYENTTGL 263
D+ GA+ +V LSGL AR+FQHEFDHLQGILFFDRM+ DVLE++R LK LEKKYE +TGL
Sbjct: 190 DVTGAKIKVKLSGLSARVFQHEFDHLQGILFFDRMSLDVLESVREGLKDLEKKYEESTGL 249
Query: 262 ESPESIDKNISGQRKEIAGFAQ 197
SPESI+ N G RK++ F++
Sbjct: 250 VSPESIE-NYKG-RKDLISFSR 269
>ref|XP_004969271.1| PREDICTED: peptide deformylase 1B, chloroplastic-like [Setaria
italica]
Length = 270
Score = 304 bits (779), Expect = 3e-80
Identities = 152/241 (63%), Positives = 189/241 (78%), Gaps = 8/241 (3%)
Frame = -3
Query: 895 PLAVVRDSPFADVSVQARRG--------PSSQVEDLASPADLCFESPLKIVEYPDPILRA 740
P ++ R P ++ +ARRG P ++ +D A+ ADL FE PL++V+YPDPILRA
Sbjct: 32 PPSLRRAGPAMPLAARARRGLSSSTAAAPPAEDDDFATAADLRFEPPLQVVKYPDPILRA 91
Query: 739 RNKRISAFDENLRKLVDEMFDIMYKTDGVGLSAPQVGVNVQLMVFNPAGERGEGEEIVLV 560
RNKRI+ FD NLR L DEMFD+MYKTDG+GLSAPQVGVNVQLMVFNPAG +GEGEEIVLV
Sbjct: 92 RNKRINTFDTNLRALADEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPAGVKGEGEEIVLV 151
Query: 559 NPKMYKASTRTFFYNEGCLSFPGIYADVERPASIKVDARDINGARFRVNLSGLPARIFQH 380
NP +YK++ R + EGCLSFPGIYA+V RP S+K++A+D+ GA+ +V LSGLPAR+FQH
Sbjct: 152 NPVVYKSAKRLLVFEEGCLSFPGIYANVVRPESVKIEAQDVTGAKIKVKLSGLPARVFQH 211
Query: 379 EFDHLQGILFFDRMTEDVLETIRSQLKLLEKKYENTTGLESPESIDKNISGQRKEIAGFA 200
EFDHL GILFFDRMT DVLET+R +LK LEKKYE TTGL PE++D N G K++ F+
Sbjct: 212 EFDHLLGILFFDRMTMDVLETVRDELKNLEKKYEETTGLTVPETVD-NYKG-AKDVFSFS 269
Query: 199 Q 197
+
Sbjct: 270 R 270
>gb|EXC20304.1| Peptide deformylase 1B [Morus notabilis]
Length = 266
Score = 303 bits (777), Expect = 6e-80
Identities = 157/262 (59%), Positives = 188/262 (71%), Gaps = 36/262 (13%)
Frame = -3
Query: 874 SPFADVSVQARRGPSSQVEDLASPADLCFESPLKIVEYPDPILRARNKRISAFDENLRKL 695
+P V QARRG S + +++ASPADL FE PLKIV YPDPILRA+NKRI +FD+NL+KL
Sbjct: 4 APLVPVVAQARRGSSLKEDEVASPADLQFEPPLKIVVYPDPILRAKNKRIDSFDDNLKKL 63
Query: 694 VDEMFDIMYKTDGVGLSAPQVGVNVQLMVFNPAGERGEGEEIVLVNPKMYKASTRTFFYN 515
V EMFD+MYKTDG+GLSAPQVG+NVQLMV NPAGERG GEEIVLVNP++ + S + +N
Sbjct: 64 VHEMFDVMYKTDGIGLSAPQVGMNVQLMVLNPAGERGVGEEIVLVNPRVSRYSKKMVLFN 123
Query: 514 EGCLSFPGIYADVERPASIKVDARDINGARFRVNLSGLPARIFQHEFDH----------- 368
EGCLSFPGIYADV+RP S+K+DARD+NGARF VNLSGLPAR+FQHEFDH
Sbjct: 124 EGCLSFPGIYADVQRPESVKIDARDVNGARFTVNLSGLPARVFQHEFDHLQVSIQHFLIQ 183
Query: 367 -------------------------LQGILFFDRMTEDVLETIRSQLKLLEKKYENTTGL 263
LQG+LFFDRMTE VL+ IR+QL+ LEKKYE+ TG
Sbjct: 184 YIIAFLMKNYPLYFISSFIFLWQPCLQGVLFFDRMTEGVLDGIRAQLQSLEKKYEDKTGF 243
Query: 262 ESPESIDKNISGQRKEIAGFAQ 197
SPE ID+ ++K GF +
Sbjct: 244 PSPERIDET-RKKKKVAVGFGK 264
>ref|XP_002458212.1| hypothetical protein SORBIDRAFT_03g029040 [Sorghum bicolor]
gi|241930187|gb|EES03332.1| hypothetical protein
SORBIDRAFT_03g029040 [Sorghum bicolor]
Length = 264
Score = 303 bits (777), Expect = 6e-80
Identities = 153/239 (64%), Positives = 186/239 (77%), Gaps = 6/239 (2%)
Frame = -3
Query: 895 PLAVVRDSPFADVSVQARRGPSSQV------EDLASPADLCFESPLKIVEYPDPILRARN 734
PL + R P + +ARRG S ED A+ DL FESPL++V+YPDPILRARN
Sbjct: 28 PLPLRRAGPAMPLVARARRGLGSSTAADPLAEDFATATDLRFESPLEVVKYPDPILRARN 87
Query: 733 KRISAFDENLRKLVDEMFDIMYKTDGVGLSAPQVGVNVQLMVFNPAGERGEGEEIVLVNP 554
KRI+AFD NLR L DEMFD+MYKTDG+GLSAPQVGVNVQLMVFNPAG +GEGEEIVLVNP
Sbjct: 88 KRINAFDANLRALADEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPAGVKGEGEEIVLVNP 147
Query: 553 KMYKASTRTFFYNEGCLSFPGIYADVERPASIKVDARDINGARFRVNLSGLPARIFQHEF 374
+YK++ R + EGCLSFPGIY +V RP S+K++A+D+ GA+ +V LSGLPAR+FQHEF
Sbjct: 148 VVYKSAKRLLVFEEGCLSFPGIYGNVLRPESVKIEAQDVTGAKIKVKLSGLPARVFQHEF 207
Query: 373 DHLQGILFFDRMTEDVLETIRSQLKLLEKKYENTTGLESPESIDKNISGQRKEIAGFAQ 197
DHL GILFFDRMT DVLET+R +LK LEKKYE TGL SPE+++ N G K++ F++
Sbjct: 208 DHLLGILFFDRMTMDVLETVREELKNLEKKYEERTGLASPETVE-NYEG-AKDVFSFSR 264
>ref|XP_006338575.1| PREDICTED: peptide deformylase 1B, chloroplastic-like [Solanum
tuberosum]
Length = 279
Score = 302 bits (774), Expect = 1e-79
Identities = 155/227 (68%), Positives = 181/227 (79%), Gaps = 2/227 (0%)
Frame = -3
Query: 871 PFADVSVQARRGPSSQV--EDLASPADLCFESPLKIVEYPDPILRARNKRISAFDENLRK 698
P V QARR SS+ +++A+PADL FE PLKIVEYPDPILRA+NKRI FD NL+K
Sbjct: 54 PKLAVYAQARRVLSSKTKGDEIATPADLSFEVPLKIVEYPDPILRAKNKRIGKFDANLKK 113
Query: 697 LVDEMFDIMYKTDGVGLSAPQVGVNVQLMVFNPAGERGEGEEIVLVNPKMYKASTRTFFY 518
LVDEMFDIMYKTDG+GLSAPQVG+NVQLMVFN AGERGEGEEIVLVNP++ + S R Y
Sbjct: 114 LVDEMFDIMYKTDGIGLSAPQVGMNVQLMVFNAAGERGEGEEIVLVNPRVSRYSRRIIPY 173
Query: 517 NEGCLSFPGIYADVERPASIKVDARDINGARFRVNLSGLPARIFQHEFDHLQGILFFDRM 338
EGCLSFP I+ DVERP S+KV A+DINGARF ++LS LPAR+FQHEFDHLQG+LFFD+M
Sbjct: 174 EEGCLSFPMIHGDVERPDSVKVGAQDINGARFEISLSALPARVFQHEFDHLQGVLFFDKM 233
Query: 337 TEDVLETIRSQLKLLEKKYENTTGLESPESIDKNISGQRKEIAGFAQ 197
T++VL+TIR L LEKKYE TGL +PESI N +K GF +
Sbjct: 234 TDEVLDTIRETLVALEKKYEERTGLPTPESI--NTRKTKKAAVGFGK 278
>gb|ESW24670.1| hypothetical protein PHAVU_004G149800g [Phaseolus vulgaris]
gi|561025986|gb|ESW24671.1| hypothetical protein
PHAVU_004G149800g [Phaseolus vulgaris]
Length = 260
Score = 302 bits (773), Expect = 2e-79
Identities = 147/208 (70%), Positives = 172/208 (82%)
Frame = -3
Query: 820 EDLASPADLCFESPLKIVEYPDPILRARNKRISAFDENLRKLVDEMFDIMYKTDGVGLSA 641
+++ASP D F PL+IVEYPDP LRARNKR+ FD+NL+KLV EMFD+MYKTDG+GLSA
Sbjct: 55 DEVASPGDFEFVPPLRIVEYPDPKLRARNKRVVTFDDNLKKLVHEMFDVMYKTDGIGLSA 114
Query: 640 PQVGVNVQLMVFNPAGERGEGEEIVLVNPKMYKASTRTFFYNEGCLSFPGIYADVERPAS 461
PQVG+NVQLMVFNP GERGEGEEIVLVNP++ K S + +NEGCLSFPGI ADV+RP S
Sbjct: 115 PQVGINVQLMVFNPVGERGEGEEIVLVNPRVSKYSKKLTLFNEGCLSFPGILADVKRPES 174
Query: 460 IKVDARDINGARFRVNLSGLPARIFQHEFDHLQGILFFDRMTEDVLETIRSQLKLLEKKY 281
+K+DARD+NG RF VNLS LPARIFQHEFDHLQGILFFDRM+EDVL++IR QL+ LE KY
Sbjct: 175 VKIDARDVNGTRFSVNLSDLPARIFQHEFDHLQGILFFDRMSEDVLDSIRGQLQALENKY 234
Query: 280 ENTTGLESPESIDKNISGQRKEIAGFAQ 197
E TGL SPE I+ S +RK GF +
Sbjct: 235 EGLTGLPSPEKIEN--SKKRKAAVGFGR 260
>ref|NP_001234441.1| peptide deformylase 1B, chloroplastic [Solanum lycopersicum]
gi|17433052|sp|Q9FV54.1|DEF1B_SOLLC RecName:
Full=Peptide deformylase 1B, chloroplastic; Short=PDF
1B; AltName: Full=Polypeptide deformylase; Flags:
Precursor gi|11320950|gb|AAG33972.1| peptide
deformylase-like protein [Solanum lycopersicum]
Length = 279
Score = 300 bits (769), Expect = 5e-79
Identities = 166/272 (61%), Positives = 198/272 (72%), Gaps = 14/272 (5%)
Frame = -3
Query: 970 AASSCFPR---------SFPFPYSGAALRGFSSQPLAVVRDS---PFADVSVQARRGPSS 827
A+SS F R S P P S + R S+ L S P V QARR SS
Sbjct: 9 ASSSSFTRFLRPLLSRNSSPSPISYSLHRYKSANCLFFSASSNKPPKLAVYAQARRVLSS 68
Query: 826 QV--EDLASPADLCFESPLKIVEYPDPILRARNKRISAFDENLRKLVDEMFDIMYKTDGV 653
+ +++A+PADL F PLKIVEYPDPILRA+NKRI FD NL+KLVDEMFDIMYKTDG+
Sbjct: 69 KTKGDEIATPADLSFVVPLKIVEYPDPILRAKNKRIDNFDANLKKLVDEMFDIMYKTDGI 128
Query: 652 GLSAPQVGVNVQLMVFNPAGERGEGEEIVLVNPKMYKASTRTFFYNEGCLSFPGIYADVE 473
GLSAPQVG+NVQLMVFN AGERGEGEEIVLVNP++ + S R Y EGCLSFP I+ DV+
Sbjct: 129 GLSAPQVGMNVQLMVFNAAGERGEGEEIVLVNPRVSRYSRRIIPYEEGCLSFPMIHGDVK 188
Query: 472 RPASIKVDARDINGARFRVNLSGLPARIFQHEFDHLQGILFFDRMTEDVLETIRSQLKLL 293
RP S+KVDA+DING RF ++LS LPAR+FQHEFDHLQG+LFFD+MT++VL+TIR +L L
Sbjct: 189 RPESVKVDAQDINGTRFEISLSALPARVFQHEFDHLQGVLFFDKMTDEVLDTIREKLVAL 248
Query: 292 EKKYENTTGLESPESIDKNISGQRKEIAGFAQ 197
EKKYE+ TGL +PESI N +K GF +
Sbjct: 249 EKKYEDRTGLPTPESI--NTRKIKKAAVGFGK 278
>dbj|BAJ91971.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 270
Score = 299 bits (766), Expect = 1e-78
Identities = 158/270 (58%), Positives = 189/270 (70%)
Frame = -3
Query: 979 SRRAASSCFPRSFPFPYSGAALRGFSSQPLAVVRDSPFADVSVQARRGPSSQVEDLASPA 800
S R + PR+ P P +G A PLA F + A P ++ +D AS A
Sbjct: 21 SSRPLLATHPRTLPLPRTGPAT------PLAARTRRGFGSATSAA---PPNEDDDFASAA 71
Query: 799 DLCFESPLKIVEYPDPILRARNKRISAFDENLRKLVDEMFDIMYKTDGVGLSAPQVGVNV 620
DL FE PLK+V+YPDP+LRARNKRI+ FD NLR L DEMFD+MYKTDG+GLSAPQVGVNV
Sbjct: 72 DLRFEPPLKVVQYPDPVLRARNKRINTFDNNLRSLADEMFDVMYKTDGIGLSAPQVGVNV 131
Query: 619 QLMVFNPAGERGEGEEIVLVNPKMYKASTRTFFYNEGCLSFPGIYADVERPASIKVDARD 440
QLMVFNPAG +GEGEEIVLVNP +YK S R Y EGCLSFPGIYA+V RP ++K+DA+D
Sbjct: 132 QLMVFNPAGVKGEGEEIVLVNPVVYKFSKRLSVYEEGCLSFPGIYANVLRPDTVKIDAQD 191
Query: 439 INGARFRVNLSGLPARIFQHEFDHLQGILFFDRMTEDVLETIRSQLKLLEKKYENTTGLE 260
+GA+ +V LS L AR+FQHEFDHLQGILFFDRMT DV+E+I QLK LE+KYE TG
Sbjct: 192 ASGAKIKVKLSELSARVFQHEFDHLQGILFFDRMTMDVVESIHEQLKSLEEKYEEITGQA 251
Query: 259 SPESIDKNISGQRKEIAGFAQRKEITGFAR 170
SPE+ IA F K++ F+R
Sbjct: 252 SPET-----------IANFRGTKDVVSFSR 270