BLASTX nr result
ID: Zingiber25_contig00028161
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00028161
(317 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001055281.1| Os05g0353300 [Oryza sativa Japonica Group] g... 168 8e-40
ref|XP_004962393.1| PREDICTED: pentatricopeptide repeat-containi... 166 3e-39
ref|NP_001183368.1| uncharacterized protein LOC100501779 [Zea ma... 166 3e-39
gb|ESW18802.1| hypothetical protein PHAVU_006G071400g [Phaseolus... 162 4e-38
ref|XP_003551233.1| PREDICTED: pentatricopeptide repeat-containi... 161 7e-38
ref|XP_002521193.1| conserved hypothetical protein [Ricinus comm... 161 9e-38
ref|XP_003568652.1| PREDICTED: pentatricopeptide repeat-containi... 160 1e-37
ref|XP_002313976.1| ubiquitin family protein [Populus trichocarp... 160 1e-37
ref|XP_002278434.1| PREDICTED: pentatricopeptide repeat-containi... 160 1e-37
ref|XP_006348674.1| PREDICTED: pentatricopeptide repeat-containi... 159 4e-37
ref|XP_004239038.1| PREDICTED: pentatricopeptide repeat-containi... 159 4e-37
gb|EOY34562.1| Pentatricopeptide repeat-containing protein [Theo... 157 1e-36
gb|EMJ06247.1| hypothetical protein PRUPE_ppa004609mg [Prunus pe... 157 1e-36
dbj|BAJ88994.1| predicted protein [Hordeum vulgare subsp. vulgare] 157 2e-36
gb|EXB37964.1| hypothetical protein L484_011688 [Morus notabilis] 156 3e-36
ref|XP_003538312.1| PREDICTED: pentatricopeptide repeat-containi... 156 3e-36
ref|XP_004500294.1| PREDICTED: pentatricopeptide repeat-containi... 155 5e-36
ref|XP_004168796.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 153 3e-35
ref|XP_004143220.1| PREDICTED: uncharacterized protein LOC101207... 153 3e-35
ref|XP_004296059.1| PREDICTED: uncharacterized protein LOC101292... 152 6e-35
>ref|NP_001055281.1| Os05g0353300 [Oryza sativa Japonica Group]
gi|55168009|gb|AAV43877.1| unknown protein [Oryza sativa
Japonica Group] gi|113578832|dbj|BAF17195.1|
Os05g0353300 [Oryza sativa Japonica Group]
Length = 488
Score = 168 bits (425), Expect = 8e-40
Identities = 76/103 (73%), Positives = 89/103 (86%)
Frame = +2
Query: 2 YFAQDGRDSYCALEVFDWLRKENRVDAETMELMVSIACGWMERLIGGEHEVGDVVALLNE 181
YFAQ+GRD+YCALEVFDWLR+ NRVD ETMELM +IACGW+ERL+GG +V DV ALL E
Sbjct: 100 YFAQEGRDAYCALEVFDWLRRANRVDGETMELMAAIACGWIERLVGGGGDVADVAALLGE 159
Query: 182 MDCVGLDPGFSMVEKVVSLYWEKGKKNEAVAFVKDVLRRGGVG 310
MDCVGL PGFS+VEK V+LYW++G + AV FV+DVLRRGGVG
Sbjct: 160 MDCVGLRPGFSLVEKAVALYWDRGDRGSAVDFVRDVLRRGGVG 202
>ref|XP_004962393.1| PREDICTED: pentatricopeptide repeat-containing protein At2g30100,
chloroplastic-like [Setaria italica]
Length = 482
Score = 166 bits (420), Expect = 3e-39
Identities = 74/104 (71%), Positives = 90/104 (86%)
Frame = +2
Query: 2 YFAQDGRDSYCALEVFDWLRKENRVDAETMELMVSIACGWMERLIGGEHEVGDVVALLNE 181
YFAQ+GRD+YCALEVFDWLR+ NRVD ETMELM +IACGW+ERL+G +V DV ALL E
Sbjct: 97 YFAQEGRDAYCALEVFDWLRRANRVDGETMELMAAIACGWIERLVGAGGDVADVAALLGE 156
Query: 182 MDCVGLDPGFSMVEKVVSLYWEKGKKNEAVAFVKDVLRRGGVGS 313
MDCVGL PGFS+VEK V+LYW++G++ AV FV+DVLRRGG+G+
Sbjct: 157 MDCVGLRPGFSLVEKAVALYWDRGEREHAVEFVRDVLRRGGLGA 200
>ref|NP_001183368.1| uncharacterized protein LOC100501779 [Zea mays]
gi|238011044|gb|ACR36557.1| unknown [Zea mays]
gi|413945128|gb|AFW77777.1| hypothetical protein
ZEAMMB73_817695 [Zea mays]
Length = 490
Score = 166 bits (420), Expect = 3e-39
Identities = 75/104 (72%), Positives = 90/104 (86%)
Frame = +2
Query: 2 YFAQDGRDSYCALEVFDWLRKENRVDAETMELMVSIACGWMERLIGGEHEVGDVVALLNE 181
YFAQ+GRD+YCALEVFDWLR+ NRVD ETMELM +IACGW+ERL+G +V DV ALL E
Sbjct: 103 YFAQEGRDTYCALEVFDWLRRANRVDGETMELMAAIACGWIERLVGAGGDVADVAALLGE 162
Query: 182 MDCVGLDPGFSMVEKVVSLYWEKGKKNEAVAFVKDVLRRGGVGS 313
MDCVGL PGFS+VEK V+LYW++G+K AV FV+DVLRRGG+G+
Sbjct: 163 MDCVGLRPGFSLVEKAVALYWDRGEKELAVEFVRDVLRRGGLGA 206
>gb|ESW18802.1| hypothetical protein PHAVU_006G071400g [Phaseolus vulgaris]
Length = 510
Score = 162 bits (410), Expect = 4e-38
Identities = 75/100 (75%), Positives = 88/100 (88%)
Frame = +2
Query: 2 YFAQDGRDSYCALEVFDWLRKENRVDAETMELMVSIACGWMERLIGGEHEVGDVVALLNE 181
YF+QDGRDS+CALEVFDWLRKENRVD ETMELMVSI CGW+++LI +H VGDV+ LL +
Sbjct: 130 YFSQDGRDSWCALEVFDWLRKENRVDKETMELMVSIMCGWVKKLIQEQHGVGDVIDLLVD 189
Query: 182 MDCVGLDPGFSMVEKVVSLYWEKGKKNEAVAFVKDVLRRG 301
MDCVGL PGFSM+EKV+SLYWE G+K AV FV++VLRRG
Sbjct: 190 MDCVGLRPGFSMIEKVISLYWEMGEKEGAVLFVEEVLRRG 229
>ref|XP_003551233.1| PREDICTED: pentatricopeptide repeat-containing protein At2g30100,
chloroplastic-like [Glycine max]
Length = 508
Score = 161 bits (408), Expect = 7e-38
Identities = 75/100 (75%), Positives = 88/100 (88%)
Frame = +2
Query: 2 YFAQDGRDSYCALEVFDWLRKENRVDAETMELMVSIACGWMERLIGGEHEVGDVVALLNE 181
YF+QDGRDS+CALEVFDWLRKENRVD ETMELMV+I CGW+++LI +H VGDVV LL +
Sbjct: 128 YFSQDGRDSWCALEVFDWLRKENRVDKETMELMVAIMCGWVKKLIQQQHGVGDVVDLLVD 187
Query: 182 MDCVGLDPGFSMVEKVVSLYWEKGKKNEAVAFVKDVLRRG 301
MDCVGL PGFSM+EKV+SLYWE G+K AV FV++VLRRG
Sbjct: 188 MDCVGLRPGFSMIEKVISLYWEMGEKEGAVLFVEEVLRRG 227
>ref|XP_002521193.1| conserved hypothetical protein [Ricinus communis]
gi|223539607|gb|EEF41193.1| conserved hypothetical
protein [Ricinus communis]
Length = 499
Score = 161 bits (407), Expect = 9e-38
Identities = 73/99 (73%), Positives = 89/99 (89%)
Frame = +2
Query: 2 YFAQDGRDSYCALEVFDWLRKENRVDAETMELMVSIACGWMERLIGGEHEVGDVVALLNE 181
YF+Q+GRDS+CALEVF+WLRKENRVD ETMELMVSI C W+++LI GEHE+GDVV LL +
Sbjct: 119 YFSQEGRDSWCALEVFEWLRKENRVDKETMELMVSIMCSWIKKLIEGEHEIGDVVDLLVD 178
Query: 182 MDCVGLDPGFSMVEKVVSLYWEKGKKNEAVAFVKDVLRR 298
MDCVGL P FSM+EKV+SLYWE G+K ++V+FVK+VLRR
Sbjct: 179 MDCVGLKPSFSMIEKVISLYWEIGEKEKSVSFVKEVLRR 217
>ref|XP_003568652.1| PREDICTED: pentatricopeptide repeat-containing protein At2g30100,
chloroplastic-like [Brachypodium distachyon]
Length = 472
Score = 160 bits (406), Expect = 1e-37
Identities = 73/103 (70%), Positives = 87/103 (84%)
Frame = +2
Query: 2 YFAQDGRDSYCALEVFDWLRKENRVDAETMELMVSIACGWMERLIGGEHEVGDVVALLNE 181
YFAQ+GRD+YCALEVFDWLR+ NRVD ETMELM +IACGW+ERL+G +V DV ALL E
Sbjct: 92 YFAQEGRDAYCALEVFDWLRRANRVDGETMELMAAIACGWIERLVGAGGDVADVSALLGE 151
Query: 182 MDCVGLDPGFSMVEKVVSLYWEKGKKNEAVAFVKDVLRRGGVG 310
MDCVGL PGFS+VEK V+LYW++ ++ AV FV+DVLRRG VG
Sbjct: 152 MDCVGLRPGFSLVEKAVALYWDRSERARAVEFVRDVLRRGNVG 194
>ref|XP_002313976.1| ubiquitin family protein [Populus trichocarpa]
gi|222850384|gb|EEE87931.1| ubiquitin family protein
[Populus trichocarpa]
Length = 500
Score = 160 bits (406), Expect = 1e-37
Identities = 74/100 (74%), Positives = 88/100 (88%)
Frame = +2
Query: 2 YFAQDGRDSYCALEVFDWLRKENRVDAETMELMVSIACGWMERLIGGEHEVGDVVALLNE 181
YF+Q+GRDS+CALEVF+WLRKENRVD ETMELMVSI C W+++LI GE +VGDVV LL +
Sbjct: 120 YFSQEGRDSWCALEVFEWLRKENRVDKETMELMVSIMCSWVKKLIEGEQDVGDVVDLLVD 179
Query: 182 MDCVGLDPGFSMVEKVVSLYWEKGKKNEAVAFVKDVLRRG 301
MDCVGL P FSM+EKV+SLYW+ GKK AV+FVK+VLRRG
Sbjct: 180 MDCVGLKPSFSMIEKVISLYWDMGKKEGAVSFVKEVLRRG 219
>ref|XP_002278434.1| PREDICTED: pentatricopeptide repeat-containing protein At2g30100,
chloroplastic [Vitis vinifera]
Length = 511
Score = 160 bits (406), Expect = 1e-37
Identities = 74/99 (74%), Positives = 88/99 (88%)
Frame = +2
Query: 2 YFAQDGRDSYCALEVFDWLRKENRVDAETMELMVSIACGWMERLIGGEHEVGDVVALLNE 181
YF+Q+GRDS+CALEVF+WLRKENRVD ETMELMVSI C W+++LI GEH+VGDVV LL +
Sbjct: 131 YFSQEGRDSWCALEVFEWLRKENRVDKETMELMVSIMCSWVKKLIEGEHDVGDVVDLLVD 190
Query: 182 MDCVGLDPGFSMVEKVVSLYWEKGKKNEAVAFVKDVLRR 298
MDCVGL PGFSM+EKV+SLYWE +K +AV FVK+VLRR
Sbjct: 191 MDCVGLKPGFSMIEKVISLYWEMEEKEKAVLFVKEVLRR 229
>ref|XP_006348674.1| PREDICTED: pentatricopeptide repeat-containing protein At2g30100,
chloroplastic-like [Solanum tuberosum]
Length = 503
Score = 159 bits (402), Expect = 4e-37
Identities = 73/99 (73%), Positives = 88/99 (88%)
Frame = +2
Query: 2 YFAQDGRDSYCALEVFDWLRKENRVDAETMELMVSIACGWMERLIGGEHEVGDVVALLNE 181
YFAQ+GRDS+CALEVF+WLRKENRVD ETMELMVSI CGW+++LIG + E GDVV LL +
Sbjct: 123 YFAQEGRDSWCALEVFEWLRKENRVDKETMELMVSIMCGWVQKLIGSKSEAGDVVDLLVD 182
Query: 182 MDCVGLDPGFSMVEKVVSLYWEKGKKNEAVAFVKDVLRR 298
MDCVGL+P FSMVEKV+SLYW+ G++ AV+FVK+VLRR
Sbjct: 183 MDCVGLNPSFSMVEKVISLYWDAGEREGAVSFVKEVLRR 221
>ref|XP_004239038.1| PREDICTED: pentatricopeptide repeat-containing protein At2g30100,
chloroplastic-like [Solanum lycopersicum]
Length = 503
Score = 159 bits (402), Expect = 4e-37
Identities = 73/99 (73%), Positives = 88/99 (88%)
Frame = +2
Query: 2 YFAQDGRDSYCALEVFDWLRKENRVDAETMELMVSIACGWMERLIGGEHEVGDVVALLNE 181
YFAQ+GRDS+CALEVF+WLRKENRVD ETMELMVSI CGW+++LIG + E GDVV LL +
Sbjct: 123 YFAQEGRDSWCALEVFEWLRKENRVDKETMELMVSIMCGWVQKLIGSKSEAGDVVDLLVD 182
Query: 182 MDCVGLDPGFSMVEKVVSLYWEKGKKNEAVAFVKDVLRR 298
MDCVGL+P FSMVEKV+SLYW+ G++ AV+FVK+VLRR
Sbjct: 183 MDCVGLNPSFSMVEKVISLYWDAGEREGAVSFVKEVLRR 221
>gb|EOY34562.1| Pentatricopeptide repeat-containing protein [Theobroma cacao]
Length = 504
Score = 157 bits (398), Expect = 1e-36
Identities = 72/100 (72%), Positives = 88/100 (88%)
Frame = +2
Query: 2 YFAQDGRDSYCALEVFDWLRKENRVDAETMELMVSIACGWMERLIGGEHEVGDVVALLNE 181
YF+Q+GRDS+CALEVF+WL+KEN+VD ETMELMVSI C W+++LI GE +VGDVV LL +
Sbjct: 124 YFSQEGRDSWCALEVFEWLKKENKVDNETMELMVSIMCSWVKKLIEGEGDVGDVVDLLVD 183
Query: 182 MDCVGLDPGFSMVEKVVSLYWEKGKKNEAVAFVKDVLRRG 301
MDCVGL PGFSM+EKV+S+YWE KK+ AV FVK+VLRRG
Sbjct: 184 MDCVGLKPGFSMIEKVISMYWEMEKKDRAVVFVKEVLRRG 223
>gb|EMJ06247.1| hypothetical protein PRUPE_ppa004609mg [Prunus persica]
Length = 500
Score = 157 bits (398), Expect = 1e-36
Identities = 73/104 (70%), Positives = 90/104 (86%)
Frame = +2
Query: 2 YFAQDGRDSYCALEVFDWLRKENRVDAETMELMVSIACGWMERLIGGEHEVGDVVALLNE 181
YF+Q+GRDS+CALEVF+WLRKENRVD ETM+LMVSI C W+++LI EH++GDVV LL +
Sbjct: 119 YFSQEGRDSWCALEVFEWLRKENRVDKETMDLMVSIMCSWVKKLIQREHDIGDVVDLLVD 178
Query: 182 MDCVGLDPGFSMVEKVVSLYWEKGKKNEAVAFVKDVLRRGGVGS 313
MDCVGL P FSM+EKV+SLYWE G+K +AV FVK+VL+RG V S
Sbjct: 179 MDCVGLKPSFSMMEKVISLYWEMGEKEKAVLFVKEVLKRGIVYS 222
>dbj|BAJ88994.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 470
Score = 157 bits (396), Expect = 2e-36
Identities = 71/104 (68%), Positives = 87/104 (83%)
Frame = +2
Query: 2 YFAQDGRDSYCALEVFDWLRKENRVDAETMELMVSIACGWMERLIGGEHEVGDVVALLNE 181
YFAQ+GRD+YCALEVFDWLR+ +RVD ETMELM +IACGW+ERL+G +V DV ALL E
Sbjct: 90 YFAQEGRDAYCALEVFDWLRRADRVDGETMELMTAIACGWIERLVGAGGDVSDVSALLGE 149
Query: 182 MDCVGLDPGFSMVEKVVSLYWEKGKKNEAVAFVKDVLRRGGVGS 313
MDCVGL PGFS+VEK V+LYW++ ++ AV FV+DVLRRG V +
Sbjct: 150 MDCVGLRPGFSLVEKAVALYWDRSERARAVEFVRDVLRRGSVAT 193
>gb|EXB37964.1| hypothetical protein L484_011688 [Morus notabilis]
Length = 516
Score = 156 bits (394), Expect = 3e-36
Identities = 71/100 (71%), Positives = 87/100 (87%)
Frame = +2
Query: 2 YFAQDGRDSYCALEVFDWLRKENRVDAETMELMVSIACGWMERLIGGEHEVGDVVALLNE 181
YF+Q+GRDS+CALEVF+WLRKENRVD ETMELMV++ C W+++LI GEH+VGDVV LL +
Sbjct: 136 YFSQEGRDSWCALEVFEWLRKENRVDKETMELMVTLMCSWVKKLIEGEHDVGDVVDLLVD 195
Query: 182 MDCVGLDPGFSMVEKVVSLYWEKGKKNEAVAFVKDVLRRG 301
M CVGL PGFSM+E V+ LYWE G+K AV+FVK+VLRRG
Sbjct: 196 MACVGLRPGFSMMENVILLYWEMGEKGRAVSFVKEVLRRG 235
>ref|XP_003538312.1| PREDICTED: pentatricopeptide repeat-containing protein At2g30100,
chloroplastic-like [Glycine max]
Length = 510
Score = 156 bits (394), Expect = 3e-36
Identities = 75/101 (74%), Positives = 87/101 (86%), Gaps = 1/101 (0%)
Frame = +2
Query: 2 YFAQDGRDSYCALEVFDWLRKENRVDAETMELMVSIACGWMERLIGGEH-EVGDVVALLN 178
YF+QDGRDS+CALEVFDWLRKENRVD ETMELMV+I CGW+++LI H VGDVV LL
Sbjct: 129 YFSQDGRDSWCALEVFDWLRKENRVDKETMELMVAIMCGWVKKLIQEHHGVVGDVVDLLV 188
Query: 179 EMDCVGLDPGFSMVEKVVSLYWEKGKKNEAVAFVKDVLRRG 301
+MDCVGL PGFSM+EKV+SLYWE G+K AV FV++VLRRG
Sbjct: 189 DMDCVGLRPGFSMIEKVISLYWEMGEKEGAVLFVEEVLRRG 229
>ref|XP_004500294.1| PREDICTED: pentatricopeptide repeat-containing protein At2g30100,
chloroplastic-like [Cicer arietinum]
Length = 508
Score = 155 bits (392), Expect = 5e-36
Identities = 71/100 (71%), Positives = 88/100 (88%)
Frame = +2
Query: 2 YFAQDGRDSYCALEVFDWLRKENRVDAETMELMVSIACGWMERLIGGEHEVGDVVALLNE 181
YF+Q+GRDS+CALEVFDWLRKENRVD ETMELMV+I CGW+++LI +H V DV+ LL
Sbjct: 129 YFSQEGRDSWCALEVFDWLRKENRVDKETMELMVAIMCGWVKKLIMEKHGVDDVIDLLVN 188
Query: 182 MDCVGLDPGFSMVEKVVSLYWEKGKKNEAVAFVKDVLRRG 301
M+CVGL PGFSM+EKV+SLYWE G+K++AV FV++VLRRG
Sbjct: 189 MNCVGLRPGFSMIEKVISLYWEMGEKDDAVLFVEEVLRRG 228
>ref|XP_004168796.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g30100, chloroplastic-like [Cucumis sativus]
Length = 501
Score = 153 bits (386), Expect = 3e-35
Identities = 70/99 (70%), Positives = 85/99 (85%)
Frame = +2
Query: 2 YFAQDGRDSYCALEVFDWLRKENRVDAETMELMVSIACGWMERLIGGEHEVGDVVALLNE 181
YF+Q+GRDS+CALEVF+WL+KENRVD ETMELMVSI C W+++L+ G H VGDVV LL +
Sbjct: 121 YFSQEGRDSWCALEVFEWLQKENRVDKETMELMVSIMCSWIKKLVEGRHNVGDVVDLLVD 180
Query: 182 MDCVGLDPGFSMVEKVVSLYWEKGKKNEAVAFVKDVLRR 298
MDCVGL P FSM+EKV+SLYWE G+K +AV FVK+VL R
Sbjct: 181 MDCVGLKPHFSMIEKVISLYWEMGEKEKAVFFVKEVLGR 219
>ref|XP_004143220.1| PREDICTED: uncharacterized protein LOC101207176 [Cucumis sativus]
Length = 1290
Score = 153 bits (386), Expect = 3e-35
Identities = 70/99 (70%), Positives = 85/99 (85%)
Frame = +2
Query: 2 YFAQDGRDSYCALEVFDWLRKENRVDAETMELMVSIACGWMERLIGGEHEVGDVVALLNE 181
YF+Q+GRDS+CALEVF+WL+KENRVD ETMELMVSI C W+++L+ G H VGDVV LL +
Sbjct: 121 YFSQEGRDSWCALEVFEWLQKENRVDKETMELMVSIMCSWIKKLVEGRHNVGDVVDLLVD 180
Query: 182 MDCVGLDPGFSMVEKVVSLYWEKGKKNEAVAFVKDVLRR 298
MDCVGL P FSM+EKV+SLYWE G+K +AV FVK+VL R
Sbjct: 181 MDCVGLKPHFSMIEKVISLYWEMGEKEKAVFFVKEVLGR 219
>ref|XP_004296059.1| PREDICTED: uncharacterized protein LOC101292395 [Fragaria vesca
subsp. vesca]
Length = 1304
Score = 152 bits (383), Expect = 6e-35
Identities = 71/104 (68%), Positives = 88/104 (84%)
Frame = +2
Query: 2 YFAQDGRDSYCALEVFDWLRKENRVDAETMELMVSIACGWMERLIGGEHEVGDVVALLNE 181
YF+Q+GRDS+CALEVF+WLR+ENRVD ETMELMVSI CGW++RLI ++V DV+ LL +
Sbjct: 113 YFSQEGRDSWCALEVFEWLRRENRVDKETMELMVSIMCGWLKRLIEEGNDVADVIDLLVD 172
Query: 182 MDCVGLDPGFSMVEKVVSLYWEKGKKNEAVAFVKDVLRRGGVGS 313
+DCVGL P FSM+EKV+SLYWE G+K AV FVK+VL+RG V S
Sbjct: 173 VDCVGLKPSFSMMEKVISLYWEMGEKENAVLFVKEVLKRGIVYS 216