BLASTX nr result
ID: Zingiber25_contig00028639
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00028639
(429 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002468278.1| hypothetical protein SORBIDRAFT_01g042890 [S... 150 2e-34
ref|NP_001141474.1| Replication protein A DNA-binding subunit [Z... 150 2e-34
gb|AAB71836.1| replication protein A1 [Oryza sativa Indica Group... 147 1e-33
dbj|BAC77529.1| replication protein A 70b [Oryza sativa Japonica... 147 1e-33
ref|NP_001049369.1| Os03g0214100 [Oryza sativa Japonica Group] g... 147 1e-33
ref|XP_006345121.1| PREDICTED: replication protein A 70 kDa DNA-... 146 2e-33
ref|XP_004236053.1| PREDICTED: replication protein A 70 kDa DNA-... 146 3e-33
ref|XP_004985197.1| PREDICTED: replication protein A 70 kDa DNA-... 145 5e-33
gb|ACG44315.1| replication protein A 70 kDa DNA-binding subunit ... 145 5e-33
ref|NP_001147118.1| replication protein A1 [Zea mays] gi|1956074... 145 7e-33
ref|XP_006649629.1| PREDICTED: replication protein A 70 kDa DNA-... 144 1e-32
gb|EMT13867.1| Replication protein A 70 kDa DNA-binding subunit ... 142 5e-32
dbj|BAF64713.1| 70 kDa subunit of replication protein A [Ipomoea... 142 5e-32
gb|EMS53693.1| Replication protein A 70 kDa DNA-binding subunit ... 142 6e-32
gb|ACN25531.1| unknown [Zea mays] gi|414865518|tpg|DAA44075.1| T... 141 1e-31
ref|XP_003561889.1| PREDICTED: replication protein A 70 kDa DNA-... 135 6e-30
ref|XP_004169647.1| PREDICTED: replication protein A 70 kDa DNA-... 133 2e-29
ref|XP_004138198.1| PREDICTED: replication protein A 70 kDa DNA-... 133 2e-29
ref|XP_006477677.1| PREDICTED: replication protein A 70 kDa DNA-... 133 3e-29
ref|XP_006440765.1| hypothetical protein CICLE_v10019317mg [Citr... 133 3e-29
>ref|XP_002468278.1| hypothetical protein SORBIDRAFT_01g042890 [Sorghum bicolor]
gi|241922132|gb|EER95276.1| hypothetical protein
SORBIDRAFT_01g042890 [Sorghum bicolor]
Length = 623
Score = 150 bits (379), Expect = 2e-34
Identities = 71/94 (75%), Positives = 83/94 (88%)
Frame = -3
Query: 427 SGEAWLSVFNEQAEKILGCSADELNRIKTEEGDEKYQLKLKEATWVPHLFRVSVVHTEYM 248
+GEAW+SVFNE AEKI+GCSADEL+RI+ EEGD+ Y LKLKEATWVPHLFRVSV EYM
Sbjct: 530 TGEAWVSVFNEHAEKIIGCSADELDRIRKEEGDDSYILKLKEATWVPHLFRVSVTQHEYM 589
Query: 247 HEKRQRITVRAQAPMDCLAESKYLLEEIEKMSVC 146
+EKRQRITVR++AP+D AESKYLLEEI K++ C
Sbjct: 590 NEKRQRITVRSEAPVDYAAESKYLLEEIAKLTAC 623
>ref|NP_001141474.1| Replication protein A DNA-binding subunit [Zea mays]
gi|194704722|gb|ACF86445.1| unknown [Zea mays]
gi|195647462|gb|ACG43199.1| replication protein A 70 kDa
DNA-binding subunit [Zea mays]
gi|413956552|gb|AFW89201.1| Replication protein A
DNA-binding subunit [Zea mays]
Length = 623
Score = 150 bits (379), Expect = 2e-34
Identities = 71/94 (75%), Positives = 82/94 (87%)
Frame = -3
Query: 427 SGEAWLSVFNEQAEKILGCSADELNRIKTEEGDEKYQLKLKEATWVPHLFRVSVVHTEYM 248
+GEAW+SVFNE AEKI+GCSADEL+RI+ EEGD+ Y LKLKEATWVPHLFRVSV EYM
Sbjct: 530 TGEAWVSVFNEHAEKIIGCSADELDRIRKEEGDDSYVLKLKEATWVPHLFRVSVTQHEYM 589
Query: 247 HEKRQRITVRAQAPMDCLAESKYLLEEIEKMSVC 146
+EKRQRITVR +AP+D AESKYLLEEI K++ C
Sbjct: 590 NEKRQRITVRGEAPVDFAAESKYLLEEIAKLTAC 623
>gb|AAB71836.1| replication protein A1 [Oryza sativa Indica Group]
gi|125542895|gb|EAY89034.1| hypothetical protein
OsI_10518 [Oryza sativa Indica Group]
Length = 630
Score = 147 bits (371), Expect = 1e-33
Identities = 68/94 (72%), Positives = 84/94 (89%)
Frame = -3
Query: 427 SGEAWLSVFNEQAEKILGCSADELNRIKTEEGDEKYQLKLKEATWVPHLFRVSVVHTEYM 248
+GEAWLS+FN+QAE+I+GCSADEL+RI+ EEGD+ Y LKLKEATWVPHLFRVSV EYM
Sbjct: 537 TGEAWLSLFNDQAERIVGCSADELDRIRKEEGDDSYLLKLKEATWVPHLFRVSVTQNEYM 596
Query: 247 HEKRQRITVRAQAPMDCLAESKYLLEEIEKMSVC 146
+EKRQRITVR++AP+D AE+KY+LEEI K++ C
Sbjct: 597 NEKRQRITVRSEAPVDHAAEAKYMLEEIAKLTGC 630
>dbj|BAC77529.1| replication protein A 70b [Oryza sativa Japonica Group]
Length = 630
Score = 147 bits (371), Expect = 1e-33
Identities = 68/94 (72%), Positives = 84/94 (89%)
Frame = -3
Query: 427 SGEAWLSVFNEQAEKILGCSADELNRIKTEEGDEKYQLKLKEATWVPHLFRVSVVHTEYM 248
+GEAWLS+FN+QAE+I+GCSADEL+RI+ EEGD+ Y LKLKEATWVPHLFRVSV EYM
Sbjct: 537 TGEAWLSLFNDQAERIVGCSADELDRIRKEEGDDSYLLKLKEATWVPHLFRVSVTQNEYM 596
Query: 247 HEKRQRITVRAQAPMDCLAESKYLLEEIEKMSVC 146
+EKRQRITVR++AP+D AE+KY+LEEI K++ C
Sbjct: 597 NEKRQRITVRSEAPVDHAAEAKYMLEEIAKLTGC 630
>ref|NP_001049369.1| Os03g0214100 [Oryza sativa Japonica Group]
gi|122247374|sp|Q10Q08.1|RFA1B_ORYSJ RecName:
Full=Replication protein A 70 kDa DNA-binding subunit B;
Short=OsRPA70b; AltName: Full=Replication factor A
protein 1B; AltName: Full=Replication protein A 1B
gi|108706832|gb|ABF94627.1| replication factor-a protein
1 containing protein, expressed [Oryza sativa Japonica
Group] gi|113547840|dbj|BAF11283.1| Os03g0214100 [Oryza
sativa Japonica Group] gi|125585388|gb|EAZ26052.1|
hypothetical protein OsJ_09906 [Oryza sativa Japonica
Group]
Length = 630
Score = 147 bits (371), Expect = 1e-33
Identities = 68/94 (72%), Positives = 84/94 (89%)
Frame = -3
Query: 427 SGEAWLSVFNEQAEKILGCSADELNRIKTEEGDEKYQLKLKEATWVPHLFRVSVVHTEYM 248
+GEAWLS+FN+QAE+I+GCSADEL+RI+ EEGD+ Y LKLKEATWVPHLFRVSV EYM
Sbjct: 537 TGEAWLSLFNDQAERIVGCSADELDRIRKEEGDDSYLLKLKEATWVPHLFRVSVTQNEYM 596
Query: 247 HEKRQRITVRAQAPMDCLAESKYLLEEIEKMSVC 146
+EKRQRITVR++AP+D AE+KY+LEEI K++ C
Sbjct: 597 NEKRQRITVRSEAPVDHAAEAKYMLEEIAKLTGC 630
>ref|XP_006345121.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit B-like
[Solanum tuberosum]
Length = 614
Score = 146 bits (369), Expect = 2e-33
Identities = 71/93 (76%), Positives = 82/93 (88%)
Frame = -3
Query: 427 SGEAWLSVFNEQAEKILGCSADELNRIKTEEGDEKYQLKLKEATWVPHLFRVSVVHTEYM 248
SGEAWLS FNEQAEKILGCSADEL+++K+EEG+ YQ+KLKEATWVPHLFRVSV EY
Sbjct: 520 SGEAWLSTFNEQAEKILGCSADELDKLKSEEGEIAYQMKLKEATWVPHLFRVSVAPQEYN 579
Query: 247 HEKRQRITVRAQAPMDCLAESKYLLEEIEKMSV 149
+EKRQRITVRA AP+D AESKYLLEE+ KM++
Sbjct: 580 NEKRQRITVRAIAPVDYAAESKYLLEEMSKMNI 612
>ref|XP_004236053.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Solanum lycopersicum]
Length = 614
Score = 146 bits (368), Expect = 3e-33
Identities = 70/93 (75%), Positives = 82/93 (88%)
Frame = -3
Query: 427 SGEAWLSVFNEQAEKILGCSADELNRIKTEEGDEKYQLKLKEATWVPHLFRVSVVHTEYM 248
SGEAWLS FN+QAEKILGCSADEL+++K+EEG+ YQ+KLKEATWVPHLFRVSV EY
Sbjct: 520 SGEAWLSTFNDQAEKILGCSADELDKLKSEEGETAYQMKLKEATWVPHLFRVSVAQQEYN 579
Query: 247 HEKRQRITVRAQAPMDCLAESKYLLEEIEKMSV 149
+EKRQRITVRA AP+D AESKYLLEE+ KM++
Sbjct: 580 NEKRQRITVRAIAPVDYEAESKYLLEEMSKMNI 612
>ref|XP_004985197.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Setaria italica]
Length = 623
Score = 145 bits (366), Expect = 5e-33
Identities = 68/94 (72%), Positives = 81/94 (86%)
Frame = -3
Query: 427 SGEAWLSVFNEQAEKILGCSADELNRIKTEEGDEKYQLKLKEATWVPHLFRVSVVHTEYM 248
+GEAW+SVFNE AE+I+GCSADEL+RI+ EEGD+ Y KLKEATWVPHLFRVSV EYM
Sbjct: 530 TGEAWVSVFNEHAERIIGCSADELDRIRKEEGDDSYIQKLKEATWVPHLFRVSVAQHEYM 589
Query: 247 HEKRQRITVRAQAPMDCLAESKYLLEEIEKMSVC 146
+E+RQRITVR +AP+D AESKYLLEEI K++ C
Sbjct: 590 NERRQRITVRTEAPVDYAAESKYLLEEIAKLTAC 623
>gb|ACG44315.1| replication protein A 70 kDa DNA-binding subunit [Zea mays]
Length = 618
Score = 145 bits (366), Expect = 5e-33
Identities = 68/94 (72%), Positives = 82/94 (87%)
Frame = -3
Query: 427 SGEAWLSVFNEQAEKILGCSADELNRIKTEEGDEKYQLKLKEATWVPHLFRVSVVHTEYM 248
+GEAW+SVFNE AEKI+GCSADEL+RI+ EEGD+ Y LKLKEATWVPHLFRVSV EY
Sbjct: 525 TGEAWVSVFNEHAEKIIGCSADELDRIRKEEGDDSYALKLKEATWVPHLFRVSVTQHEYN 584
Query: 247 HEKRQRITVRAQAPMDCLAESKYLLEEIEKMSVC 146
+EKRQRITVR++AP++ AESKYLLE+I K++ C
Sbjct: 585 NEKRQRITVRSEAPVEHAAESKYLLEQIAKLTAC 618
>ref|NP_001147118.1| replication protein A1 [Zea mays] gi|195607412|gb|ACG25536.1|
replication protein A 70 kDa DNA-binding subunit [Zea
mays]
Length = 618
Score = 145 bits (365), Expect = 7e-33
Identities = 68/94 (72%), Positives = 82/94 (87%)
Frame = -3
Query: 427 SGEAWLSVFNEQAEKILGCSADELNRIKTEEGDEKYQLKLKEATWVPHLFRVSVVHTEYM 248
+GEAW+SVFNE AEKI+GCSADEL+RI+ EEGD+ Y LKLKEATWVPHLFRVSV EY
Sbjct: 525 TGEAWVSVFNEHAEKIIGCSADELDRIRKEEGDDSYVLKLKEATWVPHLFRVSVTQHEYN 584
Query: 247 HEKRQRITVRAQAPMDCLAESKYLLEEIEKMSVC 146
+EKRQRITVR++AP++ AESKYLLE+I K++ C
Sbjct: 585 NEKRQRITVRSEAPVEHAAESKYLLEQIAKLTAC 618
>ref|XP_006649629.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit B-like
[Oryza brachyantha]
Length = 632
Score = 144 bits (363), Expect = 1e-32
Identities = 67/92 (72%), Positives = 82/92 (89%)
Frame = -3
Query: 427 SGEAWLSVFNEQAEKILGCSADELNRIKTEEGDEKYQLKLKEATWVPHLFRVSVVHTEYM 248
+GEAW S+FN+QAE+I+GCSADEL+RI+ EEGD+ Y LKLKEATWVPHLFRVSV EYM
Sbjct: 539 TGEAWFSLFNDQAERIVGCSADELDRIRKEEGDDSYLLKLKEATWVPHLFRVSVTQNEYM 598
Query: 247 HEKRQRITVRAQAPMDCLAESKYLLEEIEKMS 152
+EKRQRITVR++AP+D AE+KYLLEEI K++
Sbjct: 599 NEKRQRITVRSEAPVDHAAEAKYLLEEIAKLT 630
>gb|EMT13867.1| Replication protein A 70 kDa DNA-binding subunit [Aegilops
tauschii]
Length = 600
Score = 142 bits (358), Expect = 5e-32
Identities = 65/92 (70%), Positives = 83/92 (90%)
Frame = -3
Query: 427 SGEAWLSVFNEQAEKILGCSADELNRIKTEEGDEKYQLKLKEATWVPHLFRVSVVHTEYM 248
+GEAWLS+FN+QAE+I+GCSADEL+RI+ EEGD+ +QLKLKEATW+PHLFRVSVV EYM
Sbjct: 507 TGEAWLSLFNDQAERIVGCSADELDRIRKEEGDDMFQLKLKEATWIPHLFRVSVVQNEYM 566
Query: 247 HEKRQRITVRAQAPMDCLAESKYLLEEIEKMS 152
EKRQRITVR+++P+D AE++Y LEEI K++
Sbjct: 567 GEKRQRITVRSESPVDYAAEARYQLEEIAKLT 598
>dbj|BAF64713.1| 70 kDa subunit of replication protein A [Ipomoea nil]
Length = 604
Score = 142 bits (358), Expect = 5e-32
Identities = 68/95 (71%), Positives = 83/95 (87%), Gaps = 1/95 (1%)
Frame = -3
Query: 427 SGEAWLSVFNEQAEKILGCSADELNRIKTEEGDEK-YQLKLKEATWVPHLFRVSVVHTEY 251
SGEAWLSVFNEQAEKI+GCSADEL+R+++++GD YQ+KLKEATWVP+LFRVSV EY
Sbjct: 509 SGEAWLSVFNEQAEKIIGCSADELDRLRSQDGDSSAYQMKLKEATWVPYLFRVSVTPQEY 568
Query: 250 MHEKRQRITVRAQAPMDCLAESKYLLEEIEKMSVC 146
+EKRQRITVRA AP+D AES+Y LEE+ KM++C
Sbjct: 569 NNEKRQRITVRAAAPVDFAAESRYFLEEMAKMNIC 603
>gb|EMS53693.1| Replication protein A 70 kDa DNA-binding subunit [Triticum urartu]
Length = 592
Score = 142 bits (357), Expect = 6e-32
Identities = 65/92 (70%), Positives = 83/92 (90%)
Frame = -3
Query: 427 SGEAWLSVFNEQAEKILGCSADELNRIKTEEGDEKYQLKLKEATWVPHLFRVSVVHTEYM 248
+GEAWLS+FN+QAE+I+GCSADEL+RI+ EEGD+ +QLKLKEATW+PHLFRVSVV EYM
Sbjct: 499 TGEAWLSLFNDQAERIVGCSADELDRIRKEEGDDMFQLKLKEATWIPHLFRVSVVQNEYM 558
Query: 247 HEKRQRITVRAQAPMDCLAESKYLLEEIEKMS 152
EKRQRITVR+++P+D AE++Y LEEI K++
Sbjct: 559 GEKRQRITVRSESPVDYSAEARYQLEEIAKLT 590
>gb|ACN25531.1| unknown [Zea mays] gi|414865518|tpg|DAA44075.1| TPA: replication
protein A DNA-binding subunit [Zea mays]
Length = 617
Score = 141 bits (355), Expect = 1e-31
Identities = 67/92 (72%), Positives = 80/92 (86%)
Frame = -3
Query: 427 SGEAWLSVFNEQAEKILGCSADELNRIKTEEGDEKYQLKLKEATWVPHLFRVSVVHTEYM 248
+GEAW SVFNE AEKI+GCSADEL+RI+ EEGD+ Y LKLKEATWVPHLFRVSV EY
Sbjct: 525 TGEAWFSVFNEHAEKIIGCSADELDRIRKEEGDDSYVLKLKEATWVPHLFRVSVTQHEYN 584
Query: 247 HEKRQRITVRAQAPMDCLAESKYLLEEIEKMS 152
+EKRQRITVR++AP++ AESKYLLE+I K++
Sbjct: 585 NEKRQRITVRSEAPVEHAAESKYLLEQIAKLT 616
>ref|XP_003561889.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Brachypodium distachyon]
Length = 635
Score = 135 bits (340), Expect = 6e-30
Identities = 62/92 (67%), Positives = 81/92 (88%)
Frame = -3
Query: 427 SGEAWLSVFNEQAEKILGCSADELNRIKTEEGDEKYQLKLKEATWVPHLFRVSVVHTEYM 248
+GEAWLS+FN+QAE+I+GCSADEL+R + EEGD+ + L+LKEATWVPHLFRVSV EYM
Sbjct: 542 TGEAWLSLFNDQAERIVGCSADELDRSRKEEGDDSFLLRLKEATWVPHLFRVSVSQNEYM 601
Query: 247 HEKRQRITVRAQAPMDCLAESKYLLEEIEKMS 152
EKRQRITVR+++P+D AE+++LLEEI K++
Sbjct: 602 GEKRQRITVRSESPVDYAAEARFLLEEIAKLT 633
>ref|XP_004169647.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like,
partial [Cucumis sativus]
Length = 560
Score = 133 bits (335), Expect = 2e-29
Identities = 65/92 (70%), Positives = 80/92 (86%), Gaps = 1/92 (1%)
Frame = -3
Query: 427 SGEAWLSVFNEQAEKILGCSADELNRIKTEEGDEK-YQLKLKEATWVPHLFRVSVVHTEY 251
SGEAW+S FNE+AE+I+GCSADEL+++K++ G+E YQLKLKEATWVPHLFRVSV EY
Sbjct: 466 SGEAWVSTFNEEAERIMGCSADELDQLKSQIGEENSYQLKLKEATWVPHLFRVSVSQNEY 525
Query: 250 MHEKRQRITVRAQAPMDCLAESKYLLEEIEKM 155
+EKRQRITVR+ AP+D AES++LLEEI KM
Sbjct: 526 NNEKRQRITVRSVAPVDFAAESRFLLEEIAKM 557
>ref|XP_004138198.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Cucumis sativus]
Length = 603
Score = 133 bits (335), Expect = 2e-29
Identities = 65/92 (70%), Positives = 80/92 (86%), Gaps = 1/92 (1%)
Frame = -3
Query: 427 SGEAWLSVFNEQAEKILGCSADELNRIKTEEGDEK-YQLKLKEATWVPHLFRVSVVHTEY 251
SGEAW+S FNE+AE+I+GCSADEL+++K++ G+E YQLKLKEATWVPHLFRVSV EY
Sbjct: 509 SGEAWVSTFNEEAERIMGCSADELDQLKSQIGEENSYQLKLKEATWVPHLFRVSVSQNEY 568
Query: 250 MHEKRQRITVRAQAPMDCLAESKYLLEEIEKM 155
+EKRQRITVR+ AP+D AES++LLEEI KM
Sbjct: 569 NNEKRQRITVRSVAPVDFAAESRFLLEEIAKM 600
>ref|XP_006477677.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit B-like
[Citrus sinensis]
Length = 623
Score = 133 bits (334), Expect = 3e-29
Identities = 63/91 (69%), Positives = 77/91 (84%), Gaps = 1/91 (1%)
Frame = -3
Query: 427 SGEAWLSVFNEQAEKILGCSADELNRIKTEEGDEK-YQLKLKEATWVPHLFRVSVVHTEY 251
SGEAW+S+FNE+AE+I+GCSADELN +K++ GD+ YQ+KLKE TWVPHL RVSV EY
Sbjct: 526 SGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEY 585
Query: 250 MHEKRQRITVRAQAPMDCLAESKYLLEEIEK 158
+EKRQR+TVRA AP+D AESK+LLEEI K
Sbjct: 586 NNEKRQRVTVRAVAPVDFAAESKFLLEEISK 616
>ref|XP_006440765.1| hypothetical protein CICLE_v10019317mg [Citrus clementina]
gi|557543027|gb|ESR54005.1| hypothetical protein
CICLE_v10019317mg [Citrus clementina]
Length = 623
Score = 133 bits (334), Expect = 3e-29
Identities = 63/91 (69%), Positives = 77/91 (84%), Gaps = 1/91 (1%)
Frame = -3
Query: 427 SGEAWLSVFNEQAEKILGCSADELNRIKTEEGDEK-YQLKLKEATWVPHLFRVSVVHTEY 251
SGEAW+S+FNE+AE+I+GCSADELN +K++ GD+ YQ+KLKE TWVPHL RVSV EY
Sbjct: 526 SGEAWISIFNEEAERIIGCSADELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEY 585
Query: 250 MHEKRQRITVRAQAPMDCLAESKYLLEEIEK 158
+EKRQR+TVRA AP+D AESK+LLEEI K
Sbjct: 586 NNEKRQRVTVRAVAPVDFAAESKFLLEEISK 616