BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00028600
         (3268 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001105471.1| homeobox3 [Zea mays] gi|1143705|emb|CAA61909...   334   2e-88
tpg|DAA57633.1| TPA: putative homeodomain-like transcription fac...   331   1e-87
ref|XP_002458483.1| hypothetical protein SORBIDRAFT_03g034510 [S...   323   2e-85
gb|EMT16215.1| Homeobox protein HOX1A [Aegilops tauschii]             312   7e-82
ref|XP_004961485.1| PREDICTED: homeobox protein HOX1A-like [Seta...   305   7e-80
ref|XP_004289744.1| PREDICTED: uncharacterized protein LOC101296...   302   7e-79
ref|NP_001105918.1| HOX1B protein [Zea mays] gi|1648931|emb|CAA6...   301   1e-78
gb|AFW78862.1| putative homeodomain-like transcription factor su...   300   2e-78
gb|AFW78854.1| putative homeodomain-like transcription factor su...   298   1e-77
ref|NP_001105447.1| homeobox protein HOX1A [Zea mays] gi|1170434...   295   7e-77
emb|CAB51951.1| homeodomain transcription factor [Zea mays]           294   2e-76
dbj|BAC15622.1| PHD-finger family homeodomain protein [Oryza sat...   289   5e-75
ref|NP_001057214.1| Os06g0229300 [Oryza sativa Japonica Group] g...   289   5e-75
ref|XP_006643655.1| PREDICTED: homeobox protein HOX1A-like isofo...   287   2e-74
ref|XP_006643653.1| PREDICTED: homeobox protein HOX1A-like isofo...   287   2e-74
ref|XP_003569804.1| PREDICTED: homeobox protein HOX1A-like [Brac...   286   5e-74
ref|XP_003566033.1| PREDICTED: homeobox protein HOX1A-like [Brac...   286   5e-74
gb|EEC80271.1| hypothetical protein OsI_22252 [Oryza sativa Indi...   285   9e-74
gb|EAZ42623.1| hypothetical protein OsJ_27188 [Oryza sativa Japo...   285   9e-74
dbj|BAJ99831.1| predicted protein [Hordeum vulgare subsp. vulgare]    282   8e-73

>ref|NP_001105471.1| homeobox3 [Zea mays] gi|1143705|emb|CAA61909.1| Hox2a [Zea mays]
          Length = 1576

 Score =  334 bits (856), Expect = 2e-88
 Identities = 220/613 (35%), Positives = 310/613 (50%), Gaps = 6/613 (0%)
 Frame = +3

Query: 441  CEQDDDENTISASGAQNNVAKSNKKRKKASQTPWPSRYPLRSSVAGVRVLRSSSSAAKIS 620
            C   + +N  S+    ++ A     RKK       +  P      GVRVLRS+S     +
Sbjct: 294  CSTSERKNEASSEPLNDSTAAQPAARKKKGGAMPKTDNPK----IGVRVLRSASGKKNET 349

Query: 621  NEQSIPASNSIKNXXXXXXXXXXXSMLN--NEFALIRKRIRYLLNRINYEQSLIDAYSHE 794
              + +  S S +                   ++  I +RI+Y+LNR+ YEQ+ I AY+ E
Sbjct: 350  CTEPVNRSTSREPTVTKKRNCKPSKDRGPKKDYLKICQRIKYILNRMKYEQAFIQAYASE 409

Query: 795  GWKGQNLEKIRPEKELERAKSEILRCKLRIRESMCHLDSLLSEGRPDENMFDN-DEIDYE 971
            GWKGQ+LEKIRPEKELERAK+EIL+CKLRIRE+  ++DSLLS+G+ +E++FD+  +I  E
Sbjct: 410  GWKGQSLEKIRPEKELERAKAEILQCKLRIREAFRNMDSLLSKGKLEESLFDSAGQISSE 469

Query: 972  NIICATCDSKDLSTDNDIILCDGSCERGFHQKCLSPPLQTHEIPPGDQGWLCPACDCKVD 1151
            +I CA C SKD+++ NDIILCDG+C+RGFHQ CLSPPL T EIPPGD+GWLCPAC CK D
Sbjct: 470  DIFCAICGSKDVTSQNDIILCDGACDRGFHQNCLSPPLLTEEIPPGDEGWLCPACVCKAD 529

Query: 1152 CFNLLNEFQGSTLTIEDTWEKVFPEAAVIANGNNQLXXXXXXXXXXXXXXXXXXVEVAAX 1331
              + LNE QGS L+I D+W KVFPEAA  ANG+ Q+                  V     
Sbjct: 530  YIDALNELQGSKLSIHDSWVKVFPEAASTANGSKQVDASDLLPDHIKDSANLALVGTHMV 589

Query: 1332 XXXXXXXXXXXXXXXXXXXXXXXVGYNNVDVLGXXXXXXXXXXXXXXXXXPNKDDQNEGP 1511
                                      +  D LG                  ++D  + G 
Sbjct: 590  NEIRFSEEDD----------------SKADDLGLPSEDSGDGDFDPAGPDSSEDQND-GL 632

Query: 1512 ASNESDFTSDSDEFCLELSKRVNVDEVTSSQLDS--RMADCSQEGXXXXXXXXXXXXHPP 1685
             S ESDFTSDSD FC E++K    DEV++S L +     D  +              H  
Sbjct: 633  NSEESDFTSDSDYFCAEIAKSCGQDEVSASPLSNVINRTDRMKLRAYSRRSNEENHNHAF 692

Query: 1686 M-VEADFDNSCPVPKTRQQQRLDYEKLNDVSYXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1862
            M +E + D   PVP  RQ +RLDY+KL D +Y                            
Sbjct: 693  MDMELEQDIVLPVPSRRQVERLDYKKLYDEAY---------------------------E 725

Query: 1863 RESASLSYGRSYSVNHQRNLSIKDMVDVPPLAMLNPDQQQVLEPAEKSTPKTQQYLNEQH 2042
             ES++ S    +S       S  D +D P        +    +   + TP+++ + +   
Sbjct: 726  EESSNSSDEEEWSGKELLEGSGTDSLDEPSSCKRLSRRAPAGQQNNELTPQSRPHGSNSE 785

Query: 2043 INDHLHAENGNKTTSTGKKSYAPHVNQRLEETFKQNQYPSQEVKGSLSKELGLTTTQIAK 2222
                +   NG  ++STG+K Y P V Q+L+  F+++ YPS+E K +LS+ELGLT  Q++K
Sbjct: 786  QKTEVLRSNG--SSSTGRK-YDPEVTQKLKVHFEKDPYPSRETKENLSEELGLTFNQVSK 842

Query: 2223 WFAKSRAKLRISA 2261
            WF+ +R   R+++
Sbjct: 843  WFSSTRHYSRVAS 855


>tpg|DAA57633.1| TPA: putative homeodomain-like transcription factor superfamily
            protein [Zea mays]
          Length = 1577

 Score =  331 bits (848), Expect = 1e-87
 Identities = 225/618 (36%), Positives = 311/618 (50%), Gaps = 11/618 (1%)
 Frame = +3

Query: 441  CEQDDDENTISASGAQNNVAKSNKKRKKASQTPWPSRYPLRSSVAGVRVLRSSSSAAKIS 620
            C   +  N  S+    ++ A     RKK       +  P      GVRVLRS+S     +
Sbjct: 294  CSTSERANEASSEPLNDSTAAQPAARKKKGGAMPKTDNPK----IGVRVLRSASGKKNET 349

Query: 621  NEQSIPASNSIKNXXXXXXXXXXXSMLN--NEFALIRKRIRYLLNRINYEQSLIDAYSHE 794
              + +  S S +               +   ++  I +RI+Y+LNR+ YEQ+ I AY+ E
Sbjct: 350  CTEPVNGSTSAEPTVTKKRNCKPSKDRSPKKDYLKICQRIKYILNRMKYEQAFIQAYASE 409

Query: 795  GWKGQNLEKIRPEKELERAKSEILRCKLRIRESMCHLDSLLSEGRPDENMFDN-DEIDYE 971
            GWKGQ+LEKIRPEKELERAK+EIL+CKLRIRE+  ++DSLLS+G+ +E++FD+  +I  E
Sbjct: 410  GWKGQSLEKIRPEKELERAKAEILQCKLRIREAFRNMDSLLSKGKLEESLFDSAGQISSE 469

Query: 972  NIICATCDSKDLSTDNDIILCDGSCERGFHQKCLSPPLQTHEIPPGDQGWLCPACDCKVD 1151
            +I CA C SKD+++ NDIILCDG+C+RGFHQ CLSPPL T EIPPGD+GWLCPAC CK D
Sbjct: 470  DIFCAICGSKDVTSQNDIILCDGACDRGFHQNCLSPPLLTEEIPPGDEGWLCPACVCKAD 529

Query: 1152 CFNLLNEFQGSTLTIEDTWEKVFPEAAVIANGNNQLXXXXXXXXXXXXXXXXXXVEVAAX 1331
              + LNE QGS L+I D+W KVFPEAA  ANG+ Q+                  V     
Sbjct: 530  YIDALNELQGSKLSIHDSWVKVFPEAASTANGSKQVDASDLLPDHIKDSANLALVGTHMV 589

Query: 1332 XXXXXXXXXXXXXXXXXXXXXXXVGYNNVDVLGXXXXXXXXXXXXXXXXXPNKDDQNEGP 1511
                                      +  D LG                  ++D  + G 
Sbjct: 590  NEIRFSEEDD----------------SKADDLGLPSEDSGDGDFDPAGPDSSEDQND-GL 632

Query: 1512 ASNESDFTSDSDEFCLELSKRVNVDEVTSSQLDS--RMADCSQEGXXXXXXXXXXXXHPP 1685
             S ESDFTSDSD FC E++K    DEV++S L +     D  +              H  
Sbjct: 633  NSEESDFTSDSDYFCAEIAKSCGQDEVSASPLSNVINRTDRMKLRAYSRRSNEENHNHAF 692

Query: 1686 M-VEADFDNSCPVPKTRQQQRLDYEKLNDVSYXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1862
            M +E + D   PVP  RQ +RLDY+KL D +Y                            
Sbjct: 693  MDMELEQDIVLPVPSRRQVERLDYKKLYDEAY---------------------------E 725

Query: 1863 RESASLSYGRSYSVNHQRNLSIKDMVD-----VPPLAMLNPDQQQVLEPAEKSTPKTQQY 2027
             ES++ S    +S       S  D +D     V   +   P  QQ  E   +S P     
Sbjct: 726  EESSNSSDEEEWSGKELLEGSGTDSLDERLRPVKRCSRRAPAGQQNNELTPQSRPHGS-- 783

Query: 2028 LNEQHINDHLHAENGNKTTSTGKKSYAPHVNQRLEETFKQNQYPSQEVKGSLSKELGLTT 2207
             N +   + L +   N ++STG+K Y P V Q+L+  F+++ YPS+E K +LS+ELGLT 
Sbjct: 784  -NSEQKTEVLRS---NGSSSTGRK-YDPEVTQKLKVHFEKDPYPSRETKENLSEELGLTF 838

Query: 2208 TQIAKWFAKSRAKLRISA 2261
             Q++KWF+ +R   R+++
Sbjct: 839  NQVSKWFSSTRHYSRVAS 856


>ref|XP_002458483.1| hypothetical protein SORBIDRAFT_03g034510 [Sorghum bicolor]
            gi|241930458|gb|EES03603.1| hypothetical protein
            SORBIDRAFT_03g034510 [Sorghum bicolor]
          Length = 1582

 Score =  323 bits (829), Expect = 2e-85
 Identities = 208/573 (36%), Positives = 294/573 (51%), Gaps = 11/573 (1%)
 Frame = +3

Query: 576  GVRVLRSSSSAAKISNEQSIPASNSIKNXXXXXXXXXXXSMLN--NEFALIRKRIRYLLN 749
            GVRVLRS+S+    +  + +  S S +               +   ++  I +R+RY+LN
Sbjct: 340  GVRVLRSASAKKNEACSEPVNDSTSAEPTVTKRRICKPSKDRSPKKDYLKICQRVRYILN 399

Query: 750  RINYEQSLIDAYSHEGWKGQNLEKIRPEKELERAKSEILRCKLRIRESMCHLDSLLSEGR 929
            R+NY+Q+ I AY+ EGWKGQ++EKIRPEKELERAK EIL+CKLRIRE+  ++DSLLS+G+
Sbjct: 400  RMNYQQTFIQAYASEGWKGQSVEKIRPEKELERAKEEILQCKLRIREAFRNMDSLLSKGK 459

Query: 930  PDENMFDN-DEIDYENIICATCDSKDLSTDNDIILCDGSCERGFHQKCLSPPLQTHEIPP 1106
             +E++FD+  EI  E+I CA C SKD++  NDIILCDG+C+RGFHQ CL+PPL T +IPP
Sbjct: 460  LEESLFDSAGEISSEDIFCAVCGSKDVTLQNDIILCDGACDRGFHQNCLNPPLLTEDIPP 519

Query: 1107 GDQGWLCPACDCKVDCFNLLNEFQGSTLTIEDTWEKVFPEAAVIANGNNQLXXXXXXXXX 1286
            GD+GWLCPAC CK D  + LNE QGS L+I D+WEKVFPEAA IANG+ Q+         
Sbjct: 520  GDEGWLCPACVCKADSIDALNELQGSKLSIHDSWEKVFPEAASIANGSKQVDASDLLPDH 579

Query: 1287 XXXXXXXXXVEVAAXXXXXXXXXXXXXXXXXXXXXXXXVGYNNVDVLGXXXXXXXXXXXX 1466
                      E                                 D LG            
Sbjct: 580  IKDSDNLALAE----------------GHMVNEVRFSAEDDTKADDLGLPSEDSGDGDFD 623

Query: 1467 XXXXXPNKDDQNEGPASNESDFTSDSDEFCLELSKRVNVDEVTSSQLDSRMADCSQEGXX 1646
                  ++D ++ G  S ESDFTSDSD+FC E++K    DEV +S L + +    +    
Sbjct: 624  PAGPDSSEDQKD-GLNSEESDFTSDSDDFCAEIAKSCGQDEVLASPLSNVINRTDRMKLR 682

Query: 1647 XXXXXXXXXXHPPMVEADFDNSCPVPKTRQQQRLDYEKLNDVSYXXXXXXXXXXXXXXXX 1826
                      H     A  D   PV   RQ + LDY+KL D +Y                
Sbjct: 683  AAGNRSNEENHN---NAFMDMELPVSSRRQVEPLDYKKLYDEAY---------------- 723

Query: 1827 XXXXXXXXXXXXRESASLSYGRSYSVNHQRNLSIKDMVDVPPLAMLNPDQQQVLEPAEKS 2006
                         ES++ S    +S       S  D +          ++ + ++   + 
Sbjct: 724  -----------EEESSNSSDEEEWSGKELLEGSETDSLG---------ERLRPVKRCSRK 763

Query: 2007 TPKTQQYLNEQHINDHLHAENGNKT--------TSTGKKSYAPHVNQRLEETFKQNQYPS 2162
             P  QQ  N +H       E+  KT        +STG+K + P V Q+L+  F+++ YPS
Sbjct: 764  APAGQQ--NIEHTPQKFGPESEQKTEILRSNGSSSTGRK-FGPVVTQKLKVHFEKDPYPS 820

Query: 2163 QEVKGSLSKELGLTTTQIAKWFAKSRAKLRISA 2261
            +E K +LS+ELGLT  Q+++WF+ +R   R+++
Sbjct: 821  RETKVNLSEELGLTFNQVSRWFSSTRHYSRVAS 853


>gb|EMT16215.1| Homeobox protein HOX1A [Aegilops tauschii]
          Length = 1236

 Score =  312 bits (799), Expect = 7e-82
 Identities = 218/639 (34%), Positives = 311/639 (48%), Gaps = 49/639 (7%)
 Frame = +3

Query: 471  SASGAQNNVAKSNKKRKKASQTPWPSRYPLRSSVAGVRVLRSSSSAAKISNEQ------- 629
            S SG + N  ++  + +K S+      YPL+SS + VRVLRS S A K  ++        
Sbjct: 40   SLSGERKNFKRAANRGRKGSRVLSSRTYPLKSSESTVRVLRSRSVADKSPSDAVQTPTER 99

Query: 630  --SIPASNSIKNXXXXXXXXXXXSML-----NNEFALIRKRIRYLLNRINYEQSLIDAYS 788
                P S+S+                     ++E + IRKRIRY+LNR+NY QS ++AY+
Sbjct: 100  AAKKPPSDSVDTLVKPAAKRIKRDRPTKGGPDDELSKIRKRIRYILNRMNYHQSFLEAYA 159

Query: 789  HEGWKGQN----------------LEKIRPEKELERAKSEILRCKLRIRESMCHLDSLLS 920
             EGWK Q+                LEKIRPEKELERAK EI+RCKLRIRE+  +LD LL+
Sbjct: 160  SEGWKNQSVSCNIEILLTHTQTCSLEKIRPEKELERAKVEIVRCKLRIREAFQNLDHLLT 219

Query: 921  EGRPDENMFDND-EIDYENIICATCDSKDLSTDNDIILCDGSCERGFHQKCLSPPLQTHE 1097
             G+ +E++FD++ +I  ++I+CATC  ++ + +NDIILCDG+C+RGFHQ CL+PPL T +
Sbjct: 220  VGKLEESLFDSEGKISSDDIVCATCSLQEATLNNDIILCDGACDRGFHQNCLNPPLLTKD 279

Query: 1098 IPPGDQGWLCPACDCKVDCFNLLNEFQGSTLTIEDTWEKVFPEAAVIANG--NNQLXXXX 1271
            IP G++GWLCPACDCK+DC  L+NE QG+ L I D+WEKVFPEA+ +A+G   N +    
Sbjct: 280  IPEGEEGWLCPACDCKIDCIELINELQGTDLDINDSWEKVFPEASAVAHGPMQNDVADLP 339

Query: 1272 XXXXXXXXXXXXXXVEVAAXXXXXXXXXXXXXXXXXXXXXXXXVGYNN--------VDVL 1427
                           E  A                           N+        VD L
Sbjct: 340  SDDSEDDDFDPNISEEHVAGHAEGSSEEDGDEGSDSDDSNFMTSSDNSEHVKEKVKVDDL 399

Query: 1428 GXXXXXXXXXXXXXXXXXPNKDDQNEGPASNESDFTSDSDEFCLELSKRVNVDEVTSSQL 1607
            G                  +KD + +   S+   FTSDSDEFC E++K  + DEV+S   
Sbjct: 400  GLPSEDSEDDDYDPAGPDSDKDIEEKQDESD---FTSDSDEFCAEITKSCSKDEVSSG-- 454

Query: 1608 DSRMADCSQEGXXXXXXXXXXXXHPPMVEADFDNSCPVPKTRQQQRLDYEKLNDVSYXXX 1787
              ++   + +             H   +E D D   P  K RQ QRLDY+KL D +Y   
Sbjct: 455  -PKVGGRTNDLEGAPVRPNTSMSHSKDLEIDPDVILPSTK-RQVQRLDYKKLYDDTY--- 509

Query: 1788 XXXXXXXXXXXXXXXXXXXXXXXXXRESASLSYGRSYSVNHQRNLSIKDMVDVPPLAMLN 1967
                                        +  S G  +S                 L   N
Sbjct: 510  ------------------------GEAPSESSDGDEWS-------------GKSTLKEEN 532

Query: 1968 PDQQQVLEPAEKSTPKTQQ--------YLNEQHINDHLHAENGNKTTSTGKKSYAPHVNQ 2123
             ++ +V   A KS+  T++         +N+QH    L ++  N  +   K+ + P +N+
Sbjct: 533  EERNEVDSFARKSSRGTREVHPDGFHGLVNDQHAGG-LTSDGSN--SKAKKRHFGPVINE 589

Query: 2124 RLEETFKQNQYPSQEVKGSLSKELGLTTTQIAKWFAKSR 2240
            RL + F  +QYPS+ VK SL++ELGLT  Q+ KWF  +R
Sbjct: 590  RLNQYFTTDQYPSRAVKESLAQELGLTFRQVNKWFESTR 628



 Score = 72.0 bits (175), Expect = 2e-09
 Identities = 43/104 (41%), Positives = 59/104 (56%), Gaps = 4/104 (3%)
 Frame = +3

Query: 2007 TPKTQQYLNEQHIN----DHLHAENGNKTTSTGKKSYAPHVNQRLEETFKQNQYPSQEVK 2174
            TP+  Q      +N    + L   NG+ TT   K+ Y P +NQRL E FK +QYPS+ VK
Sbjct: 1024 TPQRSQQSFHGSVNGQNAEELLTPNGSSTTGQ-KRQYGPIINQRLHEQFKSDQYPSRAVK 1082

Query: 2175 GSLSKELGLTTTQIAKWFAKSRAKLRISATGLKLSDTVYHAETK 2306
             SL++ELGLT  Q+ KWF   R  +R+++   K S  V +  TK
Sbjct: 1083 ESLAQELGLTFRQVEKWFESRRRHIRVASK--KSSTHVENHSTK 1124


>ref|XP_004961485.1| PREDICTED: homeobox protein HOX1A-like [Setaria italica]
          Length = 741

 Score =  305 bits (782), Expect = 7e-80
 Identities = 150/264 (56%), Positives = 193/264 (73%), Gaps = 5/264 (1%)
 Frame = +3

Query: 480  GAQNNVAKSNKKRKKASQTPWPSRYPLRSSVAGVRVLRSSSSAAKISNEQSI----PASN 647
            G + N  ++  + KK SQ      Y LRSS   VRVLR +SS+   S E       PA+ 
Sbjct: 45   GIRKNYKRAANRGKKGSQGLTDKAYTLRSSDNNVRVLRGTSSSKTTSTEHVQTPVQPAAK 104

Query: 648  SIKNXXXXXXXXXXXSMLNNEFALIRKRIRYLLNRINYEQSLIDAYSHEGWKGQNLEKIR 827
              K                +EF+ IRKR+RY+LNR+NYEQSLI+AY+ EGWK Q+L+KIR
Sbjct: 105  RRKRGRPSNKSLSSNKSSTDEFSQIRKRVRYILNRMNYEQSLIEAYASEGWKNQSLDKIR 164

Query: 828  PEKELERAKSEILRCKLRIRESMCHLDSLLSEGRPDENMFDND-EIDYENIICATCDSKD 1004
            PEKELERAK+EILRCKLRIRE   +LDSLLS+G+ DE++FD++ EI  E+I CA C SKD
Sbjct: 165  PEKELERAKAEILRCKLRIREVFQNLDSLLSKGKIDESLFDSEGEISCEDIFCANCGSKD 224

Query: 1005 LSTDNDIILCDGSCERGFHQKCLSPPLQTHEIPPGDQGWLCPACDCKVDCFNLLNEFQGS 1184
            ++  NDIILCDG+C+RGFHQ CL+PPL+T +IP GD+GWLCPACDCK+DC +++N+ QGS
Sbjct: 225  VTLGNDIILCDGACDRGFHQNCLNPPLRTEDIPEGDEGWLCPACDCKIDCIDVINDLQGS 284

Query: 1185 TLTIEDTWEKVFPEAAVIANGNNQ 1256
             L+I+D+WEKVFPEAA +ANG+NQ
Sbjct: 285  DLSIDDSWEKVFPEAATMANGSNQ 308



 Score = 95.5 bits (236), Expect = 1e-16
 Identities = 77/263 (29%), Positives = 111/263 (42%)
 Frame = +3

Query: 1485 NKDDQNEGPASNESDFTSDSDEFCLELSKRVNVDEVTSSQLDSRMADCSQEGXXXXXXXX 1664
            +KD Q +   S+ESDFTSDSD+FC E++K    DEV+S  L     D   E         
Sbjct: 399  DKDIQKKESNSDESDFTSDSDDFCEEIAKTGGHDEVSSPPLPDGKVD-DMEKSTSQANTA 457

Query: 1665 XXXXHPPMVEADFDNSCPVPKTRQQQRLDYEKLNDVSYXXXXXXXXXXXXXXXXXXXXXX 1844
                 P   E D     PV   RQ +RLDY+KL D +Y                      
Sbjct: 458  NSNDDPMETEMDQSVVLPVSGRRQTERLDYKKLYDEAYGEAPSNSSDDEEWSGKSTPRKG 517

Query: 1845 XXXXXXRESASLSYGRSYSVNHQRNLSIKDMVDVPPLAMLNPDQQQVLEPAEKSTPKTQQ 2024
                     A  S   +  V+H   L+                     + A+KS      
Sbjct: 518  HEESEADSPAGKSSRSTRIVHHSDELT--------------------PQSAQKSLHPDSL 557

Query: 2025 YLNEQHINDHLHAENGNKTTSTGKKSYAPHVNQRLEETFKQNQYPSQEVKGSLSKELGLT 2204
            + +    ++ L +   N T+  G   + P +NQ+L E FK   YPS+ VK +L++ELGLT
Sbjct: 558  HGSVDEKHEDLTSNGSNSTSKKG--HFGPVINQKLHEHFKTEPYPSRSVKENLAEELGLT 615

Query: 2205 TTQIAKWFAKSRAKLRISATGLK 2273
              Q++KWF +SR     +A+ +K
Sbjct: 616  FRQVSKWF-ESRRHFTRAASSMK 637


>ref|XP_004289744.1| PREDICTED: uncharacterized protein LOC101296723 [Fragaria vesca
            subsp. vesca]
          Length = 1227

 Score =  302 bits (773), Expect = 7e-79
 Identities = 230/692 (33%), Positives = 329/692 (47%), Gaps = 45/692 (6%)
 Frame = +3

Query: 399  DAVKDDSREF---HPADCEQD---DDENTISASGAQNNVAKSNKKRKKASQTPWPSRYPL 560
            DA KD ++E    H  D  Q+   +   T S + ++N+     K ++ +S     SR   
Sbjct: 490  DASKDHNKELIKPHTNDATQNSCLEPSETASKNASKNSTQFGCKDKRNSS-----SRRKS 544

Query: 561  RSSVAGVRVLRSSSS----AAKISNE-QSIPASNSIKNXXXXXXXXXXXS-------MLN 704
            RS V+  RVLRS +S    A ++SN   ++  SNS+ N                   +  
Sbjct: 545  RSLVSSDRVLRSRTSEKPEAPELSNNVATLDTSNSVANVSNEKEGKRKKRKKKHRERVAA 604

Query: 705  NEFALIRKRIRYLLNRINYEQSLIDAYSHEGWKGQNLEKIRPEKELERAKSEILRCKLRI 884
            +EF+ IR  +RY LNRINYE+SLIDAYS EGWKG +LEK++PEKEL+RA SEILR K +I
Sbjct: 605  DEFSRIRSHLRYFLNRINYEKSLIDAYSSEGWKGNSLEKLKPEKELQRATSEILRRKSKI 664

Query: 885  RESMCHLDSLLSEGRPDENMFDND-EIDYENIICATCDSKDLSTDNDIILCDGSCERGFH 1061
            R+    LDSL +EG   E++FD + +ID E+I CA C S D+  DNDIILCDG+C+RGFH
Sbjct: 665  RDLFQRLDSLCAEGMFPESLFDEEGQIDSEDIFCAKCGSLDVYADNDIILCDGACDRGFH 724

Query: 1062 QKCLSPPLQTHEIPPGDQGWLCPACDCKVDCFNLLNEFQGSTLTIEDTWEKVFPEAAVIA 1241
            Q CL PPL + EIPP D+GWLCP CDCKVDC +LLN+ QG+ L+I D+WEKVFPEAAV A
Sbjct: 725  QHCLEPPLLSEEIPPDDEGWLCPGCDCKVDCIDLLNDSQGTDLSITDSWEKVFPEAAVAA 784

Query: 1242 NG-----NNQ-LXXXXXXXXXXXXXXXXXXVEVAAXXXXXXXXXXXXXXXXXXXXXXXXV 1403
            +      NNQ L                   EV                           
Sbjct: 785  SAGQHQENNQGLPSEDSDDDDYDPDGPETDEEVQEGESSSDESEYASASDGLETPKT--- 841

Query: 1404 GYNNVDVLGXXXXXXXXXXXXXXXXXPNKDDQNEGPASNESDFTSDSDEFCLELSK-RVN 1580
              N+   LG                 P +D +     S+ SDFTSDS++    L + R +
Sbjct: 842  --NDEQYLGIPSDDSEDDDFNPDAPDPTEDVKQ---GSSSSDFTSDSEDLAAVLDEDRKS 896

Query: 1581 VDEVTSSQLDSRMADCSQEGXXXXXXXXXXXXH------PPMVEAD--FDNSCPVPKTRQ 1736
             +     Q     A     G            H        ++E+D   D S PV   R 
Sbjct: 897  FENGEGPQSSVLEASTLLRGSGGKGSKRGQKRHFIKDELSSLIESDPGQDGSTPVSGKRH 956

Query: 1737 QQRLDYEKLNDVSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXRESASLSYGRSYSVNHQR 1916
             +RLDY+KL+D  Y                            + S     G+  ++  ++
Sbjct: 957  VERLDYKKLHDEEY---GDIPTSDDEEYIETAVPRKRKKGAGQVSPGSLKGKPSTI--KK 1011

Query: 1917 NLSIKDMVDVPPLAMLNPDQQQVLEPAEKSTPKTQQYLNEQHINDHLHAENGNKTTSTGK 2096
              + KD+ D       +PD+    E   + TP+ +   N+   + +   ++  K+ ST  
Sbjct: 1012 GKTTKDIKD-------DPDKN---EHTPRRTPRRKSSANDNSSSPNESLKSSPKSGSTSG 1061

Query: 2097 KS-------YAPHVNQRLEETFKQNQYPSQEVKGSLSKELGLTTTQIAKWFAKSRAKLRI 2255
            ++           V QRL  +FK+NQYP + +K  L++ELG+   Q++KWF  +R  ++ 
Sbjct: 1062 RAKGSTYRRLGEAVTQRLYTSFKENQYPDRSMKERLAQELGVMAKQVSKWFENARHCVK- 1120

Query: 2256 SATGLKLSDTV----YHAETKVQISEGNGLGK 2339
               GL L   +      AET ++ +  +G  K
Sbjct: 1121 --AGLALPQAMRTQPNQAETSIKDAHHDGAQK 1150


>ref|NP_001105918.1| HOX1B protein [Zea mays] gi|1648931|emb|CAA63156.1| HOX1B protein
            [Zea mays]
          Length = 692

 Score =  301 bits (771), Expect = 1e-78
 Identities = 149/260 (57%), Positives = 188/260 (72%), Gaps = 1/260 (0%)
 Frame = +3

Query: 480  GAQNNVAKSNKKRKKASQTPWPSRYPLRSSVAGVRVLRSSSSAAKISNEQSIPASNSIKN 659
            G + N  ++  + KK SQ      Y LRSS   VRVLRS+S +   S E   P       
Sbjct: 46   GIRKNYKRAANRGKKGSQGLTGQAYTLRSSDIDVRVLRSTSGSKTTSTEHVQPPGQPAAK 105

Query: 660  XXXXXXXXXXXSMLNNEFALIRKRIRYLLNRINYEQSLIDAYSHEGWKGQNLEKIRPEKE 839
                       S   +EF+ IRKR+RY+LNR+NYEQSLI+AY+ EGWK Q+L+KIRPEKE
Sbjct: 106  RRKRSRASNKNS--TDEFSQIRKRVRYILNRMNYEQSLIEAYASEGWKNQSLDKIRPEKE 163

Query: 840  LERAKSEILRCKLRIRESMCHLDSLLSEGRPDENMFDND-EIDYENIICATCDSKDLSTD 1016
            LERAKSEILRCKLRIRE   ++DSLLS+G+ DE++FD++ EI  E+I CATC SK+ +  
Sbjct: 164  LERAKSEILRCKLRIREVFQNIDSLLSKGKIDESLFDSEGEISCEDIFCATCGSKNATLG 223

Query: 1017 NDIILCDGSCERGFHQKCLSPPLQTHEIPPGDQGWLCPACDCKVDCFNLLNEFQGSTLTI 1196
            NDIILCDG+C+RGFHQ CL+PPL+T +IP GD+GWLCPACDCK+DC +L+NE QGS ++I
Sbjct: 224  NDIILCDGACDRGFHQNCLNPPLRTEDIPMGDEGWLCPACDCKLDCIDLINELQGSDISI 283

Query: 1197 EDTWEKVFPEAAVIANGNNQ 1256
            ED WEKVFPEAA + NG+ Q
Sbjct: 284  EDPWEKVFPEAAAMTNGSKQ 303


>gb|AFW78862.1| putative homeodomain-like transcription factor superfamily protein
            [Zea mays]
          Length = 692

 Score =  300 bits (769), Expect = 2e-78
 Identities = 149/260 (57%), Positives = 188/260 (72%), Gaps = 1/260 (0%)
 Frame = +3

Query: 480  GAQNNVAKSNKKRKKASQTPWPSRYPLRSSVAGVRVLRSSSSAAKISNEQSIPASNSIKN 659
            G + N  ++  + KK SQ      Y LRSS   VRVLRS+S +   S E   P       
Sbjct: 46   GIRKNYKRAANRGKKGSQGLTGQAYTLRSSDIDVRVLRSTSGSKTTSTEHVQPPGQPAAK 105

Query: 660  XXXXXXXXXXXSMLNNEFALIRKRIRYLLNRINYEQSLIDAYSHEGWKGQNLEKIRPEKE 839
                       S   +EF+ IRKR+RY+LNR+NYEQSLI+AY+ EGWK Q+L+KIRPEKE
Sbjct: 106  RRKRSRASNKNS--TDEFSQIRKRVRYILNRMNYEQSLIEAYASEGWKNQSLDKIRPEKE 163

Query: 840  LERAKSEILRCKLRIRESMCHLDSLLSEGRPDENMFDND-EIDYENIICATCDSKDLSTD 1016
            LERAKSEILRCKLRIRE   ++DSLLS+G+ DE++FD++ EI  E+I CATC SK+ +  
Sbjct: 164  LERAKSEILRCKLRIREVFQNIDSLLSKGKIDESLFDSEGEISCEDIFCATCGSKNATLG 223

Query: 1017 NDIILCDGSCERGFHQKCLSPPLQTHEIPPGDQGWLCPACDCKVDCFNLLNEFQGSTLTI 1196
            NDIILCDG+C+RGFHQ CL+PPL+T +IP GD+GWLCPACDCK+DC +L+NE QGS ++I
Sbjct: 224  NDIILCDGACDRGFHQNCLNPPLRTEDIPMGDEGWLCPACDCKLDCIDLINELQGSDISI 283

Query: 1197 EDTWEKVFPEAAVIANGNNQ 1256
            ED WEKVFPEAA +AN + Q
Sbjct: 284  EDPWEKVFPEAAAMANSSKQ 303


>gb|AFW78854.1| putative homeodomain-like transcription factor superfamily protein
            [Zea mays]
          Length = 693

 Score =  298 bits (763), Expect = 1e-77
 Identities = 147/260 (56%), Positives = 187/260 (71%), Gaps = 1/260 (0%)
 Frame = +3

Query: 480  GAQNNVAKSNKKRKKASQTPWPSRYPLRSSVAGVRVLRSSSSAAKISNEQSIPASNSIKN 659
            G + N  ++  + KK S+      Y LRSS   VRVLRS+S +   S E   P       
Sbjct: 47   GIRKNYKRAANRGKKGSEGLTGQAYTLRSSDIDVRVLRSTSGSKTTSTEHVQPPGQPAAK 106

Query: 660  XXXXXXXXXXXSMLNNEFALIRKRIRYLLNRINYEQSLIDAYSHEGWKGQNLEKIRPEKE 839
                       S   +EF+ IRKR+RY+LNR+NYEQSLI+AY+ EGWK Q+L+K RPEKE
Sbjct: 107  RRKRSRASNKNS--TDEFSQIRKRVRYILNRMNYEQSLIEAYASEGWKNQSLDKTRPEKE 164

Query: 840  LERAKSEILRCKLRIRESMCHLDSLLSEGRPDENMFDND-EIDYENIICATCDSKDLSTD 1016
            LERAKSEILRCKLRIRE   ++DSLLS+G+ DE++FD++ EI  E+I CATC SK+ +  
Sbjct: 165  LERAKSEILRCKLRIREVFQNIDSLLSKGKIDESLFDSEGEISCEDIFCATCGSKNATLG 224

Query: 1017 NDIILCDGSCERGFHQKCLSPPLQTHEIPPGDQGWLCPACDCKVDCFNLLNEFQGSTLTI 1196
            NDIILCDG+C+RGFHQ CL+PPL+T +IP GD+GWLCPACDCK+DC +L+NE QGS ++I
Sbjct: 225  NDIILCDGACDRGFHQNCLNPPLRTEDIPMGDEGWLCPACDCKLDCIDLINELQGSDISI 284

Query: 1197 EDTWEKVFPEAAVIANGNNQ 1256
            ED WEKVFPEAA + NG+ Q
Sbjct: 285  EDPWEKVFPEAAAMTNGSKQ 304


>ref|NP_001105447.1| homeobox protein HOX1A [Zea mays] gi|1170434|sp|P46605.1|HOX1A_MAIZE
            RecName: Full=Homeobox protein HOX1A
            gi|22331|emb|CAA47859.1| Zmhox1a homeobox protein [Zea
            mays]
          Length = 719

 Score =  295 bits (756), Expect = 7e-77
 Identities = 146/261 (55%), Positives = 189/261 (72%), Gaps = 2/261 (0%)
 Frame = +3

Query: 480  GAQNNVAKSNKKRKKASQTPWPSRYPLRSSVAGVRVLRSSSSAAKISNEQ-SIPASNSIK 656
            G + N  ++  + KK SQ      Y L SS + VRVLRS+SS+   S E    P   + K
Sbjct: 46   GIRKNYKRAANRGKKGSQGLTGQAYTLMSSNSDVRVLRSTSSSKTTSTEHVQAPVQPAAK 105

Query: 657  NXXXXXXXXXXXSMLNNEFALIRKRIRYLLNRINYEQSLIDAYSHEGWKGQNLEKIRPEK 836
                        +   +EF+ IRKR+RY+LNR+NYEQSLI+AY+ EGWK Q+L+KIRPEK
Sbjct: 106  RRKMSRASNKSST---DEFSQIRKRVRYILNRMNYEQSLIEAYASEGWKNQSLDKIRPEK 162

Query: 837  ELERAKSEILRCKLRIRESMCHLDSLLSEGRPDENMFDND-EIDYENIICATCDSKDLST 1013
            ELERAKSEILRCKLRIRE   ++DSLLS+G+ DE +FD++ EI  E+I C+TC S D + 
Sbjct: 163  ELERAKSEILRCKLRIREVFRNIDSLLSKGKIDETLFDSEGEISCEDIFCSTCGSNDATL 222

Query: 1014 DNDIILCDGSCERGFHQKCLSPPLQTHEIPPGDQGWLCPACDCKVDCFNLLNEFQGSTLT 1193
             NDIILCDG+C+RGFHQ CL+PPL+T +IP GD+GWLCPACDCK+DC +L+NE  GS ++
Sbjct: 223  GNDIILCDGACDRGFHQNCLNPPLRTEDIPMGDEGWLCPACDCKIDCIDLINELHGSNIS 282

Query: 1194 IEDTWEKVFPEAAVIANGNNQ 1256
            IED+WEKVFP+AA +AN + Q
Sbjct: 283  IEDSWEKVFPDAAAMANDSKQ 303



 Score = 90.9 bits (224), Expect = 3e-15
 Identities = 79/266 (29%), Positives = 119/266 (44%), Gaps = 5/266 (1%)
 Frame = +3

Query: 1482 PNKD-DQNEGPASNESDFTSDSDEFCLELSKRVNVDEVTSSQL-DSRMADCSQEGXXXXX 1655
            P+ D D  +  +S+ESDFTSDSD+FC E+SK  + DEV+S  L D+++ D   E      
Sbjct: 386  PDSDKDVEKKSSSDESDFTSDSDDFCKEISKSGH-DEVSSPLLPDAKVGD--MEKITAQA 442

Query: 1656 XXXXXXXHPPMVEADFDNSCPVPKTRQQQRLDYEKLNDVSYXXXXXXXXXXXXXXXXXXX 1835
                    P   E D     P  + RQ +RLDY+KL D +Y                   
Sbjct: 443  KTTSSADDPMETEIDQGVVLPDSRRRQAERLDYKKLYDEAYG------------------ 484

Query: 1836 XXXXXXXXXRESASLSYGRSYSVNHQRNLSIKDMVDVPPLAMLNPDQQQVLEPAEKSTPK 2015
                        AS         + +    IK   +    +      + V    E +T  
Sbjct: 485  -----------EASSDSSDDEEWSGKNTPIIKSNEEGEANSPAGKGSRVVHHNDELTTQS 533

Query: 2016 TQQYLNEQH--INDHLHAENGNKTTSTGKKS-YAPHVNQRLEETFKQNQYPSQEVKGSLS 2186
            T++ L+  H  +++       N + ST +K  + P +NQ+L E FK   YPS+ VK SL+
Sbjct: 534  TKKSLHSIHGSVDEKPGDLTSNGSNSTARKGHFGPVINQKLHEHFKTQPYPSRSVKESLA 593

Query: 2187 KELGLTTTQIAKWFAKSRAKLRISAT 2264
            +ELGLT  Q+ KWF   R   R++++
Sbjct: 594  EELGLTFRQVNKWFETRRHSARVASS 619


>emb|CAB51951.1| homeodomain transcription factor [Zea mays]
          Length = 719

 Score =  294 bits (752), Expect = 2e-76
 Identities = 145/261 (55%), Positives = 189/261 (72%), Gaps = 2/261 (0%)
 Frame = +3

Query: 480  GAQNNVAKSNKKRKKASQTPWPSRYPLRSSVAGVRVLRSSSSAAKISNEQ-SIPASNSIK 656
            G + N  ++  + KK SQ      Y L SS + VRVLRS+SS+   S E    P   + K
Sbjct: 46   GIRKNYKRAANRGKKGSQGLTGQAYTLMSSNSDVRVLRSTSSSKTTSTEHVQAPVQPAAK 105

Query: 657  NXXXXXXXXXXXSMLNNEFALIRKRIRYLLNRINYEQSLIDAYSHEGWKGQNLEKIRPEK 836
                        +   +EF+ IRK++RY+LNR+NYEQSLI+AY+ EGWK Q+L+KIRPEK
Sbjct: 106  RRKMSRASNKSST---DEFSQIRKQVRYILNRMNYEQSLIEAYASEGWKNQSLDKIRPEK 162

Query: 837  ELERAKSEILRCKLRIRESMCHLDSLLSEGRPDENMFDND-EIDYENIICATCDSKDLST 1013
            ELERAKSEILRCKLRIRE   ++DSLLS+G+ DE +FD++ EI  E+I C+TC S D + 
Sbjct: 163  ELERAKSEILRCKLRIREVFRNIDSLLSKGKIDETLFDSEGEISCEDIFCSTCGSNDATL 222

Query: 1014 DNDIILCDGSCERGFHQKCLSPPLQTHEIPPGDQGWLCPACDCKVDCFNLLNEFQGSTLT 1193
             NDIILCDG+C+RGFHQ CL+PPL+T +IP GD+GWLCPACDCK+DC +L+NE  GS ++
Sbjct: 223  GNDIILCDGACDRGFHQNCLNPPLRTEDIPMGDEGWLCPACDCKIDCIDLINELHGSNIS 282

Query: 1194 IEDTWEKVFPEAAVIANGNNQ 1256
            IED+WEKVFP+AA +AN + Q
Sbjct: 283  IEDSWEKVFPDAAAMANDSKQ 303



 Score = 90.9 bits (224), Expect = 3e-15
 Identities = 79/266 (29%), Positives = 119/266 (44%), Gaps = 5/266 (1%)
 Frame = +3

Query: 1482 PNKD-DQNEGPASNESDFTSDSDEFCLELSKRVNVDEVTSSQL-DSRMADCSQEGXXXXX 1655
            P+ D D  +  +S+ESDFTSDSD+FC E+SK  + DEV+S  L D+++ D   E      
Sbjct: 386  PDSDKDVEKKSSSDESDFTSDSDDFCKEISKSGH-DEVSSPLLPDAKVGD--MEKITAQA 442

Query: 1656 XXXXXXXHPPMVEADFDNSCPVPKTRQQQRLDYEKLNDVSYXXXXXXXXXXXXXXXXXXX 1835
                    P   E D     P  + RQ +RLDY+KL D +Y                   
Sbjct: 443  KTTSSADDPMETEIDQGVVLPDSRRRQAERLDYKKLYDEAYG------------------ 484

Query: 1836 XXXXXXXXXRESASLSYGRSYSVNHQRNLSIKDMVDVPPLAMLNPDQQQVLEPAEKSTPK 2015
                        AS         + +    IK   +    +      + V    E +T  
Sbjct: 485  -----------EASSDSSDDEEWSGKNTPIIKSNEEGEANSPAGKGSRVVHHNDELTTQS 533

Query: 2016 TQQYLNEQH--INDHLHAENGNKTTSTGKKS-YAPHVNQRLEETFKQNQYPSQEVKGSLS 2186
            T++ L+  H  +++       N + ST +K  + P +NQ+L E FK   YPS+ VK SL+
Sbjct: 534  TKKSLHSIHGSVDEKPGDLTSNGSNSTARKGHFGPVINQKLHEHFKTQPYPSRSVKESLA 593

Query: 2187 KELGLTTTQIAKWFAKSRAKLRISAT 2264
            +ELGLT  Q+ KWF   R   R++++
Sbjct: 594  EELGLTFRQVNKWFETRRHSARVASS 619


>dbj|BAC15622.1| PHD-finger family homeodomain protein [Oryza sativa Japonica Group]
          Length = 698

 Score =  289 bits (740), Expect = 5e-75
 Identities = 161/341 (47%), Positives = 202/341 (59%), Gaps = 48/341 (14%)
 Frame = +3

Query: 381  DKDSLVDAVKDDSREFHPADCEQDDDENTISASGAQNNVAKSNKKRKKASQTPWPSRYPL 560
            DK +  D V D+      A   Q+        SG +N   ++ K+ +K SQ      YPL
Sbjct: 2    DKTTTSDLVLDNDNIGSNAGSAQEPLTTNGKTSGVRNRYKQTVKRGRKGSQISPSKTYPL 61

Query: 561  RSSVAGVRVLRSSSSAAKISNEQSI-----------------------PASNSIKNXXXX 671
            RSS + VRVLRS+S   K  NE  I                       PA + +      
Sbjct: 62   RSSHSNVRVLRSAS---KKKNETPIVPTNDNTAVQRVAKKRKRSKPLRPAPSRVLRSTSE 118

Query: 672  XXXXXXXSMLNN------------------------EFALIRKRIRYLLNRINYEQSLID 779
                    +LN+                        ++ +IRKR+RY+LNR+NYEQSLI 
Sbjct: 119  KKNKAHNELLNDGAGVQPAEKKRKVGRPPKGGTPKDDYLMIRKRVRYVLNRMNYEQSLIQ 178

Query: 780  AYSHEGWKGQNLEKIRPEKELERAKSEILRCKLRIRESMCHLDSLLSEGRPDENMFDN-D 956
            AY+ EGWKGQ+LEKIRPEKELERAK EILRCK RIRE+  +LDSLLSEG+ DE+MFD+  
Sbjct: 179  AYASEGWKGQSLEKIRPEKELERAKVEILRCKSRIREAFRNLDSLLSEGKLDESMFDSAG 238

Query: 957  EIDYENIICATCDSKDLSTDNDIILCDGSCERGFHQKCLSPPLQTHEIPPGDQGWLCPAC 1136
            EI  E+I CA C SKD++  NDIILCDG C+RGFHQ CL+PPL   +IP GD+GWLCPAC
Sbjct: 239  EISSEDIFCAACGSKDVTLKNDIILCDGICDRGFHQYCLNPPLLAEDIPQGDEGWLCPAC 298

Query: 1137 DCKVDCFNLLNEFQGSTLTIEDTWEKVFPEAAVIANGNNQL 1259
            DCK+DC ++LNE QG  L+I D+WEKVFPEAA   NG+ Q+
Sbjct: 299  DCKIDCIDVLNELQGVKLSIHDSWEKVFPEAASFLNGSKQI 339



 Score = 87.8 bits (216), Expect = 3e-14
 Identities = 66/267 (24%), Positives = 112/267 (41%), Gaps = 8/267 (2%)
 Frame = +3

Query: 1488 KDDQNEGPASNESDFTSDSDEFCLELSKRVNVDEVTSSQLDSRMADCSQEGXXXXXXXXX 1667
            ++D++    S+ESDFTSDSD+FC E++K    DE++             +G         
Sbjct: 431  QNDESNSDQSDESDFTSDSDDFCAEIAKSCGQDEISGPSSSQIRTVDRTDGSGFDGEPNA 490

Query: 1668 XXXHPPMVEADFDNSC--PVPKTRQQQRLDYEKLNDVSYXXXXXXXXXXXXXXXXXXXXX 1841
               +   +E + +     P+   RQ +RLDY+KL + +Y                     
Sbjct: 491  ENSNLAFMETELEQDMVLPISSKRQVERLDYKKLYNEAYGKASSDSSDDEEWYGNSTPEK 550

Query: 1842 XXXXXXXRESASLS------YGRSYSVNHQRNLSIKDMVDVPPLAMLNPDQQQVLEPAEK 2003
                    +S + S      + R   V +  N       +V P   ++  Q +VL     
Sbjct: 551  GNLEDSETDSLAESPQGGKGFSRRAPVRYHNNEHTPQ--NVRPGGSVSDQQTEVL----- 603

Query: 2004 STPKTQQYLNEQHINDHLHAENGNKTTSTGKKSYAPHVNQRLEETFKQNQYPSQEVKGSL 2183
                                 N N +T+  +  + P +NQ+L+  FK++ YPS+  K +L
Sbjct: 604  -------------------CSNSNGSTAKNRH-FGPAINQKLKAHFKEDPYPSRATKENL 643

Query: 2184 SKELGLTTTQIAKWFAKSRAKLRISAT 2264
            ++ELGLT  Q+ KWF+ +R   R++AT
Sbjct: 644  AQELGLTFNQVTKWFSSTRHYARVAAT 670


>ref|NP_001057214.1| Os06g0229300 [Oryza sativa Japonica Group]
            gi|22830607|dbj|BAC15621.1| PHD-finger family homeodomain
            protein [Oryza sativa Japonica Group]
            gi|51535397|dbj|BAD37267.1| PHD-finger family homeodomain
            protein [Oryza sativa Japonica Group]
            gi|113595254|dbj|BAF19128.1| Os06g0229300 [Oryza sativa
            Japonica Group] gi|215768196|dbj|BAH00425.1| unnamed
            protein product [Oryza sativa Japonica Group]
            gi|284431756|gb|ADB84619.1| PHD-finger family homeodomain
            protein [Oryza sativa Japonica Group]
          Length = 792

 Score =  289 bits (740), Expect = 5e-75
 Identities = 161/341 (47%), Positives = 202/341 (59%), Gaps = 48/341 (14%)
 Frame = +3

Query: 381  DKDSLVDAVKDDSREFHPADCEQDDDENTISASGAQNNVAKSNKKRKKASQTPWPSRYPL 560
            DK +  D V D+      A   Q+        SG +N   ++ K+ +K SQ      YPL
Sbjct: 2    DKTTTSDLVLDNDNIGSNAGSAQEPLTTNGKTSGVRNRYKQTVKRGRKGSQISPSKTYPL 61

Query: 561  RSSVAGVRVLRSSSSAAKISNEQSI-----------------------PASNSIKNXXXX 671
            RSS + VRVLRS+S   K  NE  I                       PA + +      
Sbjct: 62   RSSHSNVRVLRSAS---KKKNETPIVPTNDNTAVQRVAKKRKRSKPLRPAPSRVLRSTSE 118

Query: 672  XXXXXXXSMLNN------------------------EFALIRKRIRYLLNRINYEQSLID 779
                    +LN+                        ++ +IRKR+RY+LNR+NYEQSLI 
Sbjct: 119  KKNKAHNELLNDGAGVQPAEKKRKVGRPPKGGTPKDDYLMIRKRVRYVLNRMNYEQSLIQ 178

Query: 780  AYSHEGWKGQNLEKIRPEKELERAKSEILRCKLRIRESMCHLDSLLSEGRPDENMFDN-D 956
            AY+ EGWKGQ+LEKIRPEKELERAK EILRCK RIRE+  +LDSLLSEG+ DE+MFD+  
Sbjct: 179  AYASEGWKGQSLEKIRPEKELERAKVEILRCKSRIREAFRNLDSLLSEGKLDESMFDSAG 238

Query: 957  EIDYENIICATCDSKDLSTDNDIILCDGSCERGFHQKCLSPPLQTHEIPPGDQGWLCPAC 1136
            EI  E+I CA C SKD++  NDIILCDG C+RGFHQ CL+PPL   +IP GD+GWLCPAC
Sbjct: 239  EISSEDIFCAACGSKDVTLKNDIILCDGICDRGFHQYCLNPPLLAEDIPQGDEGWLCPAC 298

Query: 1137 DCKVDCFNLLNEFQGSTLTIEDTWEKVFPEAAVIANGNNQL 1259
            DCK+DC ++LNE QG  L+I D+WEKVFPEAA   NG+ Q+
Sbjct: 299  DCKIDCIDVLNELQGVKLSIHDSWEKVFPEAASFLNGSKQI 339



 Score = 87.8 bits (216), Expect = 3e-14
 Identities = 66/267 (24%), Positives = 112/267 (41%), Gaps = 8/267 (2%)
 Frame = +3

Query: 1488 KDDQNEGPASNESDFTSDSDEFCLELSKRVNVDEVTSSQLDSRMADCSQEGXXXXXXXXX 1667
            ++D++    S+ESDFTSDSD+FC E++K    DE++             +G         
Sbjct: 431  QNDESNSDQSDESDFTSDSDDFCAEIAKSCGQDEISGPSSSQIRTVDRTDGSGFDGEPNA 490

Query: 1668 XXXHPPMVEADFDNSC--PVPKTRQQQRLDYEKLNDVSYXXXXXXXXXXXXXXXXXXXXX 1841
               +   +E + +     P+   RQ +RLDY+KL + +Y                     
Sbjct: 491  ENSNLAFMETELEQDMVLPISSKRQVERLDYKKLYNEAYGKASSDSSDDEEWYGNSTPEK 550

Query: 1842 XXXXXXXRESASLS------YGRSYSVNHQRNLSIKDMVDVPPLAMLNPDQQQVLEPAEK 2003
                    +S + S      + R   V +  N       +V P   ++  Q +VL     
Sbjct: 551  GNLEDSETDSLAESPQGGKGFSRRAPVRYHNNEHTPQ--NVRPGGSVSDQQTEVL----- 603

Query: 2004 STPKTQQYLNEQHINDHLHAENGNKTTSTGKKSYAPHVNQRLEETFKQNQYPSQEVKGSL 2183
                                 N N +T+  +  + P +NQ+L+  FK++ YPS+  K +L
Sbjct: 604  -------------------CSNSNGSTAKNRH-FGPAINQKLKAHFKEDPYPSRATKENL 643

Query: 2184 SKELGLTTTQIAKWFAKSRAKLRISAT 2264
            ++ELGLT  Q+ KWF+ +R   R++AT
Sbjct: 644  AQELGLTFNQVTKWFSSTRHYARVAAT 670


>ref|XP_006643655.1| PREDICTED: homeobox protein HOX1A-like isoform X3 [Oryza brachyantha]
          Length = 814

 Score =  287 bits (734), Expect = 2e-74
 Identities = 155/338 (45%), Positives = 200/338 (59%), Gaps = 45/338 (13%)
 Frame = +3

Query: 381  DKDSLVDAVKDDSREFHPADCEQDDDENTISASGAQNNVAKSNKKRKKASQTPWPSRYPL 560
            DK +  + V D+      A   Q+         G +N   ++ K+ +K SQ      YPL
Sbjct: 2    DKTTTSELVLDNDNAGSNAASAQEPLTTNGKTDGGRNRYKQTAKRGRKGSQISPSKTYPL 61

Query: 561  RSSVAGVRVLRSSSS-----------------------------------AAKISNEQSI 635
            RSS + VR+LRS+S                                      + ++E+  
Sbjct: 62   RSSHSSVRLLRSASKKKNETPTVTTNDNTAVQRVAKKRKRSKPLRPAPSRGLRSASEKKN 121

Query: 636  PASNSIKNXXXXXXXXXXXSMLN---------NEFALIRKRIRYLLNRINYEQSLIDAYS 788
             A N + N             +          N++  IRKR+RY+LNR+NYEQSLI AY+
Sbjct: 122  KAHNELVNDSAGVQPAEKKRKVGRPPKGGTPKNDYLSIRKRVRYILNRMNYEQSLIQAYA 181

Query: 789  HEGWKGQNLEKIRPEKELERAKSEILRCKLRIRESMCHLDSLLSEGRPDENMFDN-DEID 965
             EGWKGQ+LEKIRPEKELERAK+EILRCKLRIRE+   LDSLLSEG+ +E++FD+  EI 
Sbjct: 182  SEGWKGQSLEKIRPEKELERAKAEILRCKLRIREAFQSLDSLLSEGKLEESLFDSAGEIS 241

Query: 966  YENIICATCDSKDLSTDNDIILCDGSCERGFHQKCLSPPLQTHEIPPGDQGWLCPACDCK 1145
             E+I CA C SKD++  NDIILCDG C+RGFHQ CL+PPL    IPPGD+GWLCPACDCK
Sbjct: 242  SEDIFCAICSSKDVTLKNDIILCDGICDRGFHQYCLNPPLLAEHIPPGDEGWLCPACDCK 301

Query: 1146 VDCFNLLNEFQGSTLTIEDTWEKVFPEAAVIANGNNQL 1259
            +DC ++LNE QG  L+I D+WEKVFPEAA   NG+ Q+
Sbjct: 302  LDCIDVLNELQGVKLSIHDSWEKVFPEAASFVNGSKQI 339



 Score = 92.8 bits (229), Expect = 9e-16
 Identities = 94/408 (23%), Positives = 159/408 (38%), Gaps = 27/408 (6%)
 Frame = +3

Query: 1491 DDQNEGPASNESDFTSDSDEFCLELSKRVNVDEVTSSQLDSRMADCSQEGXXXXXXXXXX 1670
            DD++    S+ESDFTSDSD+FC E++K    DE +   L          G          
Sbjct: 434  DDESNSDQSDESDFTSDSDDFCAEIAKSCVQDETSGPSLSQIRTVDHTVGSAFDSEPTAE 493

Query: 1671 XXHPPMVEADFDNSC--PVPKTRQQQRLDYEKLNDVSYXXXXXXXXXXXXXXXXXXXXXX 1844
              +   +EA+ +     PV   RQ +RLDY++L D +Y                      
Sbjct: 494  NSNLAFMEAELEQDMVLPVSSKRQVERLDYKQLYDEAYGKASS----------------- 536

Query: 1845 XXXXXXRESASLSYGRSYSVNHQRNLSIKD---MVDVPPLAMLNPDQQQVLEPAEKSTPK 2015
                   +S+        S + + NL   +   + + P        +  V     + TP+
Sbjct: 537  -------DSSDDEEWSGDSAHQEENLEDSETDLLAESPQRGKNFTRRAAVRHQNNEHTPQ 589

Query: 2016 TQQY---LNEQHINDHLHAENGNKTTSTGKKSYAPHVNQRLEETFKQNQYPSQEVKGSLS 2186
              +    +++Q         NG+   +  K+ + P +NQ+L+E FK++ YPS+  K +L+
Sbjct: 590  NVRSGGSVSDQQTEVLCSDSNGS---AARKRHFGPAINQKLKEYFKEDPYPSRTTKENLA 646

Query: 2187 KELGLTTTQIAKWFAKSRAKLRISAT----GLKLSDTVYHAETKVQISEGNGLGKXXXXX 2354
            +ELGLT  Q+ KWF+ +R   R++AT     ++   +  +    V   E  G  +     
Sbjct: 647  QELGLTFNQVTKWFSSTRHYSRVAATKKENNIENQTSENNNSNTVDSIELRGSNEMVMEK 706

Query: 2355 XXXXXXXXXXXXXXXKNRKTSAIVHNTSSNFSRKNT----------TSSKGIAASDAANR 2504
                           ++           S+F +             T SK I +    +R
Sbjct: 707  ASVDRNDMASEDWMGQSNLNEGFPLGKDSSFGQNVVATPVVHQDCPTVSKEIGSPKCGSR 766

Query: 2505 SSKKTPTSVNKNLEVPFDREKAL-----ARELKRIKTVRELKGIKTGR 2633
             ++   +S N         EK +     A E +R    REL+ +KTGR
Sbjct: 767  ENQGNDSSSNVGTPKVKSSEKTISGLENADEARRKAVQRELRKMKTGR 814


>ref|XP_006643653.1| PREDICTED: homeobox protein HOX1A-like isoform X1 [Oryza brachyantha]
            gi|573911872|ref|XP_006643654.1| PREDICTED: homeobox
            protein HOX1A-like isoform X2 [Oryza brachyantha]
          Length = 836

 Score =  287 bits (734), Expect = 2e-74
 Identities = 155/338 (45%), Positives = 200/338 (59%), Gaps = 45/338 (13%)
 Frame = +3

Query: 381  DKDSLVDAVKDDSREFHPADCEQDDDENTISASGAQNNVAKSNKKRKKASQTPWPSRYPL 560
            DK +  + V D+      A   Q+         G +N   ++ K+ +K SQ      YPL
Sbjct: 2    DKTTTSELVLDNDNAGSNAASAQEPLTTNGKTDGGRNRYKQTAKRGRKGSQISPSKTYPL 61

Query: 561  RSSVAGVRVLRSSSS-----------------------------------AAKISNEQSI 635
            RSS + VR+LRS+S                                      + ++E+  
Sbjct: 62   RSSHSSVRLLRSASKKKNETPTVTTNDNTAVQRVAKKRKRSKPLRPAPSRGLRSASEKKN 121

Query: 636  PASNSIKNXXXXXXXXXXXSMLN---------NEFALIRKRIRYLLNRINYEQSLIDAYS 788
             A N + N             +          N++  IRKR+RY+LNR+NYEQSLI AY+
Sbjct: 122  KAHNELVNDSAGVQPAEKKRKVGRPPKGGTPKNDYLSIRKRVRYILNRMNYEQSLIQAYA 181

Query: 789  HEGWKGQNLEKIRPEKELERAKSEILRCKLRIRESMCHLDSLLSEGRPDENMFDN-DEID 965
             EGWKGQ+LEKIRPEKELERAK+EILRCKLRIRE+   LDSLLSEG+ +E++FD+  EI 
Sbjct: 182  SEGWKGQSLEKIRPEKELERAKAEILRCKLRIREAFQSLDSLLSEGKLEESLFDSAGEIS 241

Query: 966  YENIICATCDSKDLSTDNDIILCDGSCERGFHQKCLSPPLQTHEIPPGDQGWLCPACDCK 1145
             E+I CA C SKD++  NDIILCDG C+RGFHQ CL+PPL    IPPGD+GWLCPACDCK
Sbjct: 242  SEDIFCAICSSKDVTLKNDIILCDGICDRGFHQYCLNPPLLAEHIPPGDEGWLCPACDCK 301

Query: 1146 VDCFNLLNEFQGSTLTIEDTWEKVFPEAAVIANGNNQL 1259
            +DC ++LNE QG  L+I D+WEKVFPEAA   NG+ Q+
Sbjct: 302  LDCIDVLNELQGVKLSIHDSWEKVFPEAASFVNGSKQI 339



 Score = 92.8 bits (229), Expect = 9e-16
 Identities = 94/408 (23%), Positives = 159/408 (38%), Gaps = 27/408 (6%)
 Frame = +3

Query: 1491 DDQNEGPASNESDFTSDSDEFCLELSKRVNVDEVTSSQLDSRMADCSQEGXXXXXXXXXX 1670
            DD++    S+ESDFTSDSD+FC E++K    DE +   L          G          
Sbjct: 434  DDESNSDQSDESDFTSDSDDFCAEIAKSCVQDETSGPSLSQIRTVDHTVGSAFDSEPTAE 493

Query: 1671 XXHPPMVEADFDNSC--PVPKTRQQQRLDYEKLNDVSYXXXXXXXXXXXXXXXXXXXXXX 1844
              +   +EA+ +     PV   RQ +RLDY++L D +Y                      
Sbjct: 494  NSNLAFMEAELEQDMVLPVSSKRQVERLDYKQLYDEAYGKASS----------------- 536

Query: 1845 XXXXXXRESASLSYGRSYSVNHQRNLSIKD---MVDVPPLAMLNPDQQQVLEPAEKSTPK 2015
                   +S+        S + + NL   +   + + P        +  V     + TP+
Sbjct: 537  -------DSSDDEEWSGDSAHQEENLEDSETDLLAESPQRGKNFTRRAAVRHQNNEHTPQ 589

Query: 2016 TQQY---LNEQHINDHLHAENGNKTTSTGKKSYAPHVNQRLEETFKQNQYPSQEVKGSLS 2186
              +    +++Q         NG+   +  K+ + P +NQ+L+E FK++ YPS+  K +L+
Sbjct: 590  NVRSGGSVSDQQTEVLCSDSNGS---AARKRHFGPAINQKLKEYFKEDPYPSRTTKENLA 646

Query: 2187 KELGLTTTQIAKWFAKSRAKLRISAT----GLKLSDTVYHAETKVQISEGNGLGKXXXXX 2354
            +ELGLT  Q+ KWF+ +R   R++AT     ++   +  +    V   E  G  +     
Sbjct: 647  QELGLTFNQVTKWFSSTRHYSRVAATKKENNIENQTSENNNSNTVDSIELRGSNEMVMEK 706

Query: 2355 XXXXXXXXXXXXXXXKNRKTSAIVHNTSSNFSRKNT----------TSSKGIAASDAANR 2504
                           ++           S+F +             T SK I +    +R
Sbjct: 707  ASVDRNDMASEDWMGQSNLNEGFPLGKDSSFGQNVVATPVVHQDCPTVSKEIGSPKCGSR 766

Query: 2505 SSKKTPTSVNKNLEVPFDREKAL-----ARELKRIKTVRELKGIKTGR 2633
             ++   +S N         EK +     A E +R    REL+ +KTGR
Sbjct: 767  ENQGNDSSSNVGTPKVKSSEKTISGLENADEARRKAVQRELRKMKTGR 814


>ref|XP_003569804.1| PREDICTED: homeobox protein HOX1A-like [Brachypodium distachyon]
          Length = 861

 Score =  286 bits (731), Expect = 5e-74
 Identities = 143/273 (52%), Positives = 195/273 (71%), Gaps = 3/273 (1%)
 Frame = +3

Query: 450  DDDENTISASGAQNNVAKSNKKRKKASQTPWPSRYPLRSSVAGVRVLRSSSSAAKISNEQ 629
            D+    + ++     V +S  K K  S+TP      L S+ +  RVLRS+S     +  +
Sbjct: 66   DEPATPLRSAHRSARVLQSTSKNK--SKTPNEPVNILGSTHSSTRVLRSTSKKTAKAPIE 123

Query: 630  SIPASNSIKNXXXXXXXXXXXSMLN--NEFALIRKRIRYLLNRINYEQSLIDAYSHEGWK 803
             +  + + +            +  +  N+   IR+R+RY+LNR+NYEQSLI AY+ EGWK
Sbjct: 124  PVNDNTTFQPAARKRKRGRPSNAASPKNDHIKIRQRVRYILNRMNYEQSLIQAYASEGWK 183

Query: 804  GQNLEKIRPEKELERAKSEILRCKLRIRESMCHLDSLLSEGRPDENMFDND-EIDYENII 980
            GQ+LEKIRPEKEL+RAK+EILRCKLRIRE+  ++DSLLSEG+ +E++FD++ EI  E+I 
Sbjct: 184  GQSLEKIRPEKELQRAKAEILRCKLRIREAFQNMDSLLSEGKLEESLFDSEGEISSEDIF 243

Query: 981  CATCDSKDLSTDNDIILCDGSCERGFHQKCLSPPLQTHEIPPGDQGWLCPACDCKVDCFN 1160
            CA C SK ++  NDIILCDG+C RGFHQKCL+PPL   +IPPGD+GWLCPACDCK+DC +
Sbjct: 244  CAICGSKHVTLRNDIILCDGACVRGFHQKCLNPPLLAQDIPPGDEGWLCPACDCKLDCID 303

Query: 1161 LLNEFQGSTLTIEDTWEKVFPEAAVIANGNNQL 1259
            +LNE QGSTL+I D+WEKVFPE+A++ANG+NQ+
Sbjct: 304  VLNELQGSTLSIHDSWEKVFPESALLANGSNQI 336



 Score = 89.4 bits (220), Expect = 1e-14
 Identities = 79/288 (27%), Positives = 116/288 (40%), Gaps = 6/288 (2%)
 Frame = +3

Query: 1485 NKDDQNEGPASNESDFTSDSDEFCLELSKRVNVDEVTSSQLDSRMADCSQEGXXXXXXXX 1664
            + +DQ     S ESDFTSDSD+FC E++K    DEV+                       
Sbjct: 427  SSEDQKAKTNSEESDFTSDSDDFCAEIAKSCGQDEVSPPSSSDHADGIEISAVDNQLGQE 486

Query: 1665 XXXXHPPMVEADFDNSCPVPKTRQQQRLDYEKLNDVSYXXXXXXXXXXXXXXXXXXXXXX 1844
                     E D D   PV   RQ +RLDY +L D +Y                      
Sbjct: 487  DNNRIIMETELDQDVVLPVSSRRQVERLDYRRLYDEAYGKEMSDSSDDEEWS-------- 538

Query: 1845 XXXXXXRESASLSYGRSYSVNHQRNLSIKD-MVDVPPLAMLNPDQQQVLEPAEKSTPKTQ 2021
                          G S S N   + S  D +      A ++  + Q      K TP+T 
Sbjct: 539  --------------GDSTSSNGNLDDSGTDSLAGSLQFAKIHSRRPQAGHQNNKHTPQTG 584

Query: 2022 QYLNEQHINDHLHAENGNKTTSTGKKSYAPHVNQRLEETFKQNQYPSQEVKGSLSKELGL 2201
            +          +   NG+ +TS  KK + P +NQ+L+   +++ YPS+  K SL++ELGL
Sbjct: 585  RCSVSTGQCSEVLYSNGSSSTSH-KKHFGPIINQKLKVHLEKDPYPSRPTKESLAQELGL 643

Query: 2202 TTTQIAKWFAKSRAKLRISATGLKLSDTVYHAE-----TKVQISEGNG 2330
            T  Q+++WF+ +R   RI+    +     Y AE       +Q  E NG
Sbjct: 644  TFNQVSRWFSSARHYSRIAGAKKEKHPENYTAENDRTAADIQQREPNG 691


>ref|XP_003566033.1| PREDICTED: homeobox protein HOX1A-like [Brachypodium distachyon]
          Length = 963

 Score =  286 bits (731), Expect = 5e-74
 Identities = 144/274 (52%), Positives = 192/274 (70%), Gaps = 17/274 (6%)
 Frame = +3

Query: 477  SGAQNNVAKSNKKRKKASQTPWPSRYPLRSSVAG--VRVLRSSSSAAKISNEQSIPASNS 650
            +G + N  ++  + +K  +      YPLRSS     VRVLRS S+A K  ++ +    +S
Sbjct: 45   TGQRKNYKRTANRGRKGYRVLADRNYPLRSSDCDTTVRVLRSRSAANKPPSDSAHTLVHS 104

Query: 651  IKNXXXXXXXXXXXSML--------------NNEFALIRKRIRYLLNRINYEQSLIDAYS 788
              N                            NNEF+ IR+R+RY+LNR+NYEQSL++AY+
Sbjct: 105  AANKFPSDSVHTLVQPAAKRIKRGRPTKKGPNNEFSKIRQRVRYILNRMNYEQSLLEAYA 164

Query: 789  HEGWKGQNLEKIRPEKELERAKSEILRCKLRIRESMCHLDSLLSEGRPDENMFDND-EID 965
            +EGWK Q+LEKIRPEKELERAK EI+RCKLRIRE+  +LDSLLS G+ DE++FDN+ +I 
Sbjct: 165  NEGWKRQSLEKIRPEKELERAKEEIVRCKLRIREAFQNLDSLLSMGKLDESLFDNEGKIS 224

Query: 966  YENIICATCDSKDLSTDNDIILCDGSCERGFHQKCLSPPLQTHEIPPGDQGWLCPACDCK 1145
             E+IICATC S+ ++ +NDIILCDG C+RGFHQKCL+PPL T +IP GD+GWLCPACDCK
Sbjct: 225  CEDIICATCSSQYVTLNNDIILCDGVCDRGFHQKCLNPPLLTKDIPAGDEGWLCPACDCK 284

Query: 1146 VDCFNLLNEFQGSTLTIEDTWEKVFPEAAVIANG 1247
            +DC +++NE QG+ L+I D+WEKVFPE A +A+G
Sbjct: 285  IDCIDVINELQGTNLSISDSWEKVFPETAALAHG 318



 Score = 80.5 bits (197), Expect = 4e-12
 Identities = 73/261 (27%), Positives = 107/261 (40%), Gaps = 2/261 (0%)
 Frame = +3

Query: 1485 NKDDQNEGPASNESDFTSDSDEFCLELSKRVNVDEVTSSQLDSRMADCSQEGXXXXXXXX 1664
            +KD + +  +SNESD++S SD+FC E++K    + V S            EG        
Sbjct: 603  DKDIEKKQSSSNESDYSSASDDFCGEIAKSCGREGVPSGAKAGGHPTNDLEGTTVRTNAA 662

Query: 1665 XXXXHPPMVEADFDNSCPVPKTRQQQRLDYEKLNDVSYXXXXXXXXXXXXXXXXXXXXXX 1844
                     + D D   PV   RQ Q LD +KL D                         
Sbjct: 663  ISNLPSKDSQMDQDVVSPVSGRRQDQSLDCKKLYDAC----------------------- 699

Query: 1845 XXXXXXRESAS-LSYGRSYSVNHQRNLSIKDMVDV-PPLAMLNPDQQQVLEPAEKSTPKT 2018
                  RE++S  S G  +S         +   D       +        + A +S  +T
Sbjct: 700  ------REASSDSSDGEDWSGKCTPEKDSEKQSDTCRRTGAVRQSNGSTPDNARQSLHRT 753

Query: 2019 QQYLNEQHINDHLHAENGNKTTSTGKKSYAPHVNQRLEETFKQNQYPSQEVKGSLSKELG 2198
                N QH  + L ++  + T    ++ + P + QRL E FK +QYP + VK SL+ ELG
Sbjct: 754  ----NGQHTEELLTSDGSSSTVH--RRQFGPIIYQRLHEHFKTDQYPKRAVKESLANELG 807

Query: 2199 LTTTQIAKWFAKSRAKLRISA 2261
            LT  Q++KWF   R K RI+A
Sbjct: 808  LTFQQVSKWFETRRYKTRIAA 828


>gb|EEC80271.1| hypothetical protein OsI_22252 [Oryza sativa Indica Group]
          Length = 830

 Score =  285 bits (729), Expect = 9e-74
 Identities = 154/309 (49%), Positives = 192/309 (62%), Gaps = 48/309 (15%)
 Frame = +3

Query: 477  SGAQNNVAKSNKKRKKASQTPWPSRYPLRSSVAGVRVLRSSSSAAKISNEQSI------- 635
            SG +N   ++ K+ +K SQ      YPLRSS + VRVLRS+S   K  NE  I       
Sbjct: 72   SGVRNRYKQTVKRGRKGSQISPSKTYPLRSSHSNVRVLRSAS---KKKNETPIVPTNDNT 128

Query: 636  ----------------PASNSIKNXXXXXXXXXXXSMLNN-------------------- 707
                            PA + +              +LN+                    
Sbjct: 129  AVQRVAKKRKRSKPLRPAPSRVLRSTSEKKNKAHNELLNDGAGVQPAEKKRKVGRPPKGG 188

Query: 708  ----EFALIRKRIRYLLNRINYEQSLIDAYSHEGWKGQNLEKIRPEKELERAKSEILRCK 875
                ++ +IRKR+RY+LNR+NYEQSLI AY+ EGWKGQ+LEKIRPEKELERAK EILRCK
Sbjct: 189  TPKDDYLMIRKRVRYVLNRMNYEQSLIQAYASEGWKGQSLEKIRPEKELERAKVEILRCK 248

Query: 876  LRIRESMCHLDSLLSEGRPDENMFDN-DEIDYENIICATCDSKDLSTDNDIILCDGSCER 1052
             RIRE+  +LDSLLSEG+ DE+MFD+  EI  E+I CA C SKD++  NDIILCDG C+R
Sbjct: 249  SRIREAFRNLDSLLSEGKLDESMFDSAGEISSEDIFCAACGSKDVTLKNDIILCDGICDR 308

Query: 1053 GFHQKCLSPPLQTHEIPPGDQGWLCPACDCKVDCFNLLNEFQGSTLTIEDTWEKVFPEAA 1232
            GFHQ CL+PPL   +IP GD+GWLCPACDCK+DC ++LNE QG  L+I D+WEKVFPEAA
Sbjct: 309  GFHQYCLNPPLLAEDIPQGDEGWLCPACDCKIDCIDVLNELQGVKLSIHDSWEKVFPEAA 368

Query: 1233 VIANGNNQL 1259
               NG+ Q+
Sbjct: 369  SFLNGSKQI 377



 Score = 87.8 bits (216), Expect = 3e-14
 Identities = 66/267 (24%), Positives = 112/267 (41%), Gaps = 8/267 (2%)
 Frame = +3

Query: 1488 KDDQNEGPASNESDFTSDSDEFCLELSKRVNVDEVTSSQLDSRMADCSQEGXXXXXXXXX 1667
            ++D++    S+ESDFTSDSD+FC E++K    DE++             +G         
Sbjct: 469  QNDESNSDQSDESDFTSDSDDFCAEIAKSCGQDEISGPSSSQIRTVDRTDGSGFDGEPNA 528

Query: 1668 XXXHPPMVEADFDNSC--PVPKTRQQQRLDYEKLNDVSYXXXXXXXXXXXXXXXXXXXXX 1841
               +   +E + +     P+   RQ +RLDY+KL + +Y                     
Sbjct: 529  ENSNLAFMETELEQDMVLPISSKRQVERLDYKKLYNEAYGKASSDSSDDEEWYGNSTPEK 588

Query: 1842 XXXXXXXRESASLS------YGRSYSVNHQRNLSIKDMVDVPPLAMLNPDQQQVLEPAEK 2003
                    +S + S      + R   V +  N       +V P   ++  Q +VL     
Sbjct: 589  GNLEDSETDSLAESPQGGKGFSRRAPVRYHNNEHTPQ--NVRPGGSVSDQQTEVL----- 641

Query: 2004 STPKTQQYLNEQHINDHLHAENGNKTTSTGKKSYAPHVNQRLEETFKQNQYPSQEVKGSL 2183
                                 N N +T+  +  + P +NQ+L+  FK++ YPS+  K +L
Sbjct: 642  -------------------CSNSNGSTAKNRH-FGPAINQKLKAHFKEDPYPSRATKENL 681

Query: 2184 SKELGLTTTQIAKWFAKSRAKLRISAT 2264
            ++ELGLT  Q+ KWF+ +R   R++AT
Sbjct: 682  AQELGLTFNQVTKWFSSTRHYARVAAT 708


>gb|EAZ42623.1| hypothetical protein OsJ_27188 [Oryza sativa Japonica Group]
          Length = 634

 Score =  285 bits (729), Expect = 9e-74
 Identities = 154/309 (49%), Positives = 192/309 (62%), Gaps = 48/309 (15%)
 Frame = +3

Query: 477  SGAQNNVAKSNKKRKKASQTPWPSRYPLRSSVAGVRVLRSSSSAAKISNEQSI------- 635
            SG +N   ++ K+ +K SQ      YPLRSS + VRVLRS+S   K  NE  I       
Sbjct: 110  SGVRNRYKQTVKRGRKGSQISPSKTYPLRSSHSNVRVLRSAS---KKKNETPIVPTNDNT 166

Query: 636  ----------------PASNSIKNXXXXXXXXXXXSMLNN-------------------- 707
                            PA + +              +LN+                    
Sbjct: 167  AVQRVAKKRKRSKPLRPAPSRVLRSTSEKKNKAHNELLNDGAGVQPAEKKRKVGRPPKGG 226

Query: 708  ----EFALIRKRIRYLLNRINYEQSLIDAYSHEGWKGQNLEKIRPEKELERAKSEILRCK 875
                ++ +IRKR+RY+LNR+NYEQSLI AY+ EGWKGQ+LEKIRPEKELERAK EILRCK
Sbjct: 227  TPKDDYLMIRKRVRYVLNRMNYEQSLIQAYASEGWKGQSLEKIRPEKELERAKVEILRCK 286

Query: 876  LRIRESMCHLDSLLSEGRPDENMFDN-DEIDYENIICATCDSKDLSTDNDIILCDGSCER 1052
             RIRE+  +LDSLLSEG+ DE+MFD+  EI  E+I CA C SKD++  NDIILCDG C+R
Sbjct: 287  SRIREAFRNLDSLLSEGKLDESMFDSAGEISSEDIFCAACGSKDVTLKNDIILCDGICDR 346

Query: 1053 GFHQKCLSPPLQTHEIPPGDQGWLCPACDCKVDCFNLLNEFQGSTLTIEDTWEKVFPEAA 1232
            GFHQ CL+PPL   +IP GD+GWLCPACDCK+DC ++LNE QG  L+I D+WEKVFPEAA
Sbjct: 347  GFHQYCLNPPLLAEDIPQGDEGWLCPACDCKIDCIDVLNELQGVKLSIHDSWEKVFPEAA 406

Query: 1233 VIANGNNQL 1259
               NG+ Q+
Sbjct: 407  SFLNGSKQI 415


>dbj|BAJ99831.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1240

 Score =  282 bits (721), Expect = 8e-73
 Identities = 140/276 (50%), Positives = 194/276 (70%), Gaps = 14/276 (5%)
 Frame = +3

Query: 471  SASGAQNNVAKSNKKRKKASQTPWPSRYPLRSSVAGVRVLRSSSSAAKISNEQ------- 629
            S +G + N  ++  + +K S+      YPLRSS + VRVLRS S A K  ++        
Sbjct: 40   SVTGERKNFKRAANRGRKGSRVLSSRTYPLRSSESTVRVLRSRSVADKSPSDAVQIAERA 99

Query: 630  -SIPASNSIKNXXXXXXXXXXXSML-----NNEFALIRKRIRYLLNRINYEQSLIDAYSH 791
               P S+S+                     ++E + IRKRIRY+LNR+NY+QS ++AY++
Sbjct: 100  AEKPPSDSVDAVVKPPAKRIKRDRPAKGGPDDELSKIRKRIRYVLNRMNYQQSFLEAYAN 159

Query: 792  EGWKGQNLEKIRPEKELERAKSEILRCKLRIRESMCHLDSLLSEGRPDENMFDND-EIDY 968
            EGWK Q+LEKIRPEKELERAK+EI+RCKLRIRE+  +LD LL+ G+ +E++FD++ EI  
Sbjct: 160  EGWKNQSLEKIRPEKELERAKAEIMRCKLRIREAFQNLDHLLTLGKLEESLFDSEGEISS 219

Query: 969  ENIICATCDSKDLSTDNDIILCDGSCERGFHQKCLSPPLQTHEIPPGDQGWLCPACDCKV 1148
            ++I+CATC  +D++ +NDIILCDG+C+RGFHQ CL+PPL T +IP G++GWLCPACDCK+
Sbjct: 220  DDIVCATCSLQDVTLNNDIILCDGACDRGFHQNCLNPPLLTKDIPEGEEGWLCPACDCKI 279

Query: 1149 DCFNLLNEFQGSTLTIEDTWEKVFPEAAVIANGNNQ 1256
            DC  L+NE QG+ L I D+WEKVFPEAA +A+G+ Q
Sbjct: 280  DCIELINELQGTDLDINDSWEKVFPEAAAVAHGSMQ 315



 Score = 73.9 bits (180), Expect = 4e-10
 Identities = 43/114 (37%), Positives = 66/114 (57%)
 Frame = +3

Query: 1998 EKSTPKTQQYLNEQHINDHLHAENGNKTTSTGKKSYAPHVNQRLEETFKQNQYPSQEVKG 2177
            ++S       +N QH  + L   NG+ TT   K+ Y P +NQRL E F+ N YPS+ VK 
Sbjct: 1026 QRSQQSLHGSVNGQHAEELL-TPNGSSTTGQ-KRQYGPIINQRLHEQFETNPYPSRAVKE 1083

Query: 2178 SLSKELGLTTTQIAKWFAKSRAKLRISATGLKLSDTVYHAETKVQISEGNGLGK 2339
            SL++ELGLT  Q+ +WF   R +LR++++  K S +V +  +K  + E   + K
Sbjct: 1084 SLARELGLTFRQVERWFESKRRRLRVASS--KNSTSVENHSSKETMVENPNICK 1135