BLASTX nr result
ID: Zingiber25_contig00028558
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00028558
(1102 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002526336.1| tRNA-splicing endonuclease subunit Sen2-2, p... 251 4e-64
ref|XP_006488175.1| PREDICTED: tRNA-splicing endonuclease subuni... 237 7e-60
ref|XP_002284873.1| PREDICTED: tRNA-splicing endonuclease subuni... 237 7e-60
ref|XP_006424653.1| hypothetical protein CICLE_v10029956mg [Citr... 236 1e-59
ref|XP_006365743.1| PREDICTED: tRNA-splicing endonuclease subuni... 235 2e-59
ref|XP_006853554.1| hypothetical protein AMTR_s00032p00237240 [A... 235 3e-59
ref|XP_002313727.1| SPLICING ENDONUCLEASE 2 family protein [Popu... 234 4e-59
gb|ABK93461.1| unknown [Populus trichocarpa] 234 4e-59
ref|XP_004241267.1| PREDICTED: tRNA-splicing endonuclease subuni... 232 2e-58
dbj|BAA88627.1| tRNA intron endonuclease [Arabidopsis thaliana] ... 232 2e-58
ref|XP_006656141.1| PREDICTED: probable tRNA-splicing endonuclea... 228 3e-57
gb|EXB98580.1| tRNA-splicing endonuclease subunit Sen2-2 [Morus ... 227 6e-57
ref|XP_006365739.1| PREDICTED: tRNA-splicing endonuclease subuni... 227 6e-57
ref|NP_190145.1| tRNA-splicing endonuclease subunit Sen2-1 [Arab... 226 1e-56
gb|EMT08614.1| Putative tRNA-splicing endonuclease subunit Sen2 ... 226 2e-56
gb|EMS57725.1| putative tRNA-splicing endonuclease subunit Sen2 ... 226 2e-56
ref|XP_006281579.1| hypothetical protein CARUB_v10027691mg [Caps... 225 3e-56
dbj|BAK05284.1| predicted protein [Hordeum vulgare subsp. vulgare] 224 4e-56
gb|EMJ06985.1| hypothetical protein PRUPE_ppa010529mg [Prunus pe... 224 6e-56
gb|EOY33111.1| Splicing endonuclease 2, putative [Theobroma cacao] 223 1e-55
>ref|XP_002526336.1| tRNA-splicing endonuclease subunit Sen2-2, putative [Ricinus
communis] gi|223534295|gb|EEF36007.1| tRNA-splicing
endonuclease subunit Sen2-2, putative [Ricinus communis]
Length = 237
Score = 251 bits (641), Expect = 4e-64
Identities = 131/234 (55%), Positives = 166/234 (70%), Gaps = 1/234 (0%)
Frame = +3
Query: 264 GPRWKRKGFVDIARGNPMSKIVLQLQTSLKQSKINATLSGCIVFVTVEAEAGELLEQASF 443
G RWK KG A +PMSKI+ QL +SL Q + LSGC V + VE+E ELL +A F
Sbjct: 2 GTRWKGKGSEAKAAADPMSKIISQLCSSLIQFDAHGLLSGCSVLLAVESEQTELLTRACF 61
Query: 444 GK-IFTSQDDKQHFQFNLEESFYLYHALKCIKIVRDDEAPLEELELWKKITSERKGFPEL 620
G+ + TS+ DKQ FQ +EE+FYL ++LKCIKIV +D + +LELW+ + S++ FP+
Sbjct: 62 GRPMITSEKDKQWFQLGIEEAFYLSYSLKCIKIVSEDNCCISDLELWQFMKSQKPTFPDF 121
Query: 621 YKAYSHLRSKNWVVRSGTNYGVDFIAYRHHPALVHAEYAVLVIPEKDSNAKIDRLSSWPG 800
YKAYSHLR KNWVVR G+ YGVDF+AYRHHP+LVH+EYAVLV+ E+D+NA RL W
Sbjct: 122 YKAYSHLRMKNWVVRPGSQYGVDFVAYRHHPSLVHSEYAVLVLSEEDANAN-GRLRVWSD 180
Query: 801 LCCPLRLSGSVAKTLLVLYIMGCCNSNKSSMSCLEEFTVEERVIRRWVPEQSRE 962
C LRL GSVAKTLLVL I C+ + SCLE+++VEER RW P+QSRE
Sbjct: 181 FHCTLRLCGSVAKTLLVLGINKNCHGT-TLPSCLEKYSVEERTFARWSPQQSRE 233
>ref|XP_006488175.1| PREDICTED: tRNA-splicing endonuclease subunit Sen2-1-like isoform
X1 [Citrus sinensis]
Length = 301
Score = 237 bits (604), Expect = 7e-60
Identities = 125/240 (52%), Positives = 165/240 (68%), Gaps = 4/240 (1%)
Frame = +3
Query: 255 KLSGPRWKRKGFVDIARGNPMSKIVLQLQTSLKQSKINATLSGCIVFVTVEAEAGELLEQ 434
K GPRWK + A +PMSKI+ L +SL QS+ +A L+G + VEAE ELL +
Sbjct: 57 KSMGPRWKGRASEAKALADPMSKIISDLHSSLVQSEAHAVLAGYSALLAVEAEQTELLNR 116
Query: 435 ASFGK-IFTSQDDKQHFQFNLEESFYLYHALKCIKIVRDDEAPLEELELWKKITSERKGF 611
A FG+ I T++ DKQ +Q +EE FYL H+LKC+KIV +D + + ELW+ + ++++ F
Sbjct: 117 ACFGRPIVTAEKDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETF 176
Query: 612 PELYKAYSHLRSKNWVVRSGTNYGVDFIAYRHHPALVHAEYAVLVIPEKDSNAKIDRLSS 791
P LYKAYSHLR KNWVVRSG+ YGVDF+AYRHHP+LVH+EYAVLV+ E + + + RL
Sbjct: 177 PLLYKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGE-DGENGRLRV 235
Query: 792 WPGLCCPLRLSGSVAKTLLVLYIMGCCNSN---KSSMSCLEEFTVEERVIRRWVPEQSRE 962
W + C +RL G VAKTLL+L I N N ++ SCLE++ VEER I RW PEQ RE
Sbjct: 236 WSDIHCTVRLCGGVAKTLLILTI----NKNGQGTATPSCLEQYAVEERTISRWSPEQCRE 291
>ref|XP_002284873.1| PREDICTED: tRNA-splicing endonuclease subunit Sen2-1 [Vitis
vinifera]
Length = 242
Score = 237 bits (604), Expect = 7e-60
Identities = 126/237 (53%), Positives = 162/237 (68%), Gaps = 4/237 (1%)
Frame = +3
Query: 264 GPRWKRKGFVDIARGNPMSKIVLQLQTSLKQSKINATLSGCIVFVTVEAEAGELLEQASF 443
GPRWK KG A PMS+IV QLQ+SL +S LSGC V + AE ELL ++ F
Sbjct: 2 GPRWKGKGAEAKALAEPMSEIVSQLQSSLTRSDSQGLLSGCSVLLEAGAEQTELLNRSCF 61
Query: 444 GK-IFTSQDDKQHFQFNLEESFYLYHALKCIKIVRDDEAPLEELELWKKITSERKGFPEL 620
G+ + T++ DKQ FQ ++EE+FYL H+L C+KIV +D + ELW+ + S R+ FP+
Sbjct: 62 GRPVITAEKDKQWFQLSMEEAFYLCHSLGCLKIVGEDNHLKNDEELWQYMKSRRETFPDF 121
Query: 621 YKAYSHLRSKNWVVRSGTNYGVDFIAYRHHPALVHAEYAVLVIPEKDSNAKIDRLSSWPG 800
Y AYSHLR KNWVVRSG+ YGVDF+AYRHHPALVH+EYAVLV+ E++ NA RL W
Sbjct: 122 YMAYSHLRIKNWVVRSGSQYGVDFVAYRHHPALVHSEYAVLVLSEENENAN-GRLRVWSD 180
Query: 801 LCCPLRLSGSVAKTLLVLYIMGCCNSN---KSSMSCLEEFTVEERVIRRWVPEQSRE 962
C +RL GSVAKTLLV++I N N ++ CL++++VEER I RW EQ RE
Sbjct: 181 FDCTIRLCGSVAKTLLVIHI----NKNGHGATTPLCLKKYSVEERTITRWSAEQCRE 233
>ref|XP_006424653.1| hypothetical protein CICLE_v10029956mg [Citrus clementina]
gi|568869948|ref|XP_006488176.1| PREDICTED:
tRNA-splicing endonuclease subunit Sen2-1-like isoform
X2 [Citrus sinensis] gi|568869950|ref|XP_006488177.1|
PREDICTED: tRNA-splicing endonuclease subunit
Sen2-1-like isoform X3 [Citrus sinensis]
gi|557526587|gb|ESR37893.1| hypothetical protein
CICLE_v10029956mg [Citrus clementina]
Length = 243
Score = 236 bits (602), Expect = 1e-59
Identities = 124/237 (52%), Positives = 164/237 (69%), Gaps = 4/237 (1%)
Frame = +3
Query: 264 GPRWKRKGFVDIARGNPMSKIVLQLQTSLKQSKINATLSGCIVFVTVEAEAGELLEQASF 443
GPRWK + A +PMSKI+ L +SL QS+ +A L+G + VEAE ELL +A F
Sbjct: 2 GPRWKGRASEAKALADPMSKIISDLHSSLVQSEAHAVLAGYSALLAVEAEQTELLNRACF 61
Query: 444 GK-IFTSQDDKQHFQFNLEESFYLYHALKCIKIVRDDEAPLEELELWKKITSERKGFPEL 620
G+ I T++ DKQ +Q +EE FYL H+LKC+KIV +D + + ELW+ + ++++ FP L
Sbjct: 62 GRPIVTAEKDKQWYQLGMEEGFYLCHSLKCLKIVGEDNSTKNDDELWQYMKAKKETFPLL 121
Query: 621 YKAYSHLRSKNWVVRSGTNYGVDFIAYRHHPALVHAEYAVLVIPEKDSNAKIDRLSSWPG 800
YKAYSHLR KNWVVRSG+ YGVDF+AYRHHP+LVH+EYAVLV+ E + + + RL W
Sbjct: 122 YKAYSHLRKKNWVVRSGSQYGVDFVAYRHHPSLVHSEYAVLVLAEGE-DGENGRLRVWSD 180
Query: 801 LCCPLRLSGSVAKTLLVLYIMGCCNSN---KSSMSCLEEFTVEERVIRRWVPEQSRE 962
+ C +RL G VAKTLL+L I N N ++ SCLE++ VEER I RW PEQ RE
Sbjct: 181 IHCTVRLCGGVAKTLLILTI----NKNGQGTATPSCLEQYAVEERTISRWSPEQCRE 233
>ref|XP_006365743.1| PREDICTED: tRNA-splicing endonuclease subunit Sen2-1-like [Solanum
tuberosum]
Length = 243
Score = 235 bits (600), Expect = 2e-59
Identities = 129/234 (55%), Positives = 160/234 (68%), Gaps = 1/234 (0%)
Frame = +3
Query: 264 GPRWKRKGFVDIARGNPMSKIVLQLQTSLKQSKINATLSGCIVFVTVEAEAGELLEQASF 443
G RWK KG A +P+S+IV QLQ+SL S LSG V + +AE +LL +A F
Sbjct: 2 GSRWKGKGAEVKALADPISEIVSQLQSSLISSNSKGLLSGTGVLLKADAELTDLLNRACF 61
Query: 444 GKI-FTSQDDKQHFQFNLEESFYLYHALKCIKIVRDDEAPLEELELWKKITSERKGFPEL 620
G+ TS+ ++Q FQ + EE+FYL H+LKCIKIV ++ L +LWK +TS R+ FP L
Sbjct: 62 GRPRVTSEKNEQWFQLSTEEAFYLQHSLKCIKIVDHNDTELNGDKLWKHMTSSRENFPIL 121
Query: 621 YKAYSHLRSKNWVVRSGTNYGVDFIAYRHHPALVHAEYAVLVIPEKDSNAKIDRLSSWPG 800
+KA+SHLRSKNWVVRSG+ YGVDF+AYRHHPALVH+EYAVLV+ +D NA RL W
Sbjct: 122 FKAFSHLRSKNWVVRSGSQYGVDFVAYRHHPALVHSEYAVLVLSAQDGNAH-GRLKVWSD 180
Query: 801 LCCPLRLSGSVAKTLLVLYIMGCCNSNKSSMSCLEEFTVEERVIRRWVPEQSRE 962
C LRL GSVAKTLL+L I S +S SCL+ + VEER I RW PEQ RE
Sbjct: 181 FHCTLRLCGSVAKTLLILDIEE-QQSCATSPSCLDNYVVEERTITRWSPEQGRE 233
>ref|XP_006853554.1| hypothetical protein AMTR_s00032p00237240 [Amborella trichopoda]
gi|548857207|gb|ERN15021.1| hypothetical protein
AMTR_s00032p00237240 [Amborella trichopoda]
Length = 243
Score = 235 bits (599), Expect = 3e-59
Identities = 125/233 (53%), Positives = 157/233 (67%), Gaps = 1/233 (0%)
Frame = +3
Query: 267 PRWKRKGFVDIARGNPMSKIVLQLQTSLKQSKINATLSGCIVFVTVEAEAGELLEQASFG 446
PRWK KG +A NPMSKI+ QLQ+SL S+ +A L+G V + V +E +LL A FG
Sbjct: 3 PRWKGKGSAGVASSNPMSKIITQLQSSLLLSRPHALLNGSSVLLEVGSEQTDLLNHACFG 62
Query: 447 K-IFTSQDDKQHFQFNLEESFYLYHALKCIKIVRDDEAPLEELELWKKITSERKGFPELY 623
+ + T+ DKQ FQ EE+FYL H+LKC+ + + E ELWK + S++K FP LY
Sbjct: 63 RPVITTLKDKQWFQLGFEEAFYLIHSLKCLSVPCGSVSLTSE-ELWKYMISKKKLFPRLY 121
Query: 624 KAYSHLRSKNWVVRSGTNYGVDFIAYRHHPALVHAEYAVLVIPEKDSNAKIDRLSSWPGL 803
KAYSHLRSKNWVVR G+ YG DF+AYRHHPALVH+EYAVLV+ EKD + RL W
Sbjct: 122 KAYSHLRSKNWVVRQGSQYGTDFVAYRHHPALVHSEYAVLVLSEKDQDQGPSRLRVWSDW 181
Query: 804 CCPLRLSGSVAKTLLVLYIMGCCNSNKSSMSCLEEFTVEERVIRRWVPEQSRE 962
+R+ GS+AKTLLVL + +++SS SCLE F V E I RWVPEQ RE
Sbjct: 182 HSIVRVCGSIAKTLLVLDV-DISGADESSPSCLERFCVSEYKIARWVPEQHRE 233
>ref|XP_002313727.1| SPLICING ENDONUCLEASE 2 family protein [Populus trichocarpa]
gi|222850135|gb|EEE87682.1| SPLICING ENDONUCLEASE 2
family protein [Populus trichocarpa]
Length = 235
Score = 234 bits (598), Expect = 4e-59
Identities = 124/234 (52%), Positives = 159/234 (67%), Gaps = 1/234 (0%)
Frame = +3
Query: 264 GPRWKRKGFVDIARGNPMSKIVLQLQTSLKQSKINATLSGCIVFVTVEAEAGELLEQASF 443
GPRWK KG A +PMS+IV QLQ+SL QS A+LSGC V + VE E ELL +A F
Sbjct: 2 GPRWKGKGAEAKALADPMSEIVSQLQSSLLQSNACASLSGCSVLLAVETEQTELLTRACF 61
Query: 444 GK-IFTSQDDKQHFQFNLEESFYLYHALKCIKIVRDDEAPLEELELWKKITSERKGFPEL 620
GK I T++ +KQ FQ LEE+FYL ++LKC+KI +D +L+LW + +++ FP+
Sbjct: 62 GKPIITAEKEKQWFQLGLEEAFYLCYSLKCLKIAGEDNFVKNDLDLWLYMKLKKEKFPDF 121
Query: 621 YKAYSHLRSKNWVVRSGTNYGVDFIAYRHHPALVHAEYAVLVIPEKDSNAKIDRLSSWPG 800
YKAYSHLR KNWV+R G YGVDF+AY+HHP+LVH+EYAV+V+ E D+ RL W
Sbjct: 122 YKAYSHLRMKNWVLRPGLQYGVDFVAYQHHPSLVHSEYAVIVLSEGDTG----RLRVWSD 177
Query: 801 LCCPLRLSGSVAKTLLVLYIMGCCNSNKSSMSCLEEFTVEERVIRRWVPEQSRE 962
C +RL GSVAKTLL+L + S SCLE ++VEE I RW PEQSR+
Sbjct: 178 FHCTIRLCGSVAKTLLILNV-DKNGHGAISPSCLERYSVEECTITRWSPEQSRD 230
>gb|ABK93461.1| unknown [Populus trichocarpa]
Length = 235
Score = 234 bits (598), Expect = 4e-59
Identities = 124/234 (52%), Positives = 159/234 (67%), Gaps = 1/234 (0%)
Frame = +3
Query: 264 GPRWKRKGFVDIARGNPMSKIVLQLQTSLKQSKINATLSGCIVFVTVEAEAGELLEQASF 443
GPRWK KG A +PMS+IV QLQ+SL QS A+LSGC V + VE E ELL +A F
Sbjct: 2 GPRWKGKGAEAKALADPMSEIVSQLQSSLLQSNACASLSGCSVLLAVETEKTELLTRACF 61
Query: 444 GK-IFTSQDDKQHFQFNLEESFYLYHALKCIKIVRDDEAPLEELELWKKITSERKGFPEL 620
GK I T++ +KQ FQ LEE+FYL ++LKC+KI +D +L+LW + +++ FP+
Sbjct: 62 GKPIITAEKEKQWFQLGLEEAFYLCYSLKCLKIAGEDNFVKNDLDLWLYMKLKKEKFPDF 121
Query: 621 YKAYSHLRSKNWVVRSGTNYGVDFIAYRHHPALVHAEYAVLVIPEKDSNAKIDRLSSWPG 800
YKAYSHLR KNWV+R G YGVDF+AY+HHP+LVH+EYAV+V+ E D+ RL W
Sbjct: 122 YKAYSHLRMKNWVLRPGLQYGVDFVAYQHHPSLVHSEYAVIVLSEGDTG----RLRVWSD 177
Query: 801 LCCPLRLSGSVAKTLLVLYIMGCCNSNKSSMSCLEEFTVEERVIRRWVPEQSRE 962
C +RL GSVAKTLL+L + S SCLE ++VEE I RW PEQSR+
Sbjct: 178 FHCTIRLCGSVAKTLLILNV-DKNGHGAISPSCLERYSVEECTITRWSPEQSRD 230
>ref|XP_004241267.1| PREDICTED: tRNA-splicing endonuclease subunit Sen2-1-like [Solanum
lycopersicum]
Length = 243
Score = 232 bits (592), Expect = 2e-58
Identities = 126/234 (53%), Positives = 158/234 (67%), Gaps = 1/234 (0%)
Frame = +3
Query: 264 GPRWKRKGFVDIARGNPMSKIVLQLQTSLKQSKINATLSGCIVFVTVEAEAGELLEQASF 443
G RWK KG A +P+S+I+ QLQ+SL S LSG V + +AE +LL +A F
Sbjct: 2 GSRWKGKGAEVKALADPISEIISQLQSSLISSNSKGLLSGTGVLLKADAELTDLLNRACF 61
Query: 444 GKI-FTSQDDKQHFQFNLEESFYLYHALKCIKIVRDDEAPLEELELWKKITSERKGFPEL 620
G+ TS+ ++Q FQ + EE+FYL ++L CIKIV D+ L ELWK + S R+ FP L
Sbjct: 62 GRPRVTSEKNEQWFQLSTEEAFYLQYSLNCIKIVDHDDTELNSDELWKHMISRRENFPIL 121
Query: 621 YKAYSHLRSKNWVVRSGTNYGVDFIAYRHHPALVHAEYAVLVIPEKDSNAKIDRLSSWPG 800
+KA+SHLRSKNWVVRSG+ YGVDF+AYRHHPALVH++YAVLV+ +D NA RL W
Sbjct: 122 FKAFSHLRSKNWVVRSGSQYGVDFVAYRHHPALVHSQYAVLVLSAQDGNAN-GRLKVWSD 180
Query: 801 LCCPLRLSGSVAKTLLVLYIMGCCNSNKSSMSCLEEFTVEERVIRRWVPEQSRE 962
C LRL GSVAKTLL+L I S +S SCL+ + VEER I RW PEQ RE
Sbjct: 181 FHCTLRLCGSVAKTLLILNIEE-QQSCATSPSCLDNYVVEERTITRWSPEQGRE 233
>dbj|BAA88627.1| tRNA intron endonuclease [Arabidopsis thaliana]
gi|6635258|dbj|BAA88628.1| tRNA intron endonuclease
[Arabidopsis thaliana]
Length = 237
Score = 232 bits (591), Expect = 2e-58
Identities = 120/234 (51%), Positives = 162/234 (69%), Gaps = 2/234 (0%)
Frame = +3
Query: 267 PRWKRKGFVDIARGNPMSKIVLQLQTSLKQSKINATLSGCIVFVTVEAEAGELLEQASFG 446
PRWK KG A P+SK VL+LQ+SL Q++ LS C V ++VE+E ELL++ FG
Sbjct: 3 PRWKWKGAEAKALAEPVSKTVLELQSSLTQTEALGFLSSCNVLLSVESEQAELLDRCCFG 62
Query: 447 KIFTSQD-DKQHFQFNLEESFYLYHALKCIKIVRDDEAPLEELELWKKITSERKGFPELY 623
++ S + DK+ Q + EE+F+L++ LKCIKI + E++LW+ ++S ++ F LY
Sbjct: 63 RLVVSAEKDKRWIQLSFEEAFFLFYKLKCIKICLHGRSLENEVDLWRSMSSFKQDFAILY 122
Query: 624 KAYSHLRSKNWVVRSGTNYGVDFIAYRHHPALVHAEYAVLVIPEKDSNAKIDRLSSWPGL 803
KAYSHLRSKNW+VRSG YGVDF+ YRHHP+LVH+EYAVLV S + DRL W +
Sbjct: 123 KAYSHLRSKNWIVRSGLQYGVDFVVYRHHPSLVHSEYAVLV----QSISGNDRLKVWSDI 178
Query: 804 CCPLRLSGSVAKTLLVLYIMGCCNSNKSSMS-CLEEFTVEERVIRRWVPEQSRE 962
C +RL+GSVAKTLLVLY+ G + ++ CL+E+TVEE+ IRRW PE SRE
Sbjct: 179 HCSVRLTGSVAKTLLVLYVNGQVKTENMNLPLCLDEYTVEEQTIRRWSPELSRE 232
>ref|XP_006656141.1| PREDICTED: probable tRNA-splicing endonuclease subunit Sen2-like
isoform X1 [Oryza brachyantha]
gi|573947645|ref|XP_006656142.1| PREDICTED: probable
tRNA-splicing endonuclease subunit Sen2-like isoform X2
[Oryza brachyantha]
Length = 307
Score = 228 bits (581), Expect = 3e-57
Identities = 122/245 (49%), Positives = 154/245 (62%), Gaps = 8/245 (3%)
Frame = +3
Query: 252 MKLSGPRWKR----KGFVDIARGNPMSKIVLQLQTSLKQSKINATLSGC--IVFVTVEAE 413
M GPRWK+ K F +A NPMS IV +L+ S SK A LSG + VE E
Sbjct: 3 MDFPGPRWKKGKESKDFASLAAANPMSTIVSELKASFISSKPVAILSGPDGSSILGVEPE 62
Query: 414 AGELLEQASFGK-IFTSQDDKQHFQFNLEESFYLYHALKCIKIVRDDEAPLEELELWKKI 590
++ +A+FG I ++ K FQ + EE FYLYH+L CI++ D+ + E+ELW
Sbjct: 63 QAMIINRAAFGHAIENTEAQKSWFQLSPEEVFYLYHSLNCIRVESQDKMQMSEVELWDHF 122
Query: 591 TSERKGFPELYKAYSHLRSKNWVVRSGTNYGVDFIAYRHHPALVHAEYAVLVIPE-KDSN 767
S + FPE+YKAYSHLRSKNWVVRSG YG DF+AYRHHPALVH+E+ V+V+PE +
Sbjct: 123 RSGSESFPEMYKAYSHLRSKNWVVRSGLQYGADFVAYRHHPALVHSEFTVVVLPEGAEFG 182
Query: 768 AKIDRLSSWPGLCCPLRLSGSVAKTLLVLYIMGCCNSNKSSMSCLEEFTVEERVIRRWVP 947
++ RL W L C LR SGSVAKTLLVL I + SS CLE+ V ER I RW+P
Sbjct: 183 SRCGRLQVWSDLLCALRASGSVAKTLLVLTISSSSSCELSSPECLEQLLVHERTITRWIP 242
Query: 948 EQSRE 962
+Q RE
Sbjct: 243 QQCRE 247
>gb|EXB98580.1| tRNA-splicing endonuclease subunit Sen2-2 [Morus notabilis]
Length = 251
Score = 227 bits (579), Expect = 6e-57
Identities = 123/237 (51%), Positives = 155/237 (65%), Gaps = 4/237 (1%)
Frame = +3
Query: 264 GPRWKRKGFVDIARGNPMSKIVLQLQTSLKQSKINATLSGCIVFVTVEAEAGELLEQASF 443
GPRWK KG A G+PMSKIV QLQ+SL QS A LSG + + ++ +LL +A F
Sbjct: 2 GPRWKGKGSAAKALGDPMSKIVSQLQSSLIQSDAKALLSGSNMLLVTDSLQADLLNRACF 61
Query: 444 GKIFTSQDD-KQHFQFNLEESFYLYHALKCIKIVRDDEAPLEELELWKKITSERKGFPEL 620
G TS + KQ FQ +EE+FYL H+LKC+KI+ DE + + +LW+ + S++ FP+
Sbjct: 62 GVPITSSEKYKQWFQLGMEEAFYLSHSLKCLKILNKDECLMNDQQLWQHMKSKKPTFPDF 121
Query: 621 YKAYSHLRSKNWVVRSGTNYGVDFIAYRHHPALVHAEYAVLVIPEKDSNAKIDRLSSWPG 800
YKAYSHLR+KNWVV SG YGVDF+AYRHHPALVH+E+AVLV E D A +RL W
Sbjct: 122 YKAYSHLRAKNWVVMSGVRYGVDFVAYRHHPALVHSEFAVLVFSEGDGVAN-ERLRVWSD 180
Query: 801 LCCPLRLSGSVAKTLLVLYIMGCCNSN---KSSMSCLEEFTVEERVIRRWVPEQSRE 962
+ C RL V KTLLVL I N N S SC+EE+ V E I RW+PE+ RE
Sbjct: 181 IHCTTRLCSGVVKTLLVLEI----NKNGHDVDSPSCVEEYNVIEYTITRWLPERCRE 233
>ref|XP_006365739.1| PREDICTED: tRNA-splicing endonuclease subunit Sen2-1-like [Solanum
tuberosum]
Length = 242
Score = 227 bits (579), Expect = 6e-57
Identities = 122/234 (52%), Positives = 158/234 (67%), Gaps = 1/234 (0%)
Frame = +3
Query: 264 GPRWKRKGFVDIARGNPMSKIVLQLQTSLKQSKINATLSGCIVFVTVEAEAGELLEQASF 443
G RWK +G A +P+S+IV QLQ L S LSG V + +AE +LL +A F
Sbjct: 2 GSRWKGQGAQVKALADPISEIVSQLQYFLISSNSIGLLSGMSVLLKADAELTDLLNRACF 61
Query: 444 GKI-FTSQDDKQHFQFNLEESFYLYHALKCIKIVRDDEAPLEELELWKKITSERKGFPEL 620
G+ TS+ ++Q FQ ++EE+FYL ++LKCIK+V ++ L ELWK +TS+++ FP L
Sbjct: 62 GRPRVTSEKNEQWFQLSMEEAFYLQYSLKCIKVVDHNDTELNNDELWKHMTSKKETFPIL 121
Query: 621 YKAYSHLRSKNWVVRSGTNYGVDFIAYRHHPALVHAEYAVLVIPEKDSNAKIDRLSSWPG 800
+K +SHLRSKNWV RSG+ YGVDF+AYRHHPALVH+EYAVLV+ +D +A RL W
Sbjct: 122 FKVFSHLRSKNWVTRSGSQYGVDFVAYRHHPALVHSEYAVLVLSAQDGSAN-GRLRVWSD 180
Query: 801 LCCPLRLSGSVAKTLLVLYIMGCCNSNKSSMSCLEEFTVEERVIRRWVPEQSRE 962
C LRL GSVAKTLL+L I S +S SCL+ + VEER I RW PEQ RE
Sbjct: 181 FHCTLRLCGSVAKTLLILDIEQQQQSCAASPSCLDNYIVEERTITRWSPEQGRE 234
>ref|NP_190145.1| tRNA-splicing endonuclease subunit Sen2-1 [Arabidopsis thaliana]
gi|145332759|ref|NP_001078245.1| tRNA-splicing
endonuclease subunit Sen2-1 [Arabidopsis thaliana]
gi|75181816|sp|Q9M1E8.1|SEN21_ARATH RecName:
Full=tRNA-splicing endonuclease subunit Sen2-1; AltName:
Full=tRNA-intron endonuclease Sen2-1; Short=AtSen1
gi|6996262|emb|CAB75488.1| putative protein [Arabidopsis
thaliana] gi|62320332|dbj|BAD94688.1| putative protein
[Arabidopsis thaliana] gi|88196761|gb|ABD43023.1|
At3g45590 [Arabidopsis thaliana]
gi|332644526|gb|AEE78047.1| tRNA-splicing endonuclease
subunit Sen2-1 [Arabidopsis thaliana]
gi|332644527|gb|AEE78048.1| tRNA-splicing endonuclease
subunit Sen2-1 [Arabidopsis thaliana]
Length = 237
Score = 226 bits (576), Expect = 1e-56
Identities = 117/234 (50%), Positives = 161/234 (68%), Gaps = 2/234 (0%)
Frame = +3
Query: 267 PRWKRKGFVDIARGNPMSKIVLQLQTSLKQSKINATLSGCIVFVTVEAEAGELLEQASFG 446
PRWK KG A P+SK V +L++SL Q++ LS C V ++VE+E ELL++ FG
Sbjct: 3 PRWKWKGAEAKALAEPVSKTVSELRSSLTQTEALGFLSSCNVLLSVESEEAELLDRCCFG 62
Query: 447 KIFT-SQDDKQHFQFNLEESFYLYHALKCIKIVRDDEAPLEELELWKKITSERKGFPELY 623
++ ++ DK+ Q + EE+F+L++ LKCIKI + E++LW+ ++S ++ F LY
Sbjct: 63 RLVVGAEKDKRWIQLSFEEAFFLFYKLKCIKICLHGRSLENEVDLWRSMSSFKQDFAILY 122
Query: 624 KAYSHLRSKNWVVRSGTNYGVDFIAYRHHPALVHAEYAVLVIPEKDSNAKIDRLSSWPGL 803
KAYSHLRSKNW+VRSG YGVDF+ YRHHP+LVH+EYAVLV S DRL W +
Sbjct: 123 KAYSHLRSKNWIVRSGLQYGVDFVVYRHHPSLVHSEYAVLV----QSIGGNDRLKVWSDI 178
Query: 804 CCPLRLSGSVAKTLLVLYIMGCCNSNKSSMS-CLEEFTVEERVIRRWVPEQSRE 962
C +RL+GSVAK+LLVLY+ N+ K ++ CLE++TVEE+ IRRW PE SRE
Sbjct: 179 HCSVRLTGSVAKSLLVLYVNRKVNTEKMNLPLCLEDYTVEEQTIRRWSPELSRE 232
>gb|EMT08614.1| Putative tRNA-splicing endonuclease subunit Sen2 [Aegilops
tauschii]
Length = 313
Score = 226 bits (575), Expect = 2e-56
Identities = 126/246 (51%), Positives = 157/246 (63%), Gaps = 8/246 (3%)
Frame = +3
Query: 249 MMKLSGPRWKR----KGFVDIARGNPMSKIVLQLQTSLKQSKINATLS--GCIVFVTVEA 410
+M +GPRWK+ K F +A +PMS IV +LQ+SLK SK+ ATLS G + V
Sbjct: 24 LMDKAGPRWKKGKDGKDFAALAAAHPMSSIVAELQSSLKGSKLVATLSNQGRDATLGVNL 83
Query: 411 EAGELLEQASFGKIFTSQD-DKQHFQFNLEESFYLYHALKCIKIVRDDEAPLEELELWKK 587
+ LL +A+FG+ + + KQ FQ EE FYLYH LKCI V + + L E ELW
Sbjct: 84 QQATLLNRAAFGRALDNAEAGKQWFQLGAEEVFYLYHGLKCIS-VSESKKLLSEGELWDH 142
Query: 588 ITSERKGFPELYKAYSHLRSKNWVVRSGTNYGVDFIAYRHHPALVHAEYAVLVIPE-KDS 764
+ S + FPE+YKAYSHLRSKNWVVRSG YG DF+AYRHHPALVH+E+AV+V+PE +
Sbjct: 143 LCSASESFPEMYKAYSHLRSKNWVVRSGLQYGADFVAYRHHPALVHSEFAVVVVPEGVEF 202
Query: 765 NAKIDRLSSWPGLCCPLRLSGSVAKTLLVLYIMGCCNSNKSSMSCLEEFTVEERVIRRWV 944
+ RL W L C LR SGSVAKTLLVL + SS CLE+ V ER I RW+
Sbjct: 203 GGRCGRLKVWSDLLCALRASGSVAKTLLVLTVSSSI-CELSSPDCLEQLVVHERTITRWI 261
Query: 945 PEQSRE 962
+Q RE
Sbjct: 262 AQQCRE 267
>gb|EMS57725.1| putative tRNA-splicing endonuclease subunit Sen2 [Triticum urartu]
Length = 288
Score = 226 bits (575), Expect = 2e-56
Identities = 125/243 (51%), Positives = 157/243 (64%), Gaps = 8/243 (3%)
Frame = +3
Query: 258 LSGPRWKR----KGFVDIARGNPMSKIVLQLQTSLKQSKINATLS--GCIVFVTVEAEAG 419
++GPRWK+ K F +A +PMS IV +LQ+SLK SK+ ATLS G + V +
Sbjct: 1 MAGPRWKKGKDGKDFAALAAAHPMSSIVAELQSSLKGSKLVATLSCRGRDATLGVNLQQA 60
Query: 420 ELLEQASFGKIFTSQD-DKQHFQFNLEESFYLYHALKCIKIVRDDEAPLEELELWKKITS 596
LL +A+FG+ + + +KQ Q EE FYLYH LKCI V + + L E ELW + S
Sbjct: 61 ALLNRAAFGRALDNAEAEKQWIQLGAEEVFYLYHGLKCIS-VSESKKLLSEGELWDHLCS 119
Query: 597 ERKGFPELYKAYSHLRSKNWVVRSGTNYGVDFIAYRHHPALVHAEYAVLVIPE-KDSNAK 773
+ FPE+YKAYSHLRSKNWVVRSG YG DF+AYRHHPALVH+E+AV+V+PE + +
Sbjct: 120 ASESFPEMYKAYSHLRSKNWVVRSGLQYGADFVAYRHHPALVHSEFAVVVVPEGAEFGGR 179
Query: 774 IDRLSSWPGLCCPLRLSGSVAKTLLVLYIMGCCNSNKSSMSCLEEFTVEERVIRRWVPEQ 953
RL+ W L C LR SGSVAK LLVL I N SS CLE+ V ER I RW+ +Q
Sbjct: 180 CGRLNVWSDLLCALRASGSVAKALLVLTI-SSSNCGLSSPDCLEQLVVHERTITRWIAQQ 238
Query: 954 SRE 962
RE
Sbjct: 239 CRE 241
>ref|XP_006281579.1| hypothetical protein CARUB_v10027691mg [Capsella rubella]
gi|482550283|gb|EOA14477.1| hypothetical protein
CARUB_v10027691mg [Capsella rubella]
Length = 255
Score = 225 bits (573), Expect = 3e-56
Identities = 117/234 (50%), Positives = 153/234 (65%), Gaps = 2/234 (0%)
Frame = +3
Query: 267 PRWKRKGFVDIARGNPMSKIVLQLQTSLKQSKINATLSGCIVFVTVEAEAGELLEQASFG 446
PRWK KG A P+S VL+LQ SL +++ + TLS C V + VE E ELL++ FG
Sbjct: 8 PRWKWKGAEAKALAEPISNSVLELQLSLAKTESSGTLSSCNVLLAVEPEQAELLDRCCFG 67
Query: 447 KIFTSQDD-KQHFQFNLEESFYLYHALKCIKIVRDDEAPLEELELWKKITSERKGFPELY 623
++ S + K+ Q + EE+F+L+H LKCIKI E++ W + S+R FP Y
Sbjct: 68 RLVLSAEKVKKWIQLSFEEAFFLFHTLKCIKISLQGRCLENEVDTWMYMKSKRPNFPMFY 127
Query: 624 KAYSHLRSKNWVVRSGTNYGVDFIAYRHHPALVHAEYAVLVIPEKDSNAKIDRLSSWPGL 803
KAYSHLRSKNWV+RSG YGVDF+AYRHHP+LVH+EY+VLV + DRL W +
Sbjct: 128 KAYSHLRSKNWVLRSGLQYGVDFVAYRHHPSLVHSEYSVLV-----QSGDSDRLRVWSDI 182
Query: 804 CCPLRLSGSVAKTLLVLYIMGCCNSNKSSM-SCLEEFTVEERVIRRWVPEQSRE 962
C +RLSGSVAKTLL LY+ G ++ +CLE+FTVEE+ + RW PE SRE
Sbjct: 183 HCAVRLSGSVAKTLLTLYVNGNFKGEGLNLPACLEDFTVEEQTVSRWSPELSRE 236
>dbj|BAK05284.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 292
Score = 224 bits (572), Expect = 4e-56
Identities = 124/245 (50%), Positives = 156/245 (63%), Gaps = 8/245 (3%)
Frame = +3
Query: 252 MKLSGPRWKR----KGFVDIARGNPMSKIVLQLQTSLKQSKINATLS--GCIVFVTVEAE 413
M +SGPRWK+ K F +A PMS IV +LQ+SLK + + ATLS G + V +
Sbjct: 1 MDMSGPRWKKGKDGKNFSALAAAQPMSGIVAKLQSSLKGATLVATLSSQGRDAILGVNPQ 60
Query: 414 AGELLEQASFGKIFTSQD-DKQHFQFNLEESFYLYHALKCIKIVRDDEAPLEELELWKKI 590
LL +A+FG+ + +KQ FQ EE FYL HALKCI + + + + ELW +
Sbjct: 61 QATLLNRAAFGRALDNAGAEKQWFQLGAEEVFYLCHALKCISVESASKELMSQGELWDHL 120
Query: 591 TSERKGFPELYKAYSHLRSKNWVVRSGTNYGVDFIAYRHHPALVHAEYAVLVIPE-KDSN 767
S + FPE+YKAYSHLRSKNWVVRSG YG DF+AYRHHPALVH+E+AV+V+PE +
Sbjct: 121 CSASESFPEMYKAYSHLRSKNWVVRSGLQYGTDFVAYRHHPALVHSEFAVVVVPEGVEFG 180
Query: 768 AKIDRLSSWPGLCCPLRLSGSVAKTLLVLYIMGCCNSNKSSMSCLEEFTVEERVIRRWVP 947
+ RL+ W L C LR SGSVAKTLLVL I N SS CLE+ V ER I RW+
Sbjct: 181 GRCGRLNVWSDLLCALRASGSVAKTLLVLTI-SSSNCELSSPDCLEQLVVHERTISRWIA 239
Query: 948 EQSRE 962
+Q RE
Sbjct: 240 QQCRE 244
>gb|EMJ06985.1| hypothetical protein PRUPE_ppa010529mg [Prunus persica]
Length = 246
Score = 224 bits (570), Expect = 6e-56
Identities = 119/232 (51%), Positives = 153/232 (65%), Gaps = 1/232 (0%)
Frame = +3
Query: 270 RWKRKGFVDIARGNPMSKIVLQLQTSLKQSKINATLSGCIVFVTVEAEAGELLEQASFG- 446
+WK KG A +PMSKIVLQLQ+SL QS L GC V + E E LL +A FG
Sbjct: 4 KWKAKGAEAKALADPMSKIVLQLQSSLIQSDARGILCGCSVLLAAEEEQAHLLGRAYFGD 63
Query: 447 KIFTSQDDKQHFQFNLEESFYLYHALKCIKIVRDDEAPLEELELWKKITSERKGFPELYK 626
++ ++ DK+ FQ ++EE+F+L ++LKC+KIV +D+ P + ELW+ + S++ FP+ YK
Sbjct: 64 RVINAEKDKRWFQLDMEEAFFLCYSLKCLKIVGEDKRPKDVQELWQYMKSKKAAFPDFYK 123
Query: 627 AYSHLRSKNWVVRSGTNYGVDFIAYRHHPALVHAEYAVLVIPEKDSNAKIDRLSSWPGLC 806
AYSHLR KNWVVR G YG DF+AYRHHP LVH++YAVLV E D A RL W +
Sbjct: 124 AYSHLRLKNWVVRPGFKYGADFVAYRHHPNLVHSDYAVLVSSEGDGEAN-GRLRVWSDIH 182
Query: 807 CPLRLSGSVAKTLLVLYIMGCCNSNKSSMSCLEEFTVEERVIRRWVPEQSRE 962
LRL V KTLLVL I + +S SCLE +TV+ER + RWVPEQ RE
Sbjct: 183 GTLRLCLGVVKTLLVLSI-SKNGHDAASPSCLENYTVDERTVSRWVPEQGRE 233
>gb|EOY33111.1| Splicing endonuclease 2, putative [Theobroma cacao]
Length = 240
Score = 223 bits (567), Expect = 1e-55
Identities = 119/232 (51%), Positives = 154/232 (66%), Gaps = 1/232 (0%)
Frame = +3
Query: 270 RWKRKGFVDIARGNPMSKIVLQLQTSLKQSKINATLSGCIVFVTVEAEAGELLEQASFGK 449
RWK KG A +PMSKIV QLQ+SL S + LS C V V V+A+ +LL +A FG+
Sbjct: 4 RWKGKGSEAKAIADPMSKIVSQLQSSLIHSNTHGLLSSCSVLVEVDAQLADLLNRACFGR 63
Query: 450 I-FTSQDDKQHFQFNLEESFYLYHALKCIKIVRDDEAPLEELELWKKITSERKGFPELYK 626
T++ D + FQ ++EE+FYL +LKC+K+V +D ELW+ + S++ FP Y
Sbjct: 64 PRITAEKDNEWFQLDMEEAFYLCFSLKCLKVVGEDGCIKSNEELWEYMKSKKAVFPVFYM 123
Query: 627 AYSHLRSKNWVVRSGTNYGVDFIAYRHHPALVHAEYAVLVIPEKDSNAKIDRLSSWPGLC 806
AYSHLR KNWVVR G YGVDF+AYRHHPALVH+EYAVLV+ E D++ RL W +
Sbjct: 124 AYSHLRHKNWVVRPGLQYGVDFVAYRHHPALVHSEYAVLVLSEGDNDLN-GRLRVWSAIH 182
Query: 807 CPLRLSGSVAKTLLVLYIMGCCNSNKSSMSCLEEFTVEERVIRRWVPEQSRE 962
+RL GSVAKTLL++ + C+ S SCLE +TVEE+ I RW PEQ RE
Sbjct: 183 GTVRLCGSVAKTLLIVNVNNNCH-GAISPSCLEHYTVEEQTITRWNPEQCRE 233