BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00028311
         (455 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272104.1| PREDICTED: pentatricopeptide repeat-containi...   124   1e-26
gb|EOY01389.1| Pentatricopeptide repeat 336, putative [Theobroma...   121   8e-26
ref|NP_001144243.1| hypothetical protein [Zea mays] gi|195638968...   115   8e-24
ref|XP_002454838.1| hypothetical protein SORBIDRAFT_04g038280 [S...   111   9e-23
ref|XP_006648168.1| PREDICTED: pentatricopeptide repeat-containi...   109   4e-22
ref|XP_006847891.1| hypothetical protein AMTR_s00029p00104100 [A...   108   7e-22
dbj|BAJ87291.1| predicted protein [Hordeum vulgare subsp. vulgare]    106   3e-21
ref|XP_004136798.1| PREDICTED: pentatricopeptide repeat-containi...   104   1e-20
ref|NP_001048609.1| Os02g0829800 [Oryza sativa Japonica Group] g...   103   2e-20
gb|EAY72213.1| hypothetical protein OsI_00065 [Oryza sativa Indi...   103   2e-20
emb|CBI41008.3| unnamed protein product [Vitis vinifera]              102   5e-20
ref|XP_002884947.1| hypothetical protein ARALYDRAFT_897532 [Arab...   100   2e-19
gb|EXB75243.1| hypothetical protein L484_026025 [Morus notabilis]     100   3e-19
ref|XP_006407257.1| hypothetical protein EUTSA_v10020781mg [Eutr...   100   3e-19
ref|NP_187922.1| pentatricopeptide repeat-containing protein [Ar...   100   3e-19
gb|EOY28516.1| Pentatricopeptide repeat-containing protein, puta...    99   5e-19
ref|XP_006297464.1| hypothetical protein CARUB_v10013484mg [Caps...    99   5e-19
gb|EMT19443.1| hypothetical protein F775_43747 [Aegilops tauschii]     99   5e-19
ref|XP_003635178.1| PREDICTED: pentatricopeptide repeat-containi...    99   5e-19
ref|XP_002518584.1| pentatricopeptide repeat-containing protein,...    99   5e-19

>ref|XP_002272104.1| PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
           mitochondrial [Vitis vinifera]
           gi|297738261|emb|CBI27462.3| unnamed protein product
           [Vitis vinifera]
          Length = 386

 Score =  124 bits (311), Expect = 1e-26
 Identities = 67/150 (44%), Positives = 92/150 (61%)
 Frame = +1

Query: 4   PKSEGFLIRLIGLYSEAGMVDQAVRVFENIPSLAGQRSERSLCALLSAFLDNGCIERLQD 183
           P++EGF IRLI LYS +GMVD A+R F  +     Q +E+SLCA+L+ +LDN  I++L  
Sbjct: 93  PRTEGFWIRLIMLYSTSGMVDHALRTFHQMVQDRVQLTEKSLCAILTVYLDNDLIDQLHT 152

Query: 184 AFSRSVEEYGVAPGIASYNIYLKALCSSSANKVDEALALFDQMHDKGIEPDISCYNTLLD 363
            F+    E GV+PG  SY++ LKA C      ++ A  L  +M +    PDI  YN LL+
Sbjct: 153 VFNTMPSEIGVSPGTKSYSLVLKAFCQQ--KDMESARKLLHKMEN----PDIGSYNVLLE 206

Query: 364 GYSKKGDYAGFDKVLKEICKKGLSQNVGTY 453
            YS+ GD   FD++LKEI  KGL  +  TY
Sbjct: 207 AYSENGDGVEFDEILKEIKNKGLEHDCTTY 236


>gb|EOY01389.1| Pentatricopeptide repeat 336, putative [Theobroma cacao]
          Length = 395

 Score =  121 bits (304), Expect = 8e-26
 Identities = 67/150 (44%), Positives = 96/150 (64%), Gaps = 1/150 (0%)
 Frame = +1

Query: 7   KSEGFLIRLIGLYSEAGMVDQAVRVFENI-PSLAGQRSERSLCALLSAFLDNGCIERLQD 183
           KSEGF IRLI LYS AGMV QA++  E++  +     SE+SLCA+L+ +L+NG  E++ +
Sbjct: 101 KSEGFWIRLIMLYSNAGMVPQALQTLEDLCQNRYSIVSEKSLCAILTVYLNNGMFEQIYE 160

Query: 184 AFSRSVEEYGVAPGIASYNIYLKALCSSSANKVDEALALFDQMHDKGIEPDISCYNTLLD 363
           +F    E+ GV P + S+N+ LKA      NK++ AL   ++M    + P+I+ YN LL 
Sbjct: 161 SFKTIPEKLGVKPSVVSHNLILKAFVKE--NKLESALEWVEKMD---VSPNIATYNILLG 215

Query: 364 GYSKKGDYAGFDKVLKEICKKGLSQNVGTY 453
           GY K GD  GFD  +KE+ +KGL  N+ TY
Sbjct: 216 GYLKNGDENGFDGAMKEVSRKGLEGNLTTY 245


>ref|NP_001144243.1| hypothetical protein [Zea mays] gi|195638968|gb|ACG38952.1|
           hypothetical protein [Zea mays]
           gi|413939592|gb|AFW74143.1| hypothetical protein
           ZEAMMB73_602318 [Zea mays]
          Length = 419

 Score =  115 bits (287), Expect = 8e-24
 Identities = 71/151 (47%), Positives = 92/151 (60%), Gaps = 3/151 (1%)
 Frame = +1

Query: 10  SEGFLIRLIGLYSEAGMVDQAVRVFENIPSLAGQRSERSLCALLSAFLDNGCIERLQDAF 189
           SEGFL+RLI LYS AGM D ++ VF     L    S+R+L ALLSA+ DN   +R   AF
Sbjct: 113 SEGFLLRLISLYSAAGMPDHSLAVFR----LVKPASDRALSALLSAYHDNRLYDRTVRAF 168

Query: 190 SRSVEEYGVAPGIASYNIYLKALCSSSANKVDEALALFDQMHD-KGIEPDISCYNTLLDG 366
           +    E G+ PG+ S+N+ LKAL +S    V  A  LFD+M D  G++PDI   N +L G
Sbjct: 169 NTLPAELGIKPGLVSHNVLLKALVAS--GDVAAAHTLFDEMPDTAGVQPDIVSCNEILKG 226

Query: 367 YSKKGDYAGFDKVLKEIC--KKGLSQNVGTY 453
           Y   GD   FD+++KEI   K+ L  NVGTY
Sbjct: 227 YLNAGDADAFDRLVKEIAGPKRRLKPNVGTY 257


>ref|XP_002454838.1| hypothetical protein SORBIDRAFT_04g038280 [Sorghum bicolor]
           gi|241934669|gb|EES07814.1| hypothetical protein
           SORBIDRAFT_04g038280 [Sorghum bicolor]
          Length = 419

 Score =  111 bits (278), Expect = 9e-23
 Identities = 68/151 (45%), Positives = 91/151 (60%), Gaps = 3/151 (1%)
 Frame = +1

Query: 10  SEGFLIRLIGLYSEAGMVDQAVRVFENIPSLAGQRSERSLCALLSAFLDNGCIERLQDAF 189
           SEGFL+RLI LYS AGM D ++ VF     L    S+R+L ALLS + DN   +R   AF
Sbjct: 113 SEGFLLRLISLYSAAGMPDHSLTVFR----LVNPPSDRALSALLSTYHDNRLYDRAVRAF 168

Query: 190 SRSVEEYGVAPGIASYNIYLKALCSSSANKVDEALALFDQMHD-KGIEPDISCYNTLLDG 366
           +    E G+ PG+ S+N+ LKAL +S    +  A + FD+M D  G++PDI   N +L G
Sbjct: 169 NTLPAELGIKPGLVSHNVLLKALVAS--GDIAAARSAFDKMPDTAGVQPDIVSCNEILKG 226

Query: 367 YSKKGDYAGFDKVLKEIC--KKGLSQNVGTY 453
           Y   GD A FD+++KEI    + L  NVGTY
Sbjct: 227 YLSTGDDAAFDQLVKEIAGPNRRLKPNVGTY 257


>ref|XP_006648168.1| PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
           mitochondrial-like [Oryza brachyantha]
          Length = 422

 Score =  109 bits (272), Expect = 4e-22
 Identities = 70/154 (45%), Positives = 89/154 (57%), Gaps = 6/154 (3%)
 Frame = +1

Query: 10  SEGFLIRLIGLYSEAGMVDQAVRVFENIPSLAGQRSERSLCALLSAFLDNGCIERLQDAF 189
           SEGFLIRLI LYS AGM D ++  F  I       S+R+L ALLSA+ DN   +R   AF
Sbjct: 113 SEGFLIRLISLYSAAGMPDHSLSTFRII----SPPSDRALSALLSAYHDNRLYDRAIQAF 168

Query: 190 SRSVEEYGVAPGIASYNIYLKALCSSSANKVDEALALFDQMHDK-GIEPDISCYNTLLDG 366
                E G+ P + S+N+ LK+L ++    V  A ALFD+M  K G+EPDI   N +L G
Sbjct: 169 RTLPAELGIKPSVVSHNVLLKSLVAN--GDVASARALFDEMPVKAGVEPDIVSCNEILKG 226

Query: 367 YSKKGDYAGFDKVLKE-----ICKKGLSQNVGTY 453
           Y    DYA FD+ LK+       K+ L  NVGTY
Sbjct: 227 YLNTADYAAFDQFLKDNTTATAGKRRLKPNVGTY 260


>ref|XP_006847891.1| hypothetical protein AMTR_s00029p00104100 [Amborella trichopoda]
           gi|548851196|gb|ERN09472.1| hypothetical protein
           AMTR_s00029p00104100 [Amborella trichopoda]
          Length = 454

 Score =  108 bits (270), Expect = 7e-22
 Identities = 57/147 (38%), Positives = 89/147 (60%)
 Frame = +1

Query: 13  EGFLIRLIGLYSEAGMVDQAVRVFENIPSLAGQRSERSLCALLSAFLDNGCIERLQDAFS 192
           EGF+IRLI LYSEAGMVD+A+  F  +  L   RSE+S  A LS  L N   + +   F 
Sbjct: 161 EGFIIRLILLYSEAGMVDKALDTFYEMDELECPRSEKSFSATLSGLLLNKRFDDVHRLFD 220

Query: 193 RSVEEYGVAPGIASYNIYLKALCSSSANKVDEALALFDQMHDKGIEPDISCYNTLLDGYS 372
               ++ ++P + +Y+I ++A C    + +D A  +  +M   GI+PD+  YNTL+DG+ 
Sbjct: 221 EIPNKFDISPTVFTYDIIIRAFCEE--HLLDSAFEMLGKMEKIGIKPDVVSYNTLIDGFL 278

Query: 373 KKGDYAGFDKVLKEICKKGLSQNVGTY 453
           + GD    D++LKE+ +KG + ++ TY
Sbjct: 279 RAGDQTRVDELLKEMTEKGCAPDLVTY 305



 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 38/141 (26%), Positives = 67/141 (47%)
 Frame = +1

Query: 31  LIGLYSEAGMVDQAVRVFENIPSLAGQRSERSLCALLSAFLDNGCIERLQDAFSRSVEEY 210
           +I  + E  ++D A  +   +  +  +    S   L+  FL  G   R+ D   + + E 
Sbjct: 238 IIRAFCEEHLLDSAFEMLGKMEKIGIKPDVVSYNTLIDGFLRAGDQTRV-DELLKEMTEK 296

Query: 211 GVAPGIASYNIYLKALCSSSANKVDEALALFDQMHDKGIEPDISCYNTLLDGYSKKGDYA 390
           G AP + +YN+ +   C    +   +A AL ++M  +GI P+   YN ++ G+ K+G+  
Sbjct: 297 GCAPDLVTYNLRILGFCKDKESV--KAQALLEEMRSRGIRPNSRSYNAVIFGFYKEGNLE 354

Query: 391 GFDKVLKEICKKGLSQNVGTY 453
              +V + I K   S N GTY
Sbjct: 355 EARRVYESIPKGDESPNSGTY 375


>dbj|BAJ87291.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 422

 Score =  106 bits (265), Expect = 3e-21
 Identities = 68/151 (45%), Positives = 88/151 (58%), Gaps = 3/151 (1%)
 Frame = +1

Query: 10  SEGFLIRLIGLYSEAGMVDQAVRVFENIPSLAGQRSERSLCALLSAFLDNGCIERLQDAF 189
           SEGFLIRLI LY++AGM   ++  F     L    S+R+L ALL+A+ D G   R   AF
Sbjct: 115 SEGFLIRLIALYADAGMPTHSLSTFR----LVVPPSDRALSALLAAYHDAGQPARAIQAF 170

Query: 190 SRSVEEYGVAPGIASYNIYLKALCSSSANKVDEALALFDQMHDK-GIEPDISCYNTLLDG 366
                E  +APG+ S+N+ LK  C  +   V  A  +FD M DK G++PDI   N +L G
Sbjct: 171 RDLSAELSIAPGVVSHNVLLK--CMVATGDVAGARQVFDGMPDKAGLQPDIVSCNEMLKG 228

Query: 367 YSKKGDYAGFDKVLKEIC--KKGLSQNVGTY 453
           Y K GDYA FD +LKE+   K+ L  NV TY
Sbjct: 229 YLKTGDYAAFDLLLKEVTGGKRRLKPNVTTY 259


>ref|XP_004136798.1| PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
           mitochondrial-like [Cucumis sativus]
           gi|449494815|ref|XP_004159654.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g61870,
           mitochondrial-like [Cucumis sativus]
          Length = 405

 Score =  104 bits (259), Expect = 1e-20
 Identities = 63/151 (41%), Positives = 86/151 (56%), Gaps = 3/151 (1%)
 Frame = +1

Query: 10  SEGFLIRLIGLYSEAGMVDQAVRVFEN-IPSLAGQRSERSLCALLSAFLDNGCIERLQDA 186
           SEGF IRLI LYS  GMV+QA+ + +  I   +   SE+SLCA+LS FLDN   E++ + 
Sbjct: 107 SEGFWIRLIMLYSSVGMVNQALYILDQAILHKSCNLSEKSLCAILSVFLDNSMPEKVHEM 166

Query: 187 FSRSVEEYGVAPGIASYNIYLKALCSSSANKVDEALALFDQM--HDKGIEPDISCYNTLL 360
           F    E+ GV P   S+N+ LKA      N +  A    D++   D  + P+I  +  LL
Sbjct: 167 FRSIPEKIGVTPTAVSHNLVLKAFVRQ--NDLPSARNWIDELCKDDAKVIPNIDSFTILL 224

Query: 361 DGYSKKGDYAGFDKVLKEICKKGLSQNVGTY 453
             Y   GD  GFD++ KEI K+GL  N+ TY
Sbjct: 225 GAYWSNGDMIGFDEIEKEISKRGLEFNLATY 255


>ref|NP_001048609.1| Os02g0829800 [Oryza sativa Japonica Group]
           gi|48716331|dbj|BAD22943.1| membrane-associated
           salt-inducible protein-like [Oryza sativa Japonica
           Group] gi|113538140|dbj|BAF10523.1| Os02g0829800 [Oryza
           sativa Japonica Group] gi|125584252|gb|EAZ25183.1|
           hypothetical protein OsJ_08983 [Oryza sativa Japonica
           Group] gi|215769058|dbj|BAH01287.1| unnamed protein
           product [Oryza sativa Japonica Group]
          Length = 423

 Score =  103 bits (258), Expect = 2e-20
 Identities = 66/154 (42%), Positives = 86/154 (55%), Gaps = 6/154 (3%)
 Frame = +1

Query: 10  SEGFLIRLIGLYSEAGMVDQAVRVFENIPSLAGQRSERSLCALLSAFLDNGCIERLQDAF 189
           SEGFLIRLI LYS AGM D ++  F     +    S+R+L ALLSA+ DN   +R   AF
Sbjct: 114 SEGFLIRLISLYSAAGMPDHSLSTFR----IVTPPSDRALSALLSAYHDNRLYDRAIQAF 169

Query: 190 SRSVEEYGVAPGIASYNIYLKALCSSSANKVDEALALFDQMHDKG-IEPDISCYNTLLDG 366
                E G+ P + S+N+ LK+  +S    +  A ALFD+M  K  +EPDI   N +L G
Sbjct: 170 RTLPAELGIKPSVVSHNVLLKSFVAS--GDLASARALFDEMPSKADVEPDIVSCNEILKG 227

Query: 367 YSKKGDYAGFDKVLKEIC-----KKGLSQNVGTY 453
           Y    DYA FD+ LK+       K+ L  NV TY
Sbjct: 228 YLNAADYAAFDQFLKDNTTAAGGKRRLKPNVSTY 261


>gb|EAY72213.1| hypothetical protein OsI_00065 [Oryza sativa Indica Group]
          Length = 423

 Score =  103 bits (258), Expect = 2e-20
 Identities = 66/154 (42%), Positives = 86/154 (55%), Gaps = 6/154 (3%)
 Frame = +1

Query: 10  SEGFLIRLIGLYSEAGMVDQAVRVFENIPSLAGQRSERSLCALLSAFLDNGCIERLQDAF 189
           SEGFLIRLI LYS AGM D ++  F     +    S+R+L ALLSA+ DN   +R   AF
Sbjct: 114 SEGFLIRLISLYSAAGMPDHSLSTFR----IVTPPSDRALSALLSAYHDNRLYDRAIQAF 169

Query: 190 SRSVEEYGVAPGIASYNIYLKALCSSSANKVDEALALFDQMHDKG-IEPDISCYNTLLDG 366
                E G+ P + S+N+ LK+  +S    +  A ALFD+M  K  +EPDI   N +L G
Sbjct: 170 RTLPAELGIKPSVVSHNVLLKSFVAS--GDLASARALFDEMPSKADVEPDIVSCNEILKG 227

Query: 367 YSKKGDYAGFDKVLKEIC-----KKGLSQNVGTY 453
           Y    DYA FD+ LK+       K+ L  NV TY
Sbjct: 228 YLNAADYAAFDQFLKDNTTAAGGKRRLKPNVSTY 261


>emb|CBI41008.3| unnamed protein product [Vitis vinifera]
          Length = 379

 Score =  102 bits (254), Expect = 5e-20
 Identities = 53/147 (36%), Positives = 84/147 (57%)
 Frame = +1

Query: 13  EGFLIRLIGLYSEAGMVDQAVRVFENIPSLAGQRSERSLCALLSAFLDNGCIERLQDAFS 192
           EGF +RLI LY ++GM D A +VF+ +P    +RS  S  ALL A + +   +++   F 
Sbjct: 102 EGFAVRLISLYGKSGMFDHAFKVFDEMPDQKCERSVLSFNALLGACVHSKKFDKIDGFFQ 161

Query: 193 RSVEEYGVAPGIASYNIYLKALCSSSANKVDEALALFDQMHDKGIEPDISCYNTLLDGYS 372
                 GV P + SYNI + A C   +  +D AL++ D+M   G+EPD+  +NTLL+ + 
Sbjct: 162 ELPGNLGVVPDVVSYNIIVNAFCEMGS--LDSALSVLDEMEKVGLEPDLITFNTLLNAFY 219

Query: 373 KKGDYAGFDKVLKEICKKGLSQNVGTY 453
           + G YA  +K+   + K  ++ NV +Y
Sbjct: 220 QNGSYADGEKIWDLMKKNNVAPNVRSY 246



 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 40/144 (27%), Positives = 70/144 (48%), Gaps = 3/144 (2%)
 Frame = +1

Query: 31  LIGLYSEAGMVDQAVRVFENIPSLAGQRSERSLCALLSAFLDNGCI---ERLQDAFSRSV 201
           ++  + E G +D A+ V + +  +  +    +   LL+AF  NG     E++ D   ++ 
Sbjct: 179 IVNAFCEMGSLDSALSVLDEMEKVGLEPDLITFNTLLNAFYQNGSYADGEKIWDLMKKN- 237

Query: 202 EEYGVAPGIASYNIYLKALCSSSANKVDEALALFDQMHDKGIEPDISCYNTLLDGYSKKG 381
               VAP + SYN  L+ + S   N++ EA+ L D+M   GI+PD+   N+L+ G+   G
Sbjct: 238 ---NVAPNVRSYNAKLRGVISE--NRMSEAVELIDEMKTSGIKPDVFTLNSLMKGFCNAG 292

Query: 382 DYAGFDKVLKEICKKGLSQNVGTY 453
           +     +   EI +  L     TY
Sbjct: 293 NLEEAKRWYSEIARNELPPVRATY 316


>ref|XP_002884947.1| hypothetical protein ARALYDRAFT_897532 [Arabidopsis lyrata subsp.
           lyrata] gi|297330787|gb|EFH61206.1| hypothetical protein
           ARALYDRAFT_897532 [Arabidopsis lyrata subsp. lyrata]
          Length = 528

 Score =  100 bits (250), Expect = 2e-19
 Identities = 48/149 (32%), Positives = 94/149 (63%)
 Frame = +1

Query: 7   KSEGFLIRLIGLYSEAGMVDQAVRVFENIPSLAGQRSERSLCALLSAFLDNGCIERLQDA 186
           KSE F+IR++ LY  +GM + A ++F+ +P L  +R+ +S  ALLSA++++  ++  + A
Sbjct: 123 KSEDFVIRIMLLYGYSGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSRKLDEAKKA 182

Query: 187 FSRSVEEYGVAPGIASYNIYLKALCSSSANKVDEALALFDQMHDKGIEPDISCYNTLLDG 366
           F    E+ G+ P + +YN  +KALC + +  +D+ L++F+++   G EPD+  +NTLL+ 
Sbjct: 183 FKELPEKLGITPDLVTYNTMIKALCRTGS--MDDILSIFEELEKNGFEPDLISFNTLLEE 240

Query: 367 YSKKGDYAGFDKVLKEICKKGLSQNVGTY 453
           + ++  +   D++   +  K L+ N+ +Y
Sbjct: 241 FYRRELFVEGDRIWDLMKSKNLAPNIRSY 269


>gb|EXB75243.1| hypothetical protein L484_026025 [Morus notabilis]
          Length = 371

 Score =  100 bits (248), Expect = 3e-19
 Identities = 55/149 (36%), Positives = 86/149 (57%)
 Frame = +1

Query: 7   KSEGFLIRLIGLYSEAGMVDQAVRVFENIPSLAGQRSERSLCALLSAFLDNGCIERLQDA 186
           + EGF IRLIGLY EAGM D A +VF+ +P L   R+ +SL ALL A LD    +++ + 
Sbjct: 95  RREGFSIRLIGLYGEAGMFDHAHKVFDELPELNCDRTVKSLNALLKAALDAKKFDKVIEI 154

Query: 187 FSRSVEEYGVAPGIASYNIYLKALCSSSANKVDEALALFDQMHDKGIEPDISCYNTLLDG 366
           F+       + P + SYNI + A C   +  +DEAL+LF ++ D G EPD+  +NTLL+ 
Sbjct: 155 FNELPSRVSIEPDMISYNIVIHAFCEMGS--LDEALSLFRKLEDNGQEPDLVTFNTLLNA 212

Query: 367 YSKKGDYAGFDKVLKEICKKGLSQNVGTY 453
                 ++  +++   +  K +  +V +Y
Sbjct: 213 LYMNNRFSEGERIWATMESKNVVPDVRSY 241


>ref|XP_006407257.1| hypothetical protein EUTSA_v10020781mg [Eutrema salsugineum]
           gi|557108403|gb|ESQ48710.1| hypothetical protein
           EUTSA_v10020781mg [Eutrema salsugineum]
          Length = 430

 Score = 99.8 bits (247), Expect = 3e-19
 Identities = 48/149 (32%), Positives = 92/149 (61%)
 Frame = +1

Query: 7   KSEGFLIRLIGLYSEAGMVDQAVRVFENIPSLAGQRSERSLCALLSAFLDNGCIERLQDA 186
           KSE F+IR++ LY  +GM + A ++F+ +P L  +R+ +S  ALLSA++++  ++    A
Sbjct: 121 KSEDFVIRMMLLYGYSGMAEHAHKLFDEMPELNCERTNKSFNALLSAYVNSRKVDEAMKA 180

Query: 187 FSRSVEEYGVAPGIASYNIYLKALCSSSANKVDEALALFDQMHDKGIEPDISCYNTLLDG 366
           F    E+ G+ P + +YN  +KALC   +  +D+ +++F+++   G+EPD+  +NTLL+ 
Sbjct: 181 FKELPEKLGITPDLVTYNTMIKALCLKGS--MDDIVSIFEELEKNGLEPDLITFNTLLEE 238

Query: 367 YSKKGDYAGFDKVLKEICKKGLSQNVGTY 453
           + ++   A  D++   +  K L  N+ +Y
Sbjct: 239 FYRRDLLAEGDRIWDLMKSKNLVPNIRSY 267


>ref|NP_187922.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75311241|sp|Q9LK58.1|PP225_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g13150 gi|10172602|dbj|BAB01406.1| unnamed protein
           product [Arabidopsis thaliana]
           gi|66792658|gb|AAY56431.1| At3g13150 [Arabidopsis
           thaliana] gi|332641781|gb|AEE75302.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 551

 Score = 99.8 bits (247), Expect = 3e-19
 Identities = 48/149 (32%), Positives = 91/149 (61%)
 Frame = +1

Query: 7   KSEGFLIRLIGLYSEAGMVDQAVRVFENIPSLAGQRSERSLCALLSAFLDNGCIERLQDA 186
           KSE F+IR++ LY  +GM + A ++F+ +P L  +R+ +S  ALLSA++++  ++     
Sbjct: 120 KSEDFVIRIMLLYGYSGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKT 179

Query: 187 FSRSVEEYGVAPGIASYNIYLKALCSSSANKVDEALALFDQMHDKGIEPDISCYNTLLDG 366
           F    E+ G+ P + +YN  +KALC   +  +D+ L++F+++   G EPD+  +NTLL+ 
Sbjct: 180 FKELPEKLGITPDLVTYNTMIKALCRKGS--MDDILSIFEELEKNGFEPDLISFNTLLEE 237

Query: 367 YSKKGDYAGFDKVLKEICKKGLSQNVGTY 453
           + ++  +   D++   +  K LS N+ +Y
Sbjct: 238 FYRRELFVEGDRIWDLMKSKNLSPNIRSY 266


>gb|EOY28516.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
           cacao]
          Length = 383

 Score = 99.4 bits (246), Expect = 5e-19
 Identities = 58/150 (38%), Positives = 90/150 (60%), Gaps = 3/150 (2%)
 Frame = +1

Query: 13  EGFLIRLIGLYSEAGMVDQAVRVFENIPSLAGQRSERSLCALLSAFLDN---GCIERLQD 183
           EGF+IRL+ LY +AGM + A ++F+ +P L   R+ +S  ALLSA + +   G +E+L  
Sbjct: 101 EGFVIRLMTLYGKAGMFEHAQKLFDEMPELKCDRTVKSFNALLSACIYSEKFGNVEQLL- 159

Query: 184 AFSRSVEEYGVAPGIASYNIYLKALCSSSANKVDEALALFDQMHDKGIEPDISCYNTLLD 363
              +  E+ G+ P + SYN  +KA C   +  +D AL++ D +  KG+EPD+  +NTLLD
Sbjct: 160 ---KLPEKLGIEPDLVSYNTVIKAFCEMGS--LDSALSVVDTLEKKGLEPDVITFNTLLD 214

Query: 364 GYSKKGDYAGFDKVLKEICKKGLSQNVGTY 453
           G   KG  A  +K+   + +K +  NV TY
Sbjct: 215 GLFSKGRIADGEKIWGLMEEKNVVPNVRTY 244



 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 38/141 (26%), Positives = 68/141 (48%)
 Frame = +1

Query: 31  LIGLYSEAGMVDQAVRVFENIPSLAGQRSERSLCALLSAFLDNGCIERLQDAFSRSVEEY 210
           +I  + E G +D A+ V + +     +    +   LL      G I   +  +   +EE 
Sbjct: 177 VIKAFCEMGSLDSALSVVDTLEKKGLEPDVITFNTLLDGLFSKGRIADGEKIWGL-MEEK 235

Query: 211 GVAPGIASYNIYLKALCSSSANKVDEALALFDQMHDKGIEPDISCYNTLLDGYSKKGDYA 390
            V P + +YN  L+ L      ++ +A+ L+++M +KGI+PD+  YN ++ GY   G+  
Sbjct: 236 NVVPNVRTYNSKLRGLVYEK--EIVKAVELWEEMENKGIKPDVYSYNAMIKGYCNAGNIE 293

Query: 391 GFDKVLKEICKKGLSQNVGTY 453
              K   E+ K G+S +  TY
Sbjct: 294 QVKKWYTELKKSGISPDRVTY 314


>ref|XP_006297464.1| hypothetical protein CARUB_v10013484mg [Capsella rubella]
           gi|482566173|gb|EOA30362.1| hypothetical protein
           CARUB_v10013484mg [Capsella rubella]
          Length = 509

 Score = 99.4 bits (246), Expect = 5e-19
 Identities = 47/149 (31%), Positives = 93/149 (62%)
 Frame = +1

Query: 7   KSEGFLIRLIGLYSEAGMVDQAVRVFENIPSLAGQRSERSLCALLSAFLDNGCIERLQDA 186
           KSE F+IR++ LY  +GM + A ++F+ +P L  +R+ +S   LLSA++++  ++    A
Sbjct: 117 KSEDFVIRMMLLYGYSGMAEHAHKLFDEMPELNCERTVKSFNTLLSAYVNSRKVDEAIKA 176

Query: 187 FSRSVEEYGVAPGIASYNIYLKALCSSSANKVDEALALFDQMHDKGIEPDISCYNTLLDG 366
           F +  E+ G+ P + +YN  +KALC   +  +D+ +++F+++   G+EPD+  +NTLL+ 
Sbjct: 177 FKQLPEKLGITPDLVTYNTMIKALCRKGS--MDDIVSIFEELDKNGLEPDLITFNTLLEE 234

Query: 367 YSKKGDYAGFDKVLKEICKKGLSQNVGTY 453
           + ++  +   D++   +  K L+ N+ TY
Sbjct: 235 FYRRDLFVEGDRIWDLMKSKNLAPNIRTY 263


>gb|EMT19443.1| hypothetical protein F775_43747 [Aegilops tauschii]
          Length = 326

 Score = 99.4 bits (246), Expect = 5e-19
 Identities = 65/151 (43%), Positives = 85/151 (56%), Gaps = 3/151 (1%)
 Frame = +1

Query: 10  SEGFLIRLIGLYSEAGMVDQAVRVFENIPSLAGQRSERSLCALLSAFLDNGCIERLQDAF 189
           SEGFLIRLI LY+ AGM   ++  F     L    S+R+L ALL A+   G   R  +AF
Sbjct: 19  SEGFLIRLIALYAAAGMPTHSLSTFR----LVVPPSDRALSALLGAYHYAGQPARAIEAF 74

Query: 190 SRSVEEYGVAPGIASYNIYLKALCSSSANKVDEALALFDQMHDK-GIEPDISCYNTLLDG 366
                E  + PG+ S+N+ LK  C  +   V  A  +FD M DK G++PDI   N +L G
Sbjct: 75  RDLPAELSITPGVVSHNVLLK--CMVATGDVAGARQVFDGMPDKAGVQPDIVSCNEMLKG 132

Query: 367 YSKKGDYAGFDKVLKEIC--KKGLSQNVGTY 453
           Y K GD+A FD +LKE+   K+ L  NV TY
Sbjct: 133 YLKTGDHAAFDLLLKEVTGGKRRLKPNVTTY 163


>ref|XP_003635178.1| PREDICTED: pentatricopeptide repeat-containing protein At1g55890,
           mitochondrial-like [Vitis vinifera]
          Length = 379

 Score = 99.4 bits (246), Expect = 5e-19
 Identities = 51/148 (34%), Positives = 86/148 (58%)
 Frame = +1

Query: 10  SEGFLIRLIGLYSEAGMVDQAVRVFENIPSLAGQRSERSLCALLSAFLDNGCIERLQDAF 189
           +E F +RL+ LY  AGM D A ++F+ +P L  +R+  S  ALLSA +++   +++   F
Sbjct: 91  TEVFAVRLMTLYGTAGMFDHAHKLFDELPKLNCERTVMSFNALLSACVNSKKFDKIDGFF 150

Query: 190 SRSVEEYGVAPGIASYNIYLKALCSSSANKVDEALALFDQMHDKGIEPDISCYNTLLDGY 369
                  G+ P + SYNI + A C   +  +D AL++ D+M   G+EPD+  +NTLL+ +
Sbjct: 151 QELPGNLGIVPDVVSYNILVNAFCEMGS--LDSALSVLDEMEKVGLEPDLITFNTLLNAF 208

Query: 370 SKKGDYAGFDKVLKEICKKGLSQNVGTY 453
            + G YA  +K+   + K  ++ NV +Y
Sbjct: 209 YQNGSYADGEKIWDLMKKNNVAPNVRSY 236



 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 41/144 (28%), Positives = 70/144 (48%), Gaps = 3/144 (2%)
 Frame = +1

Query: 31  LIGLYSEAGMVDQAVRVFENIPSLAGQRSERSLCALLSAFLDNGCI---ERLQDAFSRSV 201
           L+  + E G +D A+ V + +  +  +    +   LL+AF  NG     E++ D   ++ 
Sbjct: 169 LVNAFCEMGSLDSALSVLDEMEKVGLEPDLITFNTLLNAFYQNGSYADGEKIWDLMKKN- 227

Query: 202 EEYGVAPGIASYNIYLKALCSSSANKVDEALALFDQMHDKGIEPDISCYNTLLDGYSKKG 381
               VAP + SYN  L+ + S   N++ EA+ L D+M   GI+PD+   N+L+ G+   G
Sbjct: 228 ---NVAPNVRSYNAKLRGVISE--NRMSEAVELIDEMKTSGIKPDVFTLNSLMKGFCNAG 282

Query: 382 DYAGFDKVLKEICKKGLSQNVGTY 453
           +     +   EI +  L     TY
Sbjct: 283 NLEEAKRWYSEIARNELPPVRATY 306


>ref|XP_002518584.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223542429|gb|EEF43971.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 377

 Score = 99.4 bits (246), Expect = 5e-19
 Identities = 53/148 (35%), Positives = 85/148 (57%)
 Frame = +1

Query: 10  SEGFLIRLIGLYSEAGMVDQAVRVFENIPSLAGQRSERSLCALLSAFLDNGCIERLQDAF 189
           +E F IRLI LY +AGM+D A R+F+ +P L   R+ RS  ALLSA +D+G  +++Q   
Sbjct: 89  NEQFTIRLISLYGKAGMLDHAHRLFDEMPDLKCTRTVRSFNALLSACIDSGKFDKVQGFL 148

Query: 190 SRSVEEYGVAPGIASYNIYLKALCSSSANKVDEALALFDQMHDKGIEPDISCYNTLLDGY 369
                + G+ P + S+NI +K  C      +D  + +  +M  +GIEPD+  +NTLL+G+
Sbjct: 149 RDFPVKLGITPDVVSFNIVIKGYC--EIGNLDSGVLVLCEMEKRGIEPDLITFNTLLNGF 206

Query: 370 SKKGDYAGFDKVLKEICKKGLSQNVGTY 453
              G +   +K+   +  K +  NV +Y
Sbjct: 207 YGNGRFVDGEKIWTLMESKNVVPNVRSY 234