BLASTX nr result

ID: Zingiber25_contig00028587 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00028587
         (1325 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|WP_000044538.1| adhesin [Staphylococcus aureus] gi|387715218...    60   3e-06

>ref|WP_000044538.1| adhesin [Staphylococcus aureus] gi|387715218|gb|EIK03321.1|
            serine-rich adhesin for platelets [Staphylococcus aureus
            subsp. aureus VRS2]
          Length = 2137

 Score = 59.7 bits (143), Expect = 3e-06
 Identities = 75/403 (18%), Positives = 150/403 (37%), Gaps = 15/403 (3%)
 Frame = +1

Query: 4    NTSLSLNTSNDDPLQLTVAMFDDSDTIDDFLFPTETTTGRQLGKFRPKARAKTVKVVSAS 183
            + SLS + S  D   ++ +  + +           T+T          + + +     + 
Sbjct: 1464 SASLSGSESESDSQSISTSASESTSESASTSLSDSTSTSNSGSASTSTSLSNSASASESD 1523

Query: 184  TKTSDVAHGASASLEPVALDSHSEIETERPHLQPCTS---------SGSIMTCQNGSTTE 336
            + ++ ++   SAS++    DS S   +    L   TS         S S+ T ++GST+E
Sbjct: 1524 SSSTSLSDSTSASMQSSESDSQSTSASLSDSLSTSTSNRMSTIASLSTSVSTSESGSTSE 1583

Query: 337  TVPQPKVTQTESGASQGKHADNFQLNKENLCQLNKENLCQDENTSLSLNTSNDDPLQL-- 510
            +  +   T T    SQ            +      ++     +TS S+ TS  D   +  
Sbjct: 1584 STSESDSTSTSLSDSQSTSRSTSASGSASTSTSTSDSRSTSASTSTSMRTSTSDSQSMSL 1643

Query: 511  ---TEVMFNDLDSVDDFLCPMETTKGQQLGKFRPKVRAKTAKVVSASTKTSDDAQHVVSA 681
               T    +D  S+ D +   ++T G         +   T+   S S   S      +S 
Sbjct: 1644 STSTSTSMSDSTSLSDSVSDSKSTSGSTSTSTSGSLSTSTSLSGSESVSESTSLSDSISM 1703

Query: 682  PLESIAHDAHSELQTDTTCFQSCMSSCSTVS-GQHRSMPESVQQPEVMRTELVAPQDKHA 858
               +   D+ S   + +    + +S+  ++S  +  S  +S+   E   T +   Q    
Sbjct: 1704 SDSTSTSDSDSLSGSISLSGSTSLSTSDSLSDSKSLSSSQSMSGSESTSTSVSDSQSSST 1763

Query: 859  DNCQLNEANLYQDENTSLTLSASDDVPLKTVEVGKVSKFKPKVTKLPSKKATVKSVSFIL 1038
             N Q +          S+++SAS+   + T +   +S      T L +  +   SVS + 
Sbjct: 1764 SNSQFD----------SMSISASESDSMSTSDSSNISGSNSTSTSLSTSDSMSGSVS-VS 1812

Query: 1039 PDASCSAPVESISAMDTSSIQATIHSPADNPLHTSDTASDWNG 1167
               S S  +   +++  SS  +T  S +D+   +  T++  +G
Sbjct: 1813 TSTSLSDSISGSTSVSDSSSTSTSTSLSDSMSQSQSTSTSASG 1855


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