BLASTX nr result

ID: Zingiber25_contig00028620 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00028620
         (283 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278072.2| PREDICTED: uncharacterized protein LOC100258...    79   5e-13
emb|CBI36973.3| unnamed protein product [Vitis vinifera]               79   5e-13
ref|XP_002515249.1| nucleic acid binding protein, putative [Rici...    77   3e-12
ref|XP_004245770.1| PREDICTED: uncharacterized protein LOC101256...    75   7e-12
ref|XP_004245769.1| PREDICTED: uncharacterized protein LOC101256...    75   7e-12
gb|EOX95320.1| Zinc knuckle family protein isoform 3 [Theobroma ...    75   1e-11
gb|EOX95318.1| Zinc knuckle family protein isoform 1 [Theobroma ...    75   1e-11
gb|EMJ22679.1| hypothetical protein PRUPE_ppa005385mg [Prunus pe...    73   3e-11
ref|XP_006355449.1| PREDICTED: uncharacterized protein LOC102595...    73   4e-11
ref|XP_006355448.1| PREDICTED: uncharacterized protein LOC102595...    73   4e-11
ref|XP_006355445.1| PREDICTED: uncharacterized protein LOC102595...    73   4e-11
ref|XP_002301525.2| hypothetical protein POPTR_0002s19370g [Popu...    67   3e-09
ref|XP_002320966.1| zinc knuckle family protein [Populus trichoc...    67   3e-09
ref|XP_006492364.1| PREDICTED: uncharacterized protein LOC102613...    65   9e-09
ref|XP_006492363.1| PREDICTED: uncharacterized protein LOC102613...    65   9e-09
ref|XP_006492362.1| PREDICTED: uncharacterized protein LOC102613...    65   9e-09
ref|XP_006444541.1| hypothetical protein CICLE_v10023332mg [Citr...    65   9e-09
ref|XP_002886992.1| predicted protein [Arabidopsis lyrata subsp....    63   4e-08
ref|XP_002878450.1| zinc knuckle (CCHC-type) family protein [Ara...    63   5e-08
dbj|BAC42048.1| unknown protein [Arabidopsis thaliana]                 62   8e-08

>ref|XP_002278072.2| PREDICTED: uncharacterized protein LOC100258835 [Vitis vinifera]
          Length = 466

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 37/63 (58%), Positives = 44/63 (69%)
 Frame = +3

Query: 3   QPSLVEYDQSSRNLQYAGSSLPMDSGSRHQYPADNYSASRPPEGYGEFQRQRREDFGNAY 182
           Q S  +YD SS N  YAG+++PMDS  R+  P +NY  SRP + Y EFQRQRREDFG AY
Sbjct: 404 QASYSDYDGSSANPHYAGANIPMDSRGRYPNPVENYPPSRPHDTYSEFQRQRREDFGKAY 463

Query: 183 GRY 191
            RY
Sbjct: 464 HRY 466


>emb|CBI36973.3| unnamed protein product [Vitis vinifera]
          Length = 502

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 37/63 (58%), Positives = 44/63 (69%)
 Frame = +3

Query: 3   QPSLVEYDQSSRNLQYAGSSLPMDSGSRHQYPADNYSASRPPEGYGEFQRQRREDFGNAY 182
           Q S  +YD SS N  YAG+++PMDS  R+  P +NY  SRP + Y EFQRQRREDFG AY
Sbjct: 440 QASYSDYDGSSANPHYAGANIPMDSRGRYPNPVENYPPSRPHDTYSEFQRQRREDFGKAY 499

Query: 183 GRY 191
            RY
Sbjct: 500 HRY 502


>ref|XP_002515249.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223545729|gb|EEF47233.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 467

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 36/63 (57%), Positives = 45/63 (71%)
 Frame = +3

Query: 3   QPSLVEYDQSSRNLQYAGSSLPMDSGSRHQYPADNYSASRPPEGYGEFQRQRREDFGNAY 182
           QP+  +YD SS N  Y+G+ LPM+S +R+    +NY  SRP + YGEFQRQRREDFG AY
Sbjct: 406 QPTYSDYDSSSANPHYSGAGLPMESRTRYSNHVENYP-SRPHDNYGEFQRQRREDFGKAY 464

Query: 183 GRY 191
            RY
Sbjct: 465 NRY 467


>ref|XP_004245770.1| PREDICTED: uncharacterized protein LOC101256403 isoform 2 [Solanum
           lycopersicum]
          Length = 466

 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 34/63 (53%), Positives = 42/63 (66%)
 Frame = +3

Query: 3   QPSLVEYDQSSRNLQYAGSSLPMDSGSRHQYPADNYSASRPPEGYGEFQRQRREDFGNAY 182
           Q S  EYD S+ N  Y+G ++PM+   R+  P DNY  SRP + Y +FQRQRREDFG AY
Sbjct: 404 QQSYQEYDNSAGNPHYSGPNMPMEPRGRYPNPMDNYHPSRPHDSYDDFQRQRREDFGKAY 463

Query: 183 GRY 191
            RY
Sbjct: 464 NRY 466


>ref|XP_004245769.1| PREDICTED: uncharacterized protein LOC101256403 isoform 1 [Solanum
           lycopersicum]
          Length = 468

 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 34/63 (53%), Positives = 42/63 (66%)
 Frame = +3

Query: 3   QPSLVEYDQSSRNLQYAGSSLPMDSGSRHQYPADNYSASRPPEGYGEFQRQRREDFGNAY 182
           Q S  EYD S+ N  Y+G ++PM+   R+  P DNY  SRP + Y +FQRQRREDFG AY
Sbjct: 406 QQSYQEYDNSAGNPHYSGPNMPMEPRGRYPNPMDNYHPSRPHDSYDDFQRQRREDFGKAY 465

Query: 183 GRY 191
            RY
Sbjct: 466 NRY 468


>gb|EOX95320.1| Zinc knuckle family protein isoform 3 [Theobroma cacao]
          Length = 465

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 37/63 (58%), Positives = 44/63 (69%)
 Frame = +3

Query: 3   QPSLVEYDQSSRNLQYAGSSLPMDSGSRHQYPADNYSASRPPEGYGEFQRQRREDFGNAY 182
           Q +  EYD S+ N  YAG++L +DS  R+  P DNY  SRP + YGEFQRQRREDFG AY
Sbjct: 404 QQAYSEYDGSTVNAPYAGANLSIDSRGRYPNPMDNYP-SRPHDSYGEFQRQRREDFGKAY 462

Query: 183 GRY 191
            RY
Sbjct: 463 NRY 465


>gb|EOX95318.1| Zinc knuckle family protein isoform 1 [Theobroma cacao]
           gi|508703425|gb|EOX95321.1| Zinc knuckle family protein
           isoform 1 [Theobroma cacao]
          Length = 463

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 37/63 (58%), Positives = 44/63 (69%)
 Frame = +3

Query: 3   QPSLVEYDQSSRNLQYAGSSLPMDSGSRHQYPADNYSASRPPEGYGEFQRQRREDFGNAY 182
           Q +  EYD S+ N  YAG++L +DS  R+  P DNY  SRP + YGEFQRQRREDFG AY
Sbjct: 402 QQAYSEYDGSTVNAPYAGANLSIDSRGRYPNPMDNYP-SRPHDSYGEFQRQRREDFGKAY 460

Query: 183 GRY 191
            RY
Sbjct: 461 NRY 463


>gb|EMJ22679.1| hypothetical protein PRUPE_ppa005385mg [Prunus persica]
          Length = 464

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 35/58 (60%), Positives = 42/58 (72%)
 Frame = +3

Query: 18  EYDQSSRNLQYAGSSLPMDSGSRHQYPADNYSASRPPEGYGEFQRQRREDFGNAYGRY 191
           EYD SS N  YAG+SL MDS SR+  P +NY  SRP + +GEFQRQR +D+G  YGRY
Sbjct: 408 EYDGSSANPHYAGASLAMDSRSRYPNPMENYP-SRPHDNFGEFQRQRHDDYGRGYGRY 464


>ref|XP_006355449.1| PREDICTED: uncharacterized protein LOC102595024 isoform X5 [Solanum
           tuberosum] gi|565377997|ref|XP_006355450.1| PREDICTED:
           uncharacterized protein LOC102595024 isoform X6 [Solanum
           tuberosum]
          Length = 468

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 32/63 (50%), Positives = 42/63 (66%)
 Frame = +3

Query: 3   QPSLVEYDQSSRNLQYAGSSLPMDSGSRHQYPADNYSASRPPEGYGEFQRQRREDFGNAY 182
           Q S  EY+ S+ N  Y+G ++PM+   R+  P DNY  SRP + Y +FQRQRR+DFG AY
Sbjct: 406 QQSYQEYENSAGNPHYSGPNIPMEPRGRYPNPMDNYHPSRPHDSYDDFQRQRRDDFGKAY 465

Query: 183 GRY 191
            RY
Sbjct: 466 NRY 468


>ref|XP_006355448.1| PREDICTED: uncharacterized protein LOC102595024 isoform X4 [Solanum
           tuberosum]
          Length = 471

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 32/63 (50%), Positives = 42/63 (66%)
 Frame = +3

Query: 3   QPSLVEYDQSSRNLQYAGSSLPMDSGSRHQYPADNYSASRPPEGYGEFQRQRREDFGNAY 182
           Q S  EY+ S+ N  Y+G ++PM+   R+  P DNY  SRP + Y +FQRQRR+DFG AY
Sbjct: 409 QQSYQEYENSAGNPHYSGPNIPMEPRGRYPNPMDNYHPSRPHDSYDDFQRQRRDDFGKAY 468

Query: 183 GRY 191
            RY
Sbjct: 469 NRY 471


>ref|XP_006355445.1| PREDICTED: uncharacterized protein LOC102595024 isoform X1 [Solanum
           tuberosum] gi|565377989|ref|XP_006355446.1| PREDICTED:
           uncharacterized protein LOC102595024 isoform X2 [Solanum
           tuberosum] gi|565377991|ref|XP_006355447.1| PREDICTED:
           uncharacterized protein LOC102595024 isoform X3 [Solanum
           tuberosum]
          Length = 473

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 32/63 (50%), Positives = 42/63 (66%)
 Frame = +3

Query: 3   QPSLVEYDQSSRNLQYAGSSLPMDSGSRHQYPADNYSASRPPEGYGEFQRQRREDFGNAY 182
           Q S  EY+ S+ N  Y+G ++PM+   R+  P DNY  SRP + Y +FQRQRR+DFG AY
Sbjct: 411 QQSYQEYENSAGNPHYSGPNIPMEPRGRYPNPMDNYHPSRPHDSYDDFQRQRRDDFGKAY 470

Query: 183 GRY 191
            RY
Sbjct: 471 NRY 473


>ref|XP_002301525.2| hypothetical protein POPTR_0002s19370g [Populus trichocarpa]
           gi|566158907|ref|XP_006386708.1| zinc knuckle family
           protein [Populus trichocarpa]
           gi|550345378|gb|EEE80798.2| hypothetical protein
           POPTR_0002s19370g [Populus trichocarpa]
           gi|550345379|gb|ERP64505.1| zinc knuckle family protein
           [Populus trichocarpa]
          Length = 461

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 36/63 (57%), Positives = 40/63 (63%)
 Frame = +3

Query: 3   QPSLVEYDQSSRNLQYAGSSLPMDSGSRHQYPADNYSASRPPEGYGEFQRQRREDFGNAY 182
           Q S  EYD SS    YAG+SL MDS  R+    +NYS SRP + YGEFQ  RRE FG AY
Sbjct: 400 QHSYSEYDASSATPHYAGTSLTMDSRPRYSNNMENYS-SRPHDTYGEFQHPRREAFGKAY 458

Query: 183 GRY 191
            RY
Sbjct: 459 NRY 461


>ref|XP_002320966.1| zinc knuckle family protein [Populus trichocarpa]
           gi|222861739|gb|EEE99281.1| zinc knuckle family protein
           [Populus trichocarpa]
          Length = 464

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 37/63 (58%), Positives = 41/63 (65%)
 Frame = +3

Query: 3   QPSLVEYDQSSRNLQYAGSSLPMDSGSRHQYPADNYSASRPPEGYGEFQRQRREDFGNAY 182
           Q S  EYD SS N  YAG+SL MDS +R     +NYS SRP + Y EFQ QRRE FG AY
Sbjct: 403 QHSYSEYDGSSANPYYAGNSLHMDSRARCSNDMENYS-SRPHDTYDEFQHQRREAFGKAY 461

Query: 183 GRY 191
            RY
Sbjct: 462 NRY 464


>ref|XP_006492364.1| PREDICTED: uncharacterized protein LOC102613042 isoform X3 [Citrus
           sinensis]
          Length = 440

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 33/63 (52%), Positives = 41/63 (65%)
 Frame = +3

Query: 3   QPSLVEYDQSSRNLQYAGSSLPMDSGSRHQYPADNYSASRPPEGYGEFQRQRREDFGNAY 182
           Q +   YD SS N +YAG+S PMDS  R+  P + Y  SR  + +G FQRQRRE+FG AY
Sbjct: 379 QHNYSSYDGSSTNSEYAGTSYPMDSRGRYPNPMETY-PSRAHDTHGGFQRQRREEFGKAY 437

Query: 183 GRY 191
            RY
Sbjct: 438 NRY 440


>ref|XP_006492363.1| PREDICTED: uncharacterized protein LOC102613042 isoform X2 [Citrus
           sinensis]
          Length = 464

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 33/63 (52%), Positives = 41/63 (65%)
 Frame = +3

Query: 3   QPSLVEYDQSSRNLQYAGSSLPMDSGSRHQYPADNYSASRPPEGYGEFQRQRREDFGNAY 182
           Q +   YD SS N +YAG+S PMDS  R+  P + Y  SR  + +G FQRQRRE+FG AY
Sbjct: 403 QHNYSSYDGSSTNSEYAGTSYPMDSRGRYPNPMETY-PSRAHDTHGGFQRQRREEFGKAY 461

Query: 183 GRY 191
            RY
Sbjct: 462 NRY 464


>ref|XP_006492362.1| PREDICTED: uncharacterized protein LOC102613042 isoform X1 [Citrus
           sinensis]
          Length = 466

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 33/63 (52%), Positives = 41/63 (65%)
 Frame = +3

Query: 3   QPSLVEYDQSSRNLQYAGSSLPMDSGSRHQYPADNYSASRPPEGYGEFQRQRREDFGNAY 182
           Q +   YD SS N +YAG+S PMDS  R+  P + Y  SR  + +G FQRQRRE+FG AY
Sbjct: 405 QHNYSSYDGSSTNSEYAGTSYPMDSRGRYPNPMETY-PSRAHDTHGGFQRQRREEFGKAY 463

Query: 183 GRY 191
            RY
Sbjct: 464 NRY 466


>ref|XP_006444541.1| hypothetical protein CICLE_v10023332mg [Citrus clementina]
           gi|557546803|gb|ESR57781.1| hypothetical protein
           CICLE_v10023332mg [Citrus clementina]
          Length = 464

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 33/63 (52%), Positives = 41/63 (65%)
 Frame = +3

Query: 3   QPSLVEYDQSSRNLQYAGSSLPMDSGSRHQYPADNYSASRPPEGYGEFQRQRREDFGNAY 182
           Q +   YD SS N +YAG+S PMDS  R+  P + Y  SR  + +G FQRQRRE+FG AY
Sbjct: 403 QHNYSSYDGSSTNSEYAGTSYPMDSRGRYPNPMETY-PSRAHDTHGGFQRQRREEFGKAY 461

Query: 183 GRY 191
            RY
Sbjct: 462 NRY 464


>ref|XP_002886992.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297332833|gb|EFH63251.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 478

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 31/64 (48%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
 Frame = +3

Query: 6   PSLVEYDQ--SSRNLQYAGSSLPMDSGSRHQYPADNYSASRPPEGYGEFQRQRREDFGNA 179
           P   E+D   SS    Y G+++PMDS  R+    DNYS+      YG FQRQRRED+G A
Sbjct: 415 PPYAEFDDGYSSNPPPYGGNNVPMDSKGRYPNHGDNYSSRHQDNNYGGFQRQRREDYGKA 474

Query: 180 YGRY 191
           Y RY
Sbjct: 475 YNRY 478


>ref|XP_002878450.1| zinc knuckle (CCHC-type) family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297324288|gb|EFH54709.1| zinc knuckle
           (CCHC-type) family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 478

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 31/64 (48%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
 Frame = +3

Query: 6   PSLVEYDQ--SSRNLQYAGSSLPMDSGSRHQYPADNYSASRPPEGYGEFQRQRREDFGNA 179
           P   E+D   SS    Y G+++PMDS  R+    DNYS+      YG FQRQRRED+G A
Sbjct: 415 PPYAEFDDGYSSNPPPYGGNNVPMDSKRRYPNHGDNYSSRHQDNNYGGFQRQRREDYGKA 474

Query: 180 YGRY 191
           Y RY
Sbjct: 475 YNRY 478


>dbj|BAC42048.1| unknown protein [Arabidopsis thaliana]
          Length = 171

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 30/64 (46%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
 Frame = +3

Query: 6   PSLVEYDQ--SSRNLQYAGSSLPMDSGSRHQYPADNYSASRPPEGYGEFQRQRREDFGNA 179
           P   E+D   SS    Y G+++PMDS  R+    DNYS+      YG FQRQRRE++G A
Sbjct: 108 PPYAEFDDGYSSNPPPYGGNNMPMDSKGRYPNHGDNYSSRHQDNNYGGFQRQRREEYGKA 167

Query: 180 YGRY 191
           Y RY
Sbjct: 168 YNRY 171


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