BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00027902
         (2387 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containi...   657   0.0  
emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]   657   0.0  
ref|XP_004304772.1| PREDICTED: pentatricopeptide repeat-containi...   653   0.0  
gb|EOY10909.1| Pentatricopeptide repeat (PPR-like) superfamily p...   650   0.0  
ref|XP_006361415.1| PREDICTED: pentatricopeptide repeat-containi...   633   e-178
ref|XP_006371094.1| hypothetical protein POPTR_0019s03630g [Popu...   630   e-178
ref|XP_004236781.1| PREDICTED: pentatricopeptide repeat-containi...   630   e-178
ref|XP_002521980.1| pentatricopeptide repeat-containing protein,...   630   e-178
gb|EXB93167.1| hypothetical protein L484_024505 [Morus notabilis]     628   e-177
ref|XP_006442665.1| hypothetical protein CICLE_v10019446mg [Citr...   615   e-173
ref|XP_006487702.1| PREDICTED: pentatricopeptide repeat-containi...   614   e-173
gb|EMJ06317.1| hypothetical protein PRUPE_ppa004835mg [Prunus pe...   612   e-172
ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containi...   610   e-172
ref|XP_002884468.1| pentatricopeptide repeat-containing protein ...   597   e-167
ref|XP_006296608.1| hypothetical protein CARUB_v10013258mg [Caps...   595   e-167
ref|NP_566237.1| pentatricopeptide repeat-containing protein [Ar...   595   e-167
ref|XP_003590960.1| Pentatricopeptide repeat-containing protein ...   591   e-166
dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]           591   e-166
ref|XP_003521773.1| PREDICTED: pentatricopeptide repeat-containi...   590   e-166
ref|XP_006857320.1| hypothetical protein AMTR_s00067p00076830 [A...   588   e-165

>ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
            chloroplastic-like [Vitis vinifera]
          Length = 582

 Score =  657 bits (1696), Expect = 0.0
 Identities = 323/525 (61%), Positives = 402/525 (76%)
 Frame = -3

Query: 2193 SAEAKATQPQTLDSKESHYMKLLNRSCKAGKFNESLYFLEYMVGKGYKLDVILCTKLIKG 2014
            SAEA+    Q+ D +E+H MKLLNRSCKAGKFNESLYFLE +V KGY  DVILCTKLIKG
Sbjct: 53   SAEARPAHLQSYDFRETHLMKLLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKG 112

Query: 2013 LCSSRSVDKAVRVMDILESHGEPDVFAYNALVSGFCKAGRIESAIEVLGRMKSRRCPPDI 1834
              + ++++KA RVM+ILESH EPDVFAYNA++SGFCK  RIE+A +VL RMK+R   PDI
Sbjct: 113  FFNFKNIEKASRVMEILESHTEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDI 172

Query: 1833 VTYNILIGCFCTRGKXXXXXXXXXXXXXDKCRPTVVTFTILIEAALLQGGIGDAMKFLDE 1654
            VTYNI+IG  C R K             D C PTV+T+TILIEA +++GGI +AMK L+E
Sbjct: 173  VTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEE 232

Query: 1653 MMSQGLQPDNYTYTAIIRGLCREGMVDAAYEFLKSLPSRGCDPDVMSYNVLLRGLLSYKR 1474
            M+++GL PD YTY AIIRG+C+EGMV+ A E + SL S+GC PDV+SYN+LLR  L+  +
Sbjct: 233  MLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGK 292

Query: 1473 WEDGEKVVGEMLETGVKPNTVTYSLLINSLCHEGKLDRAKQLLDDMISRGLKPDSYSYDP 1294
            W++GEK+V EM   G +PN VTYS+LI+SLC  G++D A  +L  MI + L PD+YSYDP
Sbjct: 293  WDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDP 352

Query: 1293 LISAYCKDGKLDQAIEFMNFMISNGFLPDIVNYNTILSALCKRGNVVHALEVLDKLAESG 1114
            LISA CK+G+LD AI  M++MISNG LPDIVNYNTIL+ALCK GN   ALE+ +KL   G
Sbjct: 353  LISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMG 412

Query: 1113 CSPNVSSYNVVIGGLWNNGNRSRALDMVEEMIDKGINPDEVTYNLLISCLCRDGMVNEAI 934
            C PNVSSYN +I  LW+ G+RSRAL MV  MI KG++PDE+TYN LISCLCRDG+V EAI
Sbjct: 413  CPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAI 472

Query: 933  GLMRDMERSGLQPIVITYNTVLLGLCKVHKIDMAINVLAEMVDKGCHTNETTYIILIEGI 754
            GL+ DME+SG +P VI+YN VLLGLCKV +ID AI + AEM++KGC  NETTYI+LIEGI
Sbjct: 473  GLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGI 532

Query: 753  AYARHRAVAEELAKDLAMRNVFSEDSLKRLNRNFPKLNLFREIPN 619
             +A  R  A ELA  L  R+V S+DS KRLN+ FP L++++E+ N
Sbjct: 533  GFAGWRTEAMELANSLFSRDVISQDSFKRLNKTFPMLDVYKELSN 577


>emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
          Length = 592

 Score =  657 bits (1696), Expect = 0.0
 Identities = 323/525 (61%), Positives = 403/525 (76%)
 Frame = -3

Query: 2193 SAEAKATQPQTLDSKESHYMKLLNRSCKAGKFNESLYFLEYMVGKGYKLDVILCTKLIKG 2014
            SAEA+    Q+ D +E+H MKLLNRSCKAGKFNESLYFLE +V KGY  DVILCTKLIKG
Sbjct: 63   SAEARPAHLQSYDFRETHLMKLLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKG 122

Query: 2013 LCSSRSVDKAVRVMDILESHGEPDVFAYNALVSGFCKAGRIESAIEVLGRMKSRRCPPDI 1834
              + ++++KA RVM+ILESH EPDVFAYNA++SGFCK  +IE+A +VL RMK+R   PDI
Sbjct: 123  FFNFKNIEKASRVMEILESHTEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDI 182

Query: 1833 VTYNILIGCFCTRGKXXXXXXXXXXXXXDKCRPTVVTFTILIEAALLQGGIGDAMKFLDE 1654
            VTYNI+IG  C R K             D C PTV+T+TILIEA +++GGI +AMK L+E
Sbjct: 183  VTYNIMIGSLCNRRKLGLALTVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEE 242

Query: 1653 MMSQGLQPDNYTYTAIIRGLCREGMVDAAYEFLKSLPSRGCDPDVMSYNVLLRGLLSYKR 1474
            M+++GL PD YTY AIIRG+C+EGMV+ A E + SL S+GC+PDV+SYN+LLR  L+  +
Sbjct: 243  MLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGK 302

Query: 1473 WEDGEKVVGEMLETGVKPNTVTYSLLINSLCHEGKLDRAKQLLDDMISRGLKPDSYSYDP 1294
            W++GEK+V EM   G +PN VTYS+LI+SLC  G++D A  +L  MI + L PD+YSYDP
Sbjct: 303  WDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDP 362

Query: 1293 LISAYCKDGKLDQAIEFMNFMISNGFLPDIVNYNTILSALCKRGNVVHALEVLDKLAESG 1114
            LISA CK+G+LD AI  M++MISNG LPDIVNYNTIL+ALCK GN   ALE+ +KL   G
Sbjct: 363  LISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMG 422

Query: 1113 CSPNVSSYNVVIGGLWNNGNRSRALDMVEEMIDKGINPDEVTYNLLISCLCRDGMVNEAI 934
            C PNVSSYN +I  LW+ G+RSRAL MV  MI KGI+PDE+TYN LISCLCRDG+V EAI
Sbjct: 423  CPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAI 482

Query: 933  GLMRDMERSGLQPIVITYNTVLLGLCKVHKIDMAINVLAEMVDKGCHTNETTYIILIEGI 754
            GL+ DME+SG +P VI+YN VLLGLCKV +ID AI + AEM++KGC  NETTYI+LIEGI
Sbjct: 483  GLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGI 542

Query: 753  AYARHRAVAEELAKDLAMRNVFSEDSLKRLNRNFPKLNLFREIPN 619
             +A  R  A ELA  L  R+V S+DS KRLN+ FP L++++E+ N
Sbjct: 543  GFAGWRTEAMELANSLFSRDVISQDSFKRLNKTFPMLDVYKELSN 587


>ref|XP_004304772.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
            chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 586

 Score =  653 bits (1684), Expect = 0.0
 Identities = 317/523 (60%), Positives = 399/523 (76%)
 Frame = -3

Query: 2193 SAEAKATQPQTLDSKESHYMKLLNRSCKAGKFNESLYFLEYMVGKGYKLDVILCTKLIKG 2014
            SAE K+TQ Q  D K++H MK+LNRSCKAG++NE++YFLE MV KGYK DVILCTKLIKG
Sbjct: 57   SAEPKSTQLQNYDFKDTHLMKVLNRSCKAGQYNEAIYFLELMVNKGYKPDVILCTKLIKG 116

Query: 2013 LCSSRSVDKAVRVMDILESHGEPDVFAYNALVSGFCKAGRIESAIEVLGRMKSRRCPPDI 1834
              +SR+++KA+RVM ILE +GEPD+FAYNAL+SGFCKA RIESA +VL RMKS+   PD+
Sbjct: 117  FFNSRNIEKAIRVMQILEQYGEPDLFAYNALISGFCKANRIESANKVLDRMKSQGFKPDV 176

Query: 1833 VTYNILIGCFCTRGKXXXXXXXXXXXXXDKCRPTVVTFTILIEAALLQGGIGDAMKFLDE 1654
            VTYNI+IG  C+RGK             D C+PTV+T+TILIEA +L GGI +AMK LDE
Sbjct: 177  VTYNIMIGSLCSRGKLGLALQVMDRLVRDNCKPTVITYTILIEAIILDGGINEAMKLLDE 236

Query: 1653 MMSQGLQPDNYTYTAIIRGLCREGMVDAAYEFLKSLPSRGCDPDVMSYNVLLRGLLSYKR 1474
            M+S+GL+PD YTY AI+RG+CREGM+D A+EF+K   ++GC P+V+SYN+LLR LL+  +
Sbjct: 237  MLSRGLKPDMYTYNAIVRGMCREGMLDRAFEFVKCFDAKGCAPNVISYNILLRALLNRGK 296

Query: 1473 WEDGEKVVGEMLETGVKPNTVTYSLLINSLCHEGKLDRAKQLLDDMISRGLKPDSYSYDP 1294
            WE+GE +V  M   G +PN VTYS+LI++LC +GK++    +L  M  +GL PD+YSYDP
Sbjct: 297  WEEGENLVANMCARGCEPNVVTYSILISTLCRDGKVEDGMNVLKIMKEKGLTPDAYSYDP 356

Query: 1293 LISAYCKDGKLDQAIEFMNFMISNGFLPDIVNYNTILSALCKRGNVVHALEVLDKLAESG 1114
            LIS +CK+G+LD AIE ++ MIS+G LPDIVNYNT+L+ALCK G+   ALE+ + L E G
Sbjct: 357  LISCFCKEGRLDLAIELLDCMISDGCLPDIVNYNTVLAALCKNGSADQALEIFENLGEVG 416

Query: 1113 CSPNVSSYNVVIGGLWNNGNRSRALDMVEEMIDKGINPDEVTYNLLISCLCRDGMVNEAI 934
            C PNVSSYN +   LWN G+R RAL MV +M+ KGI PDE+TYN LISCLCRDGMVNEAI
Sbjct: 417  CPPNVSSYNTMFSALWNCGDRVRALGMVSDMVSKGIEPDEITYNSLISCLCRDGMVNEAI 476

Query: 933  GLMRDMERSGLQPIVITYNTVLLGLCKVHKIDMAINVLAEMVDKGCHTNETTYIILIEGI 754
            GL+ DME  G QP VITYN VLLGL K  +I  AI V   MV+KGC  NETTYI+LIEGI
Sbjct: 477  GLLVDMEAGGFQPTVITYNIVLLGLSKARRIVDAIEVFTAMVEKGCRPNETTYILLIEGI 536

Query: 753  AYARHRAVAEELAKDLAMRNVFSEDSLKRLNRNFPKLNLFREI 625
             +A  RA A ELAK +   +   EDS KRL+R FP L++++E+
Sbjct: 537  GFAGWRAEAMELAKSVYSLSAICEDSFKRLSRTFPMLDVYKEL 579


>gb|EOY10909.1| Pentatricopeptide repeat (PPR-like) superfamily protein [Theobroma
            cacao]
          Length = 586

 Score =  650 bits (1678), Expect = 0.0
 Identities = 316/522 (60%), Positives = 404/522 (77%)
 Frame = -3

Query: 2193 SAEAKATQPQTLDSKESHYMKLLNRSCKAGKFNESLYFLEYMVGKGYKLDVILCTKLIKG 2014
            SAE + T   + D KE+H MKLLNRSCKAGK+NE+ YFLE MVGKGYK DV+LCTK+IKG
Sbjct: 57   SAETRPTHLLSFDFKETHLMKLLNRSCKAGKYNEAFYFLECMVGKGYKPDVVLCTKMIKG 116

Query: 2013 LCSSRSVDKAVRVMDILESHGEPDVFAYNALVSGFCKAGRIESAIEVLGRMKSRRCPPDI 1834
              + R+V+KA RV++ILE +GEPDVFAYNA++SGFCK  R++ A +VL RM+SR   PD+
Sbjct: 117  FFNGRNVEKATRVIEILEKYGEPDVFAYNAIISGFCKMNRLDFANKVLDRMRSRGFSPDV 176

Query: 1833 VTYNILIGCFCTRGKXXXXXXXXXXXXXDKCRPTVVTFTILIEAALLQGGIGDAMKFLDE 1654
            VTYNI+IG FC+RGK             D C+P+V+T+TILIEA +LQG I +AMK LDE
Sbjct: 177  VTYNIMIGSFCSRGKLDSAYKVINQLLKDNCKPSVITYTILIEATMLQGEINEAMKLLDE 236

Query: 1653 MMSQGLQPDNYTYTAIIRGLCREGMVDAAYEFLKSLPSRGCDPDVMSYNVLLRGLLSYKR 1474
            M+S+GL+PD +TY AIIRG+C++GMV+ A++F++SL +RGC PDV+SYN+LLR LL+  +
Sbjct: 237  MLSKGLRPDMFTYNAIIRGMCKDGMVNRAFKFVRSLKARGCQPDVISYNILLRVLLNQGK 296

Query: 1473 WEDGEKVVGEMLETGVKPNTVTYSLLINSLCHEGKLDRAKQLLDDMISRGLKPDSYSYDP 1294
            W +GEK+V EM+  G +PN VTYS+LI+SLC EGKL+ A  +L  M  RGL PD+YSYDP
Sbjct: 297  WAEGEKLVTEMVSRGCEPNVVTYSILISSLCREGKLEEAVNVLKMMKERGLTPDAYSYDP 356

Query: 1293 LISAYCKDGKLDQAIEFMNFMISNGFLPDIVNYNTILSALCKRGNVVHALEVLDKLAESG 1114
            LISA+CK+G+LD AIEF++ MIS+G LPDIVNYNT+L+ LCK G    ALE+ +KL E G
Sbjct: 357  LISAFCKEGRLDLAIEFLDCMISDGCLPDIVNYNTVLATLCKNGKAEQALEIFEKLREVG 416

Query: 1113 CSPNVSSYNVVIGGLWNNGNRSRALDMVEEMIDKGINPDEVTYNLLISCLCRDGMVNEAI 934
            C PNVSSYN +   LW++G++ +AL+M+ EM+ K I PDE+TYN LISCLCRDGMV+EAI
Sbjct: 417  CPPNVSSYNTMFSALWSSGDKVKALEMISEMLSKRIGPDEITYNSLISCLCRDGMVDEAI 476

Query: 933  GLMRDMERSGLQPIVITYNTVLLGLCKVHKIDMAINVLAEMVDKGCHTNETTYIILIEGI 754
             L+ DM  SG+ P VI+YN VLLGLCKVH+I+ AI VLA MVDK C  NETTYI+LIEGI
Sbjct: 477  ELLVDMGCSGIPPTVISYNIVLLGLCKVHRINDAIEVLAAMVDKRCQPNETTYILLIEGI 536

Query: 753  AYARHRAVAEELAKDLAMRNVFSEDSLKRLNRNFPKLNLFRE 628
             +A  R+ A ELA  L      S+DS KRLNR FP L++++E
Sbjct: 537  GFAGWRSEAMELANALFRMEAISKDSFKRLNRTFPLLDVYKE 578


>ref|XP_006361415.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
            chloroplastic-like [Solanum tuberosum]
          Length = 583

 Score =  633 bits (1632), Expect = e-178
 Identities = 307/502 (61%), Positives = 389/502 (77%), Gaps = 2/502 (0%)
 Frame = -3

Query: 2151 KESHYMKLLNRSCKAGKFNESLYFLEYMVGKGYKLDVILCTKLIKGLCSSRSVDKAVRVM 1972
            + +H MK+LN SCK GK++E+LY LE  +  GYK DVILCTKLIKG C+S++ DK V+VM
Sbjct: 61   RPTHDMKVLNWSCKVGKYDETLYLLECKLKSGYKPDVILCTKLIKGFCNSKNSDKGVKVM 120

Query: 1971 DILESHGEPDVFAYNALVSGFCKAGRIESAIEVLGRMKSRRCPPDIVTYNILIGCFCTRG 1792
             ILE  GEPDVFAYNAL+SGFCK  +IE A +VL RMK+R  PPD VTYNILIG  C RG
Sbjct: 121  QILEQFGEPDVFAYNALISGFCKMNKIEEANKVLNRMKARGFPPDSVTYNILIGSLCDRG 180

Query: 1791 KXXXXXXXXXXXXXDK-CRPTVVTFTILIEAALLQGGIGDAMKFLDEMMSQGLQPDNYTY 1615
            K             +  C+PTV+T+TILIEA +L+GGI +AMK LDEM+S+GLQPD YTY
Sbjct: 181  KLGSALKLLDQLKEENNCKPTVITYTILIEATILEGGIHEAMKLLDEMLSRGLQPDMYTY 240

Query: 1614 TAIIRGLCREGMVDAAYEFLKSLPSRGCDPDVMSYNVLLRGLLSYK-RWEDGEKVVGEML 1438
             AIIRG+CRE M+D AYEF++SLPS+GC PDV+SYN+LLR LL +K +W DGEK++ EML
Sbjct: 241  NAIIRGMCREKMMDQAYEFVRSLPSKGCKPDVISYNILLRALLHHKGKWSDGEKLMNEML 300

Query: 1437 ETGVKPNTVTYSLLINSLCHEGKLDRAKQLLDDMISRGLKPDSYSYDPLISAYCKDGKLD 1258
              G +PN VTYS+L+++LC +GKLD A  LL  M+ +GL PD+++YDPLISA+CK G+LD
Sbjct: 301  SAGCEPNVVTYSILMSALCRDGKLDEAINLLKIMMDKGLTPDTFTYDPLISAFCKGGRLD 360

Query: 1257 QAIEFMNFMISNGFLPDIVNYNTILSALCKRGNVVHALEVLDKLAESGCSPNVSSYNVVI 1078
             AI+F+++MISNG LPDIVNYNTILS +CK+G    A+EV +KLAE GC P+VS+YN ++
Sbjct: 361  LAIKFLDYMISNGCLPDIVNYNTILSTMCKKGKADEAMEVFEKLAEIGCPPDVSTYNTLM 420

Query: 1077 GGLWNNGNRSRALDMVEEMIDKGINPDEVTYNLLISCLCRDGMVNEAIGLMRDMERSGLQ 898
              LWNNG R+RAL MV EMI+KG++PDE+TYN LISCLCRDGMVNEA+ L+ DME +G  
Sbjct: 421  SALWNNGGRARALKMVSEMIEKGVDPDEITYNALISCLCRDGMVNEALDLLGDMEGNGFP 480

Query: 897  PIVITYNTVLLGLCKVHKIDMAINVLAEMVDKGCHTNETTYIILIEGIAYARHRAVAEEL 718
            P VITYN +LLGLCK H++  AI VLAEMV+KG   NETTYI+LIEGI ++  R  A E+
Sbjct: 481  PTVITYNILLLGLCKAHRVVEAIEVLAEMVEKGRRPNETTYILLIEGIGFSGRRVQAMEM 540

Query: 717  AKDLAMRNVFSEDSLKRLNRNF 652
            A  +  +N  S++SL+RL + F
Sbjct: 541  ASAIYHKNAISKESLQRLRKTF 562


>ref|XP_006371094.1| hypothetical protein POPTR_0019s03630g [Populus trichocarpa]
            gi|550316702|gb|ERP48891.1| hypothetical protein
            POPTR_0019s03630g [Populus trichocarpa]
          Length = 586

 Score =  630 bits (1626), Expect = e-178
 Identities = 303/522 (58%), Positives = 396/522 (75%), Gaps = 1/522 (0%)
 Frame = -3

Query: 2187 EAKATQPQTLDSKESHYMKLLNRSCKAGKFNESLYFLEYMVGKGYKLDVILCTKLIKGLC 2008
            E K T   + D KE+H MKLLNRSCKAGK NESLYFLE MV KGY+ DVI+CTKLIKG  
Sbjct: 60   ETKPTHVLSYDFKETHLMKLLNRSCKAGKCNESLYFLECMVAKGYQPDVIMCTKLIKGFF 119

Query: 2007 SSRSVDKAVRVMDILESHGEPDVFAYNALVSGFCKAGRIESAIEVLGRMKSRRCPPDIVT 1828
            +SR+++KA RVM+ILE HGEPDVFAYNA++SGFCKA RIESA +VL RMK +    D+VT
Sbjct: 120  NSRNIEKATRVMEILEKHGEPDVFAYNAVISGFCKANRIESAKKVLDRMKRKGFSQDVVT 179

Query: 1827 YNILIGCFCTRGKXXXXXXXXXXXXXDK-CRPTVVTFTILIEAALLQGGIGDAMKFLDEM 1651
            YNI+IG FC++GK             D  C+PT++T+TILIEA +L+GGI + +K LDEM
Sbjct: 180  YNIMIGTFCSKGKIDLALKVFEELLKDNNCKPTLITYTILIEAHILEGGIDEGLKLLDEM 239

Query: 1650 MSQGLQPDNYTYTAIIRGLCREGMVDAAYEFLKSLPSRGCDPDVMSYNVLLRGLLSYKRW 1471
            +S+GL+PD +TY  I+RGL +EG V+ A+E +++L SRGC PDV++YN+LLR LL   +W
Sbjct: 240  LSRGLEPDTFTYNVIVRGLGKEGKVNQAFELVRTLNSRGCKPDVITYNILLRALLDQGKW 299

Query: 1470 EDGEKVVGEMLETGVKPNTVTYSLLINSLCHEGKLDRAKQLLDDMISRGLKPDSYSYDPL 1291
             +GEK++ EM   G +PN VTYS+LI+SLC +GK++ +  L+  M  +GL PD+Y YDPL
Sbjct: 300  YEGEKLMDEMFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPL 359

Query: 1290 ISAYCKDGKLDQAIEFMNFMISNGFLPDIVNYNTILSALCKRGNVVHALEVLDKLAESGC 1111
            I+A+C++GKLD AI+F+++MIS+GFLPDIVNYNTI++ALCK GN  HA+E+  KL E GC
Sbjct: 360  IAAFCREGKLDMAIKFLDYMISDGFLPDIVNYNTIMAALCKNGNSDHAVEIFGKLEEVGC 419

Query: 1110 SPNVSSYNVVIGGLWNNGNRSRALDMVEEMIDKGINPDEVTYNLLISCLCRDGMVNEAIG 931
             PNVSSYN ++  LW +G+R RAL M+ +M+  GI+PD +TYN LISCLCRDGMV+EAIG
Sbjct: 420  PPNVSSYNTMLSALWGSGDRYRALGMISQMLSTGIDPDGITYNSLISCLCRDGMVDEAIG 479

Query: 930  LMRDMERSGLQPIVITYNTVLLGLCKVHKIDMAINVLAEMVDKGCHTNETTYIILIEGIA 751
            L+ DM     QP +++YN VLLGLCKVH+ID AI VL  M++ GC  NETTY +LIEGI 
Sbjct: 480  LLADMLSGRFQPNIVSYNIVLLGLCKVHRIDDAIEVLTAMIENGCQPNETTYTLLIEGIG 539

Query: 750  YARHRAVAEELAKDLAMRNVFSEDSLKRLNRNFPKLNLFREI 625
            ++  RA A ELA  L   N  SE S KRLN+ FP L++++++
Sbjct: 540  FSGSRAQAMELANSLYSMNAISEGSYKRLNKVFPLLDVYKDL 581


>ref|XP_004236781.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
            chloroplastic-like [Solanum lycopersicum]
          Length = 575

 Score =  630 bits (1626), Expect = e-178
 Identities = 307/504 (60%), Positives = 389/504 (77%), Gaps = 2/504 (0%)
 Frame = -3

Query: 2157 DSKESHYMKLLNRSCKAGKFNESLYFLEYMVGKGYKLDVILCTKLIKGLCSSRSVDKAVR 1978
            +++ SH MK+LN SCK GK++E+LY LE  V  GYK DVILCTKLIKG  +S++ DK V+
Sbjct: 54   ENRGSHDMKVLNWSCKVGKYDETLYLLECKVKSGYKPDVILCTKLIKGFFNSKNSDKGVK 113

Query: 1977 VMDILESHGEPDVFAYNALVSGFCKAGRIESAIEVLGRMKSRRCPPDIVTYNILIGCFCT 1798
            VM ILE  GEPDVFAYNALVSGFCK  +IE A +VL RMK+   PPD VTYNILIG  C 
Sbjct: 114  VMQILEQFGEPDVFAYNALVSGFCKMNKIEEANKVLNRMKTHGFPPDSVTYNILIGSLCD 173

Query: 1797 RGKXXXXXXXXXXXXXD-KCRPTVVTFTILIEAALLQGGIGDAMKFLDEMMSQGLQPDNY 1621
            RGK             +  C+PTV+T+TILIEA +L+GGI +AMK LDEM+S GLQPD Y
Sbjct: 174  RGKLGSALMLLDQLKEEHNCKPTVITYTILIEATILEGGIHEAMKLLDEMLSIGLQPDMY 233

Query: 1620 TYTAIIRGLCREGMVDAAYEFLKSLPSRGCDPDVMSYNVLLRGLLSYK-RWEDGEKVVGE 1444
            TY AIIRG+CRE M+D AYEF++SLPS+GC PDV+SYN+LLR LL ++ +W DGEK++ E
Sbjct: 234  TYNAIIRGMCREKMMDQAYEFVRSLPSKGCKPDVISYNILLRALLHHRGKWSDGEKLMNE 293

Query: 1443 MLETGVKPNTVTYSLLINSLCHEGKLDRAKQLLDDMISRGLKPDSYSYDPLISAYCKDGK 1264
            ML  G +PN VTYS+L+++LC +GKLD A  LL  M+ +GL PD+++YDPLISA+CK G+
Sbjct: 294  MLCAGCEPNVVTYSILMSALCRDGKLDEAINLLKIMVDKGLTPDTFTYDPLISAFCKGGR 353

Query: 1263 LDQAIEFMNFMISNGFLPDIVNYNTILSALCKRGNVVHALEVLDKLAESGCSPNVSSYNV 1084
            LD AI+F+++MI+NG LPDIVNYNTILS +CK+G    A+EV +KLAE GC P+VS+YN 
Sbjct: 354  LDMAIKFLDYMITNGCLPDIVNYNTILSTMCKKGKADEAMEVFEKLAEIGCPPDVSTYNT 413

Query: 1083 VIGGLWNNGNRSRALDMVEEMIDKGINPDEVTYNLLISCLCRDGMVNEAIGLMRDMERSG 904
            ++  LWNNG R+RAL MV EMI+KG++PDE+TYN LISCLCRDGMVNEA+ L+ DME +G
Sbjct: 414  LMSALWNNGGRARALKMVSEMIEKGVDPDEITYNALISCLCRDGMVNEALDLLGDMEGNG 473

Query: 903  LQPIVITYNTVLLGLCKVHKIDMAINVLAEMVDKGCHTNETTYIILIEGIAYARHRAVAE 724
              P VITYN +LLGLCK H++  AI VLAEMV+KGC  NETTYI+LIEGI ++  R  A 
Sbjct: 474  FPPTVITYNILLLGLCKAHRVVEAIEVLAEMVEKGCRPNETTYILLIEGIGFSGRRVQAM 533

Query: 723  ELAKDLAMRNVFSEDSLKRLNRNF 652
            E+A  +  +N  S++SL+RL + F
Sbjct: 534  EMATAIYHKNAISKESLQRLRKTF 557


>ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223538784|gb|EEF40384.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 584

 Score =  630 bits (1625), Expect = e-178
 Identities = 308/533 (57%), Positives = 402/533 (75%), Gaps = 1/533 (0%)
 Frame = -3

Query: 2220 RIRSYQAM-ASAEAKATQPQTLDSKESHYMKLLNRSCKAGKFNESLYFLEYMVGKGYKLD 2044
            ++R+ Q +  SAE + T   + D KE H MKLLNRSC+AGK+NESLYFLE MV KGY  D
Sbjct: 44   KVRNPQKVRVSAETRQTHVLSFDFKEVHLMKLLNRSCRAGKYNESLYFLECMVDKGYTPD 103

Query: 2043 VILCTKLIKGLCSSRSVDKAVRVMDILESHGEPDVFAYNALVSGFCKAGRIESAIEVLGR 1864
            VILCTKLIKG  +SR++ KA RVM+ILE +G+PDVFAYNAL+SGF KA ++E+A  VL R
Sbjct: 104  VILCTKLIKGFFNSRNIGKATRVMEILERYGKPDVFAYNALISGFIKANQLENANRVLDR 163

Query: 1863 MKSRRCPPDIVTYNILIGCFCTRGKXXXXXXXXXXXXXDKCRPTVVTFTILIEAALLQGG 1684
            MKSR   PD+VTYNI+IG FC+RGK             D C PTV+T+TILIEA +L GG
Sbjct: 164  MKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVITYTILIEATILDGG 223

Query: 1683 IGDAMKFLDEMMSQGLQPDNYTYTAIIRGLCREGMVDAAYEFLKSLPSRGCDPDVMSYNV 1504
            I  AMK LDEM+S+GL+PD  TY AIIRG+C+E MVD A+E L+SL SRGC PD+++YN+
Sbjct: 224  IDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNI 283

Query: 1503 LLRGLLSYKRWEDGEKVVGEMLETGVKPNTVTYSLLINSLCHEGKLDRAKQLLDDMISRG 1324
            LLR LLS  +W +GEK++ EM+  G KPN VT+S+LI +LC +GK++ A  LL  M  +G
Sbjct: 284  LLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKG 343

Query: 1323 LKPDSYSYDPLISAYCKDGKLDQAIEFMNFMISNGFLPDIVNYNTILSALCKRGNVVHAL 1144
            LKPD+Y YDPLI+ +C++G+LD A EF+ +MIS+G LPDIVNYNTI++ LC+ G    AL
Sbjct: 344  LKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQAL 403

Query: 1143 EVLDKLAESGCSPNVSSYNVVIGGLWNNGNRSRALDMVEEMIDKGINPDEVTYNLLISCL 964
            EV +KL E GC PNVSSYN +   LW++G+R RAL+M+ +++++GI+PDE+TYN LISCL
Sbjct: 404  EVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCL 463

Query: 963  CRDGMVNEAIGLMRDMERSGLQPIVITYNTVLLGLCKVHKIDMAINVLAEMVDKGCHTNE 784
            CRDGMV+EAI L+ DM+    +P V++YN +LLGLCKV++ + AI VLA M +KGC  NE
Sbjct: 464  CRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNE 523

Query: 783  TTYIILIEGIAYARHRAVAEELAKDLAMRNVFSEDSLKRLNRNFPKLNLFREI 625
            TTYI+LIEGI ++  RA A ELA  L   N  SEDS  RLN+ FP L++++++
Sbjct: 524  TTYILLIEGIGFSGLRAEAMELANSLHGMNAISEDSFNRLNKTFPLLDVYKDL 576


>gb|EXB93167.1| hypothetical protein L484_024505 [Morus notabilis]
          Length = 587

 Score =  628 bits (1620), Expect = e-177
 Identities = 300/524 (57%), Positives = 398/524 (75%), Gaps = 1/524 (0%)
 Frame = -3

Query: 2193 SAEAKATQPQT-LDSKESHYMKLLNRSCKAGKFNESLYFLEYMVGKGYKLDVILCTKLIK 2017
            S E K+   Q+  D  ESH +K++NRSCK+GK+NE+LYFLE MV KG+K DVILCTK+++
Sbjct: 57   SVETKSPNSQSNSDFSESHLLKVINRSCKSGKYNEALYFLELMVSKGFKPDVILCTKVMR 116

Query: 2016 GLCSSRSVDKAVRVMDILESHGEPDVFAYNALVSGFCKAGRIESAIEVLGRMKSRRCPPD 1837
            G  +SR++ KA+RVM+ILE HGEPD+F+YNA++SGFCKA R+E A +VL RM+ +   PD
Sbjct: 117  GFFNSRNIPKAIRVMEILEKHGEPDLFSYNAMISGFCKANRVELANKVLDRMRVQGFSPD 176

Query: 1836 IVTYNILIGCFCTRGKXXXXXXXXXXXXXDKCRPTVVTFTILIEAALLQGGIGDAMKFLD 1657
             +TYNI+IG  C+RGK             D C+P+V+T+TILIEA + +GG+  AM+ L+
Sbjct: 177  TITYNIMIGSLCSRGKVDMAFKVLDELLRDNCKPSVITYTILIEATISEGGVDKAMEVLE 236

Query: 1656 EMMSQGLQPDNYTYTAIIRGLCREGMVDAAYEFLKSLPSRGCDPDVMSYNVLLRGLLSYK 1477
            EM+S+GL PD +TY AI+RG+CREGM+D A+EF++SL ++GC P+V+SYN+LLR LL+  
Sbjct: 237  EMLSRGLLPDMFTYNAIVRGMCREGMLDRAFEFVRSLEAKGCSPNVISYNILLRALLNRG 296

Query: 1476 RWEDGEKVVGEMLETGVKPNTVTYSLLINSLCHEGKLDRAKQLLDDMISRGLKPDSYSYD 1297
            +W DGEK++ +M+  G +PN VTYS+LI++LC +GK++ A  +L  M  +G+ PD+YSYD
Sbjct: 297  KWSDGEKILSDMVSRGCEPNVVTYSILISTLCRDGKVEDAVNVLKAMKEKGITPDAYSYD 356

Query: 1296 PLISAYCKDGKLDQAIEFMNFMISNGFLPDIVNYNTILSALCKRGNVVHALEVLDKLAES 1117
            PLISA+CK+G+LD AIEFM++MIS+G LPDIVNYNTIL+ALCK GN  HALE+ +KL E 
Sbjct: 357  PLISAFCKEGRLDLAIEFMDYMISDGSLPDIVNYNTILAALCKNGNADHALEIFEKLGEV 416

Query: 1116 GCSPNVSSYNVVIGGLWNNGNRSRALDMVEEMIDKGINPDEVTYNLLISCLCRDGMVNEA 937
            GC P VSSYN +   LWN G R +AL+M+ EM+ K INPDE+TYN LISCLCR+GMVNEA
Sbjct: 417  GCPPTVSSYNTMFSALWNCGERIKALEMISEMVSKRINPDEITYNSLISCLCREGMVNEA 476

Query: 936  IGLMRDMERSGLQPIVITYNTVLLGLCKVHKIDMAINVLAEMVDKGCHTNETTYIILIEG 757
            IGL+ DME  G +  VI+YN VLLGLCK  +ID AI +LA MV+KGC  NETTY +LIEG
Sbjct: 477  IGLLIDMEAGGFKLSVISYNIVLLGLCKARRIDDAIELLAAMVEKGCRPNETTYTLLIEG 536

Query: 756  IAYARHRAVAEELAKDLAMRNVFSEDSLKRLNRNFPKLNLFREI 625
            I +A  R  A  LA  L      SE S KRLN+ FP L++++E+
Sbjct: 537  IGFAGWRVEAMGLANLLFDIEAISEHSFKRLNKTFPMLDVYKEL 580


>ref|XP_006442665.1| hypothetical protein CICLE_v10019446mg [Citrus clementina]
            gi|557544927|gb|ESR55905.1| hypothetical protein
            CICLE_v10019446mg [Citrus clementina]
          Length = 583

 Score =  615 bits (1586), Expect = e-173
 Identities = 301/544 (55%), Positives = 398/544 (73%), Gaps = 4/544 (0%)
 Frame = -3

Query: 2223 IRIRSYQAMASAEAKATQPQT----LDSKESHYMKLLNRSCKAGKFNESLYFLEYMVGKG 2056
            I  +S + +  + +  T+P T     D KE+ +MKL+ RS +AGKF+ESLYF+E MV  G
Sbjct: 40   INPKSNERVRVSSSAETRPNTHLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANG 99

Query: 2055 YKLDVILCTKLIKGLCSSRSVDKAVRVMDILESHGEPDVFAYNALVSGFCKAGRIESAIE 1876
             K DV++CTKLIK     R  +KAVRVM+ILE +GEPDVFAYNAL+SGFCKA +IE A +
Sbjct: 100  CKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANK 159

Query: 1875 VLGRMKSRRCPPDIVTYNILIGCFCTRGKXXXXXXXXXXXXXDKCRPTVVTFTILIEAAL 1696
            VL R++SR   PD+VTYNI+IG  C+RG              D C+PTV+T+TILI+A +
Sbjct: 160  VLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESGFKVFDQLLRDNCKPTVITYTILIQATM 219

Query: 1695 LQGGIGDAMKFLDEMMSQGLQPDNYTYTAIIRGLCREGMVDAAYEFLKSLPSRGCDPDVM 1516
            L+G    AMK LDEM ++GL PD +T  AIIRG+C++GMV  A++F++SL SRGC PDV+
Sbjct: 220  LEGQTDKAMKLLDEMFARGLIPDMFTNNAIIRGMCKKGMVGQAFQFVRSLESRGCQPDVI 279

Query: 1515 SYNVLLRGLLSYKRWEDGEKVVGEMLETGVKPNTVTYSLLINSLCHEGKLDRAKQLLDDM 1336
            SYN+LLR LL+  +WE+GEK++ EM+  G++PN VTYS+LI+SLC +GK + A  +L   
Sbjct: 280  SYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAA 339

Query: 1335 ISRGLKPDSYSYDPLISAYCKDGKLDQAIEFMNFMISNGFLPDIVNYNTILSALCKRGNV 1156
              +GL PD+YSYDPLISAYCKDG+LD AIEF+++MIS+G LPDIVNYNTIL+A CK GN 
Sbjct: 340  KEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNA 399

Query: 1155 VHALEVLDKLAESGCSPNVSSYNVVIGGLWNNGNRSRALDMVEEMIDKGINPDEVTYNLL 976
              ALE+ +KL++ GC PNVSSYN +   LW++G++ RAL M+ EM+ KGI PDE+TYN L
Sbjct: 400  DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 459

Query: 975  ISCLCRDGMVNEAIGLMRDMERSGLQPIVITYNTVLLGLCKVHKIDMAINVLAEMVDKGC 796
            ISCLCRDGMV+EA+GL+ DME +  +P V++YN ++LG CK  +I+ AI VLA M +KGC
Sbjct: 460  ISCLCRDGMVDEAVGLLVDMESTRFRPTVVSYNIIILGFCKTRRINEAIEVLAAMFEKGC 519

Query: 795  HTNETTYIILIEGIAYARHRAVAEELAKDLAMRNVFSEDSLKRLNRNFPKLNLFREIPN* 616
              NETTY++LIEGI Y   RA A ELA  L   +  S D+ KRLNR FP L++++EI + 
Sbjct: 520  KPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTFKRLNRTFPLLDVYKEISHL 579

Query: 615  GVND 604
               D
Sbjct: 580  ATKD 583


>ref|XP_006487702.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
            chloroplastic-like [Citrus sinensis]
          Length = 583

 Score =  614 bits (1583), Expect = e-173
 Identities = 300/544 (55%), Positives = 399/544 (73%), Gaps = 4/544 (0%)
 Frame = -3

Query: 2223 IRIRSYQAMASAEAKATQPQT----LDSKESHYMKLLNRSCKAGKFNESLYFLEYMVGKG 2056
            I  +S + +  + +  T+P T     D KE+ +MKL+ +S +AGKF+ESLYF+E MV  G
Sbjct: 40   INPKSNERVRVSSSAETRPNTHLLSFDVKETQFMKLIKKSFRAGKFDESLYFIESMVANG 99

Query: 2055 YKLDVILCTKLIKGLCSSRSVDKAVRVMDILESHGEPDVFAYNALVSGFCKAGRIESAIE 1876
             K DV++CTKLIK     R  +KAVRVM+ILE +GEPDVFAYNAL+SGFCKA +IE A +
Sbjct: 100  CKPDVVMCTKLIKKFFQERKSNKAVRVMEILEKYGEPDVFAYNALISGFCKANQIELANK 159

Query: 1875 VLGRMKSRRCPPDIVTYNILIGCFCTRGKXXXXXXXXXXXXXDKCRPTVVTFTILIEAAL 1696
            VL R++SR   PD+VTYNI+IG  C+RG              D C+PTV+T+TILI+A +
Sbjct: 160  VLDRLRSRGFSPDVVTYNIMIGSLCSRGMIESAFKVFDQLLRDNCKPTVITYTILIQATM 219

Query: 1695 LQGGIGDAMKFLDEMMSQGLQPDNYTYTAIIRGLCREGMVDAAYEFLKSLPSRGCDPDVM 1516
            L+G    AMK LDEM+++GL PD +T  AIIRG+C++GMV  A++F++SL SRGC PDV+
Sbjct: 220  LEGQTDKAMKLLDEMLARGLIPDMFTNNAIIRGMCKKGMVGQAFQFVRSLESRGCQPDVI 279

Query: 1515 SYNVLLRGLLSYKRWEDGEKVVGEMLETGVKPNTVTYSLLINSLCHEGKLDRAKQLLDDM 1336
            SYN+LLR LL+  +WE+GEK++ EM+  G++PN VTYS+LI+SLC +GK + A  +L   
Sbjct: 280  SYNMLLRTLLNMGKWEEGEKLMTEMISRGLEPNVVTYSILISSLCRDGKTEDAVDVLRAA 339

Query: 1335 ISRGLKPDSYSYDPLISAYCKDGKLDQAIEFMNFMISNGFLPDIVNYNTILSALCKRGNV 1156
              +GL PD+YSYDPLISAYCKDG+LD AIEF+++MIS+G LPDIVNYNTIL+A CK GN 
Sbjct: 340  KEKGLTPDAYSYDPLISAYCKDGRLDLAIEFLDYMISDGCLPDIVNYNTILAAFCKNGNA 399

Query: 1155 VHALEVLDKLAESGCSPNVSSYNVVIGGLWNNGNRSRALDMVEEMIDKGINPDEVTYNLL 976
              ALE+ +KL++ GC PNVSSYN +   LW++G++ RAL M+ EM+ KGI PDE+TYN L
Sbjct: 400  DQALEIFEKLSDVGCPPNVSSYNTMFSALWSSGDKIRALGMISEMLSKGIEPDEITYNSL 459

Query: 975  ISCLCRDGMVNEAIGLMRDMERSGLQPIVITYNTVLLGLCKVHKIDMAINVLAEMVDKGC 796
            ISCLCRDGMV+EA+GL+ DME +  +P VI+YN ++LG CK  +I+ +I VLA M +KGC
Sbjct: 460  ISCLCRDGMVDEAVGLLVDMESTRFRPTVISYNIIILGFCKTRRINESIEVLAAMFEKGC 519

Query: 795  HTNETTYIILIEGIAYARHRAVAEELAKDLAMRNVFSEDSLKRLNRNFPKLNLFREIPN* 616
              NETTY++LIEGI Y   RA A ELA  L   +  S D+ KRLNR FP L++++EI + 
Sbjct: 520  KPNETTYVLLIEGIGYGGWRAEAMELANALVSMHAISRDTFKRLNRTFPLLDVYKEISHL 579

Query: 615  GVND 604
               D
Sbjct: 580  ATKD 583


>gb|EMJ06317.1| hypothetical protein PRUPE_ppa004835mg [Prunus persica]
          Length = 489

 Score =  612 bits (1579), Expect = e-172
 Identities = 295/482 (61%), Positives = 373/482 (77%)
 Frame = -3

Query: 2070 MVGKGYKLDVILCTKLIKGLCSSRSVDKAVRVMDILESHGEPDVFAYNALVSGFCKAGRI 1891
            MV KGYK DVILCTKLIKG  +SR+++KA+RVM ILE +GEPD+F+YNAL+SGFCKA RI
Sbjct: 1    MVNKGYKPDVILCTKLIKGFFNSRNIEKAIRVMQILEKYGEPDLFSYNALISGFCKANRI 60

Query: 1890 ESAIEVLGRMKSRRCPPDIVTYNILIGCFCTRGKXXXXXXXXXXXXXDKCRPTVVTFTIL 1711
            ESA +VL RM+S+   PD+VTYNI+IG  C+RGK             D CRPTV+T+TIL
Sbjct: 61   ESANKVLDRMRSQGFSPDVVTYNIMIGSLCSRGKLGLALKVMDQLVKDNCRPTVITYTIL 120

Query: 1710 IEAALLQGGIGDAMKFLDEMMSQGLQPDNYTYTAIIRGLCREGMVDAAYEFLKSLPSRGC 1531
            IEA ++ GGI +AMK LDEM+S+GL+PD YTY A+IRG+CREGM+D A++F++SL S+GC
Sbjct: 121  IEATIVDGGIDEAMKLLDEMLSRGLKPDMYTYNAVIRGMCREGMLDRAFQFVRSLDSKGC 180

Query: 1530 DPDVMSYNVLLRGLLSYKRWEDGEKVVGEMLETGVKPNTVTYSLLINSLCHEGKLDRAKQ 1351
             P+V+SYN+LLR LL+  +WE+GEK+V  M   G +PN VTYS+LI++LC +GK++ A  
Sbjct: 181  PPNVISYNILLRALLNRGKWEEGEKLVTNMCSRGCEPNVVTYSILISTLCRDGKVEDAVN 240

Query: 1350 LLDDMISRGLKPDSYSYDPLISAYCKDGKLDQAIEFMNFMISNGFLPDIVNYNTILSALC 1171
            +L  M  +GL PD+YSYDPL+SA+CK+G+LD AIEF+++MIS+G LPDIVNYNTIL+ALC
Sbjct: 241  VLKIMKKKGLTPDAYSYDPLVSAFCKEGRLDLAIEFLDYMISDGCLPDIVNYNTILAALC 300

Query: 1170 KRGNVVHALEVLDKLAESGCSPNVSSYNVVIGGLWNNGNRSRALDMVEEMIDKGINPDEV 991
            K G    AL++ + L E GC PNVSSYN +   LWN G+R RAL MV EM+ KGI PDE+
Sbjct: 301  KSGKADQALQIFENLGEVGCPPNVSSYNTMFSALWNCGDRVRALGMVSEMVGKGIKPDEI 360

Query: 990  TYNLLISCLCRDGMVNEAIGLMRDMERSGLQPIVITYNTVLLGLCKVHKIDMAINVLAEM 811
            TYN LISCLCRDGMV+EAIGL+ DME  G QP VI+YN +LLGLCK  ++  AI VL EM
Sbjct: 361  TYNSLISCLCRDGMVDEAIGLLVDMETGGFQPTVISYNIILLGLCKTRRVVDAIQVLTEM 420

Query: 810  VDKGCHTNETTYIILIEGIAYARHRAVAEELAKDLAMRNVFSEDSLKRLNRNFPKLNLFR 631
            V+KGC  NETTYI+LIEGI +A  RA A ELA  +      SEDS KRLNR FP L++F+
Sbjct: 421  VEKGCRPNETTYILLIEGIGFAGWRAEAMELANSVFSLRAISEDSFKRLNRTFPMLDVFK 480

Query: 630  EI 625
            E+
Sbjct: 481  EL 482



 Score =  240 bits (612), Expect = 2e-60
 Identities = 126/409 (30%), Positives = 215/409 (52%), Gaps = 36/409 (8%)
 Frame = -3

Query: 2139 YMKLLNRSCKAGKFNESLYFLEYMVGKGYKLDVILCTKLIKGLCS--------------- 2005
            Y  L++  CKA +   +   L+ M  +G+  DV+    +I  LCS               
Sbjct: 47   YNALISGFCKANRIESANKVLDRMRSQGFSPDVVTYNIMIGSLCSRGKLGLALKVMDQLV 106

Query: 2004 --------------------SRSVDKAVRVMDILESHG-EPDVFAYNALVSGFCKAGRIE 1888
                                   +D+A++++D + S G +PD++ YNA++ G C+ G ++
Sbjct: 107  KDNCRPTVITYTILIEATIVDGGIDEAMKLLDEMLSRGLKPDMYTYNAVIRGMCREGMLD 166

Query: 1887 SAIEVLGRMKSRRCPPDIVTYNILIGCFCTRGKXXXXXXXXXXXXXDKCRPTVVTFTILI 1708
             A + +  + S+ CPP++++YNIL+     RGK               C P VVT++ILI
Sbjct: 167  RAFQFVRSLDSKGCPPNVISYNILLRALLNRGKWEEGEKLVTNMCSRGCEPNVVTYSILI 226

Query: 1707 EAALLQGGIGDAMKFLDEMMSQGLQPDNYTYTAIIRGLCREGMVDAAYEFLKSLPSRGCD 1528
                  G + DA+  L  M  +GL PD Y+Y  ++   C+EG +D A EFL  + S GC 
Sbjct: 227  STLCRDGKVEDAVNVLKIMKKKGLTPDAYSYDPLVSAFCKEGRLDLAIEFLDYMISDGCL 286

Query: 1527 PDVMSYNVLLRGLLSYKRWEDGEKVVGEMLETGVKPNTVTYSLLINSLCHEGKLDRAKQL 1348
            PD+++YN +L  L    + +   ++   + E G  PN  +Y+ + ++L + G   RA  +
Sbjct: 287  PDIVNYNTILAALCKSGKADQALQIFENLGEVGCPPNVSSYNTMFSALWNCGDRVRALGM 346

Query: 1347 LDDMISRGLKPDSYSYDPLISAYCKDGKLDQAIEFMNFMISNGFLPDIVNYNTILSALCK 1168
            + +M+ +G+KPD  +Y+ LIS  C+DG +D+AI  +  M + GF P +++YN IL  LCK
Sbjct: 347  VSEMVGKGIKPDEITYNSLISCLCRDGMVDEAIGLLVDMETGGFQPTVISYNIILLGLCK 406

Query: 1167 RGNVVHALEVLDKLAESGCSPNVSSYNVVIGGLWNNGNRSRALDMVEEM 1021
               VV A++VL ++ E GC PN ++Y ++I G+   G R+ A+++   +
Sbjct: 407  TRRVVDAIQVLTEMVEKGCRPNETTYILLIEGIGFAGWRAEAMELANSV 455



 Score = 67.8 bits (164), Expect = 2e-08
 Identities = 40/112 (35%), Positives = 59/112 (52%), Gaps = 1/112 (0%)
 Frame = -3

Query: 2145 SHYMKLLNRSCKAGKFNESLYFLEYMVGKGYKLDVILCTKLIKGLCSSRSVDKAVRVMDI 1966
            S Y  + +     G    +L  +  MVGKG K D I    LI  LC    VD+A+ ++  
Sbjct: 325  SSYNTMFSALWNCGDRVRALGMVSEMVGKGIKPDEITYNSLISCLCRDGMVDEAIGLLVD 384

Query: 1965 LESHG-EPDVFAYNALVSGFCKAGRIESAIEVLGRMKSRRCPPDIVTYNILI 1813
            +E+ G +P V +YN ++ G CK  R+  AI+VL  M  + C P+  TY +LI
Sbjct: 385  METGGFQPTVISYNIILLGLCKTRRVVDAIQVLTEMVEKGCRPNETTYILLI 436



 Score = 64.7 bits (156), Expect = 2e-07
 Identities = 41/167 (24%), Positives = 77/167 (46%), Gaps = 1/167 (0%)
 Frame = -3

Query: 2142 HYMKLLNRSCKAGKFNESLYFLEYMVGKGYKLDVILCTKLIKGLCSSRSVDKAVRVMDIL 1963
            +Y  +L   CK+GK +++L   E +   G   +V     +   L +     +A+ ++  +
Sbjct: 291  NYNTILAALCKSGKADQALQIFENLGEVGCPPNVSSYNTMFSALWNCGDRVRALGMVSEM 350

Query: 1962 ESHG-EPDVFAYNALVSGFCKAGRIESAIEVLGRMKSRRCPPDIVTYNILIGCFCTRGKX 1786
               G +PD   YN+L+S  C+ G ++ AI +L  M++    P +++YNI++   C   + 
Sbjct: 351  VGKGIKPDEITYNSLISCLCRDGMVDEAIGLLVDMETGGFQPTVISYNIILLGLCKTRRV 410

Query: 1785 XXXXXXXXXXXXDKCRPTVVTFTILIEAALLQGGIGDAMKFLDEMMS 1645
                          CRP   T+ +LIE     G   +AM+  + + S
Sbjct: 411  VDAIQVLTEMVEKGCRPNETTYILLIEGIGFAGWRAEAMELANSVFS 457


>ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
            chloroplastic-like [Cucumis sativus]
          Length = 581

 Score =  610 bits (1573), Expect = e-172
 Identities = 298/543 (54%), Positives = 406/543 (74%)
 Frame = -3

Query: 2259 RNSSGRRCRGFTIRIRSYQAMASAEAKATQPQTLDSKESHYMKLLNRSCKAGKFNESLYF 2080
            R+ S   CR F+ +       +SAE +      LD++++H MKLLNRSC+AGK NESLYF
Sbjct: 26   RSDSIPACR-FSNKTHLRNVTSSAEFRQPHFPNLDNRDAHLMKLLNRSCRAGKHNESLYF 84

Query: 2079 LEYMVGKGYKLDVILCTKLIKGLCSSRSVDKAVRVMDILESHGEPDVFAYNALVSGFCKA 1900
            LE +V KG+K DV+LCTKLIKG  +SR++ KA+RVM+ILE++G+PDV++YNA++SGF KA
Sbjct: 85   LESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVMEILETYGDPDVYSYNAMISGFSKA 144

Query: 1899 GRIESAIEVLGRMKSRRCPPDIVTYNILIGCFCTRGKXXXXXXXXXXXXXDKCRPTVVTF 1720
             +I+SA +V  RM+SR   PD+VTYNI+IG  C+RGK             D C+P+V+T+
Sbjct: 145  NQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDELLKDGCKPSVITY 204

Query: 1719 TILIEAALLQGGIGDAMKFLDEMMSQGLQPDNYTYTAIIRGLCREGMVDAAYEFLKSLPS 1540
            TILIEA +L+G I +A++  DE++S+GL+PD YTY AIIRG+C+EGM D A +F++ L +
Sbjct: 205  TILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICKEGMEDRALDFVRHLSA 264

Query: 1539 RGCDPDVMSYNVLLRGLLSYKRWEDGEKVVGEMLETGVKPNTVTYSLLINSLCHEGKLDR 1360
            RGC+PDV+SYN+LLR  L+  RWEDGE+++ +M+ +G +PN VT+S+LI+S C EG++  
Sbjct: 265  RGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILISSFCREGRVRE 324

Query: 1359 AKQLLDDMISRGLKPDSYSYDPLISAYCKDGKLDQAIEFMNFMISNGFLPDIVNYNTILS 1180
            A  +L+ M  +GL PDSYSYDPLISA+CK+G+LD AIE++  M+S+G LPDIVNYNTIL+
Sbjct: 325  AVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILA 384

Query: 1179 ALCKRGNVVHALEVLDKLAESGCSPNVSSYNVVIGGLWNNGNRSRALDMVEEMIDKGINP 1000
             LCK G    AL+V +KL E GC P V +YN +   LW+ GN+ +AL+M+ EMI KGI+P
Sbjct: 385  TLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKIKALEMISEMIRKGIDP 444

Query: 999  DEVTYNLLISCLCRDGMVNEAIGLMRDMERSGLQPIVITYNTVLLGLCKVHKIDMAINVL 820
            DE+TYN LISCLCRDG+V+EAIGL+ DME +  QP VI++N VLLG+CK H++   I +L
Sbjct: 445  DEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVISFNIVLLGMCKAHRVFEGIELL 504

Query: 819  AEMVDKGCHTNETTYIILIEGIAYARHRAVAEELAKDLAMRNVFSEDSLKRLNRNFPKLN 640
              MV+KGC  NET+Y++LIEGIAYA  RA A ELA  L    V S DS KRLN+ FP L+
Sbjct: 505  ITMVEKGCLPNETSYVLLIEGIAYAGWRAEAMELANSLYRLGVISGDSSKRLNKTFPMLD 564

Query: 639  LFR 631
            +++
Sbjct: 565  VYK 567


>ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297330308|gb|EFH60727.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 598

 Score =  597 bits (1538), Expect = e-167
 Identities = 291/542 (53%), Positives = 387/542 (71%)
 Frame = -3

Query: 2256 NSSGRRCRGFTIRIRSYQAMASAEAKATQPQTLDSKESHYMKLLNRSCKAGKFNESLYFL 2077
            +SSG R     ++  +  A    E +    Q+L  +++  +K+ +RSC++G + ESL+ L
Sbjct: 53   SSSGAR----NLQATTTDAAIPTERRQQHSQSLGFRDTQMLKIFHRSCRSGNYIESLHLL 108

Query: 2076 EYMVGKGYKLDVILCTKLIKGLCSSRSVDKAVRVMDILESHGEPDVFAYNALVSGFCKAG 1897
            E MV KGY  DVILCTKLIKG  + R+V KAVRVM+ILE  G+PDVFAYNAL++GFCK  
Sbjct: 109  ETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFGQPDVFAYNALINGFCKMN 168

Query: 1896 RIESAIEVLGRMKSRRCPPDIVTYNILIGCFCTRGKXXXXXXXXXXXXXDKCRPTVVTFT 1717
            RI+ A  VL RM+S+   PD VTYNI+IG  C+RGK             D C+PTV+T+T
Sbjct: 169  RIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLLSDNCQPTVITYT 228

Query: 1716 ILIEAALLQGGIGDAMKFLDEMMSQGLQPDNYTYTAIIRGLCREGMVDAAYEFLKSLPSR 1537
            ILIEA +L+GG+ +A+K LDEM+S+GL+PD +TY  IIRG+C+EGMVD A+E +++L  +
Sbjct: 229  ILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELK 288

Query: 1536 GCDPDVMSYNVLLRGLLSYKRWEDGEKVVGEMLETGVKPNTVTYSLLINSLCHEGKLDRA 1357
            GC+PDV+SYN+LLR LL+  +WE+GEK++ +M      PN VTYS+LI +LC +GK++ A
Sbjct: 289  GCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEA 348

Query: 1356 KQLLDDMISRGLKPDSYSYDPLISAYCKDGKLDQAIEFMNFMISNGFLPDIVNYNTILSA 1177
              LL  M  +GL PD+YSYDPLI+A+C++G+LD AIEF+  MIS+G LPDIVNYNT+L+ 
Sbjct: 349  MNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLAT 408

Query: 1176 LCKRGNVVHALEVLDKLAESGCSPNVSSYNVVIGGLWNNGNRSRALDMVEEMIDKGINPD 997
            LCK G    ALE+  KL E GCSPN SSYN +   LW++G++ RAL M+ EM+  GI+PD
Sbjct: 409  LCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPD 468

Query: 996  EVTYNLLISCLCRDGMVNEAIGLMRDMERSGLQPIVITYNTVLLGLCKVHKIDMAINVLA 817
            E+TYN +ISCLCR+GMV++A  L+ DM      P V+TYN VLLG CK H+I+ AI+VL 
Sbjct: 469  EITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLD 528

Query: 816  EMVDKGCHTNETTYIILIEGIAYARHRAVAEELAKDLAMRNVFSEDSLKRLNRNFPKLNL 637
             MV  GC  NETTY +LIEGI +A +RA A ELA DL   N  SE S KRL+R FP LN+
Sbjct: 529  SMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRINAISEYSFKRLHRTFPLLNV 588

Query: 636  FR 631
             +
Sbjct: 589  LQ 590


>ref|XP_006296608.1| hypothetical protein CARUB_v10013258mg [Capsella rubella]
            gi|482565317|gb|EOA29506.1| hypothetical protein
            CARUB_v10013258mg [Capsella rubella]
          Length = 607

 Score =  595 bits (1533), Expect = e-167
 Identities = 284/515 (55%), Positives = 377/515 (73%)
 Frame = -3

Query: 2175 TQPQTLDSKESHYMKLLNRSCKAGKFNESLYFLEYMVGKGYKLDVILCTKLIKGLCSSRS 1996
            T   +L  +++  +K+ +RSC++G + ESL+ LE MV KGY  DVILCTKLIKG  + R+
Sbjct: 84   THSHSLGFRDTQMLKIFHRSCRSGNYIESLHLLESMVRKGYNPDVILCTKLIKGFFTLRN 143

Query: 1995 VDKAVRVMDILESHGEPDVFAYNALVSGFCKAGRIESAIEVLGRMKSRRCPPDIVTYNIL 1816
            + KAVRVM+ILE  G+PDVFAYNAL++GFCK  RI+ A  VL RM+S+   PD VTYNI+
Sbjct: 144  IPKAVRVMEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKGFSPDTVTYNIM 203

Query: 1815 IGCFCTRGKXXXXXXXXXXXXXDKCRPTVVTFTILIEAALLQGGIGDAMKFLDEMMSQGL 1636
            IG  C+RGK             D C+PTV+T+TILIEA +L+GG+ +A+K LDEM+S+GL
Sbjct: 204  IGSLCSRGKLVLALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGL 263

Query: 1635 QPDNYTYTAIIRGLCREGMVDAAYEFLKSLPSRGCDPDVMSYNVLLRGLLSYKRWEDGEK 1456
            +PD +TY  IIRG+C+EGMVD A+E +++L  RGC+PDV+SYN+LLR LL+  +WE+GEK
Sbjct: 264  KPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELRGCEPDVISYNILLRALLNQGKWEEGEK 323

Query: 1455 VVGEMLETGVKPNTVTYSLLINSLCHEGKLDRAKQLLDDMISRGLKPDSYSYDPLISAYC 1276
            ++ +M      PN VTYS+LI +LC +GK++ A  LL  M  +GL PD+YSYDPLI+A+C
Sbjct: 324  LMTKMFSEKCDPNVVTYSILITTLCRDGKIEEALNLLKLMKEKGLSPDAYSYDPLIAAFC 383

Query: 1275 KDGKLDQAIEFMNFMISNGFLPDIVNYNTILSALCKRGNVVHALEVLDKLAESGCSPNVS 1096
            ++G+LD AIEF+  MIS+G LPDIVNYNT+L+ LCK G    ALE+  KL E GCSPN S
Sbjct: 384  REGRLDLAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSS 443

Query: 1095 SYNVVIGGLWNNGNRSRALDMVEEMIDKGINPDEVTYNLLISCLCRDGMVNEAIGLMRDM 916
            SYN +   LW++G++ RAL M+ EM+ +GI+PDE+TYN +ISCLCR+GMV+EA  L+ DM
Sbjct: 444  SYNTMFSALWSSGDKIRALHMISEMVSQGIDPDEITYNSMISCLCREGMVDEAFDLLVDM 503

Query: 915  ERSGLQPIVITYNTVLLGLCKVHKIDMAINVLAEMVDKGCHTNETTYIILIEGIAYARHR 736
                  P V+TYN VLLG CK H+I+ AI+VL  MV  GC  NE+TY +LIEGI +A +R
Sbjct: 504  RSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLESMVGNGCRPNESTYTVLIEGIGFAGYR 563

Query: 735  AVAEELAKDLAMRNVFSEDSLKRLNRNFPKLNLFR 631
            A A ELA DL   +  SE S KRL+R FP LN+ +
Sbjct: 564  AEAMELANDLVRIDAISEHSFKRLHRTFPLLNVLQ 598


>ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At3g04760, chloroplastic; Flags: Precursor
            gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein
            [Arabidopsis thaliana] gi|15810359|gb|AAL07067.1| unknown
            protein [Arabidopsis thaliana] gi|22136960|gb|AAM91709.1|
            unknown protein [Arabidopsis thaliana]
            gi|332640611|gb|AEE74132.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 602

 Score =  595 bits (1533), Expect = e-167
 Identities = 286/524 (54%), Positives = 379/524 (72%)
 Frame = -3

Query: 2202 AMASAEAKATQPQTLDSKESHYMKLLNRSCKAGKFNESLYFLEYMVGKGYKLDVILCTKL 2023
            A    E +    Q+L  +++  +K+ +RSC++G + ESL+ LE MV KGY  DVILCTKL
Sbjct: 71   ATLPTERRQQHSQSLGFRDTQMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKL 130

Query: 2022 IKGLCSSRSVDKAVRVMDILESHGEPDVFAYNALVSGFCKAGRIESAIEVLGRMKSRRCP 1843
            IKG  + R++ KAVRVM+ILE  G+PDVFAYNAL++GFCK  RI+ A  VL RM+S+   
Sbjct: 131  IKGFFTLRNIPKAVRVMEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFS 190

Query: 1842 PDIVTYNILIGCFCTRGKXXXXXXXXXXXXXDKCRPTVVTFTILIEAALLQGGIGDAMKF 1663
            PD VTYNI+IG  C+RGK             D C+PTV+T+TILIEA +L+GG+ +A+K 
Sbjct: 191  PDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKL 250

Query: 1662 LDEMMSQGLQPDNYTYTAIIRGLCREGMVDAAYEFLKSLPSRGCDPDVMSYNVLLRGLLS 1483
            +DEM+S+GL+PD +TY  IIRG+C+EGMVD A+E +++L  +GC+PDV+SYN+LLR LL+
Sbjct: 251  MDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLN 310

Query: 1482 YKRWEDGEKVVGEMLETGVKPNTVTYSLLINSLCHEGKLDRAKQLLDDMISRGLKPDSYS 1303
              +WE+GEK++ +M      PN VTYS+LI +LC +GK++ A  LL  M  +GL PD+YS
Sbjct: 311  QGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYS 370

Query: 1302 YDPLISAYCKDGKLDQAIEFMNFMISNGFLPDIVNYNTILSALCKRGNVVHALEVLDKLA 1123
            YDPLI+A+C++G+LD AIEF+  MIS+G LPDIVNYNT+L+ LCK G    ALE+  KL 
Sbjct: 371  YDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLG 430

Query: 1122 ESGCSPNVSSYNVVIGGLWNNGNRSRALDMVEEMIDKGINPDEVTYNLLISCLCRDGMVN 943
            E GCSPN SSYN +   LW++G++ RAL M+ EM+  GI+PDE+TYN +ISCLCR+GMV+
Sbjct: 431  EVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVD 490

Query: 942  EAIGLMRDMERSGLQPIVITYNTVLLGLCKVHKIDMAINVLAEMVDKGCHTNETTYIILI 763
            EA  L+ DM      P V+TYN VLLG CK H+I+ AINVL  MV  GC  NETTY +LI
Sbjct: 491  EAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLI 550

Query: 762  EGIAYARHRAVAEELAKDLAMRNVFSEDSLKRLNRNFPKLNLFR 631
            EGI +A +RA A ELA DL   +  SE S KRL+R FP LN+ +
Sbjct: 551  EGIGFAGYRAEAMELANDLVRIDAISEYSFKRLHRTFPLLNVLQ 594


>ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355480008|gb|AES61211.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 590

 Score =  591 bits (1523), Expect = e-166
 Identities = 289/523 (55%), Positives = 382/523 (73%), Gaps = 2/523 (0%)
 Frame = -3

Query: 2187 EAKATQ-PQTLDSKESHYMKLLNRSCKAGKFNESLYFLEYMVGKGYKLDVILCTKLIKGL 2011
            E K T+  Q  D +++++MK LNRSCK+ K++ESLYFL++MV +GYK DVILCTKLIKG 
Sbjct: 63   ETKPTKHDQDYDFRDTNFMKTLNRSCKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGF 122

Query: 2010 CSSRSVDKAVRVMDILESHGEPDVFAYNALVSGFCKAGRIESAIEVLGRMKSRRCPPDIV 1831
             + + ++KA++VM+ILE HG+PDVFAYNA++SGFCKA R++ A +VL RMK R   PD+V
Sbjct: 123  FNMKKIEKAIQVMEILEKHGKPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVV 182

Query: 1830 TYNILIGCFCTRGKXXXXXXXXXXXXXDKCRPTVVTFTILIEAALLQGGIGDAMKFLDEM 1651
            TYNILIG FC RG+             D C+PTV+T+TILIEA + QGGI +AMK LDEM
Sbjct: 183  TYNILIGNFCGRGRLDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEM 242

Query: 1650 MSQGLQPDNYTYTAIIRGLCREGMVDAAYEFLKSLPSRGCDPDVMSYNVLLRGLLSYKRW 1471
            +S+GL+PD YTY  ++ G+C+EGM+D A+EFL  +   GC   V +YN+LLR LL+  +W
Sbjct: 243  LSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKW 302

Query: 1470 EDGEKVVGEMLETGVKPNTVTYSLLINSLCHEGKLDRAKQLLDDMISRGLKPDSYSYDPL 1291
            E GEK++ +ML  G +PN +TYS LI +LC +GK+D AK +L  M  + L PD YSYDPL
Sbjct: 303  EYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPL 362

Query: 1290 ISAYCKDGKLDQAIEFMNFMISNGFLPDIVNYNTILSALCKRGNVVHALEVLDKLAESGC 1111
            ISA C++GK+D AIEF++ MIS G LPDI++YN+IL++LCK GN   AL + +KL E GC
Sbjct: 363  ISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGC 422

Query: 1110 SPNVSSYNVVIGGLWNNGNRSRALDMVEEMIDKGINPDEVTYNLLISCLCRDGMVNEAIG 931
             PN  SYN + G LW++G++ RAL M+ EM+  GI+PDE+TYN LISCLCRDG+V++AI 
Sbjct: 423  PPNAGSYNTLFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIE 482

Query: 930  LMRDM-ERSGLQPIVITYNTVLLGLCKVHKIDMAINVLAEMVDKGCHTNETTYIILIEGI 754
            L+ DM E    QP VI+YNTVLLGLCKV +I  AI VLA MV++GC  NETTY +LI+GI
Sbjct: 483  LLVDMFESEKCQPTVISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQGI 542

Query: 753  AYARHRAVAEELAKDLAMRNVFSEDSLKRLNRNFPKLNLFREI 625
             +A  R  A ELA  L   +  SEDS KR  + FP  +  +E+
Sbjct: 543  GFAGWRYDAMELANLLVNMDAISEDSFKRFQKIFPVFDAHKEL 585


>dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
          Length = 602

 Score =  591 bits (1523), Expect = e-166
 Identities = 285/524 (54%), Positives = 378/524 (72%)
 Frame = -3

Query: 2202 AMASAEAKATQPQTLDSKESHYMKLLNRSCKAGKFNESLYFLEYMVGKGYKLDVILCTKL 2023
            A    E +    Q+L  +++  +K+ +RSC++G + ESL+ LE MV KGY  DVILCTKL
Sbjct: 71   ATLPTERRQQHSQSLGFRDTQMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKL 130

Query: 2022 IKGLCSSRSVDKAVRVMDILESHGEPDVFAYNALVSGFCKAGRIESAIEVLGRMKSRRCP 1843
            IKG  + R++ KAVRVM+ILE  G+PDVFAYNAL++GFCK  RI+ A  VL RM+S+   
Sbjct: 131  IKGFFTLRNIPKAVRVMEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFS 190

Query: 1842 PDIVTYNILIGCFCTRGKXXXXXXXXXXXXXDKCRPTVVTFTILIEAALLQGGIGDAMKF 1663
            PD VTYNI+IG  C+RGK             D C+PTV+T+TILIEA +L+GG+ +A+K 
Sbjct: 191  PDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKL 250

Query: 1662 LDEMMSQGLQPDNYTYTAIIRGLCREGMVDAAYEFLKSLPSRGCDPDVMSYNVLLRGLLS 1483
            +DEM+S+GL+PD +TY  IIRG+C+EGMVD A+E +++L  +G +PDV+SYN+LLR LL+
Sbjct: 251  MDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLN 310

Query: 1482 YKRWEDGEKVVGEMLETGVKPNTVTYSLLINSLCHEGKLDRAKQLLDDMISRGLKPDSYS 1303
              +WE+GEK++ +M      PN VTYS+LI +LC +GK++ A  LL  M  +GL PD+YS
Sbjct: 311  QGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYS 370

Query: 1302 YDPLISAYCKDGKLDQAIEFMNFMISNGFLPDIVNYNTILSALCKRGNVVHALEVLDKLA 1123
            YDPLI+A+C++G+LD AIEF+  MIS+G LPDIVNYNT+L+ LCK G    ALE+  KL 
Sbjct: 371  YDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLG 430

Query: 1122 ESGCSPNVSSYNVVIGGLWNNGNRSRALDMVEEMIDKGINPDEVTYNLLISCLCRDGMVN 943
            E GCSPN SSYN +   LW++G++ RAL M+ EM+  GI+PDE+TYN +ISCLCR+GMV+
Sbjct: 431  EVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVD 490

Query: 942  EAIGLMRDMERSGLQPIVITYNTVLLGLCKVHKIDMAINVLAEMVDKGCHTNETTYIILI 763
            EA  L+ DM      P V+TYN VLLG CK H+I+ AINVL  MV  GC  NETTY +LI
Sbjct: 491  EAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLI 550

Query: 762  EGIAYARHRAVAEELAKDLAMRNVFSEDSLKRLNRNFPKLNLFR 631
            EGI +A +RA A ELA DL   +  SE S KRL+R FP LN+ +
Sbjct: 551  EGIGFAGYRAEAMELANDLVRIDAISEYSFKRLHRTFPLLNVLQ 594


>ref|XP_003521773.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
            chloroplastic-like [Glycine max]
          Length = 570

 Score =  590 bits (1521), Expect = e-166
 Identities = 296/567 (52%), Positives = 397/567 (70%), Gaps = 2/567 (0%)
 Frame = -3

Query: 2319 MSISLRASFAPHLLLHSTFRRNSSGRRCRGFTIRIRSYQAMASAEAKATQPQTLDSKESH 2140
            M+ ++   F P    H     + S  R         +     S+ +K  Q  TLD K++H
Sbjct: 1    MTTTVSTDFLPLFNPHPNRTNSHSNSRTLPILNETTNINRTLSSVSKP-QTHTLDFKDTH 59

Query: 2139 YMKLLNRSCKAGKFNESLYFLEYMVGKGYKLDVILCTKLIKGLCSSRSVDKAVRVMDILE 1960
             +K L+RSCKAG FNESLYFL ++V KG+K DV+LCTKLI GL +S+++DKA++VM ILE
Sbjct: 60   LLKSLSRSCKAGNFNESLYFLRHLVNKGHKPDVVLCTKLIHGLFTSKTIDKAIQVMHILE 119

Query: 1959 SHGEPDVFAYNALVSGFCKAGRIESAIEVLGRMKSRRCPPDIVTYNILIGCFCTRGKXXX 1780
            +HG PD+ AYNA+++GFC+A RI+SA +VL RMK++   PDIVTYNILIG  C+RG    
Sbjct: 120  NHGHPDLIAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDS 179

Query: 1779 XXXXXXXXXXDKCRPTVVTFTILIEAALLQGGIGDAMKFLDEMMSQGLQPDNYTYTAIIR 1600
                      + C+PTVVT+TILIEA LLQGGI +AMK LDEM+   LQPD +TY +IIR
Sbjct: 180  ALEFKNQLLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIR 239

Query: 1599 GLCREGMVDAAYEFLKSLPSRGCDPDVMSYNVLLRGLLSYKRWEDGEKVVGEMLETGVKP 1420
            G+CREG VD A++ + S+ S+G  PDV++YN+LLRGLL+  +WE G +++ +M+  G + 
Sbjct: 240  GMCREGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEA 299

Query: 1419 NTVTYSLLINSLCHEGKLDRAKQLLDDMISRGLKPDSYSYDPLISAYCKDGKLDQAIEFM 1240
            N VTYS+LI+S+C +GK++    LL DM  +GLKPD Y YDPLI+A CK+G++D AIE +
Sbjct: 300  NVVTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVL 359

Query: 1239 NFMISNGFLPDIVNYNTILSALCKRGNVVHALEVLDKLAESGCSPNVSSYNVVIGGLWNN 1060
            + MIS+G +PDIVNYNTIL+ LCK+     AL + +KL E GCSPN SSYN +   LW+ 
Sbjct: 360  DVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWST 419

Query: 1059 GNRSRALDMVEEMIDKGINPDEVTYNLLISCLCRDGMVNEAIGLMRD--MERSGLQPIVI 886
            G++ RAL M+ EM+DKG++PD +TYN LISCLCRDGMV+EAI L+ D  ME S  +P V+
Sbjct: 420  GHKVRALGMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVV 479

Query: 885  TYNTVLLGLCKVHKIDMAINVLAEMVDKGCHTNETTYIILIEGIAYARHRAVAEELAKDL 706
            +YN VLLGLCKV ++  AI VLA MVDKGC  NETTY  LIEGI +      A +LA  L
Sbjct: 480  SYNIVLLGLCKVSRVSDAIEVLAAMVDKGCRPNETTYTFLIEGIGFGGCLNDARDLATTL 539

Query: 705  AMRNVFSEDSLKRLNRNFPKLNLFREI 625
               +  SE S +RL + F KL+++R++
Sbjct: 540  VNMDAISEHSFERLYKTFCKLDVYRQL 566


>ref|XP_006857320.1| hypothetical protein AMTR_s00067p00076830 [Amborella trichopoda]
            gi|548861413|gb|ERN18787.1| hypothetical protein
            AMTR_s00067p00076830 [Amborella trichopoda]
          Length = 602

 Score =  588 bits (1515), Expect = e-165
 Identities = 285/532 (53%), Positives = 384/532 (72%), Gaps = 1/532 (0%)
 Frame = -3

Query: 2223 IRIRSYQAMASAEAKATQPQTLDSKESHYMKLLNRSCKAGKFNESLYFLEYMVGKGYKLD 2044
            +R  +  A      ++ Q  + D  E+HY+KLLNRSCK+GK +E+LYFL+YMV KG+  D
Sbjct: 40   LRALAESATCDRTFRSNQLNSSDFNETHYIKLLNRSCKSGKLSETLYFLDYMVNKGHHPD 99

Query: 2043 VILCTKLIKGLCSSRSVDKAVRVMDILESHGEPDVFAYNALVSGFCKAGRIESAIEVLGR 1864
            VILCTKLIKG CS+++ +KA+RVM ILES+G PD+FAYN L++G CK   I+SA +   R
Sbjct: 100  VILCTKLIKGFCSAKNAEKAMRVMKILESYGNPDIFAYNTLINGLCKLNLIDSATKTFNR 159

Query: 1863 MKSRRCPPDIVTYNILIGCFCTRGKXXXXXXXXXXXXXDKCRPTVVTFTILIEAALLQGG 1684
            M   +C PDIVTYNILIG  C+RG+             + C PTVVT+TILIEA    GG
Sbjct: 160  MLETQCHPDIVTYNILIGSLCSRGELDLAMKFLDRLLENNCSPTVVTYTILIEATCNIGG 219

Query: 1683 IGDAMKFLDEMMSQGLQPDNYTYTAIIRGLCREGMVDAAYEFLKSLPSRGCDPDVMSYNV 1504
            I +AMK LDEM+++ L PD +TY  IIRG+C+EG +D A E  ++     C+PD +SYN+
Sbjct: 220  IDEAMKLLDEMLARNLHPDMFTYNVIIRGMCKEGKLDVALELFRT--KVNCEPDTISYNI 277

Query: 1503 LLRGLLSYKRWEDGEKVVGEMLETGVKPNTVTYSLLINSLCHEGKLDRAKQLLDDMISRG 1324
            LLR LLS +RW D E ++ EM+  G +PN VTYS++I +LC EGK+++A  +L DM+ RG
Sbjct: 278  LLRALLSQQRWGDAENILSEMISNGYEPNVVTYSIIIGALCQEGKVNQAIDILKDMMERG 337

Query: 1323 LKPDSYSYDPLISAYCKDGKLDQAIEFMNFMISNGFLPDIVNYNTILSALCKRGNVVHAL 1144
            LKPDSYSY+PLISA+C++GKLD AI F+  MI NG   DI+NYNT+LSA CK G    AL
Sbjct: 338  LKPDSYSYEPLISAFCREGKLDMAISFIEHMICNGCELDIINYNTLLSAFCKVGEANEAL 397

Query: 1143 EVLDKLAESG-CSPNVSSYNVVIGGLWNNGNRSRALDMVEEMIDKGINPDEVTYNLLISC 967
            E+L+ L E+  CSP+ SSYN VI GLW+NG++ RAL +V  M+ +G++PD +TYN+LI+C
Sbjct: 398  EILENLWETRLCSPDASSYNTVIYGLWSNGDQLRALKLVRVMVGRGVDPDNITYNILINC 457

Query: 966  LCRDGMVNEAIGLMRDMERSGLQPIVITYNTVLLGLCKVHKIDMAINVLAEMVDKGCHTN 787
            LCRDG+V+ A+ L+ DM+R+G +P VITYNTV+LGLCK+H+IDM I++LA+MV++GC   
Sbjct: 458  LCRDGLVDHALILLEDMKRAGFEPTVITYNTVILGLCKMHRIDMCIDMLAKMVERGCLPI 517

Query: 786  ETTYIILIEGIAYARHRAVAEELAKDLAMRNVFSEDSLKRLNRNFPKLNLFR 631
            E TY+ILIEG+AY    A A  L + L  R VFS++SLKRL +    L  ++
Sbjct: 518  EATYVILIEGVAYDGLLAEAVGLVEALLTRGVFSKESLKRLYKTLSMLESYK 569