BLASTX nr result

ID: Zingiber25_contig00027693 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00027693
         (1008 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002464873.1| hypothetical protein SORBIDRAFT_01g027990 [S...    47   2e-09

>ref|XP_002464873.1| hypothetical protein SORBIDRAFT_01g027990 [Sorghum bicolor]
           gi|241918727|gb|EER91871.1| hypothetical protein
           SORBIDRAFT_01g027990 [Sorghum bicolor]
          Length = 319

 Score = 47.4 bits (111), Expect(3) = 2e-09
 Identities = 28/65 (43%), Positives = 30/65 (46%), Gaps = 6/65 (9%)
 Frame = +1

Query: 394 GFPYPPLLTPNFAXXXXXXXXXXXXXXXXXXXXXXXXXXWFPQSPSG------FLPILSP 555
           GF +PP LTPNF                           WFPQSPSG      FLPILSP
Sbjct: 257 GFQHPPPLTPNFPALSPLPGTGILGPGPMPPPPSPGL--WFPQSPSGLLSPSGFLPILSP 314

Query: 556 RWRDM 570
           RWRD+
Sbjct: 315 RWRDI 319



 Score = 40.8 bits (94), Expect(3) = 2e-09
 Identities = 19/27 (70%), Positives = 23/27 (85%)
 Frame = +1

Query: 106 PRPDGPSWAESPVSAYMRYLESSLLSS 186
           P P GP+WA+SPVSAYMR LE+SL S+
Sbjct: 159 PAP-GPAWADSPVSAYMRILENSLFSA 184



 Score = 20.8 bits (42), Expect(3) = 2e-09
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = +2

Query: 224 PPRGCFPPRAHPSPCLPP 277
           PP    P  +HP P  PP
Sbjct: 208 PPHPHHPQPSHPHPPPPP 225


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