BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00027711
         (1856 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004961565.1| PREDICTED: multisubstrate pseudouridine synt...   599   e-168
gb|AFW82437.1| hypothetical protein ZEAMMB73_597944 [Zea mays]        597   e-168
ref|NP_001146470.1| hypothetical protein [Zea mays] gi|219887425...   597   e-168
ref|XP_004961564.1| PREDICTED: multisubstrate pseudouridine synt...   592   e-166
gb|EOY11114.1| Pseudouridine synthase family protein isoform 2 [...   591   e-166
ref|XP_002272750.1| PREDICTED: multisubstrate pseudouridine synt...   590   e-166
dbj|BAJ90067.1| predicted protein [Hordeum vulgare subsp. vulgare]    588   e-165
ref|XP_002512230.1| tRNA pseudouridine synthase d, putative [Ric...   584   e-164
ref|XP_003568149.1| PREDICTED: pseudouridylate synthase 7 homolo...   583   e-164
ref|NP_187133.3| pseudouridine synthase [Arabidopsis thaliana] g...   580   e-163
ref|XP_006471920.1| PREDICTED: multisubstrate pseudouridine synt...   579   e-162
emb|CBI34194.3| unnamed protein product [Vitis vinifera]              579   e-162
ref|XP_006382775.1| hypothetical protein POPTR_0005s05300g [Popu...   578   e-162
gb|EOY11113.1| Pseudouridine synthase family protein, putative i...   574   e-161
ref|XP_006577278.1| PREDICTED: multisubstrate pseudouridine synt...   573   e-161
ref|XP_004142573.1| PREDICTED: putative pseudouridine synthase C...   570   e-160
ref|XP_004494684.1| PREDICTED: multisubstrate pseudouridine synt...   568   e-159
ref|XP_006604840.1| PREDICTED: multisubstrate pseudouridine synt...   567   e-159
ref|XP_003553755.1| PREDICTED: multisubstrate pseudouridine synt...   567   e-159
gb|EMJ09385.1| hypothetical protein PRUPE_ppa020985mg [Prunus pe...   563   e-157

>ref|XP_004961565.1| PREDICTED: multisubstrate pseudouridine synthase 7-like isoform X2
            [Setaria italica]
          Length = 685

 Score =  599 bits (1545), Expect = e-168
 Identities = 304/488 (62%), Positives = 367/488 (75%), Gaps = 3/488 (0%)
 Frame = +1

Query: 22   FLRFNLYKENKDTQEALGLIGKMLGVNQRSFGFAGTKDKRSVSTQRVTIFKQRAKRLSEL 201
            FLRF+LYKENKDTQEALG+IGKMLG+  RSFGFAGTKDKR+V+ Q+VT+FK +A RL+ L
Sbjct: 206  FLRFHLYKENKDTQEALGIIGKMLGLQPRSFGFAGTKDKRAVTLQQVTVFKVQANRLAAL 265

Query: 202  NSRMFGIKVGDFCYVNEGLVLGQLTGNHFTITLRGISADSEDIIKEATDSLWRNGFINYY 381
            N+R+FGIKVG+FCYV EGLVLGQL GN FTITLRG+ A+SED+IK A D L +NGFINYY
Sbjct: 266  NNRLFGIKVGNFCYVKEGLVLGQLMGNQFTITLRGVIAESEDVIKAAADGLGKNGFINYY 325

Query: 382  GLQRFGSGSVPTHLVGAALLKGEWKTAASLILDPREGERPIVREAREYYKEHGDVDLTLK 561
            GLQRFGSGS+PTHLVGAALL+GEWK A +LILDPREGER  + E R++YKEHGD+D  L+
Sbjct: 326  GLQRFGSGSIPTHLVGAALLRGEWKAAVNLILDPREGERDDINEVRKHYKEHGDIDKALR 385

Query: 562  KLPRHLVAERSILQCLKKFPGNYLQALKTIPRTLRMMYVHSYQSYLWNHAASMRVQKYGI 741
              PRHLVAER+ILQCLKK PGNYLQALK IPRTLRMMYVHSYQSYLWNHAASMRV+KYG+
Sbjct: 386  NFPRHLVAERAILQCLKKCPGNYLQALKGIPRTLRMMYVHSYQSYLWNHAASMRVEKYGM 445

Query: 742  SQVVLGDLVLCKEVLPTVCDSSE-HEXXXXXXXXXXXXXXXXXXXXXXVQFVKAVDSEDL 918
            SQVV GDLV  KE  P    S +  E                      +Q VK VDS DL
Sbjct: 446  SQVVEGDLVYNKESPPEESTSVDIAETDDGHTNSSEIDLCSEAQPEETIQSVKIVDSGDL 505

Query: 919  LKGHYTFEDVVLPLPGSRIRYPTNDIANVYHDLAKKDGITLTESVHGAKEFSISSMKGAY 1098
            LKG YTF+DVVLPLPGS+  +P N++A +YH++AKKDGI+L E+ HG KEFSI+SMKG Y
Sbjct: 506  LKGMYTFDDVVLPLPGSQAMFPGNEVAEIYHEMAKKDGISLMENAHGVKEFSITSMKGGY 565

Query: 1099 RQVFQRPIDFVWELVDYTNDNLPLAETDLNILEKAANMTQNEVHVDGICSSQIRTSDTEN 1278
            R+VFQRPIDF WEL+ YT+D+  LAETDL++L +      NE+         + T  +++
Sbjct: 566  RRVFQRPIDFQWELMTYTDDSSSLAETDLDVLSRIKPKEANEL---------VTTDQSQD 616

Query: 1279 SIGMHLDEDSNENPLSTIET--INSSDILSKKQALKMAFTLPTSCYATMAIREILKSSTS 1452
             +    D  +  N   ++E     S D   +K A+K+ FTLP SCYATMAIRE+LK+STS
Sbjct: 617  KLEKDSDTSTPTNGSDSLENKPTGSPDTAPRKMAIKLVFTLPASCYATMAIRELLKTSTS 676

Query: 1453 VSYHKALN 1476
            V+Y K L+
Sbjct: 677  VAYQKTLS 684


>gb|AFW82437.1| hypothetical protein ZEAMMB73_597944 [Zea mays]
          Length = 653

 Score =  597 bits (1538), Expect = e-168
 Identities = 310/491 (63%), Positives = 365/491 (74%), Gaps = 6/491 (1%)
 Frame = +1

Query: 22   FLRFNLYKENKDTQEALGLIGKMLGVNQRSFGFAGTKDKRSVSTQRVTIFKQRAKRLSEL 201
            FLRF+LYKENKDTQEALG+IGKMLG+  RSFGFAGTKDKR+V+TQ+VT+FK +A +L  L
Sbjct: 175  FLRFHLYKENKDTQEALGVIGKMLGLQPRSFGFAGTKDKRAVTTQQVTVFKVQASKLLAL 234

Query: 202  NSRMFGIKVGDFCYVNEGLVLGQLTGNHFTITLRGISADSEDIIKEATDSLWRNGFINYY 381
            N R+FGIKVG+FCYV EGLVLGQLTGN FTITLRG++A+SED+IK A D L +NGFINYY
Sbjct: 235  NKRLFGIKVGNFCYVKEGLVLGQLTGNRFTITLRGVTAESEDMIKIAVDGLGKNGFINYY 294

Query: 382  GLQRFGSGSVPTHLVGAALLKGEWKTAASLILDPREGERPIVREAREYYKEHGDVDLTLK 561
            GLQRFGSGS+PTHLVGAALL+GEWK A +LILDPREGER  + E R+ YKEHGD+D+ L+
Sbjct: 295  GLQRFGSGSIPTHLVGAALLRGEWKVAVNLILDPREGERDDINEVRKRYKEHGDIDMALR 354

Query: 562  KLPRHLVAERSILQCLKKFPGNYLQALKTIPRTLRMMYVHSYQSYLWNHAASMRVQKYGI 741
              PRHLVAER+ILQCLKK PGN+LQALK IPRTLRMMYVHSYQSYLWNHAASMRV+KYGI
Sbjct: 355  NFPRHLVAERAILQCLKKCPGNHLQALKGIPRTLRMMYVHSYQSYLWNHAASMRVEKYGI 414

Query: 742  SQVVLGDLVLCKEVLPTVCDSSEH------EXXXXXXXXXXXXXXXXXXXXXXVQFVKAV 903
            SQVV GDLV  KE     C S E       E                      +Q  K V
Sbjct: 415  SQVVEGDLVYNKE-----CPSEESTSVDILETDDDHTNSIEIDLCSEAQPEESIQSAKIV 469

Query: 904  DSEDLLKGHYTFEDVVLPLPGSRIRYPTNDIANVYHDLAKKDGITLTESVHGAKEFSISS 1083
            DS D  KG YTF+DVVLPLPGS+  +P N+IA +YH++A+KDGI+LTE+ HG KEFSI+S
Sbjct: 470  DSGDFTKGIYTFDDVVLPLPGSQALFPGNEIAEIYHEMARKDGISLTENAHGVKEFSITS 529

Query: 1084 MKGAYRQVFQRPIDFVWELVDYTNDNLPLAETDLNILEKAANMTQNEVHVDGICSSQIRT 1263
            MKG YR+VFQRPI F WEL+ YT+D   LAETDL++L +      NE     + S Q   
Sbjct: 530  MKGGYRRVFQRPIGFEWELITYTDDTSSLAETDLDVLSRTKPKEANE-----LISKQESQ 584

Query: 1264 SDTENSIGMHLDEDSNENPLSTIETINSSDILSKKQALKMAFTLPTSCYATMAIREILKS 1443
               E +    +  + N    S  + I S DI  KK ALK+AFTLPTSCYATMAIRE+LK+
Sbjct: 585  DKLEKAPDTSVPTNGNS---SQEKLIGSPDIRPKKLALKLAFTLPTSCYATMAIRELLKT 641

Query: 1444 STSVSYHKALN 1476
            STSV+Y K L+
Sbjct: 642  STSVAYQKTLS 652


>ref|NP_001146470.1| hypothetical protein [Zea mays] gi|219887425|gb|ACL54087.1| unknown
            [Zea mays] gi|413949796|gb|AFW82445.1| hypothetical
            protein ZEAMMB73_396305 [Zea mays]
          Length = 682

 Score =  597 bits (1538), Expect = e-168
 Identities = 310/491 (63%), Positives = 365/491 (74%), Gaps = 6/491 (1%)
 Frame = +1

Query: 22   FLRFNLYKENKDTQEALGLIGKMLGVNQRSFGFAGTKDKRSVSTQRVTIFKQRAKRLSEL 201
            FLRF+LYKENKDTQEALG+IGKMLG+  RSFGFAGTKDKR+V+TQ+VT+FK +A +L  L
Sbjct: 204  FLRFHLYKENKDTQEALGVIGKMLGLQPRSFGFAGTKDKRAVTTQQVTVFKVQASKLLAL 263

Query: 202  NSRMFGIKVGDFCYVNEGLVLGQLTGNHFTITLRGISADSEDIIKEATDSLWRNGFINYY 381
            N R+FGIKVG+FCYV EGLVLGQLTGN FTITLRG++A+SED+IK A D L +NGFINYY
Sbjct: 264  NKRLFGIKVGNFCYVKEGLVLGQLTGNRFTITLRGVTAESEDMIKIAVDGLGKNGFINYY 323

Query: 382  GLQRFGSGSVPTHLVGAALLKGEWKTAASLILDPREGERPIVREAREYYKEHGDVDLTLK 561
            GLQRFGSGS+PTHLVGAALL+GEWK A +LILDPREGER  + E R+ YKEHGD+D+ L+
Sbjct: 324  GLQRFGSGSIPTHLVGAALLRGEWKVAVNLILDPREGERDDINEVRKRYKEHGDIDMALR 383

Query: 562  KLPRHLVAERSILQCLKKFPGNYLQALKTIPRTLRMMYVHSYQSYLWNHAASMRVQKYGI 741
              PRHLVAER+ILQCLKK PGN+LQALK IPRTLRMMYVHSYQSYLWNHAASMRV+KYGI
Sbjct: 384  NFPRHLVAERAILQCLKKCPGNHLQALKGIPRTLRMMYVHSYQSYLWNHAASMRVEKYGI 443

Query: 742  SQVVLGDLVLCKEVLPTVCDSSEH------EXXXXXXXXXXXXXXXXXXXXXXVQFVKAV 903
            SQVV GDLV  KE     C S E       E                      +Q  K V
Sbjct: 444  SQVVEGDLVYNKE-----CPSEESTSVDILETDDDHTNSIEIDLCSEAQPEESIQSAKIV 498

Query: 904  DSEDLLKGHYTFEDVVLPLPGSRIRYPTNDIANVYHDLAKKDGITLTESVHGAKEFSISS 1083
            DS D  KG YTF+DVVLPLPGS+  +P N+IA +YH++A+KDGI+LTE+ HG KEFSI+S
Sbjct: 499  DSGDFTKGIYTFDDVVLPLPGSQALFPGNEIAEIYHEMARKDGISLTENAHGVKEFSITS 558

Query: 1084 MKGAYRQVFQRPIDFVWELVDYTNDNLPLAETDLNILEKAANMTQNEVHVDGICSSQIRT 1263
            MKG YR+VFQRPI F WEL+ YT+D   LAETDL++L +      NE     + S Q   
Sbjct: 559  MKGGYRRVFQRPIGFEWELITYTDDTSSLAETDLDVLSRTKPKEANE-----LISKQESQ 613

Query: 1264 SDTENSIGMHLDEDSNENPLSTIETINSSDILSKKQALKMAFTLPTSCYATMAIREILKS 1443
               E +    +  + N    S  + I S DI  KK ALK+AFTLPTSCYATMAIRE+LK+
Sbjct: 614  DKLEKAPDTSVPTNGNS---SQEKLIGSPDIRPKKLALKLAFTLPTSCYATMAIRELLKT 670

Query: 1444 STSVSYHKALN 1476
            STSV+Y K L+
Sbjct: 671  STSVAYQKTLS 681


>ref|XP_004961564.1| PREDICTED: multisubstrate pseudouridine synthase 7-like isoform X1
            [Setaria italica]
          Length = 686

 Score =  592 bits (1527), Expect = e-166
 Identities = 301/481 (62%), Positives = 362/481 (75%), Gaps = 3/481 (0%)
 Frame = +1

Query: 22   FLRFNLYKENKDTQEALGLIGKMLGVNQRSFGFAGTKDKRSVSTQRVTIFKQRAKRLSEL 201
            FLRF+LYKENKDTQEALG+IGKMLG+  RSFGFAGTKDKR+V+ Q+VT+FK +A RL+ L
Sbjct: 206  FLRFHLYKENKDTQEALGIIGKMLGLQPRSFGFAGTKDKRAVTLQQVTVFKVQANRLAAL 265

Query: 202  NSRMFGIKVGDFCYVNEGLVLGQLTGNHFTITLRGISADSEDIIKEATDSLWRNGFINYY 381
            N+R+FGIKVG+FCYV EGLVLGQL GN FTITLRG+ A+SED+IK A D L +NGFINYY
Sbjct: 266  NNRLFGIKVGNFCYVKEGLVLGQLMGNQFTITLRGVIAESEDVIKAAADGLGKNGFINYY 325

Query: 382  GLQRFGSGSVPTHLVGAALLKGEWKTAASLILDPREGERPIVREAREYYKEHGDVDLTLK 561
            GLQRFGSGS+PTHLVGAALL+GEWK A +LILDPREGER  + E R++YKEHGD+D  L+
Sbjct: 326  GLQRFGSGSIPTHLVGAALLRGEWKAAVNLILDPREGERDDINEVRKHYKEHGDIDKALR 385

Query: 562  KLPRHLVAERSILQCLKKFPGNYLQALKTIPRTLRMMYVHSYQSYLWNHAASMRVQKYGI 741
              PRHLVAER+ILQCLKK PGNYLQALK IPRTLRMMYVHSYQSYLWNHAASMRV+KYG+
Sbjct: 386  NFPRHLVAERAILQCLKKCPGNYLQALKGIPRTLRMMYVHSYQSYLWNHAASMRVEKYGM 445

Query: 742  SQVVLGDLVLCKEVLPTVCDSSE-HEXXXXXXXXXXXXXXXXXXXXXXVQFVKAVDSEDL 918
            SQVV GDLV  KE  P    S +  E                      +Q VK VDS DL
Sbjct: 446  SQVVEGDLVYNKESPPEESTSVDIAETDDGHTNSSEIDLCSEAQPEETIQSVKIVDSGDL 505

Query: 919  LKGHYTFEDVVLPLPGSRIRYPTNDIANVYHDLAKKDGITLTESVHGAKEFSISSMKGAY 1098
            LKG YTF+DVVLPLPGS+  +P N++A +YH++AKKDGI+L E+ HG KEFSI+SMKG Y
Sbjct: 506  LKGMYTFDDVVLPLPGSQAMFPGNEVAEIYHEMAKKDGISLMENAHGVKEFSITSMKGGY 565

Query: 1099 RQVFQRPIDFVWELVDYTNDNLPLAETDLNILEKAANMTQNEVHVDGICSSQIRTSDTEN 1278
            R+VFQRPIDF WEL+ YT+D+  LAETDL++L +      NE+         + T  +++
Sbjct: 566  RRVFQRPIDFQWELMTYTDDSSSLAETDLDVLSRIKPKEANEL---------VTTDQSQD 616

Query: 1279 SIGMHLDEDSNENPLSTIET--INSSDILSKKQALKMAFTLPTSCYATMAIREILKSSTS 1452
             +    D  +  N   ++E     S D   +K A+K+ FTLP SCYATMAIRE+LK+STS
Sbjct: 617  KLEKDSDTSTPTNGSDSLENKPTGSPDTAPRKMAIKLVFTLPASCYATMAIRELLKTSTS 676

Query: 1453 V 1455
            V
Sbjct: 677  V 677


>gb|EOY11114.1| Pseudouridine synthase family protein isoform 2 [Theobroma cacao]
          Length = 732

 Score =  591 bits (1524), Expect = e-166
 Identities = 308/503 (61%), Positives = 371/503 (73%), Gaps = 18/503 (3%)
 Frame = +1

Query: 22   FLRFNLYKENKDTQEALGLIGKMLGVNQRSFGFAGTKDKRSVSTQRVTIFKQRAKRLSEL 201
            FLRF+LYKENKDTQEALGLIGKMLG+  RSFGFAGTKDKRSVSTQRVT+FKQ A RL+ L
Sbjct: 231  FLRFHLYKENKDTQEALGLIGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFKQHASRLAAL 290

Query: 202  NSRMFGIKVGDFCYVNEGLVLGQLTGNHFTITLRGISADSEDIIKEATDSLWRNGFINYY 381
            N R+ GIKVGDFCYV +  +LGQL GN FTI LRGI ADSE+ IK + +SL R+GFINY+
Sbjct: 291  NERLIGIKVGDFCYVKDDFLLGQLLGNRFTIILRGIVADSEETIKASVESLGRHGFINYF 350

Query: 382  GLQRFGSGSVPTHLVGAALLKGEWKTAASLILDPREGERPIVREAREYYKEHGDVDLTLK 561
            GLQRFGSGS+PTH +GA LL+GEW+ AAS ILDPREGER  V +AREYYKE GD++ TL+
Sbjct: 351  GLQRFGSGSIPTHRIGATLLRGEWQAAASTILDPREGERDFVSKAREYYKETGDIEGTLR 410

Query: 562  KLPRHLVAERSILQCLKKFPGNYLQALKTIPRTLRMMYVHSYQSYLWNHAASMRVQKYGI 741
            +LPRHLVAER++LQCLKK PGNYLQALK IPRTLRMMYVHSYQSYLWNHAASMRV+KYG 
Sbjct: 411  QLPRHLVAERAMLQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASMRVEKYGS 470

Query: 742  SQVVLGDLVLCK-------EVLPTVCDSSEHEXXXXXXXXXXXXXXXXXXXXXXVQFVKA 900
            ++VVLGDLV CK       +V+P+  + +  E                         VKA
Sbjct: 471  NEVVLGDLVYCKGNDAEKVKVVPSEHEDNNFEDAYDCSQLDEISGTDLPEGKN--NLVKA 528

Query: 901  VDSEDLLKGHYTFEDVVLPLPGSRIRYPTNDIANVYHDLAKKDGITLTESVHGAKEFSIS 1080
            + + D+  G+YT EDVVLP+PGSRI YP NDIANVYHD+AKKDGI+LTESVH  KEFSI+
Sbjct: 529  ITAADISTGNYTIEDVVLPMPGSRIIYPVNDIANVYHDMAKKDGISLTESVHNIKEFSIT 588

Query: 1081 SMKGAYRQVFQRPIDFVWELVDYTNDNLPLAETDLNILEKA--ANMTQNEVHVDGICSS- 1251
            SM G+YR+VFQ+PIDF WEL+ YT+ ++ L+ETDL+ + K    N+ + E   DG     
Sbjct: 589  SMTGSYRRVFQKPIDFEWELLSYTDGSIALSETDLDKIAKTKPVNLVKEEKPTDGTEGQD 648

Query: 1252 --------QIRTSDTENSIGMHLDEDSNENPLSTIETINSSDILSKKQALKMAFTLPTSC 1407
                    +    D + S G    E S E     I ++  S+ L  ++ALK+AFTLP SC
Sbjct: 649  SSDHMEHIESFEDDKKFSTGNVEVEGSREAEPPQIHSLPESNSLGTQKALKLAFTLPASC 708

Query: 1408 YATMAIREILKSSTSVSYHKALN 1476
            YATMAIRE+LK+STSV++HK LN
Sbjct: 709  YATMAIRELLKTSTSVAFHKTLN 731


>ref|XP_002272750.1| PREDICTED: multisubstrate pseudouridine synthase 7-like [Vitis
            vinifera]
          Length = 694

 Score =  590 bits (1520), Expect = e-166
 Identities = 311/504 (61%), Positives = 367/504 (72%), Gaps = 19/504 (3%)
 Frame = +1

Query: 22   FLRFNLYKENKDTQEALGLIGKMLGVNQRSFGFAGTKDKRSVSTQRVTIFKQRAKRLSEL 201
            FLRF+LYKENKDTQEA+GLIGKMLG+  RSFGFAGTKDKRSVSTQRVT+FKQ A RL+ L
Sbjct: 190  FLRFHLYKENKDTQEAIGLIGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFKQHANRLAAL 249

Query: 202  NSRMFGIKVGDFCYVNEGLVLGQLTGNHFTITLRGISADSEDIIKEATDSLWRNGFINYY 381
            N R+ GIKVGDFC+V EGLVLGQL GN FTITLRG+ ADSE+ IK + D+L R GFINY+
Sbjct: 250  NERLIGIKVGDFCHVREGLVLGQLLGNRFTITLRGVVADSEETIKASADALGRLGFINYF 309

Query: 382  GLQRFGSGSVPTHLVGAALLKGEWKTAASLILDPREGERPIVREAREYYKEHGDVDLTLK 561
            GLQRFGSGSVPTHL+GAALL+GEW+TA SLILDPREGER  +R+AREYYKE  D++ TL+
Sbjct: 310  GLQRFGSGSVPTHLIGAALLRGEWETAVSLILDPREGERDAIRKAREYYKESDDIEGTLR 369

Query: 562  KLPRHLVAERSILQCLKKFPGNYLQALKTIPRTLRMMYVHSYQSYLWNHAASMRVQKYGI 741
            + PRHLVAER+ILQCLKK+PGNYLQALK IPRTLRMMYVHSYQSYLWNHAASMRVQ YG 
Sbjct: 370  QFPRHLVAERAILQCLKKYPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASMRVQNYGT 429

Query: 742  SQVVLGDLVLCK----EVLPTVCDSSEHEXXXXXXXXXXXXXXXXXXXXXXVQF--VKAV 903
             QVVLGDLV CK    E +  V +S   +                       +   VKA+
Sbjct: 430  KQVVLGDLVYCKGDNAEKVTRVVNSEFDDDGCSDAFDSSHFDEISETDLPEERNDPVKAL 489

Query: 904  DSEDLLKGHYTFEDVVLPLPGSRIRYPTNDIANVYHDLAKKDGITLTESVHGAKEFSISS 1083
            D+EDLL G+YT +DVVLPLPGSR  YPTNDIA VYHD AKKD I+LTES H  KEFSI++
Sbjct: 490  DAEDLLTGNYTIDDVVLPLPGSRAIYPTNDIAQVYHDFAKKDAISLTESAHSVKEFSITN 549

Query: 1084 MKGAYRQVFQRPIDFVWELVDYTNDNLPLAETD---------LNILEKAANMTQNEVHVD 1236
            M G +R+VFQ+PIDF WEL+ YT  N+PLAETD          NI+    +   NE    
Sbjct: 550  MTGGFRRVFQKPIDFEWELLTYTEGNIPLAETDWDKITKSKPSNIIGGEDSRNGNEKENS 609

Query: 1237 GICSSQIRTSDTENSIGMHLDEDS----NENPLSTIETINSSDILSKKQALKMAFTLPTS 1404
              C  Q  +   E+++ +  D +      E  L  +E    S     ++ALK++FTLP S
Sbjct: 610  FQCMKQ--SESFEHNVNLSTDNNEPNGVTEIGLPQVEPQFESGAPEAQRALKLSFTLPAS 667

Query: 1405 CYATMAIREILKSSTSVSYHKALN 1476
            CYATMAIRE+LK+STSV++ K LN
Sbjct: 668  CYATMAIRELLKTSTSVAFQKTLN 691


>dbj|BAJ90067.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 700

 Score =  588 bits (1516), Expect = e-165
 Identities = 297/487 (60%), Positives = 368/487 (75%), Gaps = 2/487 (0%)
 Frame = +1

Query: 22   FLRFNLYKENKDTQEALGLIGKMLGVNQRSFGFAGTKDKRSVSTQRVTIFKQRAKRLSEL 201
            FLRF+L KENKDTQ+ALG+IGKMLG+  RSFGF+GTKDKR+V+TQ+VT+FK  A +++ L
Sbjct: 214  FLRFHLCKENKDTQDALGVIGKMLGLQSRSFGFSGTKDKRAVTTQQVTVFKVPANKIAAL 273

Query: 202  NSRMFGIKVGDFCYVNEGLVLGQLTGNHFTITLRGISADSEDIIKEATDSLWRNGFINYY 381
            N R++GIKVG+FCYV EGL LGQL GN FTITLRG+ A+SED+IK A D L +NGFINYY
Sbjct: 274  NKRLYGIKVGNFCYVKEGLGLGQLMGNRFTITLRGVVAESEDMIKAAVDGLGKNGFINYY 333

Query: 382  GLQRFGSGSVPTHLVGAALLKGEWKTAASLILDPREGERPIVREAREYYKEHGDVDLTLK 561
            GLQRFGSGSVPTHL+GAALL+GEWK+A  L+LDPREGER  ++E RE+YK+HGD+D+ L+
Sbjct: 334  GLQRFGSGSVPTHLIGAALLRGEWKSAVHLVLDPREGERDDIKEVREHYKQHGDIDMALR 393

Query: 562  KLPRHLVAERSILQCLKKFPGNYLQALKTIPRTLRMMYVHSYQSYLWNHAASMRVQKYGI 741
              PRHLVAE++ILQCL+K PGNYLQALK IPR LRMMYVH+YQSYLWNHAASMRV+KYGI
Sbjct: 394  NFPRHLVAEKAILQCLRKCPGNYLQALKGIPRPLRMMYVHAYQSYLWNHAASMRVEKYGI 453

Query: 742  SQVVLGDLVLCKEVLPTVCDSSEHEXXXXXXXXXXXXXXXXXXXXXXVQFVKAVDSEDLL 921
            SQV+ GDLV  KE  P    S                          +Q VK VDSEDL 
Sbjct: 454  SQVIEGDLVYTKESHPGEATSVGTSEVDSLTNASEIDICLEALPEENIQSVKLVDSEDLT 513

Query: 922  KGHYTFEDVVLPLPGSRIRYPTNDIANVYHDLAKKDGITLTESVHGAKEFSISSMKGAYR 1101
            KG Y+FEDVVLPLPGS+  +P N++A +YH++AKKDGI+LTE+ HG KEFSI+SMKG YR
Sbjct: 514  KGIYSFEDVVLPLPGSQALFPGNEVAQIYHEMAKKDGISLTENAHGVKEFSITSMKGGYR 573

Query: 1102 QVFQRPIDFVWELVDYTNDNLPLAETDLNILEKAANMTQNEVHVDGICSSQIRTSDTENS 1281
            +VFQ+PIDF WEL+ YT+D+  LAETDL+IL K   +T+ +V  +   S    ++  +  
Sbjct: 574  RVFQKPIDFEWELMTYTDDSASLAETDLDILSK-GKLTEAKVANEPAPSGNSASNPPDCK 632

Query: 1282 IGMHLDEDSNENPLSTIE--TINSSDILSKKQALKMAFTLPTSCYATMAIREILKSSTSV 1455
            +   L+     +  S +E  +I SSD L  K A+K+AFTLP S YATMAIRE+LK STSV
Sbjct: 633  LEEPLETSMPTSETSLVENKSIGSSDTLPSKLAVKLAFTLPASSYATMAIRELLKDSTSV 692

Query: 1456 SYHKALN 1476
            +Y K L+
Sbjct: 693  AYQKTLD 699


>ref|XP_002512230.1| tRNA pseudouridine synthase d, putative [Ricinus communis]
            gi|223548191|gb|EEF49682.1| tRNA pseudouridine synthase
            d, putative [Ricinus communis]
          Length = 753

 Score =  584 bits (1505), Expect = e-164
 Identities = 303/510 (59%), Positives = 370/510 (72%), Gaps = 25/510 (4%)
 Frame = +1

Query: 22   FLRFNLYKENKDTQEALGLIGKMLGVNQRSFGFAGTKDKRSVSTQRVTIFKQRAKRLSEL 201
            FLRF+LYKENKDTQEA+GLIGKMLG+  RSFGFAGTKDKRSVSTQRVT+FKQ A RL+ L
Sbjct: 243  FLRFHLYKENKDTQEAIGLIGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFKQHASRLAAL 302

Query: 202  NSRMFGIKVGDFCYVNEGLVLGQLTGNHFTITLRGISADSEDIIKEATDSLWRNGFINYY 381
            N R+ GIKVGDFCYVNEGL+LGQL GN FT+TLRG+ ADSED IK + DSL R+GFINY+
Sbjct: 303  NDRLIGIKVGDFCYVNEGLLLGQLLGNRFTVTLRGVVADSEDTIKGSADSLGRHGFINYF 362

Query: 382  GLQRFGSGSVPTHLVGAALLKGEWKTAASLILDPREGERPI-------VREAREYYKEHG 540
            GLQRFGSGSVPTHL+GAALL+GEWK A S+ILDPREG+  +       +R AREYYKE  
Sbjct: 363  GLQRFGSGSVPTHLIGAALLRGEWKYAVSMILDPREGDILLLVICFMWMRMAREYYKESD 422

Query: 541  DVDLTLKKLPRHLVAERSILQCLKKFPGNYLQALKTIPRTLRMMYVHSYQSYLWNHAASM 720
            D+D TL++LPR+L AER++LQCLKK PGNYLQALK IPRTLRMMYVHSYQSYLWNHAASM
Sbjct: 423  DIDGTLRQLPRYLTAERAVLQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASM 482

Query: 721  RVQKYGISQVVLGDLVLCK------EV--LPTVCDSSE-HEXXXXXXXXXXXXXXXXXXX 873
            RVQKYG  QVV+GDLV CK      E+    + C+  +  +                   
Sbjct: 483  RVQKYGTDQVVVGDLVYCKGDDTEREIGSANSACEDDDCEDMYGCSNLDETSGTDLSERK 542

Query: 874  XXXVQFVKAVDSEDLLKGHYTFEDVVLPLPGSRIRYPTNDIANVYHDLAKKDGITLTESV 1053
               V+  +AV++EDL  G+YT  DV+LP+PGSR+ YPTNDIA VYHDLA+KD I L ESV
Sbjct: 543  DTLVKVEQAVNAEDLSTGNYTINDVILPMPGSRVSYPTNDIAKVYHDLAEKDAINLAESV 602

Query: 1054 HGAKEFSISSMKGAYRQVFQRPIDFVWELVDYTNDNLPLAETDLNILEKAANM------- 1212
            H AKEFSI+SM G+YR+VFQ+P+DF WE++ YT+   PLAETD+  L KA ++       
Sbjct: 603  HSAKEFSITSMTGSYRRVFQKPMDFEWEILSYTDGTTPLAETDMEKLAKAKSIELNKEEE 662

Query: 1213 -TQNEVHVDGICSSQIRTSDTENSIGMHLD-EDSNENPLSTIETINSSDILSKKQALKMA 1386
              +N+      C  Q  +S  +  +    + E   E  ++ +E +   +    + ALK+ 
Sbjct: 663  TKKNDTKSPSDCMRQPMSSGNDLHLSAEYNREGEREVEVAKVEPLYGPNTRGAQTALKLT 722

Query: 1387 FTLPTSCYATMAIREILKSSTSVSYHKALN 1476
            FTLP SCYATMAIRE+LK+STSV++HK LN
Sbjct: 723  FTLPASCYATMAIRELLKTSTSVAFHKTLN 752


>ref|XP_003568149.1| PREDICTED: pseudouridylate synthase 7 homolog [Brachypodium
            distachyon]
          Length = 693

 Score =  583 bits (1504), Expect = e-164
 Identities = 302/492 (61%), Positives = 369/492 (75%), Gaps = 7/492 (1%)
 Frame = +1

Query: 22   FLRFNLYKENKDTQEALGLIGKMLGVNQRSFGFAGTKDKRSVSTQRVTIFKQRAKRLSEL 201
            FLRF+L KENKDTQ+ALG+IGKMLG+  R+FGF+GTKDKR+V+TQ+VT+FK  A +L+ L
Sbjct: 207  FLRFHLCKENKDTQDALGVIGKMLGLQPRAFGFSGTKDKRAVTTQQVTVFKVPANKLAAL 266

Query: 202  NSRMFGIKVGDFCYVNEGLVLGQLTGNHFTITLRGISADSEDIIKEATDSLWRNGFINYY 381
            N R+FGIKVG+FCYV EGL LGQL GN FTITLRG+ A+SE +IK A DSL +NGFINYY
Sbjct: 267  NKRLFGIKVGNFCYVKEGLGLGQLMGNRFTITLRGVVAESEGVIKAAVDSLGKNGFINYY 326

Query: 382  GLQRFGSGSVPTHLVGAALLKGEWKTAASLILDPREGERPIVREAREYYKEHGDVDLTLK 561
            GLQRFGS SVPTHLVG+ALL+GEWKTA  LILDPREGER  +++ RE+YKEHGD+D+ L+
Sbjct: 327  GLQRFGSSSVPTHLVGSALLRGEWKTAVKLILDPREGERDDIKKVREHYKEHGDIDMALR 386

Query: 562  KLPRHLVAERSILQCLKKFPGNYLQALKTIPRTLRMMYVHSYQSYLWNHAASMRVQKYGI 741
              PRHLVAE++ILQCL+K P NYLQALK IPRTLRMMYVHSYQSYLWNHAASMRVQKYGI
Sbjct: 387  NFPRHLVAEKAILQCLRKCPENYLQALKGIPRTLRMMYVHSYQSYLWNHAASMRVQKYGI 446

Query: 742  SQVVLGDLVLCKEVLPTVCDS-SEHEXXXXXXXXXXXXXXXXXXXXXXVQFVKAVDSEDL 918
            SQV+ GDL+  KE  P    S    E                      +Q VK VDSEDL
Sbjct: 447  SQVIEGDLIYSKESHPGEATSVGTSETDDDHANSSEIDICSETLPEENIQSVKIVDSEDL 506

Query: 919  LKGHYTFEDVVLPLPGSRIRYPTNDIANVYHDLAKKDGITLTESVHGAKEFSISSMKGAY 1098
            LKG Y+FEDVVLPLPGS+  +P N++A +YH++AKKDGI+LT S HG KEFSI++MKG+Y
Sbjct: 507  LKGIYSFEDVVLPLPGSQALFPGNEVAEIYHEMAKKDGISLTGSAHGVKEFSITNMKGSY 566

Query: 1099 RQVFQRPIDFVWELVDYTNDNLPLAETDLNILEKA--ANMTQNEVHVDGICSSQIR---- 1260
            R+VFQRPIDF WEL+ YT+++  LAETD++IL K        NE    G+ +S+      
Sbjct: 567  RRVFQRPIDFEWELMKYTDESASLAETDMDILSKVKLTEAKANEPGSSGVSNSKPADCKL 626

Query: 1261 TSDTENSIGMHLDEDSNENPLSTIETINSSDILSKKQALKMAFTLPTSCYATMAIREILK 1440
             S +ENS+       ++E  L   ++  SSDI   K A+K+AFTLP S YATMAIRE+LK
Sbjct: 627  ESPSENSM------PTSETSLGENKSNGSSDISPSKLAVKLAFTLPASTYATMAIRELLK 680

Query: 1441 SSTSVSYHKALN 1476
            + TSV+Y K L+
Sbjct: 681  NPTSVAYQKTLD 692


>ref|NP_187133.3| pseudouridine synthase [Arabidopsis thaliana]
            gi|52354299|gb|AAU44470.1| hypothetical protein AT3G04820
            [Arabidopsis thaliana] gi|61742699|gb|AAX55170.1|
            hypothetical protein At3g04820 [Arabidopsis thaliana]
            gi|332640619|gb|AEE74140.1| pseudouridine synthase
            [Arabidopsis thaliana]
          Length = 715

 Score =  580 bits (1496), Expect = e-163
 Identities = 310/494 (62%), Positives = 364/494 (73%), Gaps = 9/494 (1%)
 Frame = +1

Query: 22   FLRFNLYKENKDTQEALGLIGKMLGVNQRSFGFAGTKDKRSVSTQRVTIFKQRAKRLSEL 201
            FLRF+LYKENKDTQEALGLIGKMLGV  +SFGF+GTKDKRSVSTQRVT+FKQ+A +L+ L
Sbjct: 228  FLRFHLYKENKDTQEALGLIGKMLGVQPKSFGFSGTKDKRSVSTQRVTVFKQQASKLAAL 287

Query: 202  NSRMFGIKVGDFCYVNEGLVLGQLTGNHFTITLRGISADSEDIIKEATDSLWRNGFINYY 381
            N R+FGIKVGDFC V EGL+LGQL GN FTITLRG+ ADSE+ IK++ +SL ++GFINY+
Sbjct: 288  NKRLFGIKVGDFCNVKEGLLLGQLMGNRFTITLRGVVADSEETIKQSAESLGKDGFINYF 347

Query: 382  GLQRFGSGSVPTHLVGAALLKGEWKTAASLILDPREGERPIVREAREYYKEHGDVDLTLK 561
            GLQRFGSGSVPTH VGAALLKGEWK A  +ILDPRE ER +V +AREYYKE GD+D TL+
Sbjct: 348  GLQRFGSGSVPTHHVGAALLKGEWKDAVDMILDPRETERHVVNDAREYYKETGDIDGTLR 407

Query: 562  KLPRHLVAERSILQCLKKFPGNYLQALKTIPRTLRMMYVHSYQSYLWNHAASMRVQKYGI 741
            +LPR+LVAER+ILQCLKK PGNYLQALK IPRTLRMMYVHSYQSYLWN+AAS+RV+ YG 
Sbjct: 408  QLPRYLVAERAILQCLKKCPGNYLQALKGIPRTLRMMYVHSYQSYLWNNAASLRVKNYGT 467

Query: 742  SQVVLGDLVLCK-EVLPTVCDS--SEHEXXXXXXXXXXXXXXXXXXXXXXVQ--FVKAVD 906
            SQVVLGDLV  K +    + DS  SEH                        +   VK V 
Sbjct: 468  SQVVLGDLVSTKVDAAKRMVDSLTSEHNESSEEALDCDQVDDTAVVDLPAERSDLVKVVS 527

Query: 907  SEDLLKGHYTFEDVVLPLPGSRIRYPTNDIANVYHDLAKKDGITLTESVHGAKEFSISSM 1086
             EDL  G Y+  D+VLPLPGSR+ YP+NDIA +YHDLAKKDGI+LTES+HG KEFSI+SM
Sbjct: 528  IEDLEAGTYSTSDIVLPLPGSRVIYPSNDIAEIYHDLAKKDGISLTESIHGVKEFSITSM 587

Query: 1087 KGAYRQVFQRPIDFVWELVDYTNDNLPLAETDLNILEKAANMTQNEVHVDGICSSQIRTS 1266
             G YR+VFQ+PIDF WEL+ YT+ N PLAETDL+ +    N    +V        +   S
Sbjct: 588  TGGYRRVFQKPIDFEWELLTYTDSNKPLAETDLDRI--PMNKPVEKVGSTEEIEDESMKS 645

Query: 1267 DT----ENSIGMHLDEDSNENPLSTIETINSSDILSKKQALKMAFTLPTSCYATMAIREI 1434
            DT         +    DSNE    T     + D    + ALKMA TLP+SCYATMAIRE+
Sbjct: 646  DTNPHDSGETNLKDQTDSNEAEKDT----GNPDSEQTQMALKMALTLPSSCYATMAIREL 701

Query: 1435 LKSSTSVSYHKALN 1476
            LK+STSV+YHK LN
Sbjct: 702  LKTSTSVAYHKTLN 715


>ref|XP_006471920.1| PREDICTED: multisubstrate pseudouridine synthase 7-like isoform X1
            [Citrus sinensis]
          Length = 739

 Score =  579 bits (1492), Expect = e-162
 Identities = 304/502 (60%), Positives = 365/502 (72%), Gaps = 17/502 (3%)
 Frame = +1

Query: 22   FLRFNLYKENKDTQEALGLIGKMLGVNQRSFGFAGTKDKRSVSTQRVTIFKQRAKRLSEL 201
            FLRF+LYKENKDTQEALGLI KMLG+  RSFGFAGTKDKRSVSTQRVT+FKQRA +L+ L
Sbjct: 238  FLRFHLYKENKDTQEALGLISKMLGILPRSFGFAGTKDKRSVSTQRVTVFKQRASKLAAL 297

Query: 202  NSRMFGIKVGDFCYVNEGLVLGQLTGNHFTITLRGISADSEDIIKEATDSLWRNGFINYY 381
            N R+ GI++GDFCYV EGL+LGQL GN FTITLRG+  DSED+IK + +SL RNGFINY+
Sbjct: 298  NKRLIGIRLGDFCYVKEGLLLGQLLGNRFTITLRGVVVDSEDVIKASANSLGRNGFINYF 357

Query: 382  GLQRFGSGSVPTHLVGAALLKGEWKTAASLILDPREGERPIVREAREYYKEHGDVDLTLK 561
            GLQRFGSGSVPTHLVGA LL+GEWK+A  +ILDPREGER  + +AREYYKE  D+D TL+
Sbjct: 358  GLQRFGSGSVPTHLVGATLLRGEWKSAVKMILDPREGERNEISKAREYYKETDDIDGTLR 417

Query: 562  KLPRHLVAERSILQCLKKFPGNYLQALKTIPRTLRMMYVHSYQSYLWNHAASMRVQKYGI 741
            KLPRHLVAER+ILQCLKK PGNYLQALK IPRTLRMMYVHSYQS+LWNHAAS RVQK+G 
Sbjct: 418  KLPRHLVAERAILQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSFLWNHAASARVQKHGT 477

Query: 742  SQVVLGDLVLCK-----EVLPTVCDSSEHE-XXXXXXXXXXXXXXXXXXXXXXVQFVKAV 903
              VV+GDLV CK     + L  V    E+E                          VK V
Sbjct: 478  EHVVVGDLVFCKGDDTEKELGCVNPEFEYESSNDADDSSHLDEVPETDHPDGRHNLVKTV 537

Query: 904  DSEDLLKGHYTFEDVVLPLPGSRIRYPTNDIANVYHDLAKKDGITLTESVHGAKEFSISS 1083
             +ED+  G YT +DVVLPLPGSR+ YP ND+A VYH LA+KDGI LTES+H  KEFSI+S
Sbjct: 538  TAEDINSGKYTIDDVVLPLPGSRVIYPMNDVAEVYHHLAEKDGINLTESLHNVKEFSITS 597

Query: 1084 MKGAYRQVFQRPIDFVWELVDYTNDNLPLAETDLNIL--EKAANMTQNEVHVDG------ 1239
            M G YR+VFQ+P+DF WEL+ Y + N PLAETDL+ +  +K AN+ + E  V G      
Sbjct: 598  MTGNYRRVFQKPMDFEWELLTYIDGNKPLAETDLDKIAKDKLANIVKEEEAVCGNKKKDP 657

Query: 1240 -ICSSQIRTSDTENSIGMHLDED--SNENPLSTIETINSSDILSKKQALKMAFTLPTSCY 1410
              C  Q  +   +  +    +E   + E     +E++  +D   K+ ALK+  TLP+SCY
Sbjct: 658  SDCMKQSESLSKDIKLSTENNEAACAKEVKQPHVESVCGADSQGKQMALKLGLTLPSSCY 717

Query: 1411 ATMAIREILKSSTSVSYHKALN 1476
            ATMAIRE+LK+STSV++HK LN
Sbjct: 718  ATMAIRELLKTSTSVAFHKTLN 739


>emb|CBI34194.3| unnamed protein product [Vitis vinifera]
          Length = 693

 Score =  579 bits (1492), Expect = e-162
 Identities = 308/504 (61%), Positives = 366/504 (72%), Gaps = 19/504 (3%)
 Frame = +1

Query: 22   FLRFNLYKENKDTQEALGLIGKMLGVNQRSFGFAGTKDKRSVSTQRVTIFKQRAKRLSEL 201
            FLRF+LYKENKDTQEA+GLIGKMLG+  RSFGFAGTKDKRSVSTQRVT+FKQ A RL+ L
Sbjct: 190  FLRFHLYKENKDTQEAIGLIGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFKQHANRLAAL 249

Query: 202  NSRMFGIKVGDFCYVNEGLVLGQLTGNHFTITLRGISADSEDIIKEATDSLWRNGFINYY 381
            N R+ GIKVGDFC+V EGLVLGQL GN FTITLRG+ ADSE+ IK + D+L R GFINY+
Sbjct: 250  NERLIGIKVGDFCHVREGLVLGQLLGNRFTITLRGVVADSEETIKASADALGRLGFINYF 309

Query: 382  GLQRFGSGSVPTHLVGAALLKGEWKTAASLILDPREGERPIVREAREYYKEHGDVDLTLK 561
            GLQRFGSGSVPTHL+GAALL+GEW+TA SLILDPREG+  ++ +AREYYKE  D++ TL+
Sbjct: 310  GLQRFGSGSVPTHLIGAALLRGEWETAVSLILDPREGD-ILLLKAREYYKESDDIEGTLR 368

Query: 562  KLPRHLVAERSILQCLKKFPGNYLQALKTIPRTLRMMYVHSYQSYLWNHAASMRVQKYGI 741
            + PRHLVAER+ILQCLKK+PGNYLQALK IPRTLRMMYVHSYQSYLWNHAASMRVQ YG 
Sbjct: 369  QFPRHLVAERAILQCLKKYPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASMRVQNYGT 428

Query: 742  SQVVLGDLVLCK----EVLPTVCDSSEHEXXXXXXXXXXXXXXXXXXXXXXVQF--VKAV 903
             QVVLGDLV CK    E +  V +S   +                       +   VKA+
Sbjct: 429  KQVVLGDLVYCKGDNAEKVTRVVNSEFDDDGCSDAFDSSHFDEISETDLPEERNDPVKAL 488

Query: 904  DSEDLLKGHYTFEDVVLPLPGSRIRYPTNDIANVYHDLAKKDGITLTESVHGAKEFSISS 1083
            D+EDLL G+YT +DVVLPLPGSR  YPTNDIA VYHD AKKD I+LTES H  KEFSI++
Sbjct: 489  DAEDLLTGNYTIDDVVLPLPGSRAIYPTNDIAQVYHDFAKKDAISLTESAHSVKEFSITN 548

Query: 1084 MKGAYRQVFQRPIDFVWELVDYTNDNLPLAETD---------LNILEKAANMTQNEVHVD 1236
            M G +R+VFQ+PIDF WEL+ YT  N+PLAETD          NI+    +   NE    
Sbjct: 549  MTGGFRRVFQKPIDFEWELLTYTEGNIPLAETDWDKITKSKPSNIIGGEDSRNGNEKENS 608

Query: 1237 GICSSQIRTSDTENSIGMHLDEDS----NENPLSTIETINSSDILSKKQALKMAFTLPTS 1404
              C  Q  +   E+++ +  D +      E  L  +E    S     ++ALK++FTLP S
Sbjct: 609  FQCMKQ--SESFEHNVNLSTDNNEPNGVTEIGLPQVEPQFESGAPEAQRALKLSFTLPAS 666

Query: 1405 CYATMAIREILKSSTSVSYHKALN 1476
            CYATMAIRE+LK+STSV++ K LN
Sbjct: 667  CYATMAIRELLKTSTSVAFQKTLN 690


>ref|XP_006382775.1| hypothetical protein POPTR_0005s05300g [Populus trichocarpa]
            gi|550338143|gb|ERP60572.1| hypothetical protein
            POPTR_0005s05300g [Populus trichocarpa]
          Length = 752

 Score =  578 bits (1490), Expect = e-162
 Identities = 296/503 (58%), Positives = 363/503 (72%), Gaps = 18/503 (3%)
 Frame = +1

Query: 22   FLRFNLYKENKDTQEALGLIGKMLGVNQRSFGFAGTKDKRSVSTQRVTIFKQRAKRLSEL 201
            FLRF+LYKENKDTQEALG+IGKMLG+  +SFGFAGTKDKR+VSTQRVT+FKQ+A RL+ L
Sbjct: 249  FLRFHLYKENKDTQEALGIIGKMLGIQSKSFGFAGTKDKRAVSTQRVTVFKQQASRLAAL 308

Query: 202  NSRMFGIKVGDFCYVNEGLVLGQLTGNHFTITLRGISADSEDIIKEATDSLWRNGFINYY 381
            N R+ GIKVGDFC+V EGL+LG+L GN FT+TLRG+ ADSED IK A DSL R+GFINY+
Sbjct: 309  NDRLIGIKVGDFCHVKEGLLLGRLLGNRFTVTLRGVIADSEDTIKAAADSLGRHGFINYF 368

Query: 382  GLQRFGSGSVPTHLVGAALLKGEWKTAASLILDPREGE-----RPIVREAREYYKEHGDV 546
            GLQRFG+GSVPTHL+GAALL+GEWKTA S+ILDPREG+       ++R+AREYYKE  D+
Sbjct: 369  GLQRFGTGSVPTHLIGAALLRGEWKTAVSMILDPREGDILLLFPYVIRKAREYYKESNDI 428

Query: 547  DLTLKKLPRHLVAERSILQCLKKFPGNYLQALKTIPRTLRMMYVHSYQSYLWNHAASMRV 726
            + TL++LPRHLVAER++LQCLKK PG+YLQA+K IPRTLRMMYVH YQSYLWNHAAS RV
Sbjct: 429  EGTLRQLPRHLVAERAVLQCLKKCPGDYLQAMKAIPRTLRMMYVHGYQSYLWNHAASERV 488

Query: 727  QKYGISQVVLGDLVLCK------EVLPTVCDSSEHEXXXXXXXXXXXXXXXXXXXXXXVQ 888
            QKYG  QV+LGDLV CK      E +    + ++                          
Sbjct: 489  QKYGFDQVLLGDLVYCKGDDSEKETVGVNSECNDDNCDDTYDCSHLDETSGTDLLERKNT 548

Query: 889  FVKAVDSEDLLKGHYTFEDVVLPLPGSRIRYPTNDIANVYHDLAKKDGITLTESVHGAKE 1068
             VK V  ED+  G+YT +DVVLP+PGSR+ +PTN+IA VYHDLAKKD I LTESVH  KE
Sbjct: 549  LVKVVTVEDMSTGNYTVDDVVLPMPGSRVIFPTNEIAKVYHDLAKKDAINLTESVHRVKE 608

Query: 1069 FSISSMKGAYRQVFQRPIDFVWELVDYTNDNLPLAETDLNILEKAANMTQNEVHVDGICS 1248
            FSI+SM G+YR+VFQ+P+DF WEL+ Y + N PLAETDL+ + K  +    +    G   
Sbjct: 609  FSITSMTGSYRRVFQKPLDFEWELLTYNDSNKPLAETDLDKISKTGSTNIIKQEEQGKGD 668

Query: 1249 SQIRTSD-------TENSIGMHLDEDSNENPLSTIETINSSDILSKKQALKMAFTLPTSC 1407
                 SD       + NSI +  D +         E ++ S+    + ALK++ TLP SC
Sbjct: 669  EDNDLSDCTKLPVCSRNSIALSSDTNEESEREVESEQVSGSNWQETQMALKLSLTLPASC 728

Query: 1408 YATMAIREILKSSTSVSYHKALN 1476
            YATMAIRE+LK+STSV+YHK LN
Sbjct: 729  YATMAIRELLKTSTSVAYHKTLN 751


>gb|EOY11113.1| Pseudouridine synthase family protein, putative isoform 1 [Theobroma
            cacao]
          Length = 763

 Score =  574 bits (1480), Expect = e-161
 Identities = 306/521 (58%), Positives = 371/521 (71%), Gaps = 36/521 (6%)
 Frame = +1

Query: 22   FLRFNLYKENKDTQEALGLIGKMLGVNQRSFGFAGTKDKRSVSTQRVTIFKQRAKRLSEL 201
            FLRF+LYKENKDTQEALGLIGKMLG+  RSFGFAGTKDKRSVSTQRVT+FKQ A RL+ L
Sbjct: 244  FLRFHLYKENKDTQEALGLIGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFKQHASRLAAL 303

Query: 202  NSRMFGIKVGDFCYVNEGLVLGQLTGNHFTITLRGISADSEDIIKEATDSLWRNGFINYY 381
            N R+ GIKVGDFCYV +  +LGQL GN FTI LRGI ADSE+ IK + +SL R+GFINY+
Sbjct: 304  NERLIGIKVGDFCYVKDDFLLGQLLGNRFTIILRGIVADSEETIKASVESLGRHGFINYF 363

Query: 382  GLQRFGSGSVPTHLVGAALLKGEWKTAASLILDPREGE-------------RPIVR---- 510
            GLQRFGSGS+PTH +GA LL+GEW+ AAS ILDPREG+             + + R    
Sbjct: 364  GLQRFGSGSIPTHRIGATLLRGEWQAAASTILDPREGDILSLTFFFPFLLGKALFRCLTT 423

Query: 511  -EAREYYKEHGDVDLTLKKLPRHLVAERSILQCLKKFPGNYLQALKTIPRTLRMMYVHSY 687
              AREYYKE GD++ TL++LPRHLVAER++LQCLKK PGNYLQALK IPRTLRMMYVHSY
Sbjct: 424  QRAREYYKETGDIEGTLRQLPRHLVAERAMLQCLKKCPGNYLQALKAIPRTLRMMYVHSY 483

Query: 688  QSYLWNHAASMRVQKYGISQVVLGDLVLCK-------EVLPTVCDSSEHEXXXXXXXXXX 846
            QSYLWNHAASMRV+KYG ++VVLGDLV CK       +V+P+  + +  E          
Sbjct: 484  QSYLWNHAASMRVEKYGSNEVVLGDLVYCKGNDAEKVKVVPSEHEDNNFEDAYDCSQLDE 543

Query: 847  XXXXXXXXXXXXVQFVKAVDSEDLLKGHYTFEDVVLPLPGSRIRYPTNDIANVYHDLAKK 1026
                           VKA+ + D+  G+YT EDVVLP+PGSRI YP NDIANVYHD+AKK
Sbjct: 544  ISGTDLPEGKN--NLVKAITAADISTGNYTIEDVVLPMPGSRIIYPVNDIANVYHDMAKK 601

Query: 1027 DGITLTESVHGAKEFSISSMKGAYRQVFQRPIDFVWELVDYTNDNLPLAETDLNILEKA- 1203
            DGI+LTESVH  KEFSI+SM G+YR+VFQ+PIDF WEL+ YT+ ++ L+ETDL+ + K  
Sbjct: 602  DGISLTESVHNIKEFSITSMTGSYRRVFQKPIDFEWELLSYTDGSIALSETDLDKIAKTK 661

Query: 1204 -ANMTQNEVHVDGICSS---------QIRTSDTENSIGMHLDEDSNENPLSTIETINSSD 1353
              N+ + E   DG             +    D + S G    E S E     I ++  S+
Sbjct: 662  PVNLVKEEKPTDGTEGQDSSDHMEHIESFEDDKKFSTGNVEVEGSREAEPPQIHSLPESN 721

Query: 1354 ILSKKQALKMAFTLPTSCYATMAIREILKSSTSVSYHKALN 1476
             L  ++ALK+AFTLP SCYATMAIRE+LK+STSV++HK LN
Sbjct: 722  SLGTQKALKLAFTLPASCYATMAIRELLKTSTSVAFHKTLN 762


>ref|XP_006577278.1| PREDICTED: multisubstrate pseudouridine synthase 7-like [Glycine max]
          Length = 690

 Score =  573 bits (1477), Expect = e-161
 Identities = 297/498 (59%), Positives = 364/498 (73%), Gaps = 13/498 (2%)
 Frame = +1

Query: 22   FLRFNLYKENKDTQEALGLIGKMLGVNQRSFGFAGTKDKRSVSTQRVTIFKQRAKRLSEL 201
            FLRF+LYKENKDT EALG+IG ML V  +SFGFAGTKDKR+V+TQRVT++KQRA RL+ L
Sbjct: 194  FLRFHLYKENKDTHEALGVIGNMLSVQPKSFGFAGTKDKRAVTTQRVTVYKQRASRLASL 253

Query: 202  NSRMFGIKVGDFCYVNEGLVLGQLTGNHFTITLRGISADSEDIIKEATDSLWRNGFINYY 381
            N R+FGIK+GDFCYV EGL LGQL GN FTITLRGI ADSEDIIK + D+L R+GFINY+
Sbjct: 254  NKRLFGIKLGDFCYVKEGLCLGQLLGNRFTITLRGIVADSEDIIKASADALGRHGFINYF 313

Query: 382  GLQRFGSGSVPTHLVGAALLKGEWKTAASLILDPREGERPIVREAREYYKEHGDVDLTLK 561
            GLQRFGSGS+PTHL+GAALL+GEWK A  +ILDPR+GE+  + +AR+YYKE  DV  TLK
Sbjct: 314  GLQRFGSGSLPTHLIGAALLQGEWKLAVDMILDPRDGEKSAIAKARKYYKESSDVVGTLK 373

Query: 562  KLPRHLVAERSILQCLKKFPGNYLQALKTIPRTLRMMYVHSYQSYLWNHAASMRVQKYGI 741
            +LPR+LVAER++LQ LK  PGNYLQALK+IPRTLRM+YVHSYQSYLWNHAAS RVQKYG 
Sbjct: 374  QLPRYLVAERAVLQTLKTSPGNYLQALKSIPRTLRMLYVHSYQSYLWNHAASKRVQKYGT 433

Query: 742  SQVVLGDLVLCKEVLP---TVCDSSEHEXXXXXXXXXXXXXXXXXXXXXXVQFVKAVDSE 912
              VVLGDLV CKE      T    SE+                       +  VK VD E
Sbjct: 434  ENVVLGDLVYCKENSTGKVTESVGSEYAEDCSGRYDSNNEDEISGEIHEEIDSVKVVDVE 493

Query: 913  DLLKGHYTFEDVVLPLPGSRIRYPTNDIANVYHDLAKKDGITLTESVHGAKEFSISSMKG 1092
            DL  G+YT +DV+LP+PGSRI+YPTN IANVY DLAKKDGI+LTESVH  ++FSI+S+ G
Sbjct: 494  DLNSGYYTIDDVILPMPGSRIKYPTNHIANVYEDLAKKDGISLTESVHNVEDFSITSITG 553

Query: 1093 AYRQVFQRPIDFVWELVDYTNDNLPLAETDLNILEKAANM----------TQNEVHVDGI 1242
             YR+VFQ+PI+F WEL+ Y++ N  L ETDL+ + K+  M           +NE   D  
Sbjct: 554  CYRRVFQKPINFEWELLTYSDSNKQLVETDLDKVNKSKPMGTVKQMGAANGKNEEAFD-- 611

Query: 1243 CSSQIRTSDTENSIGMHLDEDSNENPLSTIETINSSDILSKKQALKMAFTLPTSCYATMA 1422
            C  ++ +S+    +  + +    E  L   E+++ S     + ALK++FTLP SCYATMA
Sbjct: 612  CIRELESSNDVVKVENYSEIAGEEIKLPHDESLSGSSSQDSQIALKLSFTLPASCYATMA 671

Query: 1423 IREILKSSTSVSYHKALN 1476
            IRE+LK+STSV+YHK LN
Sbjct: 672  IRELLKTSTSVAYHKTLN 689


>ref|XP_004142573.1| PREDICTED: putative pseudouridine synthase C1A4.09-like [Cucumis
            sativus]
          Length = 719

 Score =  570 bits (1469), Expect = e-160
 Identities = 296/498 (59%), Positives = 366/498 (73%), Gaps = 13/498 (2%)
 Frame = +1

Query: 22   FLRFNLYKENKDTQEALGLIGKMLGVNQRSFGFAGTKDKRSVSTQRVTIFKQRAKRLSEL 201
            FLRF+LYKENKDTQEALGLIGKMLG+  RSFGFAGTKDKRS+STQRVT+FKQ A R++ L
Sbjct: 229  FLRFHLYKENKDTQEALGLIGKMLGIQTRSFGFAGTKDKRSISTQRVTVFKQHASRIAAL 288

Query: 202  NSRMFGIKVGDFCYVNEGLVLGQLTGNHFTITLRGISADSEDIIKEATDSLWRNGFINYY 381
            N R+ GIK+G+F Y+ EGL+LGQL GN FTITLRG+ A+SED+IK + ++L R+GFINY+
Sbjct: 289  NDRLIGIKLGNFSYIQEGLLLGQLLGNRFTITLRGVVANSEDVIKASAEALGRHGFINYF 348

Query: 382  GLQRFGSGSVPTHLVGAALLKGEWKTAASLILDPREGERPIVREAREYYKEHGDVDLTLK 561
            GLQRFGSGSVPTHLVGA+LL+GEWK A ++ILDPREG+  ++  AR+YYKE  D+D TLK
Sbjct: 349  GLQRFGSGSVPTHLVGASLLRGEWKGAVNMILDPREGDILLLMRARDYYKESDDIDGTLK 408

Query: 562  KLPRHLVAERSILQCLKKFPGNYLQALKTIPRTLRMMYVHSYQSYLWNHAASMRVQKYGI 741
            +LPR+LVAER+ILQCLKK PGNYLQALK IPRTLRMMYVHSYQSYLWNHAASMRVQKYGI
Sbjct: 409  QLPRYLVAERAILQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASMRVQKYGI 468

Query: 742  SQVVLGDLVLCKE---VLPTVCDSSEHEXXXXXXXXXXXXXXXXXXXXXXV-----QFVK 897
             +VV+GDLV CKE       V +S E+E                      +     + VK
Sbjct: 469  DKVVVGDLVYCKENHTETAAVQNSEEYEDEDCGDANSYDSCHLEEVCKLGLPTERHKLVK 528

Query: 898  AVDSEDLLKGHYTFEDVVLPLPGSRIRYPTNDIANVYHDLAKKDGITLTESVHGAKEFSI 1077
            AV + D+L G++T +DVVLPLPGSR+ YPTNDIA VY+DLA KD I+LT SVH  KEFSI
Sbjct: 529  AVTAGDVLSGNFTIDDVVLPLPGSRVLYPTNDIAEVYNDLATKDSISLTNSVHNVKEFSI 588

Query: 1078 SSMKGAYRQVFQRPIDFVWELVDYTNDNLPLAETDL-NILEKAANMTQNEVHVDGICSSQ 1254
            +SM G+YR+VFQRP D+ WEL+ Y + NLPLA++DL N+L+  +     E  +     ++
Sbjct: 589  TSMTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDLHNLLKSQSVEISKEEKIADKSKNE 648

Query: 1255 IRTSDTENSI----GMHLDEDSNENPLSTIETINSSDILSKKQALKMAFTLPTSCYATMA 1422
                 T+ S+     + L+    EN        N       + ALK++FTLP S YATMA
Sbjct: 649  DSLDSTDQSVCCKKNIQLEAGGKENE-------NGQGTQDPQMALKLSFTLPASSYATMA 701

Query: 1423 IREILKSSTSVSYHKALN 1476
            IRE+LK+STSV++HK LN
Sbjct: 702  IRELLKTSTSVAFHKTLN 719


>ref|XP_004494684.1| PREDICTED: multisubstrate pseudouridine synthase 7-like isoform X1
            [Cicer arietinum]
          Length = 698

 Score =  568 bits (1463), Expect = e-159
 Identities = 296/501 (59%), Positives = 361/501 (72%), Gaps = 16/501 (3%)
 Frame = +1

Query: 22   FLRFNLYKENKDTQEALGLIGKMLGVNQRSFGFAGTKDKRSVSTQRVTIFKQRAKRLSEL 201
            FLRF+L+KENKDTQEALG++G MLG+  RSFGFAGTKDKR+V+TQRVT++KQ+A++L+ L
Sbjct: 200  FLRFHLFKENKDTQEALGVLGNMLGIKSRSFGFAGTKDKRAVTTQRVTVYKQQARKLASL 259

Query: 202  NSRMFGIKVGDFCYVNEGLVLGQLTGNHFTITLRGISADSEDIIKEATDSLWRNGFINYY 381
            N ++FGIKVGDFCYVNEGL LGQL GN FTITLRGI ADS D IK A DSL R+GFINY+
Sbjct: 260  NEKLFGIKVGDFCYVNEGLCLGQLLGNRFTITLRGIVADSVDTIKAAADSLGRHGFINYF 319

Query: 382  GLQRFGSGSVPTHLVGAALLKGEWKTAASLILDPREGERPIVREAREYYKEHGDVDLTLK 561
            GLQRFGSGSVPTH +GAAL +GEWK A  LILDPR+GER ++ +AR+YYK+  DV  TLK
Sbjct: 320  GLQRFGSGSVPTHRIGAALFRGEWKLAVDLILDPRDGERYVIAKARKYYKDTNDVAGTLK 379

Query: 562  KLPRHLVAERSILQCLKKFPGNYLQALKTIPRTLRMMYVHSYQSYLWNHAASMRVQKYGI 741
            +LP+ LVAER++L+ LK+FPGNYLQALK+IPRTLRMMYVHSYQSYLWNHAAS RVQKYG 
Sbjct: 380  QLPQFLVAERAVLKSLKQFPGNYLQALKSIPRTLRMMYVHSYQSYLWNHAASTRVQKYGT 439

Query: 742  SQVVLGDLVLCKEVLPT----VCDSSEHEXXXXXXXXXXXXXXXXXXXXXXVQFVKAVDS 909
             QVVLGDLV CKE  P+    +  S   +                         VKAV++
Sbjct: 440  EQVVLGDLVYCKENPPSKATEIVGSECDDDCGDIYDSNIEDEIPEDIHDKSNSSVKAVNA 499

Query: 910  EDLLKGHYTFEDVVLPLPGSRIRYPTNDIANVYHDLAKKDGITLTESVHGAKEFSISSMK 1089
            EDL    YT +DV+LP+PGSR  YP NDI  VY+DL  KDGI+LTE+VH AKEFS++S+ 
Sbjct: 500  EDLNSKSYTIDDVILPMPGSRSIYPANDIVKVYNDLTNKDGISLTENVHNAKEFSMTSVT 559

Query: 1090 GAYRQVFQRPIDFVWELVDYTNDNLPLAETDLNILEKAANMTQNEVHVDGI--------- 1242
            G+YR+VFQ+PI+F WEL+ YT+ N PL ETD   L+K     +  VH  G          
Sbjct: 560  GSYRRVFQKPINFEWELLTYTDSNKPLVETD---LDKIGKSKRTNVHAVGASNGQKETTA 616

Query: 1243 --CSSQIRTSDTENSIGMHLDED-SNENPLSTIETINSSDILSKKQALKMAFTLPTSCYA 1413
              C  Q+ +SD    +    DE+ S E  L   E++  S       ALK+ FTLP+SCYA
Sbjct: 617  FDCIRQVESSDDGVKVETDYDENASKEVILPHDESVPDSSSKDSHTALKLTFTLPSSCYA 676

Query: 1414 TMAIREILKSSTSVSYHKALN 1476
            TMAIRE+LK+STSV+Y K LN
Sbjct: 677  TMAIRELLKTSTSVAYQKTLN 697


>ref|XP_006604840.1| PREDICTED: multisubstrate pseudouridine synthase 7-like isoform X2
            [Glycine max]
          Length = 676

 Score =  567 bits (1462), Expect = e-159
 Identities = 292/498 (58%), Positives = 363/498 (72%), Gaps = 13/498 (2%)
 Frame = +1

Query: 22   FLRFNLYKENKDTQEALGLIGKMLGVNQRSFGFAGTKDKRSVSTQRVTIFKQRAKRLSEL 201
            FLRF+LYKENKDT EALG+IG ML +  +SFGFAGTKDKR+V+TQRVT++KQ+A RL+ L
Sbjct: 180  FLRFHLYKENKDTHEALGVIGNMLSIQPKSFGFAGTKDKRAVTTQRVTVYKQQASRLASL 239

Query: 202  NSRMFGIKVGDFCYVNEGLVLGQLTGNHFTITLRGISADSEDIIKEATDSLWRNGFINYY 381
            N R+FGIK+GDFCYV EGL LGQL GN FTITLRGI ADSEDIIK + D+L R+GFINY+
Sbjct: 240  NKRLFGIKLGDFCYVKEGLCLGQLLGNRFTITLRGIVADSEDIIKASADALGRHGFINYF 299

Query: 382  GLQRFGSGSVPTHLVGAALLKGEWKTAASLILDPREGERPIVREAREYYKEHGDVDLTLK 561
            GLQRFGSGS+PTHL+GAALL+GEWK A  +ILDPR+GE+  + +AR+YYKE  DV  TLK
Sbjct: 300  GLQRFGSGSLPTHLIGAALLRGEWKLAVDMILDPRDGEKSAIAKARKYYKESSDVVGTLK 359

Query: 562  KLPRHLVAERSILQCLKKFPGNYLQALKTIPRTLRMMYVHSYQSYLWNHAASMRVQKYGI 741
            +LPR+LVAER++LQ LK  PGNYLQALK+IPRTLRM+YVHSYQSYLWNHAAS RVQKYG 
Sbjct: 360  QLPRYLVAERAVLQTLKTSPGNYLQALKSIPRTLRMLYVHSYQSYLWNHAASKRVQKYGT 419

Query: 742  SQVVLGDLVLCKEVLP---TVCDSSEHEXXXXXXXXXXXXXXXXXXXXXXVQFVKAVDSE 912
              VVLGDLV CKE      T    SE+                       +  VK +D+E
Sbjct: 420  ENVVLGDLVYCKENSTGKVTEFVGSEYAEDCRGRYDSNNEDEVSGEIHEEINSVKVIDAE 479

Query: 913  DLLKGHYTFEDVVLPLPGSRIRYPTNDIANVYHDLAKKDGITLTESVHGAKEFSISSMKG 1092
            DL  G YT +DV+LP+PGSR++YPTN IANVY DLAKKDGI+LTESVH  ++FSI+S+ G
Sbjct: 480  DLNSGCYTIDDVILPMPGSRVKYPTNHIANVYEDLAKKDGISLTESVHNVEDFSITSITG 539

Query: 1093 AYRQVFQRPIDFVWELVDYTNDNLPLAETDLNILEKAANMT----------QNEVHVDGI 1242
             YR+VFQ+PI+F WEL+ Y++ +  L +TDL+ + K+  M           +NE   D  
Sbjct: 540  CYRRVFQKPINFEWELLSYSDSSEQLVDTDLDKINKSKPMNTVKQMGAANGKNEEAFD-- 597

Query: 1243 CSSQIRTSDTENSIGMHLDEDSNENPLSTIETINSSDILSKKQALKMAFTLPTSCYATMA 1422
            C  ++ +SD    +  + +    E  L   E++  S     + ALK++FTLP SCYATMA
Sbjct: 598  CIRELESSDDIAKVENYSEILGEEVKLPHDESLIGSSSQDSQIALKLSFTLPASCYATMA 657

Query: 1423 IREILKSSTSVSYHKALN 1476
            IRE+LK+STSV+YHK LN
Sbjct: 658  IRELLKTSTSVAYHKTLN 675


>ref|XP_003553755.1| PREDICTED: multisubstrate pseudouridine synthase 7-like isoform X1
            [Glycine max]
          Length = 687

 Score =  567 bits (1462), Expect = e-159
 Identities = 292/498 (58%), Positives = 363/498 (72%), Gaps = 13/498 (2%)
 Frame = +1

Query: 22   FLRFNLYKENKDTQEALGLIGKMLGVNQRSFGFAGTKDKRSVSTQRVTIFKQRAKRLSEL 201
            FLRF+LYKENKDT EALG+IG ML +  +SFGFAGTKDKR+V+TQRVT++KQ+A RL+ L
Sbjct: 191  FLRFHLYKENKDTHEALGVIGNMLSIQPKSFGFAGTKDKRAVTTQRVTVYKQQASRLASL 250

Query: 202  NSRMFGIKVGDFCYVNEGLVLGQLTGNHFTITLRGISADSEDIIKEATDSLWRNGFINYY 381
            N R+FGIK+GDFCYV EGL LGQL GN FTITLRGI ADSEDIIK + D+L R+GFINY+
Sbjct: 251  NKRLFGIKLGDFCYVKEGLCLGQLLGNRFTITLRGIVADSEDIIKASADALGRHGFINYF 310

Query: 382  GLQRFGSGSVPTHLVGAALLKGEWKTAASLILDPREGERPIVREAREYYKEHGDVDLTLK 561
            GLQRFGSGS+PTHL+GAALL+GEWK A  +ILDPR+GE+  + +AR+YYKE  DV  TLK
Sbjct: 311  GLQRFGSGSLPTHLIGAALLRGEWKLAVDMILDPRDGEKSAIAKARKYYKESSDVVGTLK 370

Query: 562  KLPRHLVAERSILQCLKKFPGNYLQALKTIPRTLRMMYVHSYQSYLWNHAASMRVQKYGI 741
            +LPR+LVAER++LQ LK  PGNYLQALK+IPRTLRM+YVHSYQSYLWNHAAS RVQKYG 
Sbjct: 371  QLPRYLVAERAVLQTLKTSPGNYLQALKSIPRTLRMLYVHSYQSYLWNHAASKRVQKYGT 430

Query: 742  SQVVLGDLVLCKEVLP---TVCDSSEHEXXXXXXXXXXXXXXXXXXXXXXVQFVKAVDSE 912
              VVLGDLV CKE      T    SE+                       +  VK +D+E
Sbjct: 431  ENVVLGDLVYCKENSTGKVTEFVGSEYAEDCRGRYDSNNEDEVSGEIHEEINSVKVIDAE 490

Query: 913  DLLKGHYTFEDVVLPLPGSRIRYPTNDIANVYHDLAKKDGITLTESVHGAKEFSISSMKG 1092
            DL  G YT +DV+LP+PGSR++YPTN IANVY DLAKKDGI+LTESVH  ++FSI+S+ G
Sbjct: 491  DLNSGCYTIDDVILPMPGSRVKYPTNHIANVYEDLAKKDGISLTESVHNVEDFSITSITG 550

Query: 1093 AYRQVFQRPIDFVWELVDYTNDNLPLAETDLNILEKAANMT----------QNEVHVDGI 1242
             YR+VFQ+PI+F WEL+ Y++ +  L +TDL+ + K+  M           +NE   D  
Sbjct: 551  CYRRVFQKPINFEWELLSYSDSSEQLVDTDLDKINKSKPMNTVKQMGAANGKNEEAFD-- 608

Query: 1243 CSSQIRTSDTENSIGMHLDEDSNENPLSTIETINSSDILSKKQALKMAFTLPTSCYATMA 1422
            C  ++ +SD    +  + +    E  L   E++  S     + ALK++FTLP SCYATMA
Sbjct: 609  CIRELESSDDIAKVENYSEILGEEVKLPHDESLIGSSSQDSQIALKLSFTLPASCYATMA 668

Query: 1423 IREILKSSTSVSYHKALN 1476
            IRE+LK+STSV+YHK LN
Sbjct: 669  IRELLKTSTSVAYHKTLN 686


>gb|EMJ09385.1| hypothetical protein PRUPE_ppa020985mg [Prunus persica]
          Length = 691

 Score =  563 bits (1450), Expect = e-157
 Identities = 292/492 (59%), Positives = 362/492 (73%), Gaps = 14/492 (2%)
 Frame = +1

Query: 22   FLRFNLYKENKDTQEALGLIGKMLGVNQRSFGFAGTKDKRSVSTQRVTIFKQRAKRLSEL 201
            FLRF+LYKENKDTQEALG+I KMLG+  RSFGFAGTKDKR+V+TQRVT+FKQ A RL+ L
Sbjct: 190  FLRFHLYKENKDTQEALGIIAKMLGIQPRSFGFAGTKDKRAVTTQRVTVFKQLASRLAAL 249

Query: 202  NSRMFGIKVGDFCYVNEGLVLGQLTGNHFTITLRGISADSEDIIKEATDSLWRNGFINYY 381
            N R+ GIKVGDFCYV EGLVLGQL GN FTITLRG+ ADSED IK +  +L + GFINY+
Sbjct: 250  NDRLIGIKVGDFCYVKEGLVLGQLLGNRFTITLRGVVADSEDTIKASVIALGKQGFINYF 309

Query: 382  GLQRFGSGSVPTHLVGAALLKGEWKTAASLILDPREGE--RPIVREAREYYKEHGDVDLT 555
            GLQRFGSGSVPTHL+GA LL+GEWK+  SL LDPREG+    ++  AREYYKE  D++ T
Sbjct: 310  GLQRFGSGSVPTHLIGATLLRGEWKSTVSLFLDPREGDILLMLLGIAREYYKETNDIEGT 369

Query: 556  LKKLPRHLVAERSILQCLKKFPGNYLQALKTIPRTLRMMYVHSYQSYLWNHAASMRVQKY 735
            L++LPRHLV+E++ILQCLKK PGNYLQALK IPRTLRMMYVHSYQSYLWNHAASMRVQKY
Sbjct: 370  LRQLPRHLVSEKAILQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASMRVQKY 429

Query: 736  GISQVVLGDLVLCK--------EVLPTVCDSSEHEXXXXXXXXXXXXXXXXXXXXXXVQF 891
            G  +VVLGDLV CK        EV+ + C   +                        +  
Sbjct: 430  GTDRVVLGDLVYCKGNETEKVSEVVSSKC--VDENGNDTLDPIDLDDISGTNLPEERLNL 487

Query: 892  VKAVDSEDLLKGHYTFEDVVLPLPGSRIRYPTNDIANVYHDLAKKDGITLTESVHGAKEF 1071
            VKAV +ED+L G+YT +DVVLP+PGSR+ +P NDIA+V+HDLAKKD I+LTESVH  KEF
Sbjct: 488  VKAVTAEDILSGNYTIDDVVLPMPGSRVIFPENDIAHVFHDLAKKDAISLTESVHNVKEF 547

Query: 1072 SISSMKGAYRQVFQRPIDFVWELVDYTNDNLPLAETDLNILEKAANMTQNEVHVDGICSS 1251
            SI+SM G+YR+VFQ+P+DF WE++ Y + N PL +TD + + K    + NE   DG    
Sbjct: 548  SITSMTGSYRRVFQKPMDFEWEILKYIDGNKPLVDTDFDKIAKTKPSSLNE---DGRLHD 604

Query: 1252 QIRTSD-TENSIGMHLDED---SNENPLSTIETINSSDILSKKQALKMAFTLPTSCYATM 1419
            + + S+  +N IG+  D++   +    L   E++  ++    + ALK++FTLP SCYATM
Sbjct: 605  KTKQSECLDNDIGLQTDDNGAKAKGEELPQAESLCDTNPQETQTALKLSFTLPASCYATM 664

Query: 1420 AIREILKSSTSV 1455
            AIRE+LK+STSV
Sbjct: 665  AIRELLKTSTSV 676