BLASTX nr result
ID: Zingiber25_contig00028490
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00028490
(254 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMS49582.1| hypothetical protein TRIUR3_12761 [Triticum urartu] 76 4e-12
ref|XP_003562777.1| PREDICTED: RING finger protein 170-like [Bra... 76 4e-12
ref|NP_001051839.1| Os03g0839000 [Oryza sativa Japonica Group] g... 75 7e-12
gb|EEC76490.1| hypothetical protein OsI_14243 [Oryza sativa Indi... 75 9e-12
ref|XP_006650873.1| PREDICTED: E3 ubiquitin-protein ligase RNF17... 74 3e-11
ref|XP_004981118.1| PREDICTED: E3 ubiquitin-protein ligase RNF17... 73 3e-11
ref|XP_006473244.1| PREDICTED: E3 ubiquitin-protein ligase RNF17... 72 6e-11
ref|XP_002463559.1| hypothetical protein SORBIDRAFT_01g001920 [S... 72 8e-11
tpg|DAA52399.1| TPA: protein binding protein [Zea mays] 71 1e-10
gb|ACG32881.1| protein binding protein [Zea mays] 71 1e-10
ref|XP_006856731.1| hypothetical protein AMTR_s00054p00206420 [A... 70 4e-10
ref|XP_006434670.1| hypothetical protein CICLE_v10002598mg [Citr... 68 1e-09
gb|AFK34661.1| unknown [Lotus japonicus] 67 2e-09
ref|XP_004299808.1| PREDICTED: E3 ubiquitin-protein ligase RNF17... 67 3e-09
ref|XP_002325966.1| zinc finger family protein [Populus trichoca... 67 3e-09
ref|XP_002264470.1| PREDICTED: RING finger protein 170 [Vitis vi... 66 4e-09
gb|ADV02777.1| C3HC4-type zinc RING finger family protein [Ipomo... 65 7e-09
ref|NP_564172.1| C3HC4-type RING finger protein [Arabidopsis tha... 65 7e-09
ref|XP_003598061.1| RING finger protein [Medicago truncatula] gi... 65 7e-09
ref|NP_001185064.1| C3HC4-type RING finger protein [Arabidopsis ... 65 7e-09
>gb|EMS49582.1| hypothetical protein TRIUR3_12761 [Triticum urartu]
Length = 158
Score = 76.3 bits (186), Expect = 4e-12
Identities = 38/60 (63%), Positives = 44/60 (73%)
Frame = -2
Query: 253 RARTALSVLLSIGYVASPFDILSERIYGFVGFLDDFLVLVMVFIHLANMYRGLLLNRHGG 74
RAR L V+LS YV SP DIL E + G GF DDFL+LV+VF+HLA +YR LLL RHGG
Sbjct: 98 RARMILMVILSGVYVLSPVDILPESVLGLFGFFDDFLILVIVFLHLAAVYRSLLLYRHGG 157
>ref|XP_003562777.1| PREDICTED: RING finger protein 170-like [Brachypodium distachyon]
Length = 197
Score = 76.3 bits (186), Expect = 4e-12
Identities = 38/60 (63%), Positives = 43/60 (71%)
Frame = -2
Query: 253 RARTALSVLLSIGYVASPFDILSERIYGFVGFLDDFLVLVMVFIHLANMYRGLLLNRHGG 74
RAR L V LS YV SP DIL E + G GF DDFL+LV+VF+HLA +YR LLL RHGG
Sbjct: 137 RARMILMVALSAVYVLSPVDILPESVLGLFGFFDDFLILVIVFLHLAAVYRSLLLYRHGG 196
>ref|NP_001051839.1| Os03g0839000 [Oryza sativa Japonica Group]
gi|28376707|gb|AAO41137.1| unknown protein [Oryza sativa
Japonica Group] gi|108711996|gb|ABF99791.1| zinc finger
family protein, putative, expressed [Oryza sativa
Japonica Group] gi|113550310|dbj|BAF13753.1|
Os03g0839000 [Oryza sativa Japonica Group]
gi|215687212|dbj|BAG91777.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|222626133|gb|EEE60265.1| hypothetical protein
OsJ_13296 [Oryza sativa Japonica Group]
Length = 191
Score = 75.5 bits (184), Expect = 7e-12
Identities = 37/60 (61%), Positives = 43/60 (71%)
Frame = -2
Query: 253 RARTALSVLLSIGYVASPFDILSERIYGFVGFLDDFLVLVMVFIHLANMYRGLLLNRHGG 74
RAR + V LS YV SP DIL E + G GF DDFLVL++VF+HLA +YR LLL RHGG
Sbjct: 131 RARMVMMVALSAIYVLSPIDILPENVLGLFGFFDDFLVLLIVFLHLAAVYRSLLLYRHGG 190
>gb|EEC76490.1| hypothetical protein OsI_14243 [Oryza sativa Indica Group]
Length = 191
Score = 75.1 bits (183), Expect = 9e-12
Identities = 37/60 (61%), Positives = 43/60 (71%)
Frame = -2
Query: 253 RARTALSVLLSIGYVASPFDILSERIYGFVGFLDDFLVLVMVFIHLANMYRGLLLNRHGG 74
RAR + V LS YV SP DIL E + G GF DDFLVL++VF+HLA +YR LLL RHGG
Sbjct: 131 RARMVMMVALSAIYVLSPVDILPENVLGLFGFFDDFLVLLIVFLHLAAVYRSLLLYRHGG 190
>ref|XP_006650873.1| PREDICTED: E3 ubiquitin-protein ligase RNF170-like [Oryza
brachyantha]
Length = 191
Score = 73.6 bits (179), Expect = 3e-11
Identities = 36/60 (60%), Positives = 43/60 (71%)
Frame = -2
Query: 253 RARTALSVLLSIGYVASPFDILSERIYGFVGFLDDFLVLVMVFIHLANMYRGLLLNRHGG 74
RAR L V LS Y+ SP DIL E + G G+ DDFLVL++VF+HLA +YR LLL RHGG
Sbjct: 131 RARMILMVALSAIYILSPVDILPESVLGLCGYFDDFLVLLIVFLHLAAVYRSLLLYRHGG 190
>ref|XP_004981118.1| PREDICTED: E3 ubiquitin-protein ligase RNF170-like [Setaria
italica]
Length = 191
Score = 73.2 bits (178), Expect = 3e-11
Identities = 36/60 (60%), Positives = 43/60 (71%)
Frame = -2
Query: 253 RARTALSVLLSIGYVASPFDILSERIYGFVGFLDDFLVLVMVFIHLANMYRGLLLNRHGG 74
RAR + V LS YV SP DIL E + G GF+DD L+LV+VF+HLA +YR LLL RHGG
Sbjct: 131 RARMMMMVALSAIYVLSPVDILPESVLGLFGFVDDLLILVIVFLHLAAVYRSLLLYRHGG 190
>ref|XP_006473244.1| PREDICTED: E3 ubiquitin-protein ligase RNF170-like [Citrus
sinensis]
Length = 187
Score = 72.4 bits (176), Expect = 6e-11
Identities = 31/61 (50%), Positives = 44/61 (72%)
Frame = -2
Query: 253 RARTALSVLLSIGYVASPFDILSERIYGFVGFLDDFLVLVMVFIHLANMYRGLLLNRHGG 74
RAR ++++LS Y+ SP DI+ E + G VG LDD L+ +M F+H+A +YR +L NRHGG
Sbjct: 127 RARVYIAMILSAAYIFSPIDIIPEAVLGIVGLLDDLLIALMCFLHVAALYRAVLYNRHGG 186
Query: 73 A 71
A
Sbjct: 187 A 187
>ref|XP_002463559.1| hypothetical protein SORBIDRAFT_01g001920 [Sorghum bicolor]
gi|241917413|gb|EER90557.1| hypothetical protein
SORBIDRAFT_01g001920 [Sorghum bicolor]
Length = 191
Score = 72.0 bits (175), Expect = 8e-11
Identities = 35/60 (58%), Positives = 44/60 (73%)
Frame = -2
Query: 253 RARTALSVLLSIGYVASPFDILSERIYGFVGFLDDFLVLVMVFIHLANMYRGLLLNRHGG 74
RAR + V LS YV SP DIL E + G +GF+DD L+L++VF+HLA +YR LLL RHGG
Sbjct: 131 RARMMMMVALSAIYVLSPVDILPESMLGLLGFVDDLLILLIVFLHLAAVYRSLLLYRHGG 190
>tpg|DAA52399.1| TPA: protein binding protein [Zea mays]
Length = 196
Score = 71.2 bits (173), Expect = 1e-10
Identities = 35/60 (58%), Positives = 43/60 (71%)
Frame = -2
Query: 253 RARTALSVLLSIGYVASPFDILSERIYGFVGFLDDFLVLVMVFIHLANMYRGLLLNRHGG 74
RAR + V LS YV SP DIL E + G GF+DD L+L++VF+HLA +YR LLL RHGG
Sbjct: 136 RARMLMMVALSAIYVLSPVDILPESMLGLFGFVDDLLILLIVFLHLAAVYRSLLLYRHGG 195
>gb|ACG32881.1| protein binding protein [Zea mays]
Length = 196
Score = 71.2 bits (173), Expect = 1e-10
Identities = 35/60 (58%), Positives = 43/60 (71%)
Frame = -2
Query: 253 RARTALSVLLSIGYVASPFDILSERIYGFVGFLDDFLVLVMVFIHLANMYRGLLLNRHGG 74
RAR + V LS YV SP DIL E + G GF+DD L+L++VF+HLA +YR LLL RHGG
Sbjct: 136 RARMLMMVALSAIYVLSPVDILPESMLGLFGFVDDLLILLIVFLHLAAVYRSLLLYRHGG 195
>ref|XP_006856731.1| hypothetical protein AMTR_s00054p00206420 [Amborella trichopoda]
gi|548860631|gb|ERN18198.1| hypothetical protein
AMTR_s00054p00206420 [Amborella trichopoda]
Length = 187
Score = 69.7 bits (169), Expect = 4e-10
Identities = 33/61 (54%), Positives = 44/61 (72%)
Frame = -2
Query: 253 RARTALSVLLSIGYVASPFDILSERIYGFVGFLDDFLVLVMVFIHLANMYRGLLLNRHGG 74
RAR +S+ +S+ YV SP DIL E I G +G LDD L++++V +HLA MYR LL RHGG
Sbjct: 126 RARIFISMFVSVLYVLSPIDILPEAILGVIGLLDDALIVLVVLLHLAAMYRSALLYRHGG 185
Query: 73 A 71
+
Sbjct: 186 S 186
>ref|XP_006434670.1| hypothetical protein CICLE_v10002598mg [Citrus clementina]
gi|557536792|gb|ESR47910.1| hypothetical protein
CICLE_v10002598mg [Citrus clementina]
Length = 187
Score = 68.2 bits (165), Expect = 1e-09
Identities = 29/61 (47%), Positives = 43/61 (70%)
Frame = -2
Query: 253 RARTALSVLLSIGYVASPFDILSERIYGFVGFLDDFLVLVMVFIHLANMYRGLLLNRHGG 74
RAR ++++ S Y+ SP DI+ E + G VG LDD L+ ++ F+H+A +YR +L NRHGG
Sbjct: 127 RARVYIAMIFSAVYIFSPIDIIPEALLGIVGLLDDLLIALLCFLHVAALYRAVLYNRHGG 186
Query: 73 A 71
A
Sbjct: 187 A 187
>gb|AFK34661.1| unknown [Lotus japonicus]
Length = 188
Score = 67.4 bits (163), Expect = 2e-09
Identities = 29/61 (47%), Positives = 45/61 (73%)
Frame = -2
Query: 253 RARTALSVLLSIGYVASPFDILSERIYGFVGFLDDFLVLVMVFIHLANMYRGLLLNRHGG 74
RAR +++++S YV SP DI+ E I+G VG LDD L++++ F+H+A +YR +L RHGG
Sbjct: 128 RARVYIAMIISAIYVFSPIDIIPEGIWGVVGLLDDLLIMLIFFLHVAALYRSVLYRRHGG 187
Query: 73 A 71
+
Sbjct: 188 S 188
>ref|XP_004299808.1| PREDICTED: E3 ubiquitin-protein ligase RNF170-like [Fragaria vesca
subsp. vesca]
Length = 185
Score = 66.6 bits (161), Expect = 3e-09
Identities = 27/61 (44%), Positives = 43/61 (70%)
Frame = -2
Query: 253 RARTALSVLLSIGYVASPFDILSERIYGFVGFLDDFLVLVMVFIHLANMYRGLLLNRHGG 74
RAR ++ +L+ Y+ SP D + E I+G VG LDD L+ ++VF+H+A +Y+ +L RHGG
Sbjct: 125 RARVIIATILTGAYILSPVDFIPEAIFGIVGLLDDLLITLVVFLHIATIYQSVLYQRHGG 184
Query: 73 A 71
+
Sbjct: 185 S 185
>ref|XP_002325966.1| zinc finger family protein [Populus trichocarpa]
gi|222862841|gb|EEF00348.1| zinc finger family protein
[Populus trichocarpa]
Length = 185
Score = 66.6 bits (161), Expect = 3e-09
Identities = 32/61 (52%), Positives = 44/61 (72%)
Frame = -2
Query: 253 RARTALSVLLSIGYVASPFDILSERIYGFVGFLDDFLVLVMVFIHLANMYRGLLLNRHGG 74
RAR ++V+LS YV SP DI+ E I G VG LDD LV+++ F+H+A +YR +L RHGG
Sbjct: 125 RARVYIAVVLSAIYVISPIDIIPEGILGIVGLLDDLLVVLICFLHVAAIYRAVLHYRHGG 184
Query: 73 A 71
+
Sbjct: 185 S 185
>ref|XP_002264470.1| PREDICTED: RING finger protein 170 [Vitis vinifera]
gi|296089528|emb|CBI39347.3| unnamed protein product
[Vitis vinifera]
Length = 186
Score = 66.2 bits (160), Expect = 4e-09
Identities = 28/60 (46%), Positives = 43/60 (71%)
Frame = -2
Query: 253 RARTALSVLLSIGYVASPFDILSERIYGFVGFLDDFLVLVMVFIHLANMYRGLLLNRHGG 74
RAR ++L SI Y+ SP DI+ E + G +G LDDF++ + F+H+A +YR +L++RHGG
Sbjct: 126 RARVYFAMLTSIIYIVSPVDIIPEGVVGILGLLDDFIIAFICFLHIAAIYRSVLVHRHGG 185
>gb|ADV02777.1| C3HC4-type zinc RING finger family protein [Ipomoea batatas]
Length = 186
Score = 65.5 bits (158), Expect = 7e-09
Identities = 29/59 (49%), Positives = 41/59 (69%)
Frame = -2
Query: 253 RARTALSVLLSIGYVASPFDILSERIYGFVGFLDDFLVLVMVFIHLANMYRGLLLNRHG 77
RAR L+ LS+ YV SP DI+ E G +GFLDD +++ + F+H+A +YR LL+ RHG
Sbjct: 125 RARVYLAAFLSVLYVLSPIDIIPEGFLGIIGFLDDLIIVFICFLHVAALYRSLLVFRHG 183
>ref|NP_564172.1| C3HC4-type RING finger protein [Arabidopsis thaliana]
gi|110740529|dbj|BAE98370.1| hypothetical protein
[Arabidopsis thaliana] gi|332192128|gb|AEE30249.1|
C3HC4-type RING finger protein [Arabidopsis thaliana]
Length = 185
Score = 65.5 bits (158), Expect = 7e-09
Identities = 27/61 (44%), Positives = 44/61 (72%)
Frame = -2
Query: 253 RARTALSVLLSIGYVASPFDILSERIYGFVGFLDDFLVLVMVFIHLANMYRGLLLNRHGG 74
RAR ++++LS Y+ SP DI+ E + G +G LDD L+ ++ F+H+A +YR +L +RHGG
Sbjct: 125 RARVYIALILSAIYIISPIDIIPEGVLGVIGLLDDLLIALICFLHVAALYRSVLYSRHGG 184
Query: 73 A 71
+
Sbjct: 185 S 185
>ref|XP_003598061.1| RING finger protein [Medicago truncatula]
gi|355487109|gb|AES68312.1| RING finger protein
[Medicago truncatula]
Length = 192
Score = 65.5 bits (158), Expect = 7e-09
Identities = 29/61 (47%), Positives = 44/61 (72%)
Frame = -2
Query: 253 RARTALSVLLSIGYVASPFDILSERIYGFVGFLDDFLVLVMVFIHLANMYRGLLLNRHGG 74
RAR +++LLSI Y+ SP DI+ E + G +G LDD L+ ++ F+H+A +YR +L RHGG
Sbjct: 132 RARVFITMLLSIIYIFSPIDIIPEGMLGIIGLLDDVLIALIFFLHVAALYRSVLYLRHGG 191
Query: 73 A 71
+
Sbjct: 192 S 192
>ref|NP_001185064.1| C3HC4-type RING finger protein [Arabidopsis thaliana]
gi|332192129|gb|AEE30250.1| C3HC4-type RING finger
protein [Arabidopsis thaliana]
Length = 203
Score = 65.5 bits (158), Expect = 7e-09
Identities = 27/61 (44%), Positives = 44/61 (72%)
Frame = -2
Query: 253 RARTALSVLLSIGYVASPFDILSERIYGFVGFLDDFLVLVMVFIHLANMYRGLLLNRHGG 74
RAR ++++LS Y+ SP DI+ E + G +G LDD L+ ++ F+H+A +YR +L +RHGG
Sbjct: 143 RARVYIALILSAIYIISPIDIIPEGVLGVIGLLDDLLIALICFLHVAALYRSVLYSRHGG 202
Query: 73 A 71
+
Sbjct: 203 S 203